View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1790_low_5 (Length: 408)

Name: NF1790_low_5
Description: NF1790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1790_low_5
NF1790_low_5
[»] chr8 (48 HSPs)
chr8 (207-408)||(32923620-32923820)
chr8 (9-95)||(32923425-32923511)
chr8 (300-408)||(10837155-10837262)
chr8 (309-408)||(34181448-34181547)
chr8 (311-408)||(7050841-7050938)
chr8 (307-408)||(42216572-42216673)
chr8 (309-408)||(17696608-17696707)
chr8 (314-408)||(2056723-2056817)
chr8 (310-408)||(26695722-26695820)
chr8 (311-408)||(27696696-27696793)
chr8 (309-408)||(10495720-10495819)
chr8 (310-408)||(7678557-7678655)
chr8 (311-408)||(9855307-9855404)
chr8 (310-394)||(30794806-30794890)
chr8 (309-408)||(2705455-2705554)
chr8 (310-369)||(41441413-41441472)
chr8 (303-369)||(2232724-2232790)
chr8 (310-408)||(37406188-37406286)
chr8 (308-367)||(4528973-4529032)
chr8 (310-408)||(7230284-7230384)
chr8 (307-408)||(27696983-27697084)
chr8 (311-408)||(43857463-43857560)
chr8 (311-408)||(10496006-10496103)
chr8 (329-408)||(43857771-43857850)
chr8 (302-408)||(4528632-4528738)
chr8 (310-408)||(7050468-7050566)
chr8 (313-369)||(42686346-42686402)
chr8 (314-365)||(9855666-9855717)
chr8 (314-369)||(15293918-15293973)
chr8 (314-369)||(15474287-15474342)
chr8 (309-408)||(30795094-30795193)
chr8 (307-365)||(2705159-2705217)
chr8 (306-363)||(17696962-17697019)
chr8 (309-365)||(10837528-10837584)
chr8 (309-408)||(26695406-26695505)
chr8 (314-365)||(42686026-42686077)
chr8 (314-369)||(44204497-44204552)
chr8 (304-369)||(41441629-41441694)
chr8 (311-408)||(2232939-2233035)
chr8 (329-365)||(32924051-32924087)
chr8 (307-369)||(15293001-15293063)
chr8 (307-369)||(15473370-15473432)
chr8 (312-361)||(32539138-32539187)
chr8 (336-365)||(37405898-37405927)
chr8 (379-408)||(41441453-41441482)
chr8 (329-365)||(2057083-2057119)
chr8 (160-192)||(32923577-32923609)
chr8 (309-369)||(44203448-44203508)
[»] chr4 (84 HSPs)
chr4 (309-408)||(51892661-51892760)
chr4 (298-408)||(47690278-47690389)
chr4 (305-408)||(321963-322065)
chr4 (304-401)||(15168906-15169003)
chr4 (305-408)||(13198967-13199070)
chr4 (310-408)||(888066-888164)
chr4 (310-408)||(16335055-16335153)
chr4 (310-408)||(45311195-45311293)
chr4 (310-408)||(40147350-40147447)
chr4 (311-408)||(41965455-41965552)
chr4 (311-408)||(42496245-42496342)
chr4 (309-401)||(8444980-8445072)
chr4 (311-408)||(23205699-23205795)
chr4 (311-408)||(46008940-46009035)
chr4 (310-408)||(49263873-49263971)
chr4 (305-408)||(39210572-39210675)
chr4 (310-408)||(35377975-35378073)
chr4 (311-408)||(32328061-32328158)
chr4 (309-369)||(31317582-31317642)
chr4 (306-369)||(919173-919236)
chr4 (313-408)||(44589028-44589123)
chr4 (308-366)||(32384092-32384150)
chr4 (311-369)||(53940699-53940757)
chr4 (311-368)||(45848628-45848685)
chr4 (313-369)||(10616464-10616520)
chr4 (313-365)||(43980134-43980186)
chr4 (311-408)||(52096856-52096955)
chr4 (309-408)||(1922778-1922877)
chr4 (301-408)||(32384220-32384327)
chr4 (306-369)||(42207862-42207924)
chr4 (311-369)||(5813772-5813830)
chr4 (314-408)||(5814091-5814185)
chr4 (310-408)||(47690607-47690705)
chr4 (309-365)||(51716483-51716539)
chr4 (305-408)||(29526243-29526346)
chr4 (300-408)||(43561798-43561904)
chr4 (310-408)||(1613940-1614038)
chr4 (307-369)||(1614264-1614326)
chr4 (310-408)||(32328350-32328448)
chr4 (314-408)||(42495933-42496027)
chr4 (310-408)||(40005413-40005512)
chr4 (311-408)||(31317258-31317354)
chr4 (308-408)||(43562009-43562109)
chr4 (313-408)||(43979276-43979371)
chr4 (309-408)||(49264189-49264288)
chr4 (311-369)||(13086609-13086666)
chr4 (310-408)||(46008546-46008644)
chr4 (311-408)||(45311551-45311648)
chr4 (311-408)||(51892948-51893045)
chr4 (311-408)||(18436790-18436886)
chr4 (311-408)||(40147583-40147679)
chr4 (309-369)||(44098763-44098823)
chr4 (310-365)||(28692952-28693007)
chr4 (306-365)||(28693252-28693311)
chr4 (306-408)||(8444652-8444754)
chr4 (334-408)||(13199320-13199394)
chr4 (310-408)||(15169289-15169387)
chr4 (330-408)||(42208115-42208193)
chr4 (329-408)||(45226323-45226401)
chr4 (314-408)||(52096569-52096663)
chr4 (310-408)||(42598909-42599006)
chr4 (305-341)||(11021630-11021666)
chr4 (301-408)||(23205980-23206085)
chr4 (329-408)||(40005729-40005807)
chr4 (314-369)||(49148170-49148225)
chr4 (350-408)||(8444944-8445002)
chr4 (350-408)||(15168981-15169039)
chr4 (310-407)||(40087199-40087296)
chr4 (311-365)||(51716121-51716175)
chr4 (307-364)||(30560661-30560718)
chr4 (312-365)||(41965142-41965195)
chr4 (336-408)||(321673-321745)
chr4 (309-365)||(19842775-19842831)
chr4 (310-361)||(1922493-1922544)
chr4 (301-407)||(55604119-55604223)
chr4 (311-341)||(18437138-18437168)
chr4 (308-366)||(55601199-55601257)
chr4 (303-352)||(10616572-10616621)
chr4 (379-408)||(11021375-11021404)
chr4 (379-408)||(31317572-31317601)
chr4 (336-369)||(45226040-45226073)
chr4 (379-408)||(53940689-53940718)
chr4 (314-366)||(19842211-19842263)
chr4 (310-366)||(40722335-40722391)
[»] chr1 (85 HSPs)
chr1 (305-408)||(38717646-38717749)
chr1 (311-408)||(1342432-1342529)
chr1 (311-408)||(2930961-2931058)
chr1 (311-408)||(5132647-5132744)
chr1 (311-408)||(45950903-45951000)
chr1 (309-408)||(36465934-36466033)
chr1 (310-408)||(17077325-17077423)
chr1 (310-408)||(25378923-25379021)
chr1 (310-408)||(28486937-28487035)
chr1 (306-408)||(36302423-36302525)
chr1 (310-408)||(47647857-47647955)
chr1 (301-408)||(5904803-5904911)
chr1 (300-408)||(23253314-23253422)
chr1 (309-408)||(39758949-39759048)
chr1 (309-408)||(39759237-39759335)
chr1 (309-408)||(39764303-39764402)
chr1 (310-408)||(6782877-6782975)
chr1 (306-408)||(37351249-37351351)
chr1 (311-408)||(39524269-39524368)
chr1 (301-408)||(15875130-15875236)
chr1 (310-408)||(28838418-28838517)
chr1 (311-369)||(1366628-1366686)
chr1 (311-408)||(32486859-32486957)
chr1 (310-408)||(40124780-40124878)
chr1 (310-408)||(2730736-2730833)
chr1 (313-408)||(38872824-38872920)
chr1 (312-408)||(39950514-39950610)
chr1 (309-369)||(47671998-47672058)
chr1 (311-408)||(49628127-49628223)
chr1 (311-408)||(30056927-30057025)
chr1 (310-408)||(44519339-44519437)
chr1 (311-408)||(52346229-52346326)
chr1 (312-408)||(44396060-44396156)
chr1 (309-408)||(50755655-50755754)
chr1 (310-408)||(5132425-5132523)
chr1 (313-408)||(14556018-14556112)
chr1 (310-408)||(28486619-28486717)
chr1 (307-361)||(32005713-32005767)
chr1 (309-408)||(32487178-32487277)
chr1 (306-408)||(1342749-1342851)
chr1 (309-408)||(2937094-2937192)
chr1 (310-368)||(38459350-38459408)
chr1 (310-408)||(38872509-38872607)
chr1 (307-407)||(5905050-5905150)
chr1 (308-408)||(23253642-23253742)
chr1 (309-408)||(40125099-40125198)
chr1 (310-408)||(28838100-28838198)
chr1 (310-408)||(47648173-47648271)
chr1 (311-408)||(6782566-6782663)
chr1 (308-369)||(25378685-25378746)
chr1 (305-366)||(29715413-29715473)
chr1 (311-408)||(50755976-50756073)
chr1 (312-368)||(14291603-14291659)
chr1 (305-365)||(44396401-44396461)
chr1 (312-408)||(47672260-47672356)
chr1 (310-408)||(1366301-1366400)
chr1 (329-408)||(14556329-14556408)
chr1 (309-408)||(37350938-37351037)
chr1 (313-408)||(38019281-38019376)
chr1 (309-365)||(2731067-2731123)
chr1 (309-369)||(36726432-36726492)
chr1 (309-369)||(38456147-38456207)
chr1 (314-369)||(16389253-16389308)
chr1 (305-368)||(39096641-39096704)
chr1 (311-365)||(29548581-29548635)
chr1 (305-369)||(29548849-29548911)
chr1 (329-361)||(29721449-29721481)
chr1 (329-361)||(36302791-36302823)
chr1 (329-365)||(36466295-36466331)
chr1 (305-365)||(39950226-39950286)
chr1 (334-365)||(30057287-30057318)
chr1 (310-369)||(38018999-38019057)
chr1 (310-365)||(44519698-44519753)
chr1 (310-365)||(49628451-49628506)
chr1 (309-367)||(8679820-8679878)
chr1 (378-408)||(29548839-29548869)
chr1 (379-408)||(1366618-1366647)
chr1 (379-408)||(25378727-25378756)
chr1 (379-408)||(38291314-38291343)
chr1 (380-408)||(2937012-2937040)
chr1 (309-365)||(16813746-16813802)
chr1 (329-365)||(17077688-17077724)
chr1 (309-365)||(21623453-21623509)
chr1 (309-341)||(38291350-38291382)
chr1 (308-364)||(51031952-51032008)
[»] chr5 (68 HSPs)
chr5 (310-408)||(20166382-20166480)
chr5 (310-408)||(26408636-26408734)
chr5 (309-408)||(27858386-27858485)
chr5 (306-408)||(25945324-25945426)
chr5 (306-408)||(39412435-39412537)
chr5 (306-408)||(5907255-5907356)
chr5 (311-408)||(8343345-8343442)
chr5 (311-408)||(15442935-15443032)
chr5 (312-408)||(16969001-16969097)
chr5 (313-408)||(18705525-18705620)
chr5 (309-408)||(23910293-23910392)
chr5 (310-408)||(23592479-23592577)
chr5 (311-408)||(9176958-9177055)
chr5 (311-408)||(22619447-22619544)
chr5 (307-408)||(32792359-32792460)
chr5 (309-401)||(2268225-2268317)
chr5 (310-408)||(973825-973924)
chr5 (307-408)||(8144669-8144770)
chr5 (309-408)||(13198199-13198299)
chr5 (308-404)||(17964646-17964742)
chr5 (311-408)||(27858624-27858720)
chr5 (312-408)||(11062634-11062730)
chr5 (305-408)||(4716812-4716915)
chr5 (309-408)||(11062346-11062445)
chr5 (310-369)||(23592807-23592866)
chr5 (310-408)||(5214265-5214363)
chr5 (311-369)||(5214592-5214650)
chr5 (311-408)||(18036538-18036635)
chr5 (314-407)||(39283103-39283196)
chr5 (314-369)||(13197912-13197967)
chr5 (310-408)||(3023397-3023491)
chr5 (314-408)||(26408953-26409047)
chr5 (308-369)||(18673907-18673968)
chr5 (309-408)||(31912701-31912800)
chr5 (309-408)||(38245057-38245156)
chr5 (311-408)||(5950770-5950866)
chr5 (311-408)||(18036219-18036316)
chr5 (311-408)||(23910616-23910713)
chr5 (311-408)||(39412152-39412249)
chr5 (314-365)||(3578002-3578053)
chr5 (329-408)||(4717129-4717208)
chr5 (329-408)||(17964965-17965044)
chr5 (301-408)||(18674164-18674271)
chr5 (307-408)||(21747671-21747769)
chr5 (329-408)||(38789967-38790046)
chr5 (310-408)||(2268570-2268668)
chr5 (311-365)||(8145031-8145085)
chr5 (311-365)||(22619792-22619846)
chr5 (312-365)||(8343043-8343096)
chr5 (339-408)||(3578274-3578341)
chr5 (332-408)||(9177175-9177251)
chr5 (308-368)||(32780863-32780923)
chr5 (314-365)||(974185-974236)
chr5 (309-408)||(4620986-4621085)
chr5 (309-408)||(25945643-25945742)
chr5 (350-408)||(2268295-2268353)
chr5 (311-365)||(30492198-30492252)
chr5 (310-358)||(13667384-13667432)
chr5 (309-365)||(30491891-30491947)
chr5 (309-341)||(38790272-38790304)
chr5 (310-365)||(34929537-34929592)
