View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17909_low_23 (Length: 308)
Name: NF17909_low_23
Description: NF17909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17909_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 44 - 299
Target Start/End: Complemental strand, 10069266 - 10069011
Alignment:
| Q |
44 |
attacaaacataaacaaaataaataatgaaattggataatgattttatagccatgcagcacttatagtcatacataaaatagcttaccnnnnnnnctagt |
143 |
Q |
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| T |
10069266 |
attacaaacataaacaacctaaataatgaaattggataatcattttatagccatgcaccacttatagtcatacataaaatagcttacctttttttctagt |
10069167 |
T |
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| Q |
144 |
tatgtgtgaactcaaaaattctaatttcaagatggattttgcagggttgcagtgaattttctgttgttcaagtaaagtgtatttcctataaagcatgact |
243 |
Q |
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| T |
10069166 |
tatgtgtgaactcaaaaattctaatttcaagatggatttttcagggatgcagtgaattttctgttgttcaagtaaagtgtatttcctataaagcatgact |
10069067 |
T |
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| Q |
244 |
acaaatgaaaagaaatttgtgaggtttgtaatgttattttagcatcacaggttctg |
299 |
Q |
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|||||||||||||||||||||||||||| | |||||||||||||||||| |||||| |
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| T |
10069066 |
acaaatgaaaagaaatttgtgaggtttgcagtgttattttagcatcacatgttctg |
10069011 |
T |
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