View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17909_low_33 (Length: 254)
Name: NF17909_low_33
Description: NF17909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17909_low_33 |
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Alignment Details
Target: chr2 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 33281755 - 33281923
Alignment:
| Q |
53 |
gctactaatggaattgtttaactaccc-aaatcggtggaattcatgcaaggggaataactacaaaagagaatgtcttacaaaggnnnnnnnnttgttaca |
151 |
Q |
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| T |
33281755 |
gctactaatggaattgtttaactaccccaaatcggtggaattcatgcaaggggaataactacaaatgagaatgtcttacaaaggaaaaaaa-ttgttaca |
33281853 |
T |
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| Q |
152 |
actaagtcaaaagaagtataataagcttgatgtgcaagaaggcctgcacatttaagtgcatttcagtcgg |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33281854 |
actaagtcaaaagaagtataataagcttgatgtgcaagaaggcctgcacatttaagtgcatttcagtcgg |
33281923 |
T |
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