chr5 (315-366)||(36322924-36322975)
chr5 (311-369)||(38244854-38244910)
chr5 (311-361)||(2033738-2033788)
chr5 (378-408)||(38244890-38244920)
chr5 (308-365)||(15440517-15440574)
chr5 (380-408)||(18674085-18674113)
chr5 (333-369)||(21747986-21748022)
[»] chr3 (66 HSPs)
chr3 (310-408)||(51754213-51754311)
chr3 (311-408)||(47358150-47358247)
chr3 (311-408)||(27957460-27957557)
chr3 (311-408)||(44398192-44398289)
chr3 (304-408)||(34682272-34682378)
chr3 (305-408)||(38443311-38443414)
chr3 (309-408)||(40036960-40037059)
chr3 (309-408)||(21441253-21441353)
chr3 (312-408)||(51761084-51761180)
chr3 (312-408)||(54803320-54803416)
chr3 (305-408)||(11692474-11692577)
chr3 (309-408)||(51436996-51437095)
chr3 (309-408)||(54089838-54089937)
chr3 (309-408)||(3017486-3017587)
chr3 (310-408)||(35565041-35565138)
chr3 (310-369)||(29352403-29352462)
chr3 (311-369)||(16222832-16222890)
chr3 (311-369)||(23461186-23461244)
chr3 (311-365)||(44638623-44638677)
chr3 (311-408)||(16732234-16732331)
chr3 (311-408)||(49665329-49665426)
chr3 (312-369)||(19988223-19988280)
chr3 (311-408)||(21560798-21560895)
chr3 (311-408)||(47982363-47982459)
chr3 (311-408)||(47991650-47991746)
chr3 (311-408)||(48000937-48001033)
chr3 (311-408)||(48010224-48010320)
chr3 (311-366)||(31705457-31705512)
chr3 (302-407)||(26920896-26921001)
chr3 (324-408)||(19988153-19988237)
chr3 (313-369)||(26050499-26050555)
chr3 (308-408)||(44397922-44398022)
chr3 (312-408)||(47358472-47358568)
chr3 (309-408)||(19987833-19987932)
chr3 (309-408)||(29352638-29352737)
chr3 (309-408)||(40790807-40790905)
chr3 (314-369)||(52836632-52836687)
chr3 (311-362)||(55328800-55328851)
chr3 (310-408)||(21440967-21441065)
chr3 (307-408)||(21561115-21561217)
chr3 (310-408)||(35565387-35565485)
chr3 (311-408)||(40393460-40393557)
chr3 (305-406)||(30427389-30427490)
chr3 (312-408)||(23460942-23461038)
chr3 (308-408)||(51753892-51753992)
chr3 (309-408)||(11692153-11692252)
chr3 (308-408)||(16222472-16222571)
chr3 (309-408)||(44638411-44638510)
chr3 (310-408)||(49665611-49665710)
chr3 (310-369)||(54090164-54090223)
chr3 (311-408)||(3017251-3017349)
chr3 (311-365)||(33092336-33092389)
chr3 (309-365)||(27957820-27957876)
chr3 (309-365)||(33092032-33092088)
chr3 (310-408)||(47982644-47982742)
chr3 (310-408)||(47991931-47992029)
chr3 (310-408)||(48001218-48001316)
chr3 (310-408)||(48010505-48010603)
chr3 (311-408)||(29015718-29015815)
chr3 (314-358)||(3192121-3192165)
chr3 (329-365)||(16731937-16731973)
chr3 (308-364)||(40393742-40393798)
chr3 (378-408)||(29016011-29016041)
chr3 (311-341)||(51760822-51760852)
chr3 (379-408)||(54090154-54090183)
chr3 (324-368)||(47429559-47429603)
[»] scaffold0302 (2 HSPs)
scaffold0302 (311-408)||(14125-14222)
scaffold0302 (310-408)||(14441-14539)
[»] chr6 (50 HSPs)
chr6 (311-408)||(9565996-9566093)
chr6 (310-408)||(33360446-33360544)
chr6 (311-408)||(17203865-17203962)
chr6 (311-408)||(21905375-21905472)
chr6 (311-408)||(33243169-33243266)
chr6 (308-408)||(6389909-6390009)
chr6 (310-408)||(5997192-5997290)
chr6 (309-408)||(10143209-10143307)
chr6 (311-408)||(2793034-2793131)
chr6 (311-408)||(22695555-22695652)
chr6 (307-408)||(33706117-33706218)
chr6 (311-403)||(1827056-1827148)
chr6 (310-404)||(605476-605570)
chr6 (311-408)||(16120401-16120498)
chr6 (311-408)||(16409057-16409154)
chr6 (313-408)||(6535695-6535791)
chr6 (316-408)||(32219162-32219254)
chr6 (300-399)||(16120536-16120635)
chr6 (303-365)||(3199299-3199361)
chr6 (310-408)||(12395662-12395760)
chr6 (310-408)||(14631047-14631144)
chr6 (309-408)||(6390229-6390328)
chr6 (310-408)||(583980-584078)
chr6 (304-369)||(21003127-21003192)
chr6 (311-408)||(33705801-33705898)
chr6 (314-408)||(2182225-2182319)
chr6 (311-408)||(21002768-21002865)
chr6 (329-408)||(5997508-5997588)
chr6 (308-408)||(605756-605858)
chr6 (309-408)||(9566360-9566459)
chr6 (310-408)||(12395979-12396078)
chr6 (310-408)||(14630812-14630911)
chr6 (309-408)||(22695902-22696001)
chr6 (309-408)||(33360766-33360865)
chr6 (329-408)||(583678-583759)
chr6 (312-365)||(6535408-6535461)
chr6 (307-408)||(33877785-33877886)
chr6 (309-365)||(5146816-5146872)
chr6 (329-408)||(32218860-32218940)
chr6 (314-369)||(3371338-3371393)
chr6 (329-408)||(17204178-17204257)
chr6 (329-408)||(33243487-33243566)
chr6 (311-408)||(21904865-21904962)
chr6 (311-367)||(12403224-12403279)
chr6 (314-369)||(14410264-14410319)
chr6 (311-365)||(3199551-3199605)
chr6 (378-408)||(33877995-33878025)
chr6 (332-365)||(14444932-14444965)
chr6 (380-408)||(5997396-5997424)
chr6 (317-369)||(12514248-12514300)
[»] chr2 (63 HSPs)
chr2 (309-408)||(4902914-4903013)
chr2 (310-408)||(40691600-40691698)
chr2 (311-408)||(42814272-42814369)
chr2 (305-408)||(970431-970534)
chr2 (313-408)||(18478609-18478704)
chr2 (309-408)||(33850451-33850550)
chr2 (310-408)||(430835-430933)
chr2 (306-408)||(3963048-3963150)
chr2 (309-408)||(4902621-4902719)
chr2 (309-408)||(4950019-4950117)
chr2 (311-408)||(32504297-32504394)
chr2 (311-408)||(34826000-34826097)
chr2 (310-404)||(9776970-9777065)
chr2 (304-369)||(2098620-2098685)
chr2 (311-408)||(4831434-4831531)
chr2 (311-408)||(11108407-11108504)
chr2 (310-408)||(32654133-32654230)
chr2 (309-408)||(14102890-14102989)
chr2 (310-408)||(14827812-14827910)
chr2 (311-408)||(8031335-8031432)
chr2 (313-401)||(18707495-18707584)
chr2 (309-369)||(16265583-16265643)
chr2 (310-369)||(45002844-45002903)
chr2 (310-408)||(18907240-18907338)
chr2 (311-369)||(32927710-32927768)
chr2 (306-408)||(32928030-32928132)
chr2 (310-408)||(39060687-39060785)
chr2 (305-408)||(5673989-5674092)
chr2 (310-369)||(41186601-41186660)
chr2 (313-408)||(9777288-9777383)
chr2 (305-368)||(9791550-9791613)
chr2 (313-368)||(28625823-28625878)
chr2 (298-408)||(41186238-41186346)
chr2 (314-408)||(18906927-18907021)
chr2 (310-408)||(40691395-40691493)
chr2 (329-408)||(11108723-11108802)
chr2 (329-408)||(32653832-32653911)
chr2 (312-407)||(430574-430668)
chr2 (312-408)||(3952230-3952326)
chr2 (308-408)||(18707839-18707939)
chr2 (314-406)||(39060409-39060501)
chr2 (309-365)||(42435008-42435064)
chr2 (309-408)||(970754-970853)
chr2 (311-350)||(19591442-19591481)
chr2 (310-408)||(32503978-32504077)
chr2 (329-408)||(33850770-33850849)
chr2 (310-408)||(2098291-2098389)
chr2 (310-408)||(28625462-28625562)
chr2 (310-369)||(3951947-3952006)
chr2 (307-358)||(3963391-3963442)
chr2 (329-408)||(7900278-7900356)
chr2 (309-407)||(14827496-14827594)
chr2 (314-408)||(34825685-34825779)
chr2 (310-363)||(8031070-8031123)
chr2 (300-365)||(42813865-42813929)
chr2 (329-365)||(25263708-25263744)
chr2 (378-408)||(11278280-11278310)
chr2 (378-408)||(18707591-18707621)
chr2 (311-341)||(25251508-25251538)
chr2 (379-408)||(2098610-2098639)
chr2 (312-365)||(7907195-7907248)
chr2 (379-408)||(32927749-32927778)
chr2 (309-365)||(11277993-11278049)
[»] scaffold0009 (2 HSPs)
scaffold0009 (310-408)||(58735-58833)
scaffold0009 (311-408)||(58447-58544)
[»] chr7 (61 HSPs)
chr7 (310-408)||(31849713-31849811)
chr7 (310-408)||(39102798-39102896)
chr7 (307-408)||(6626483-6626584)
chr7 (311-408)||(10336434-10336531)
chr7 (315-408)||(24000238-24000331)
chr7 (311-408)||(24164300-24164397)
chr7 (308-408)||(31657704-31657804)
chr7 (309-408)||(6607634-6607733)
chr7 (310-408)||(19276638-19276736)
chr7 (310-408)||(38816236-38816334)
chr7 (312-408)||(21766827-21766922)
chr7 (313-408)||(47913437-47913532)
chr7 (306-408)||(1795435-1795537)
chr7 (310-407)||(8952416-8952512)
chr7 (311-408)||(35193318-35193415)
chr7 (312-408)||(36508065-36508161)
chr7 (309-408)||(21438557-21438656)
chr7 (309-408)||(39384710-39384808)
chr7 (307-369)||(48863500-48863562)
chr7 (311-408)||(2765061-2765158)
chr7 (304-369)||(47403841-47403906)
chr7 (310-408)||(26174907-26175006)
chr7 (311-369)||(41320367-41320425)
chr7 (310-408)||(18732942-18733039)
chr7 (313-369)||(38567823-38567879)
chr7 (305-408)||(44141403-44141506)
chr7 (310-408)||(17356602-17356699)
chr7 (307-369)||(21276331-21276393)
chr7 (310-408)||(21766507-21766605)
chr7 (311-408)||(6626166-6626263)
chr7 (309-369)||(5850829-5850889)
chr7 (304-408)||(18732631-18732735)
chr7 (310-408)||(38816545-38816643)
chr7 (313-408)||(47913121-47913218)
chr7 (313-365)||(11638340-11638392)
chr7 (329-408)||(41320655-41320734)
chr7 (314-408)||(21276580-21276674)
chr7 (326-408)||(39997927-39998009)
chr7 (307-408)||(8952727-8952828)
chr7 (308-408)||(19276960-19277061)
chr7 (311-408)||(47404166-47404263)
chr7 (314-369)||(18046047-18046102)
chr7 (329-408)||(26174633-26174712)
chr7 (311-365)||(6607880-6607934)
chr7 (329-365)||(31849455-31849491)
chr7 (324-368)||(38567793-38567837)
chr7 (330-365)||(21438261-21438296)
chr7 (314-367)||(19587672-19587723)
chr7 (315-365)||(24164017-24164067)
chr7 (335-408)||(39103017-39103091)
chr7 (311-408)||(35193635-35193732)
chr7 (324-368)||(47403892-47403936)
chr7 (329-365)||(48863302-48863338)
chr7 (314-365)||(17356964-17357015)
chr7 (322-369)||(31915428-31915475)
chr7 (311-361)||(23999921-23999971)
chr7 (310-363)||(2765300-2765353)
chr7 (379-408)||(5850819-5850848)
chr7 (379-408)||(41320406-41320435)
chr7 (306-363)||(47444059-47444116)
chr7 (380-408)||(35193554-35193582)
[»] scaffold0045 (2 HSPs)
scaffold0045 (309-408)||(35655-35754)
scaffold0045 (310-408)||(35333-35432)
[»] scaffold0079 (1 HSPs)
scaffold0079 (310-408)||(57707-57805)
[»] scaffold0036 (1 HSPs)
scaffold0036 (306-408)||(17152-17254)
[»] scaffold0015 (2 HSPs)
scaffold0015 (302-408)||(49708-49813)
scaffold0015 (308-408)||(50032-50132)
[»] scaffold0170 (3 HSPs)
scaffold0170 (309-369)||(5810-5870)
scaffold0170 (312-408)||(5510-5606)
scaffold0170 (379-408)||(5800-5829)
[»] scaffold0651 (2 HSPs)
scaffold0651 (309-408)||(6028-6126)
scaffold0651 (311-408)||(6344-6440)
[»] scaffold0044 (3 HSPs)
scaffold0044 (299-369)||(9574-9644)
scaffold0044 (308-408)||(9852-9952)
scaffold0044 (379-408)||(9625-9654)
[»] scaffold0185 (1 HSPs)
scaffold0185 (309-408)||(8061-8160)
[»] scaffold0275 (2 HSPs)
scaffold0275 (308-408)||(1263-1363)
scaffold0275 (310-369)||(1562-1621)
[»] scaffold0421 (1 HSPs)
scaffold0421 (312-408)||(2951-3046)
[»] scaffold1095 (1 HSPs)
scaffold1095 (308-365)||(26-83)
[»] scaffold0825 (1 HSPs)
scaffold0825 (311-408)||(1174-1271)
[»] scaffold0385 (1 HSPs)
scaffold0385 (329-408)||(12986-13064)


