View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17908_low_3 (Length: 432)
Name: NF17908_low_3
Description: NF17908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17908_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 174; Significance: 2e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 241 - 414
Target Start/End: Complemental strand, 18695522 - 18695349
Alignment:
| Q |
241 |
acaagttccaatgcaacatccatctacgaggttctattcaaccatggtcttccaatgggaattttcccaaagggtgtaaacgagttcaacgttggtgaag |
340 |
Q |
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| T |
18695522 |
acaagttccaatgcaacatccatctacgaggttctattcaaccatggtcttccaatgggaattttcccaaagggtgtaaacgagttcaacgttggtgaag |
18695423 |
T |
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| Q |
341 |
atggtaaattctgggtacatttagatcaagcatgtaacgcaaagtttgagaatgaattgcattatgatcgaaac |
414 |
Q |
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| T |
18695422 |
atggtaaattctgggtacatttagatcaagcatgtaacgcaaagtttgagaatgaattgcattatgatcgaaac |
18695349 |
T |
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