View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17909_high_28 (Length: 258)
Name: NF17909_high_28
Description: NF17909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17909_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 48 - 246
Target Start/End: Original strand, 2731126 - 2731324
Alignment:
| Q |
48 |
aatatagactttccccacctcccatatttagcaaaaagtttccataactcttatcatttttacctcatcctagaagttactgaagaagaaggggatggta |
147 |
Q |
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| T |
2731126 |
aatatagactttccccacctcccatatttagcaaaaagtttccataactcttatcatttttacctcatcttaaaagttagtgaagaagaaggggatggta |
2731225 |
T |
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| Q |
148 |
acctgatcaagattatgcacataccctttcctccttgtcgggtgtgcatttctcgccttttaaaaaacccatatggaccccttttcccctttgcttctc |
246 |
Q |
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|||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||| |
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| T |
2731226 |
acctgatcaagattattcacataacctttcctccttgtcgggtgtgcatttctcgccttttaaaaaacccatatgggccccttttctcctttgtttctc |
2731324 |
T |
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