Alignment Details
Target: chr8 (Bit Score: 137; Significance: 2e-71; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 207 - 408
Target Start/End: Original strand, 32923620 - 32923820
Alignment:
Q  207 agggatagatgatgataaaacctactttgagatgcttcagaaaaatatgatcaattaaatttattgaatagatgatgataaaacattaaggaatattatt 306  Q
    ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||| || |    
T  32923620 agggatagatgatgataaaacctactttgagttgcttctgaacaatatgatcaattaaatttattggatagatgatgataaaacgttaaggaatactaat 32923719  T
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaa 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||        ||||||||||| |||||||||||||||||    
T  32923720 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtctctgcac-tttttttgtttggcattgatccctgcactttgtaaa 32923818  T
Q  407 aa 408  Q
    ||    
T  32923819 aa 32923820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 32923425 - 32923511
Alignment:
Q  9 gattattctacatgttgtgctacaaatacattttaaaattaaaaaattttaattgaagtatattgtagtcaatcaagagatttgctg 95  Q
    ||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32923425 gattattctacatgttgtgctacaaatacattttacaactaagaaattttaattgaagtatattgtagtcaatcaagagatttgctg 32923511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 300 - 408
Target Start/End: Original strand, 10837155 - 10837262
Alignment:
Q  300 tattattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcact 399  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||    
T  10837155 tattgtttttaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-tttttttgtttggcattggtccctgcact 10837253  T
Q  400 ttgtaaaaa 408  Q
    |||||||||    
T  10837254 ttgtaaaaa 10837262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 34181547 - 34181448
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||| ||||||    
T  34181547 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttataaaaa 34181448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 7050938 - 7050841
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| ||||||||||||    
T  7050938 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgaactttgtaaaaa 7050841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 307 - 408
Target Start/End: Complemental strand, 42216673 - 42216572
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaa 406  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||| ||||||||||||||    
T  42216673 ttaaggtttaaatgtgtcattggtccctgcactttcatcggattttggcattggtccctgcactttttttagtttggcattggtctctgcactttgtaaa 42216574  T
Q  407 aa 408  Q
    ||    
T  42216573 aa 42216572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 17696608 - 17696707
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||||||||||| ||||||||||||||||    
T  17696608 aaggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcacttttttttgtttggcattggtcactgcactttgtaaaaa 17696707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 314 - 408
Target Start/End: Original strand, 2056723 - 2056817
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||        |||||||||||||||||||||||||||||||    
T  2056723 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggttcctgcactattttttgtttggcattggtccctgcactttgtaaaaa 2056817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 26695820 - 26695722
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        |||||| ||||||||||||||||||||||||    
T  26695820 aggtttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcacttgtttttgtttggtattggtccctgcactttgtaaaaa 26695722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 27696696 - 27696793
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||| ||||||| |||||||||||||||    
T  27696696 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggccttggtccttgcactttgtaaaaa 27696793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 10495720 - 10495819
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||||    
T  10495720 aaggtttaaatatgtcattgatccctgcactttcatcagattttgacattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 10495819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 7678655 - 7678557
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  7678655 aggtttaaatgtgtcattggtcgatgcactttcatcaaattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 7678557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 9855307 - 9855404
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||        |||||||||||||| ||| ||||||||||||    
T  9855307 ggtttaaatgtgtcattggtccctgtactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtctctgtactttgtaaaaa 9855404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 310 - 394
Target Start/End: Original strand, 30794806 - 30794890
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccct 394  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||    
T  30794806 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccct 30794890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 2705554 - 2705455
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||        ||||| ||||||||| | |||||||||||||    
T  2705554 aaggtttaaatgtgtcattgatccctgcactttcatcagattttggcattggtccctgcacttttttttgtttgacattggtccatacactttgtaaaaa 2705455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 310 - 369
Target Start/End: Original strand, 41441413 - 41441472
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41441413 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 41441472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 303 - 369
Target Start/End: Original strand, 2232724 - 2232790
Alignment:
Q  303 tattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2232724 tatttttaggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcac 2232790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 37406286 - 37406188
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||    
T  37406286 aggtttaaatgtgttattggtccttgcactttgatcagattttggcattggtccctgcacttttttttgtttggcattggtccttgcactttgtaaaaa 37406188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 308 - 367
Target Start/End: Complemental strand, 4529032 - 4528973
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgc 367  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4529032 taaggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgc 4528973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 7230384 - 7230284
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac--nnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||          |||||||||||||||||| |||||||||||    
T  7230384 aggtttaaatgtgtcattgatccttgcactttcatcagattttggcattgatccctgcacttttttttttgtttggcattggtccctgtactttgtaaaa 7230285  T
Q  408 a 408  Q
    |    
T  7230284 a 7230284  T

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Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 307 - 408
Target Start/End: Complemental strand, 27697084 - 27696983
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaa 406  Q
    ||||||||||||| |||| || |||| |||| ||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||    
T  27697084 ttaaggtttaaatatgtctttagtccttgcattttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaa 27696985  T
Q  407 aa 408  Q
    ||    
T  27696984 aa 27696983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 43857463 - 43857560
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||         |||||||||||||| ||| ||||||||||||    
T  43857463 ggtttaaatgtgtcattggtccctgcactttcatcaaattttgacattggttcctgcattttattttgtttggcattggtctctgtactttgtaaaaa 43857560  T

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Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 10496103 - 10496006
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| |||| |||||||||||||||||||    
T  10496103 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattgttccctgcactttgtaaaaa 10496006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 329 - 408
Target Start/End: Complemental strand, 43857850 - 43857771
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  43857850 gtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 43857771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 302 - 408
Target Start/End: Original strand, 4528632 - 4528738
Alignment:
Q  302 ttattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcacttt 401  Q
    |||||||  ||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||| |||| ||||    
T  4528632 ttattttttggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtctctgcccttt 4528731  T
Q  402 gtaaaaa 408  Q
    |||||||    
T  4528732 gtaaaaa 4528738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 7050468 - 7050566
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| || | || |||| |||||||||||||||||||||||||||||||| |||        |||||  ||||||||||||||||||||||||    
T  7050468 aggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaa 7050566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 42686402 - 42686346
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||| |||||| ||||||||||||||||||||||| |||||| |||||||    
T  42686402 tttaaatgtgttattggttcctgcactttcatcagattttggtattggttcctgcac 42686346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 9855717 - 9855666
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||| |||| || |||||||||||||||||||||||||||||||||||||    
T  9855717 ttaaatatgtctttagtccctgcactttcatcagattttggcattggtccct 9855666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 369
Target Start/End: Complemental strand, 15293973 - 15293918
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||    
T  15293973 ttaaatgtgtcattggtccctgcactttcaccattttttggctttggtccctgcac 15293918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 369
Target Start/End: Complemental strand, 15474342 - 15474287
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||||||||||| ||  ||||||| |||||||||||||    
T  15474342 ttaaatgtgtcattggtccctgcactttcaccattttttggctttggtccctgcac 15474287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 30795193 - 30795094
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| |||| || |||| ||||||||||||||||||||||||||  |||| |||        |||||| |||||||| |||||||||||||||    
T  30795193 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattgacccctacacttttttttgtttggaattggtccttgcactttgtaaaaa 30795094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 365
Target Start/End: Original strand, 2705159 - 2705217
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||||| |||| || |||| ||||||||||||||||||||| ||||||||||    
T  2705159 ttaaggtttaaatatgtctttagtccttgcactttcatcagattttggtattggtccct 2705217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 17697019 - 17696962
Alignment:
Q  306 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtcc 363  Q
    |||| ||||||||| |||| || |||| ||||||||||||||||||||||||||||||    
T  17697019 tttatggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtcc 17696962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 10837584 - 10837528
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||| |||| || |||| |||||||| |||||||||||||||||||||||    
T  10837584 aaggtttaaatatgtctttagtccttgcacttttatcagattttggcattggtccct 10837528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 26695406 - 26695505
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||| |||||| |||| || |||| | ||||||||||| |||||||||||||||||| |||        |||||| |||||||||| |||||||||||||    
T  26695406 aaggcttaaatatgtctttagtccatccactttcatcatattttggcattggtccctacactttattttgtttggaattggtccctacactttgtaaaaa 26695505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 42686026 - 42686077
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||| ||||||| ||| ||||||||||||||||||||| |||||||||||    
T  42686026 ttaaatatgtcattagtctctgcactttcatcagattttgacattggtccct 42686077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 369
Target Start/End: Complemental strand, 44204552 - 44204497
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||| ||||||||||||||||||   ||||||||| ||||||||||||||    
T  44204552 ttaaatgtgtaattggtccctgcactttcgcaagattttggtattggtccctgcac 44204497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 369
Target Start/End: Complemental strand, 41441694 - 41441629
Alignment:
Q  304 attttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||| |||||||||| |||| || |||| ||||||||||| ||||||||| ||||||| ||||||    
T  41441694 atttttaggtttaaatatgtctttagtccttgcactttcatgagattttggtattggtctctgcac 41441629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 2233035 - 2232939
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||| || |||| ||||||||||| || ||||||||||||||||| |||        |||||| ||||||| ||||||||||||||||    
T  2233035 ggtttaaatatgtctttagtccttgcactttcattagcttttggcattggtccctacac-attttttgtttggaattggtctctgcactttgtaaaaa 2232939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 32924087 - 32924051
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||||||||||||||||| |||||||||||    
T  32924087 gtccctgcactttcatcagattttgacattggtccct 32924051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 369
Target Start/End: Original strand, 15293001 - 15293063
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||| |||||||||||||| ||||||||| ||| | ||  ||||||| |||||||||||||    
T  15293001 ttaaggcttaaatgtgtcattagtccctgcatttttaccattttttggctttggtccctgcac 15293063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 369
Target Start/End: Original strand, 15473370 - 15473432
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||| |||||||||||||| ||||||||| ||| | ||  ||||||| |||||||||||||    
T  15473370 ttaaggcttaaatgtgtcattagtccctgcatttttaccattttttggctttggtccctgcac 15473432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 32539187 - 32539138
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggt 361  Q
    |||||||| |||| || |||| ||||||||||||||||||||| ||||||    
T  32539187 gtttaaatatgtctttagtccttgcactttcatcagattttggtattggt 32539138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 365
Target Start/End: Original strand, 37405898 - 37405927
Alignment:
Q  336 cactttcatcagattttggcattggtccct 365  Q
    ||||||||||||||||||||||||||||||    
T  37405898 cactttcatcagattttggcattggtccct 37405927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 41441453 - 41441482
Alignment:
Q  379 tttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||    
T  41441453 tttggcattggtccctgcactttgtaaaaa 41441482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 2057119 - 2057083
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccct 365  Q
    |||| |||| |||||||||||||||||||||||||||    
T  2057119 gtccttgcattttcatcagattttggcattggtccct 2057083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 32923577 - 32923609
Alignment:
Q  160 gaattcaattaaaatgaaaacctgctttgagta 192  Q
    ||||||||||||||||| |||||||||||||||    
T  32923577 gaattcaattaaaatgacaacctgctttgagta 32923609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 44203448 - 44203508
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||| ||||||||||  | |||||||||||||| |  ||||||||| ||||||||||||||    
T  44203448 aaggcttaaatgtgtattcggtccctgcacttttacaagattttggtattggtccctgcac 44203508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 5e-35; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 51892661 - 51892760
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  51892661 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 51892760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 298 - 408
Target Start/End: Original strand, 47690278 - 47690389
Alignment:
Q  298 aatattatt-ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgc 396  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||        |||||||||||||||||||    
T  47690278 aatattattattaaggtttaaatgtgtcattggtccctgcactttcattagattatggcattggtccctgcacttttttttgtttggcattggtccctgc 47690377  T
Q  397 actttgtaaaaa 408  Q
    ||||||||||||    
T  47690378 actttgtaaaaa 47690389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 305 - 408
Target Start/End: Complemental strand, 322065 - 321963
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgta 404  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||    
T  322065 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-tttttttgtttcgcattggtccctgcactttgta 321967  T
Q  405 aaaa 408  Q
    ||||    
T  321966 aaaa 321963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 15168906 - 15169003
Alignment:
Q  304 attttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcacttt 401  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  15168906 atttaaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcacttt 15169003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 305 - 408
Target Start/End: Original strand, 13198967 - 13199070
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgta 404  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||| ||    
T  13198967 tttttaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttatttggcattggtccctgcacttttta 13199066  T
Q  405 aaaa 408  Q
    ||||    
T  13199067 aaaa 13199070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 888066 - 888164
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||        |||||||||||||||||||||||||||||||    
T  888066 aggtttaaatgtgtcattggtccctgcacttttatcagattttggcattggtccatgcacttttttttgtttggcattggtccctgcactttgtaaaaa 888164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 16335055 - 16335153
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||| |||||||||||||||||||    
T  16335055 aggtttaaatctgtcattggtccctgcactttcatcagattttggcattggtccctgcactttttttcgtttggcattgatccctgcactttgtaaaaa 16335153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 45311195 - 45311293
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  45311195 aggtttaaatgtgtcattggtccctgtactttcatcatattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 45311293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 40147350 - 40147447
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||    
T  40147350 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-tttttttgtttggaattggtccctgcactttgtaaaaa 40147447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 41965552 - 41965455
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||    
T  41965552 ggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccctgtacttttttttgtttggcattggtccctgcactttgtaaaaa 41965455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 42496342 - 42496245
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| || ||||||||||||    
T  42496342 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccttgtactttgtaaaaa 42496245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 401
Target Start/End: Complemental strand, 8445072 - 8444980
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcacttt 401  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  8445072 aaggtttaaatgtgtcattggtccctgcacttttatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcacttt 8444980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 23205699 - 23205795
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||||    
T  23205699 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-tttttttgtttgacattggtccctgcactttgtaaaaa 23205795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 46009035 - 46008940
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||    
T  46009035 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac--ttttttgtttggtattggtccctgcactttgtaaaaa 46008940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 49263873 - 49263971
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||        ||||||||||| ||| |||||||||||||||    
T  49263873 aggtttaaatgtgtcattggtccctgcactttcattagattttggcattggtccctgcacttttttttgtttggcattgatccttgcactttgtaaaaa 49263971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 408
Target Start/End: Complemental strand, 39210675 - 39210572
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgta 404  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||        ||||||| |||||||||||||||||||    
T  39210675 tttttaggtttaaatgtgtcattggtccctgcactttcatcaaattttggcattggtacctacacttttttttgtttggcgttggtccctgcactttgta 39210576  T
Q  405 aaaa 408  Q
    ||||    
T  39210575 aaaa 39210572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 35378073 - 35377975
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||        |||||| |||||||| |||||||||||||||    
T  35378073 aggtttaaatgtgtcattggtccctgcaatttcatcagattttggcattggtccctgtacttttttttgtttggtattggtccatgcactttgtaaaaa 35377975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 32328061 - 32328158
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||        ||||| ||||||||| |||||||||||||||    
T  32328061 ggtttaaatgtgtcactggtccctgcactttcatcagattttggcattggtctctgcacttttttttgtttgacattggtccttgcactttgtaaaaa 32328158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 369
Target Start/End: Complemental strand, 31317642 - 31317582
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31317642 aaggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccctgcac 31317582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 306 - 369
Target Start/End: Original strand, 919173 - 919236
Alignment:
Q  306 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  919173 tttaaggtttaaatgtgtcattagtccctgcactttcatcagattttggcattggtctctgcac 919236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 313 - 408
Target Start/End: Original strand, 44589028 - 44589123
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||| ||| |||||        |||||||||||||||||||||||||||||||    
T  44589028 tttaaatgtgtcattggttcctgcactttcatcagattttgacattgttccttgcacttttttttgtttggcattggtccctgcactttgtaaaaa 44589123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 366
Target Start/End: Original strand, 32384092 - 32384150
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctg 366  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32384092 taaggtttaaatatgtcattggtccctgcactttcatcagattttggcattggtccctg 32384150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 369
Target Start/End: Complemental strand, 53940757 - 53940699
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  53940757 ggtttaaatgtgtcattggtccctgcacttttatcagattttggcattggtccctgcac 53940699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 311 - 368
Target Start/End: Complemental strand, 45848685 - 45848628
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgca 368  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45848685 ggtttaaatgtgtcattggtcccagcactttcatcagattttggcattggtccctgca 45848628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 369
Target Start/End: Original strand, 10616464 - 10616520
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10616464 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtctctgcac 10616520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 43980186 - 43980134
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43980186 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 43980134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 52096955 - 52096856
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac--nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||          ||||||||||| |||||||||||||||||||    
T  52096955 ggtttaaatgtgtcattggtccctgcactttcatcagattttggtattggttcctgcacttttttttttgtttggcattgatccctgcactttgtaaaaa 52096856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 1922877 - 1922778
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||||||||  ||||||        ||||||||||||||| |||||||||||||||    
T  1922877 aaggtttaaatgtgtcattggtccttgcattttcatcatattttggcattggtttctgcacttttttttgtttggcattggtccttgcactttgtaaaaa 1922778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 32384327 - 32384220
Alignment:
Q  301 attattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactt 400  Q
    ||||| |||||| |||||| |||| || ||||||||||||||||||||||||||||||||||| | |||        |||||| ||||||||||||||||    
T  32384327 attatattaaggcttaaatatgtctttagtccctgcactttcatcagattttggcattggtccatacacttttttttgtttggaattggtccctgcactt 32384228  T
Q  401 tgtaaaaa 408  Q
    ||||||||    
T  32384227 tgtaaaaa 32384220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 369
Target Start/End: Original strand, 42207862 - 42207924
Alignment:
Q  306 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  42207862 tttaaggtttaaatgtgtcattggtcc-tgcactttcatcagattttggcattagtccctgcac 42207924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 311 - 369
Target Start/End: Original strand, 5813772 - 5813830
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  5813772 ggtttaaatgtgtcattggtcccttcactttcttcagattttggcattggtccctgcac 5813830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 314 - 408
Target Start/End: Complemental strand, 5814185 - 5814091
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||| |||| || ||||||||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  5814185 ttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 5814091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 47690705 - 47690607
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||| || ||||||||||||||||||||||||||||||||||||| |||        |||||| |||||||||| |||||||||||||    
T  47690705 aggtttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctacactttgtaaaaa 47690607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 51716539 - 51716483
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  51716539 aaggtttaaatgtgttattggtccctgcactttcattagattttggcattggtccct 51716483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 408
Target Start/End: Original strand, 29526243 - 29526346
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgta 404  Q
    |||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||  ||||||         |||| |||||||| ||||||||||||    
T  29526243 tttttaggtttaaatgtgtctttggtccttgcactttcatcagattttggcattggtttctgcacttttttttatttgacattggtctctgcactttgta 29526342  T
Q  405 aaaa 408  Q
    ||||    
T  29526343 aaaa 29526346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 300 - 408
Target Start/End: Original strand, 43561798 - 43561904
Alignment:
Q  300 tattattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcact 399  Q
    ||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||| ||| ||||||        |||||||||||||||||||| |    
T  43561798 tattatttttaggtt-aaatgtgtcattggtccctgtactttcatcagattttgacattcgtctctgcac-tttttttgtttggcattggtccctgcatt 43561895  T
Q  400 ttgtaaaaa 408  Q
    |||||||||    
T  43561896 ttgtaaaaa 43561904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 1613940 - 1614038
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| || | || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  1613940 aggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 1614038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 1614326 - 1614264
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| |||||    
T  1614326 ttaaggtttaaatgtgtcattggtccctgcactttcattaaattttgacattggtccttgcac 1614264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 32328448 - 32328350
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||  ||||||||||||||||||||||||    
T  32328448 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaa 32328350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 408
Target Start/End: Original strand, 42495933 - 42496027
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||| |||| || ||||||||||||||||||||||||| ||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  42495933 ttaaatatgtctttagtccctgcactttcatcagattttgacattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 42496027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 40005413 - 40005512
Alignment:
Q  310 aggtttaaatgtgtcat--tggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||          || ||||||||||||||||||||||||||    
T  40005413 aggtttaaatgtgtcatattggtccctgcactttcatcagattttgacattggtccctgcaattttttttatt-ggcattggtccctgcactttgtaaaa 40005511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 31317258 - 31317354
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  31317258 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgtaaaaa 31317354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 408
Target Start/End: Complemental strand, 43562109 - 43562009
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    |||||||||||| || | || ||||||||| ||||||||||||||||||||||||||| |||        |||||| |||||||||| ||||||||||||    
T  43562109 taaggtttaaatatgcctttagtccctgcattttcatcagattttggcattggtccctacacttttttttgtttggaattggtcccttcactttgtaaaa 43562010  T
Q  408 a 408  Q
    |    
T  43562009 a 43562009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 313 - 408
Target Start/End: Original strand, 43979276 - 43979371
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||| |||| ||  ||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  43979276 tttaaatatgtctttaatccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 43979371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 49264288 - 49264189
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||  ||||||||||| ||||||||||||    
T  49264288 aaggtttaaatatgtctttcgtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgtaattggtccctgtactttgtaaaaa 49264189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 369
Target Start/End: Complemental strand, 13086666 - 13086609
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||    
T  13086666 ggtttaaatgtatcattggtccctgtacttt-atcagattttggcattggtccctgcac 13086609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 46008546 - 46008644
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| || | || |||| |||||||||||||||||||||||||||||||| |||        |||||| |||||||| |||||||||||||||    
T  46008546 aggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccttgcactttgtaaaaa 46008644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 45311648 - 45311551
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||| || |||| |||||||||||||||||||||||||||||| | ||         |||||| ||||||||||||||||||||||||    
T  45311648 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccttacatttttttttgtttggaattggtccctgcactttgtaaaaa 45311551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 51893045 - 51892948
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||| || |||| |||||||||||||||||||||||||| ||||| |||        |||||| |||||||||| |||||||||||||    
T  51893045 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattgatccctacacttttttttgtttggaattggtccctacactttgtaaaaa 51892948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 18436790 - 18436886
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| || | || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  18436790 ggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgtaaaaa 18436886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 40147679 - 40147583
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||| || | || ||||||||||||||||||||||||||||||||||||        |||||| ||||||| ||||||||||||||||    
T  40147679 ggtttaaatatgtctttagaccttgcactttcatcagattttggcattggtccctgcac-tttttttgtttggaattggtctctgcactttgtaaaaa 40147583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 369
Target Start/End: Complemental strand, 44098823 - 44098763
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||| ||||||| ||||||||||||||| || ||||||||||||||| ||||||    
T  44098823 aaggtttaaatatgtcattagtccctgcactttcaccatattttggcattggtctctgcac 44098763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 365
Target Start/End: Original strand, 28692952 - 28693007
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||    
T  28692952 aggtttaaatgtgttattgctccctgcactttcatcatattttagcattggtccct 28693007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 365
Target Start/End: Complemental strand, 28693311 - 28693252
Alignment:
Q  306 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||||||||| |||| || |||| |||||||||||||||||||| |||||||||||    
T  28693311 tttaaggtttaaatatgtctttagtccttgcactttcatcagattttgtcattggtccct 28693252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 408
Target Start/End: Original strand, 8444652 - 8444754
Alignment:
Q  306 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaa 405  Q
    |||| ||||||||| |||| || |||| | |||||||||||||||||||||||||||||| |||        |||||  |||||||||| ||||||||||    
T  8444652 tttatggtttaaatatgtctttagtccttacactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctacactttgtaa 8444751  T
Q  406 aaa 408  Q
    |||    
T  8444752 aaa 8444754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 334 - 408
Target Start/End: Complemental strand, 13199394 - 13199320
Alignment:
Q  334 tgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||| |||        |||||| |||| |||||||||||||||||||    
T  13199394 tgcactttcatcagattttggcattggtccctacacttatttttgtttggaattgatccctgcactttgtaaaaa 13199320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 15169387 - 15169289
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||| || ||||  ||||||||||||||||||||| ||||||||| ||         |||||| ||||||||||||||||||||||||    
T  15169387 aggtttaaatatgtctttagtcctggcactttcatcagattttggcgttggtccctacatttttttttgtttggaattggtccctgcactttgtaaaaa 15169289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 330 - 408
Target Start/End: Complemental strand, 42208193 - 42208115
Alignment:
Q  330 tccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||| || |||        |||||| |||| |||||||||||||||||||    
T  42208193 tccctgcactttcatcagattttggcattggtctctacacttttttttgtttggaattgatccctgcactttgtaaaaa 42208115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 329 - 408
Target Start/End: Complemental strand, 45226401 - 45226323
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||| |||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  45226401 gtccctgcactttcatcaaattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgtaaaaa 45226323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 408
Target Start/End: Original strand, 52096569 - 52096663
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||| |||| || ||||||||| ||||||||||||||||||||||||| | |||        |||||| |||||||||| |||||||||||||    
T  52096569 ttaaatatgtctttagtccctgcattttcatcagattttggcattggtccatacactttattttgtttggaattggtccctacactttgtaaaaa 52096663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 42598909 - 42599006
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| || | || |||| |||||||||||||||||||||||||||||||| |||        |||||| |||| |||||||||||||||||||    
T  42598909 aggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacac-tttttttgtttggaattgatccctgcactttgtaaaaa 42599006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 341
Target Start/End: Complemental strand, 11021666 - 11021630
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcacttt 341  Q
    |||||||||||||||||||||||||||||||||||||    
T  11021666 ttttaaggtttaaatgtgtcattggtccctgcacttt 11021630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 23206085 - 23205980
Alignment:
Q  301 attattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactt 400  Q
    ||||||||| ||||||||| |||| || |||| | ||||||||||||||||||||||| |||||| |||         ||||| ||||||||||||||||    
T  23206085 attatttta-ggtttaaatatgtctttagtcctttcactttcatcagattttggcattagtccctacacttttttta-tttggaattggtccctgcactt 23205988  T
Q  401 tgtaaaaa 408  Q
    ||||||||    
T  23205987 tgtaaaaa 23205980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 408
Target Start/End: Complemental strand, 40005807 - 40005729
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||| |||||||||||||||||||||||||||||||| ||         |||||| ||||||||||||||||||||||||    
T  40005807 gtccttgcactttcatcagattttggcattggtccctaca-ttttttttgtttggaattggtccctgcactttgtaaaaa 40005729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 369
Target Start/End: Original strand, 49148170 - 49148225
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||| ||||||| ||||||||||||||| || |||||||||||||||| |||||    
T  49148170 ttaaatatgtcattagtccctgcactttcaccatattttggcattggtccttgcac 49148225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 408
Target Start/End: Complemental strand, 8445002 - 8444944
Alignment:
Q  350 tttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  8445002 tttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 8444944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 15168981 - 15169039
Alignment:
Q  350 tttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  15168981 tttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 15169039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 407
Target Start/End: Complemental strand, 40087296 - 40087199
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttca-tcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    ||||||||||||||  || ||||||||||||||| ||| |||||||||||||||||||| |        |||||||||||| || ||||||||||||||    
T  40087296 aggtttaaatgtgtgtttagtccctgcactttcactca-attttggcattggtccctgcgcttttttttgtttggcattggcccttgcactttgtaaaa 40087199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Original strand, 51716121 - 51716175
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||| |||| || |||| ||||||||||||| ||||||||||||||||||    
T  51716121 ggtttaaatatgtctttagtccttgcactttcatcaaattttggcattggtccct 51716175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 30560718 - 30560661
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccc 364  Q
    |||||| |||||| |||| || || ||||||||||||||| |||||||||||||||||    
T  30560718 ttaaggcttaaatatgtctttagttcctgcactttcatcatattttggcattggtccc 30560661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 41965142 - 41965195
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||| |||| ||  ||| ||||||||||||||||||||||||||||||||    
T  41965142 gtttaaatatgtctttaatccttgcactttcatcagattttggcattggtccct 41965195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 321673 - 321745
Alignment:
Q  336 cactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||| |||         |||||  |||||||||||||||||||||||    
T  321673 cactttcatcagattttggcattggtccctacacttttttttatttggagttggtccctgcactttgtaaaaa 321745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 19842831 - 19842775
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||||| |  |||||||||||||||||| |  ||||||||||||||||||    
T  19842831 aaggtttaaatgtatgtttggtccctgcactttcacccaattttggcattggtccct 19842775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 361
Target Start/End: Original strand, 1922493 - 1922544
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggt 361  Q
    |||||||||| || | || |||| ||||||||||||||||||||||||||||    
T  1922493 aggtttaaatatgcctttagtccttgcactttcatcagattttggcattggt 1922544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 407
Target Start/End: Complemental strand, 55604223 - 55604119
Alignment:
Q  301 attattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactt 400  Q
    |||||||| ||| ||||||||||  |||||||||||||||||  |  ||||| ||||||||||||  ||        ||||||||||||||| |||||||    
T  55604223 attatttttaggcttaaatgtgtgtttggtccctgcactttcgcccaattttagcattggtccct--acgtttttttgtttggcattggtccttgcactt 55604126  T
Q  401 tgtaaaa 407  Q
    |||||||    
T  55604125 tgtaaaa 55604119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 341
Target Start/End: Complemental strand, 18437168 - 18437138
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcacttt 341  Q
    |||||||||||||||||||||||||||||||    
T  18437168 ggtttaaatgtgtcattggtccctgcacttt 18437138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 366
Target Start/End: Original strand, 55601199 - 55601257
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctg 366  Q
    ||||||||||||||||  || |||||||||||||| ||   ||||||||||||||||||    
T  55601199 taaggtttaaatgtgtgtttagtccctgcactttcgtccagttttggcattggtccctg 55601257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 10616621 - 10616572
Alignment:
Q  303 tattttaaggtttaaatgtgtcattggtccctgcactttcatcagatttt 352  Q
    |||||||||| |||||| |||| || |||||||||||||||| |||||||    
T  10616621 tattttaaggcttaaatatgtctttagtccctgcactttcattagatttt 10616572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 11021375 - 11021404
Alignment:
Q  379 tttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||    
T  11021375 tttggcattggtccctgcactttgtaaaaa 11021404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 31317601 - 31317572
Alignment:
Q  379 tttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||    
T  31317601 tttggcattggtccctgcactttgtaaaaa 31317572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 369
Target Start/End: Original strand, 45226040 - 45226073
Alignment:
Q  336 cactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||||||| |||||||    
T  45226040 cactttcatcagattttggcattggttcctgcac 45226073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 53940718 - 53940689
Alignment:
Q  379 tttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||    
T  53940718 tttggcattggtccctgcactttgtaaaaa 53940689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 366
Target Start/End: Original strand, 19842211 - 19842263
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctg 366  Q
    ||||||||||  ||||||| |||||||||| |  |||||||||||||||||||    
T  19842211 ttaaatgtgtgtttggtccatgcactttcacccaattttggcattggtccctg 19842263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 310 - 366
Target Start/End: Original strand, 40722335 - 40722391
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctg 366  Q
    |||||||| | ||||||||||||||||||||| | || |||||||| ||||| ||||    
T  40722335 aggtttaagtatgtcattggtccctgcacttttaccatattttggctttggttcctg 40722391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 5e-35; HSPs: 85)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 305 - 408
Target Start/End: Complemental strand, 38717749 - 38717646
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgta 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||        |||||||||||||||||||||||||||    
T  38717749 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccttgcacttttttttgtttggcattggtccctgcactttgta 38717650  T
Q  405 aaaa 408  Q
    ||||    
T  38717649 aaaa 38717646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 1342432 - 1342529
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||| |||||||||||||||||||    
T  1342432 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattgatccctgcactttgtaaaaa 1342529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 2930961 - 2931058
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  2930961 ggtttaattgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 2931058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 5132744 - 5132647
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||||    
T  5132744 ggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 5132647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 45950903 - 45951000
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||||    
T  45950903 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttgacattggtccctgcactttgtaaaaa 45951000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 36465934 - 36466033
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||        |||||||||||||||||||||||||||||||    
T  36465934 aaggtttaaatgtgtcattggtccctgcactttcatcagattttgaaattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 36466033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 17077325 - 17077423
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  17077325 aggtttaaatgtgtcattggtccttgcactttcatcatattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 17077423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 25379021 - 25378923
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||        |||||||||||||||||||||||||||||||    
T  25379021 aggtttgaatgtgtcattggtccctgcactttcatcagattttggcattggtctctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 25378923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 28487035 - 28486937
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||        ||||||||||||||| |||||||||||||||    
T  28487035 aggtttaaatgtgtcattggtccctgcactttcatcagatattggcattggtccctgcacttttttttgtttggcattggtccttgcactttgtaaaaa 28486937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 306 - 408
Target Start/End: Original strand, 36302423 - 36302525
Alignment:
Q  306 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaa 405  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||        |||||||||||||||||| |||||||||    
T  36302423 tttaaggtttaaatgtgtcattggtccatgcactttcatcagattttggcattggtccatgcacttttttttgtttggcattggtccctgtactttgtaa 36302522  T
Q  406 aaa 408  Q
    |||    
T  36302523 aaa 36302525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 47647857 - 47647955
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||        || ||||||||||||||||||||||||||||    
T  47647857 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtctctgcacttttttttgtatggcattggtccctgcactttgtaaaaa 47647955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 301 - 408
Target Start/End: Original strand, 5904803 - 5904911
Alignment:
Q  301 attattttaaggtttaaatgtgtcattggtccctgcactttcatcag-attttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcact 399  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||        ||||||||||||||| ||||||    
T  5904803 attaatttaaggtttaaatgtgtcattggtccctgcacttttatcagaattttggcattggtccctgcacttttttttgtttggcattggtccatgcact 5904902  T
Q  400 ttgtaaaaa 408  Q
    |||||||||    
T  5904903 ttgtaaaaa 5904911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 300 - 408
Target Start/End: Original strand, 23253314 - 23253422
Alignment:
Q  300 tattattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcact 399  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||        |||||||||| |||| ||||||    
T  23253314 tattattttaaggtttaaatgtgtcattggtccttcaactttcatcagattttggcattggtccctgcacttttttttgtttggcattagtccatgcact 23253413  T
Q  400 ttgtaaaaa 408  Q
    |||||||||    
T  23253414 ttgtaaaaa 23253422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 39758949 - 39759048
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  39758949 aaggtttaaatgtatcattggtctctacactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 39759048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 39759335 - 39759237
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||| |||||||||||||||||||    
T  39759335 aaggtttaaatgtgtcattggtccctgcactttcatcaga-tttggcattggtccctgcacttttttttgtttggcattgatccctgcactttgtaaaaa 39759237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 39764303 - 39764402
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  39764303 aaggtttaaatgtatcattggtctctacactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 39764402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 6782975 - 6782877
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||        ||||||||||||||| ||||||||| |||||    
T  6782975 aggtttaaatgtgtcattggtccttgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccttgcactttgcaaaaa 6782877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 306 - 408
Target Start/End: Complemental strand, 37351351 - 37351249
Alignment:
Q  306 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaa 405  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||        ||||||||||||||| ||| ||||||||    
T  37351351 tttaatgtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccttgcacttttttttgtttggcattggtccatgcgctttgtaa 37351252  T
Q  406 aaa 408  Q
    |||    
T  37351251 aaa 37351249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 39524269 - 39524368
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac--nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||| ||||||||||||||||||||||||    
T  39524269 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttttgtttggaattggtccctgcactttgtaaaaa 39524368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 15875236 - 15875130
Alignment:
Q  301 attattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactt 400  Q
    ||||||||| |||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||        ||||| |||||||||||||||||    
T  15875236 attattttatggtttaaatgtgtcattggtcc-tacacttttatcagattttggcattggtccctgcacttttttttgtttgacattggtccctgcactt 15875138  T
Q  401 tgtaaaaa 408  Q
    ||||||||    
T  15875137 tgtaaaaa 15875130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 28838517 - 28838418
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||         |||||||||||||||||||||||||||||||    
T  28838517 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtctatgcactttttttttgtttggcattggtccctgcactttgtaaaaa 28838418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 311 - 369
Target Start/End: Complemental strand, 1366686 - 1366628
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1366686 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 1366628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 32486859 - 32486957
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgca-cnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||    
T  32486859 ggtttaaatgtgtcattagtccctgcactttcatcagattttggcattggtccctgcagtttttttttgtttggcattggtccctgcactttgtaaaaa 32486957  T

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Target: chr1; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 40124780 - 40124878
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| ||||| |||||||||        |||||||||||||||||||||||||||||||    
T  40124780 aggtttaaatgtgtcattggtccctacactttcatcaaattttgacattgatccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 40124878  T

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Target: chr1; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 2730736 - 2730833
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||        ||||| |||||||||||||||||||||||||    
T  2730736 aggtttaaatgtgttattggtccctgcacttttatcagattttggcattggtccctgcac-tttttttgtttgacattggtccctgcactttgtaaaaa 2730833  T

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Target: chr1; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 408
Target Start/End: Complemental strand, 38872920 - 38872824
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||         ||||||||||||||||||||||| |||||||    
T  38872920 tttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcactttttttttgtttggcattggtccctgcacttcgtaaaaa 38872824  T

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Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 408
Target Start/End: Complemental strand, 39950610 - 39950514
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||| || |||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||| ||||||    
T  39950610 gtttaaatgtgtcatttgttcctgcactttcatcagattttggcattgatccctgcacttttttttgtttggcattggtccctgcactttataaaaa 39950514  T

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Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 47671998 - 47672058
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47671998 aaggtttaaatgtgtcattggtccctgcactttcatcagatttaggcattggtccctgcac 47672058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 49628127 - 49628223
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||        ||||| |||||||||||||||||||||||||    
T  49628127 ggtttaaatatgtcattggtccctgcactttcatcagattttggcattagtccctgcac-tttttttgtttgacattggtccctgcactttgtaaaaa 49628223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 30056927 - 30057025
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||         ||||||||||||||| |||||||||||||||    
T  30056927 ggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccctacactttttttttgtttggcattggtccttgcactttgtaaaaa 30057025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 44519339 - 44519437
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||         ||||||||||| ||| |||||||||||||||    
T  44519339 aggtttaaatgtgtcattggtctctgcattttcatcagattttggcattggtccctgcatttttttttgtttggcattgatccttgcactttgtaaaaa 44519437  T

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Target: chr1; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 52346229 - 52346326
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||        ||||| |||||||| ||||||||||||||||    
T  52346229 ggtttaaatatgttattggtccatgcactttcatcagattttggcattggtccctgcacttttttttgtttgacattggtctctgcactttgtaaaaa 52346326  T

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Target: chr1; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 312 - 408
Target Start/End: Original strand, 44396060 - 44396156
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||| |||||||||||||||||||||||||||||  |||||||||||||         ||||| |||||||||||||||||||||||||    
T  44396060 gtttaaatgtgttattggtccctgcactttcatcagattttgatattggtccctgcatttttttttgtttgacattggtccctgcactttgtaaaaa 44396156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 50755655 - 50755754
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| ||        |||| ||||||||||||||||||| ||||||    
T  50755655 aaggtttaaatgtgttattggtcccgacactttcatcagattttggcattggtccctgtacttttttttgtttagcattggtccctgcactttataaaaa 50755754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 5132425 - 5132523
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  5132425 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 5132523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 313 - 408
Target Start/End: Original strand, 14556018 - 14556112
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||        ||||||||||||||| || ||||||||||||    
T  14556018 tttaaatgtgtcattggtccctgcactttcatcagattttgacattgatccctgcac-tttttttgtttggcattggtccttgtactttgtaaaaa 14556112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 28486619 - 28486717
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  28486619 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 28486717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 307 - 361
Target Start/End: Complemental strand, 32005767 - 32005713
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggt 361  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32005767 ttaaagtttaaatgtgtcattggtccctgcactttcatcagattttggcattggt 32005713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 32487277 - 32487178
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| || | || ||||||||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||| ||||||||||    
T  32487277 aaggtttaaatatgcctttagtccctgcactttcatcagattttggcattggtccctacacttatttttgtttggaattggtccctgcaatttgtaaaaa 32487178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 306 - 408
Target Start/End: Complemental strand, 1342851 - 1342749
Alignment:
Q  306 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaa 405  Q
    |||| ||||||||| |||| || |||| | |||||||||||||||||||||||||||||| |||        |||||| |||||||||||||||||||||    
T  1342851 tttatggtttaaatatgtctttagtccttacactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaa 1342752  T
Q  406 aaa 408  Q
    |||    
T  1342751 aaa 1342749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 2937192 - 2937094
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  2937192 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgtaaaaa 2937094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 368
Target Start/End: Complemental strand, 38459408 - 38459350
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgca 368  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||    
T  38459408 aggtttaaatgtgtaattggtccctgcactttcatcagtttttggctttggtccctgca 38459350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 38872509 - 38872607
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| || | || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  38872509 aggtttaaatatgactttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 38872607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 407
Target Start/End: Complemental strand, 5905150 - 5905050
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaa 406  Q
    ||||||||||||| |||  || |||| |||||||||||||||||||||||||||||||| |||        |||||| |||||||||| |||||||||||    
T  5905150 ttaaggtttaaatatgtttttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctacactttgtaaa 5905051  T
Q  407 a 407  Q
    |    
T  5905050 a 5905050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 408
Target Start/End: Complemental strand, 23253742 - 23253642
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    |||||||||||| || | || |||| |||||||||||||||||||||||||||||||| ||         |||||| |||||||||||||||||||||||    
T  23253742 taaggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacaattttttttgtttggaattggtccctgcactttgtaaaa 23253643  T
Q  408 a 408  Q
    |    
T  23253642 a 23253642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 40125198 - 40125099
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| || | || ||||||||||||||||||||||||||||||||||||| |||        |||||| ||| | ||||||||||||||||||    
T  40125198 aaggtttaaatatgcctttagtccctgcactttcatcagattttggcattggtccctacacttttttttgtttggaattagcccctgcactttgtaaaaa 40125099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 28838100 - 28838198
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| | || || |||| |||||||||||||||||||||||||||||||| |||        |||||| |||||| |||||||||||||||||    
T  28838100 aggtttaaatatctctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggttcctgcactttgtaaaaa 28838198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 47648271 - 47648173
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| || | || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||| ||||||||||||    
T  47648271 aggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgtactttgtaaaaa 47648173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 6782566 - 6782663
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| || | || |||| |||||||||||||||||||||||||||||||| |||        |||||| |||| |||||||||||||||||||    
T  6782566 ggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattgatccctgcactttgtaaaaa 6782663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 369
Target Start/End: Original strand, 25378685 - 25378746
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||| |||| || |||  ||||||||||||||||||||||||||||||||||||    
T  25378685 taaggtttaaatatgtctttagtctttgcactttcatcagattttggcattggtccctgcac 25378746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 366
Target Start/End: Original strand, 29715413 - 29715473
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctg 366  Q
    |||||||||||||||||||||||||| | ||||||||||||| | |||||||||||||||||    
T  29715413 ttttaaggtttaaatgtgtcattggttcttgcactttcatcata-tttggcattggtccctg 29715473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 50756073 - 50755976
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| || | || |||| |||||||||||||||||||||||||||||||| ||         |||||| ||||||||||||||||||||||||    
T  50756073 ggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacaattttttttgtttggaattggtccctgcactttgtaaaaa 50755976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 368
Target Start/End: Complemental strand, 14291659 - 14291603
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgca 368  Q
    |||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||    
T  14291659 gtttaaatgtgttattgatccctgcactttcatcagattttgacattgatccctgca 14291603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 365
Target Start/End: Complemental strand, 44396461 - 44396401
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||| |||||||||| |||| || |||| ||||||||||||||||||||||||||||||||    
T  44396461 tttttaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccct 44396401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 408
Target Start/End: Complemental strand, 47672356 - 47672260
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||| || | || |||| ||||||||||||||||||||| |||||||||| |||        |||||| ||||||||||||||||||||||||    
T  47672356 gtttaaatatgcctttagtccttgcactttcatcagattttggtattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 47672260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 1366301 - 1366400
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| || | || |||| |||||||||||||||||||||||||||||||| |||         |||||| ||||||||||||||||||||||||    
T  1366301 aggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaaa 1366400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 408
Target Start/End: Complemental strand, 14556408 - 14556329
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||| |||||| |||        |||||| |||| |||||||||||||||||||    
T  14556408 gtccctgcactttcatcagattttggcatttgtccctacacttttttttgtttggaattgatccctgcactttgtaaaaa 14556329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 37350938 - 37351037
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| || | ||  ||| |||||||||||||||||||||||||||||||| ||         |||||| ||||||||||||||||||||||||    
T  37350938 aaggtttaaatatgcctttaatccttgcactttcatcagattttggcattggtccctacatttttttttgtttggaattggtccctgcactttgtaaaaa 37351037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 408
Target Start/End: Complemental strand, 38019376 - 38019281
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||| |||| || |||| |||||||||||||||||||| ||||||||||| |||        |||||  ||||||||||||||||||||||||    
T  38019376 tttaaatatgtctttagtccttgcactttcatcagattttgacattggtccctacacatttttttgtttgaaattggtccctgcactttgtaaaaa 38019281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 2731123 - 2731067
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||| |||| || |||| ||||||||||||||||||||| ||||||||||    
T  2731123 aaggtttaaatatgtctttagtccttgcactttcatcagattttggtattggtccct 2731067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 369
Target Start/End: Complemental strand, 36726492 - 36726432
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||  |||||||||||| |||||||  |||||||| |||||||||||||    
T  36726492 aaggtttaaatgtgtgtttggtccctgcattttcatctaattttggctttggtccctgcac 36726432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 38456147 - 38456207
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||| |||||||||||||||||||||||||||||| ||  ||||||| ||| |||||||||    
T  38456147 aaggcttaaatgtgtcattggtccctgcactttcaccattttttggctttgatccctgcac 38456207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 369
Target Start/End: Original strand, 16389253 - 16389308
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||||||||||| ||  ||||||| ||||||| |||||    
T  16389253 ttaaatgtgtcattggtccctgcactttcaccattttttggctttggtccttgcac 16389308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 368
Target Start/End: Complemental strand, 39096704 - 39096641
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgca 368  Q
    ||||||| ||||||||||||||| ||||||||||||| |||| |||||| || | |||||||||    
T  39096704 ttttaagatttaaatgtgtcattagtccctgcactttgatcatattttgacaatagtccctgca 39096641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Original strand, 29548581 - 29548635
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||| || | || |||| ||||||||||||||||||||||||||||||||    
T  29548581 ggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccct 29548635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 369
Target Start/End: Complemental strand, 29548911 - 29548849
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||| ||||||||||||||||||||||||||||||||  |  |  ||||||||||||||||||||    
T  29548911 tttttaggtttaaatgtgtcattggtccctgcacttttttttg--tttggcattggtccctgcac 29548849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 29721481 - 29721449
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggt 361  Q
    |||||||||||||||||||||||||||||||||    
T  29721481 gtccctgcactttcatcagattttggcattggt 29721449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 36302823 - 36302791
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggt 361  Q
    |||||||||||||||||||||||||||||||||    
T  36302823 gtccctgcactttcatcagattttggcattggt 36302791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 36466331 - 36466295
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccct 365  Q
    |||| ||||||||||||||||||||||||||||||||    
T  36466331 gtccttgcactttcatcagattttggcattggtccct 36466295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 365
Target Start/End: Original strand, 39950226 - 39950286
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||||||| |||| || |||  | ||||||||||||||||||| ||||||||||    
T  39950226 ttttaaggtttaaatatgtctttagtctttacactttcatcagattttggtattggtccct 39950286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 334 - 365
Target Start/End: Complemental strand, 30057318 - 30057287
Alignment:
Q  334 tgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||||||||||||||||||||||||    
T  30057318 tgcactttcatcagattttggcattggtccct 30057287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 369
Target Start/End: Original strand, 38018999 - 38019057
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||| ||||||||| || ||||||||||||||||| ||| ||| |||||||||||    
T  38018999 aggtttaaacgtgtcattg-tctctgcactttcatcagatcttgacatcggtccctgcac 38019057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 365
Target Start/End: Complemental strand, 44519753 - 44519698
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||||| |||| ||  ||| ||||||||||||||||||||| ||||||||||    
T  44519753 aggtttaaatatgtctttaatccttgcactttcatcagattttggtattggtccct 44519698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 365
Target Start/End: Complemental strand, 49628506 - 49628451
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||||| | || || |||| ||||||||||| ||||||||||||||||||||    
T  49628506 aggtttaaatatctctttagtccttgcactttcattagattttggcattggtccct 49628451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 367
Target Start/End: Original strand, 8679820 - 8679878
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgc 367  Q
    |||| ||||||||||  |||||||||||||||||| |  ||||| ||||||||||||||    
T  8679820 aaggcttaaatgtgtgtttggtccctgcactttcacctaatttttgcattggtccctgc 8679878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 408
Target Start/End: Complemental strand, 29548869 - 29548839
Alignment:
Q  378 gtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||    
T  29548869 gtttggcattggtccctgcactttgtaaaaa 29548839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 1366647 - 1366618
Alignment:
Q  379 tttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||    
T  1366647 tttggcattggtccctgcactttgtaaaaa 1366618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 25378727 - 25378756
Alignment:
Q  379 tttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||    
T  25378727 tttggcattggtccctgcactttgtaaaaa 25378756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 38291343 - 38291314
Alignment:
Q  379 tttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||    
T  38291343 tttggcattggtccctgcactttgtaaaaa 38291314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 2937040 - 2937012
Alignment:
Q  380 ttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||    
T  2937040 ttggcattggtccctgcactttgtaaaaa 2937012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 16813746 - 16813802
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||| |||||| ||||||| ||||||||||||| | ||| ||| |||||||||||||    
T  16813746 aaggcttaaatatgtcattagtccctgcactttaaccagttttaggcattggtccct 16813802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 17077724 - 17077688
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccct 365  Q
    |||| |||||||||||||||||||| |||||||||||    
T  17077724 gtccttgcactttcatcagattttgacattggtccct 17077688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 21623509 - 21623453
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||||||||||  ||| |||||||||||||||||  |||||| ||| ||||||    
T  21623509 aaggtttaaatgtgtgtttgatccctgcactttcatcactttttgggattagtccct 21623453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 38291382 - 38291350
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcacttt 341  Q
    ||||||||||| |||||||||||||||||||||    
T  38291382 aaggtttaaatatgtcattggtccctgcacttt 38291350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 51031952 - 51032008
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccc 364  Q
    ||||| ||||||||||  ||| |||||||||||||| |  |||||||||||||||||    
T  51031952 taaggcttaaatgtgtgtttgatccctgcactttcacccaattttggcattggtccc 51032008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 68)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 20166480 - 20166382
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  20166480 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 20166382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 26408636 - 26408734
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  26408636 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 26408734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 27858386 - 27858485
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||| |||||||||||||||||||||||||||    
T  27858386 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgttaggcattggtccctgcactttgtaaaaa 27858485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 306 - 408
Target Start/End: Original strand, 25945324 - 25945426
Alignment:
Q  306 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaa 405  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||    
T  25945324 tttatggtttaaatgtgacattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaa 25945423  T
Q  406 aaa 408  Q
    |||    
T  25945424 aaa 25945426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 306 - 408
Target Start/End: Complemental strand, 39412537 - 39412435
Alignment:
Q  306 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaa 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||| ||||||| |||||||||    
T  39412537 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcatttgtccctgtactttgtaa 39412438  T
Q  406 aaa 408  Q
    |||    
T  39412437 aaa 39412435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 306 - 408
Target Start/End: Original strand, 5907255 - 5907356
Alignment:
Q  306 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaa 405  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||||||||||    
T  5907255 tttaaggtttaaatgtgtcattggtccctgcactttcatcaaattttggcattggtccctgcac-tttttttgtttggcattggtccctgcactttgtaa 5907353  T
Q  406 aaa 408  Q
    |||    
T  5907354 aaa 5907356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 8343442 - 8343345
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||        |||||||||||||||||||||||||||||||    
T  8343442 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggttcctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 8343345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 15443032 - 15442935
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||        |||||||||||||||||||||||||||||||    
T  15443032 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccttgcacttttttttgtttggcattggtccctgcactttgtaaaaa 15442935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 312 - 408
Target Start/End: Complemental strand, 16969097 - 16969001
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  16969097 gtttaaatgtgtcattgatccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 16969001  T

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Target: chr5; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 408
Target Start/End: Original strand, 18705525 - 18705620
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||    
T  18705525 tttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 18705620  T

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Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 23910293 - 23910392
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||        |||||||||||||||||||||||||||||||    
T  23910293 aaggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctacacttttttttgtttggcattggtccctgcactttgtaaaaa 23910392  T

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Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 23592479 - 23592577
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||        |||||||||||||||||||||||||||||||    
T  23592479 aggtttaaatgtgtcattggtccctgcactttcatcagattttgatattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 23592577  T

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Target: chr5; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 9176958 - 9177055
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||| |||||||||||||||||||    
T  9176958 ggtttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcacttgtttttgtttggcattgatccctgcactttgtaaaaa 9177055  T

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Target: chr5; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 22619447 - 22619544
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||||||    
T  22619447 ggtttaaatgtgtcattggtctctgcactttcatcagattttggcattgttccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 22619544  T

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Target: chr5; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 307 - 408
Target Start/End: Original strand, 32792359 - 32792460
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaa 406  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||        |||||||||||||||||||||||||||||    
T  32792359 ttaaggtttaaatgtgtcattggtccctgcacttttatcaaattttggcattggtctctgcacttttttttgtttggcattggtccctgcactttgtaaa 32792458  T
Q  407 aa 408  Q
    ||    
T  32792459 aa 32792460  T

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Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 309 - 401
Target Start/End: Original strand, 2268225 - 2268317
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcacttt 401  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||    
T  2268225 aaggtttaaatgtgtcattagtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcacttt 2268317  T

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Target: chr5; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 973825 - 973924
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  973825 aggtttaaatgtgtcattggtccctgcactttcatcaaattttggcattggtccctgcactttttttttgtttggcattggtccctgcactttgtaaaaa 973924  T

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Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 307 - 408
Target Start/End: Original strand, 8144669 - 8144770
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaa 406  Q
    ||||||||||||||||| |||||||  |||||||| |||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  8144669 ttaaggtttaaatgtgttattggtctatgcacttttatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaa 8144768  T
Q  407 aa 408  Q
    ||    
T  8144769 aa 8144770  T

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Target: chr5; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 13198299 - 13198199
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||    
T  13198299 aaggtttaaatgtgttattggtccttgcactttcatcagattttggcattggtccctgcactttttttttgtttggcattggtccctgcactttgtaaaa 13198200  T
Q  408 a 408  Q
    |    
T  13198199 a 13198199  T

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Target: chr5; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 308 - 404
Target Start/End: Original strand, 17964646 - 17964742
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgta 404  Q
    |||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||        |||||||||||||||||||||||||||    
T  17964646 taaggtttaaatgtgttattggttcctgcactttcatcagatttttgcattggtccctgcacttttttttgtttggcattggtccctgcactttgta 17964742  T

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Target: chr5; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 27858720 - 27858624
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||    
T  27858720 ggtttaaatgtgtcattggtccctgcattttcatcagattttggtattggtccctgcac-tttttttgtttggcattggtccctgcactttgtaaaaa 27858624  T

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Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 408
Target Start/End: Complemental strand, 11062730 - 11062634
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||         ||||||||||||||||||||||||||||||    
T  11062730 gtttaaacatgtcattggtccctgcactttcatcagattttggtattggtccctgcacttttttttctttggcattggtccctgcactttgtaaaaa 11062634  T

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Target: chr5; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 305 - 408
Target Start/End: Original strand, 4716812 - 4716915
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgta 404  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||        ||||||||||||||| || ||||||||    
T  4716812 tttttaggtttaaatgtgtcattggtcccttcactttcatcagaatttggtattggtccctgcacttttttttgtttggcattggtccatgtactttgta 4716911  T
Q  405 aaaa 408  Q
    ||||    
T  4716912 aaaa 4716915  T

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Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 11062346 - 11062445
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  11062346 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 11062445  T

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Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 369
Target Start/End: Complemental strand, 23592866 - 23592807
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23592866 aggtttaaacgtgtcattggtccctgcactttcatcagattttgacattggtccctgcac 23592807  T

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Target: chr5; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 5214265 - 5214363
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  5214265 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 5214363  T

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Target: chr5; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 311 - 369
Target Start/End: Complemental strand, 5214650 - 5214592
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  5214650 ggtttaaatgtgtcattggtccatgcactttcatcagattttgacattggtccctgcac 5214592  T

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Target: chr5; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 18036635 - 18036538
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||| ||| | |||||| |||||||||||||| |||||||||        ||||||||||||||||| |||||||||||||    
T  18036635 ggtttaaatgtgtcattggtctctgtaatttcataagattttggcattgatccctgcacttttttttgtttggcattggtccctacactttgtaaaaa 18036538  T

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Target: chr5; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 314 - 407
Target Start/End: Original strand, 39283103 - 39283196
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    |||||| ||||||||||||||||||||||| ||  ||||||| |||||||||||||        ||||||||||||||||||||||||||||||    
T  39283103 ttaaatatgtcattggtccctgcactttcaccattttttggcgttggtccctgcactttcttttgtttggcattggtccctgcactttgtaaaa 39283196  T

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Target: chr5; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 369
Target Start/End: Original strand, 13197912 - 13197967
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  13197912 ttaaatgtgtcattggtccatgcactttcatcagattttggcattgatccctgcac 13197967  T

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Target: chr5; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 3023397 - 3023491
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||         ||||||||||||||||| ||||||||||||    
T  3023397 aggtttaaatgtgtcattggttc-tgcactttcatcagattttggtattggtccctgcactttttt---tttggcattggtccctgtactttgtaaaaa 3023491  T

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Target: chr5; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 408
Target Start/End: Complemental strand, 26409047 - 26408953
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  26409047 ttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 26408953  T

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Target: chr5; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 369
Target Start/End: Original strand, 18673907 - 18673968
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||||||| ||||||||||    
T  18673907 taaggtttaaatgtgtcattggtccctacacttttatcatattttggcattcgtccctgcac 18673968  T

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Target: chr5; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 31912701 - 31912800
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| |||| ||| ||| ||||||||||||||||||||| |||| || |||||         |||||||||||||||||||||||||||||||    
T  31912701 aaggtttaaatatgtctttgatccttgcactttcatcagattttggtattgatctctgcatttttttttgtttggcattggtccctgcactttgtaaaaa 31912800  T

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Target: chr5; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 38245156 - 38245057
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| || | || |||| |||||||||||||||||||||||||||||| | |||        |||||| ||||||||||||||||||||||||    
T  38245156 aaggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccatacacttttttttgtttggaattggtccctgcactttgtaaaaa 38245057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 5950866 - 5950770
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||| |||| |||||||||        ||||||||||||||| | |||||||||||||    
T  5950866 ggtttaaatgtgtcattgatcc-tgcactttcattagattttgggattgatccctgcacttgtttttgtttggcattggtccttacactttgtaaaaa 5950770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 18036219 - 18036316
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||  |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||  ||||||||||||||||||||||||    
T  18036219 ggtttaaaaatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaa 18036316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 23910713 - 23910616
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| || | || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||| ||||||    
T  23910713 ggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttataaaaa 23910616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 39412152 - 39412249
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||  || |||| |||||||||||||||||||| ||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  39412152 ggtttaaatatgtatttagtccttgcactttcatcagattttgacattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 39412249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 3578002 - 3578053
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||| |||| || |||||||||||||||||||||||||||||||||||||    
T  3578002 ttaaatatgtctttagtccctgcactttcatcagattttggcattggtccct 3578053  T

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Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 408
Target Start/End: Complemental strand, 4717208 - 4717129
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||| ||||| |||        |||||| ||||||||||||||||||| ||||    
T  4717208 gtccctgcactttcatcagattttggcattgatccctacacttttttttgtttggaattggtccctgcactttgtgaaaa 4717129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 408
Target Start/End: Complemental strand, 17965044 - 17964965
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||| |||||||| ||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  17965044 gtccttgcacttttatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 17964965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 301 - 408
Target Start/End: Complemental strand, 18674271 - 18674164
Alignment:
Q  301 attattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactt 400  Q
    ||||||| | ||||||||| || | || |||| |||||||||||||||||||||||||||||||| |          |||||| ||||||||||||||||    
T  18674271 attatttaagggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacttttttttttgtttggaattggtccctgcactt 18674172  T
Q  401 tgtaaaaa 408  Q
    ||||||||    
T  18674171 tgtaaaaa 18674164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 408
Target Start/End: Original strand, 21747671 - 21747769
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaa 406  Q
    |||||||||||||||||||||||||| | || |||||||||||||| ||||   |||||||||        ||||||||||||||| || ||||||||||    
T  21747671 ttaaggtttaaatgtgtcattggtccttacattttcatcagattttagcat---tccctgcactttttaacgtttggcattggtccatgtactttgtaaa 21747767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 408
Target Start/End: Original strand, 38789967 - 38790046
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||| |||||||||||||||||||| ||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  38789967 gtccttgcactttcatcagattttgacattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 38790046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 2268668 - 2268570
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||| || |||| ||||||||||||||||||||| |||||||||| |||        |||||| |||| ||| |||||||||||||||    
T  2268668 aggtttaaatatgtctttagtccttgcactttcatcagattttggtattggtccctacacttttttttgtttggaattgatccttgcactttgtaaaaa 2268570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 8145085 - 8145031
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||| |||| || |||| ||||||||||||||||||||||||||||||||    
T  8145085 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccct 8145031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 22619846 - 22619792
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||| |||| || |||| ||||||||||||||||||||||||||||||||    
T  22619846 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccct 22619792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 8343043 - 8343096
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||| |||| || |||| ||||||||||||||||||||||||||||||||    
T  8343043 gtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccct 8343096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 339 - 408
Target Start/End: Complemental strand, 3578341 - 3578274
Alignment:
Q  339 tttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||    
T  3578341 tttcatcagattttggcattggtccctgaactttttt--gtttggcattggtccctgcactttgtaaaaa 3578274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 332 - 408
Target Start/End: Complemental strand, 9177251 - 9177175
Alignment:
Q  332 cctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||| |||||||||||||||||| |||        |||||| |||||||||| |||||||||||||    
T  9177251 cctgcactttcatcatattttggcattggtccctacactttattttgtttggaattggtccctccactttgtaaaaa 9177175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 32780863 - 32780923
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgca 368  Q
    ||||| ||||||||||  |||||||||||||||||| |  |||||||||||||||||||||    
T  32780863 taaggcttaaatgtgtgtttggtccctgcactttcaccccattttggcattggtccctgca 32780923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 974236 - 974185
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||| |||| || |||||||||||||||||||||||||| ||||||||||    
T  974236 ttaaatatgtctttagtccctgcactttcatcagattttggtattggtccct 974185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 4621085 - 4620986
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| ||   || |||| |||||||||||||||||||||||||||||||| ||         |||||| |||||||| |||||||||||||||    
T  4621085 aaggtttaaatatgcttttagtccttgcactttcatcagattttggcattggtccctacatttttttttgtttggaattggtccatgcactttgtaaaaa 4620986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 25945742 - 25945643
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||  | | || |||| ||||||||||||||||||||||||||||||||  ||        |||||| |||||||| |||||||||||||||    
T  25945742 aaggtttaaatacgcctttagtccttgcactttcatcagattttggcattggtccctatacttttttttgtttggaattggtccttgcactttgtaaaaa 25945643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 350 - 408
Target Start/End: Original strand, 2268295 - 2268353
Alignment:
Q  350 tttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  2268295 tttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 2268353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 30492252 - 30492198
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||||||||||  || | |||||| |||||||||||||||||||||||    
T  30492252 ggtttaaatgtgtcattgagccatacacttttatcagattttggcattggtccct 30492198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 358
Target Start/End: Original strand, 13667384 - 13667432
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcatt 358  Q
    |||||||||||||||  ||| || |||||||||||||||||||||||||    
T  13667384 aggtttaaatgtgtcgctggaccttgcactttcatcagattttggcatt 13667432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 30491891 - 30491947
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||| |||| || |||| |||||||| |||||||||| ||||||||||||    
T  30491891 aaggtttaaatatgtctttagtccttgcacttttatcagatttttgcattggtccct 30491947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 341
Target Start/End: Complemental strand, 38790304 - 38790272
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcacttt 341  Q
    |||||||||||||||||||||||||||||||||    
T  38790304 aaggtttaaatgtgtcattggtccctgcacttt 38790272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 365
Target Start/End: Original strand, 34929537 - 34929592
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||||| |||| || |||| |||||||||||||||||||| ||||| |||||    
T  34929537 aggtttaaatatgtctttagtccttgcactttcatcagattttgacattgatccct 34929592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 366
Target Start/End: Original strand, 36322924 - 36322975
Alignment:
Q  315 taaatgtgtcattggtccctgcactttcatcagattttggcattggtccctg 366  Q
    ||||| |||||||| ||||||| |||||| || |||||||||||||||||||    
T  36322924 taaatatgtcattgatccctgctctttcaccatattttggcattggtccctg 36322975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 369
Target Start/End: Original strand, 38244854 - 38244910
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||||||||||||  |  |  ||||||||||||||||||||    
T  38244854 ggtttaaatgtgtcattggtccctgcacttttttttg--tttggcattggtccctgcac 38244910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 2033738 - 2033788
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggt 361  Q
    ||||||||| || | || |||| ||||||||||||||||||||||||||||    
T  2033738 ggtttaaatatgcctttagtccttgcactttcatcagattttggcattggt 2033788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 408
Target Start/End: Original strand, 38244890 - 38244920
Alignment:
Q  378 gtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||    
T  38244890 gtttggcattggtccctgcactttgtaaaaa 38244920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 365
Target Start/End: Original strand, 15440517 - 15440574
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||||||| |||  || |||| |||||||| |||||||||||| ||||||||||    
T  15440517 taaggtttaaatatgtatttagtccttgcacttttatcagattttggtattggtccct 15440574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 18674113 - 18674085
Alignment:
Q  380 ttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||    
T  18674113 ttggcattggtccctgcactttgtaaaaa 18674085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 369
Target Start/End: Complemental strand, 21748022 - 21747986
Alignment:
Q  333 ctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  21748022 ctgcactttcatcagattttgacattggttcctgcac 21747986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 51754311 - 51754213
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  51754311 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 51754213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 47358150 - 47358247
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||    
T  47358150 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcaattttttttgtttggcattggtccctgcactttgtaaaaa 47358247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 27957460 - 27957557
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  27957460 ggtttaaatttgtcattgatccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 27957557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 44398289 - 44398192
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||||||    
T  44398289 ggtttaaatgtgtaattggtccctgcactttcatcagattttggcattgatccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 44398192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 304 - 408
Target Start/End: Original strand, 34682272 - 34682378
Alignment:
Q  304 attttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac--nnnnnnnngtttggcattggtccctgcacttt 401  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||          ||||||||||||||||||||||||    
T  34682272 atttaaaggtttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcacttttttttttgtttggcattggtccctgcacttt 34682371  T
Q  402 gtaaaaa 408  Q
    |||||||    
T  34682372 gtaaaaa 34682378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 305 - 408
Target Start/End: Original strand, 38443311 - 38443414
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgta 404  Q
    |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||        |||||||||||||||||||||||||||    
T  38443311 tttttaggtttaaatgtgtcattggtccttgcacttttatcagattttggcattggtctctgcacttttttttgtttggcattggtccctgcactttgta 38443410  T
Q  405 aaaa 408  Q
    ||||    
T  38443411 aaaa 38443414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 40037059 - 40036960
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||        ||||||||||||||||| |||||||||||||    
T  40037059 aaggtttaaatgtgtcattggtccctgcattttcatcaaattttggcattggtccctgcacttttttttgtttggcattggtccctacactttgtaaaaa 40036960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 21441353 - 21441253
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||||||||||||    
T  21441353 aaggtttaaatgtgtcactggtccctgcactttcatcagattttggcattggtccctgcactttttttttgtttggcattggtccctacactttgtaaaa 21441254  T
Q  408 a 408  Q
    |    
T  21441253 a 21441253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 312 - 408
Target Start/End: Complemental strand, 51761180 - 51761084
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||        ||||||||| |||||||||||||||||||||    
T  51761180 gtttaaatgtgtcattggtccctgcactttcatcatattttggcattagtccctgcacttttttttgtttggcatcggtccctgcactttgtaaaaa 51761084  T

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Target: chr3; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 312 - 408
Target Start/End: Complemental strand, 54803416 - 54803320
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||        |||||||||||||||||||||||||||||||    
T  54803416 gtttaaatgtgtcattggtccctgcacttttatcagattttggtattgatccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 54803320  T

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Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 305 - 408
Target Start/End: Complemental strand, 11692577 - 11692474
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgta 404  Q
    |||||| |||||||||||||||||||||||||| |||||||| |||||| ||||||| |||||||        |||||||||||||||||||||||||||    
T  11692577 ttttaaagtttaaatgtgtcattggtccctgcattttcatcaaattttgacattggttcctgcacttttttttgtttggcattggtccctgcactttgta 11692478  T
Q  405 aaaa 408  Q
    ||||    
T  11692477 aaaa 11692474  T

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Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 51436996 - 51437095
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  |||||| |||||||        |||||||||||||||||||||||||||||||    
T  51436996 aaggtttaaatgtgtcattggtccctgcactttaatcagattttgatattggttcctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 51437095  T

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Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 54089838 - 54089937
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||        |||||||||||||||||||||||||| ||||    
T  54089838 aaggtttaaatgtgtcattggtccccgcacttttatcagattttggcattgatccctgcacttttttttgtttggcattggtccctgcactttgttaaaa 54089937  T

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Target: chr3; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 3017587 - 3017486
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac--nnnnnnnngtttggcattggtccctgcactttgtaaa 406  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||          ||||||||||||| |||||||||||||||    
T  3017587 aaggtttaaatgtgtcattggtccctgcattttcatcagattttggcattggtccctgcacttttttttttgtttggcattggttcctgcactttgtaaa 3017488  T
Q  407 aa 408  Q
    ||    
T  3017487 aa 3017486  T

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Target: chr3; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 35565041 - 35565138
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||         | |||||||||||||||||||||||||||||    
T  35565041 aggtttaaatgtgtcattggtccctacactttcatcagattttggcattggtccctgcatttttttttg-ttggcattggtccctgcactttgtaaaaa 35565138  T

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Target: chr3; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 310 - 369
Target Start/End: Original strand, 29352403 - 29352462
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29352403 aggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccctgcac 29352462  T

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Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 369
Target Start/End: Complemental strand, 16222890 - 16222832
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16222890 ggtttaaatgtgtcattggtccctacactttcatcagattttggcattggtccctgcac 16222832  T

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Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 369
Target Start/End: Complemental strand, 23461244 - 23461186
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23461244 ggtttaaatgtgtcattggtccctacactttcatcagattttggcattggtccctgcac 23461186  T

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Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 44638677 - 44638623
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44638677 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 44638623  T

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Target: chr3; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 16732331 - 16732234
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||||||| ||||||        |||||||||||||||||||||||| ||||||    
T  16732331 ggtttaaatgtgtcattggtccttgcactttcatcaaatgttggcattggtctctgcacttttttttgtttggcattggtccctgcactttataaaaa 16732234  T

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Target: chr3; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 49665329 - 49665426
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| ||||||||||||||||||| ||||  ||||||||||||||| |||||        |||||||||||||||||||||||||||||||    
T  49665329 ggtttaaatgtatcattggtccctgcacttttatcattttttggcattggtccatgcacttttttttgtttggcattggtccctgcactttgtaaaaa 49665426  T

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Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 369
Target Start/End: Complemental strand, 19988280 - 19988223
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19988280 gtttaaacgtgtcattggtccctgcactttcttcagattttggcattggtccctgcac 19988223  T

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Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 21560798 - 21560895
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||  ||||| |||||| |||| |||||||||||| |||||||||        |||||||||||||||||||||||||||||||    
T  21560798 ggtttaaatgtgtcattattccctccacttttatcatattttggcattgatccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 21560895  T

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Target: chr3; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 47982363 - 47982459
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| |||| |||||||||        ||||||||||||||||| |||||||||||||    
T  47982363 ggtttaaatgtatcattggtccctgcactttcatcaaattttggtattgatccctgcac-tttttttgtttggcattggtccctacactttgtaaaaa 47982459  T

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Target: chr3; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 47991650 - 47991746
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| |||| |||||||||        ||||||||||||||||| |||||||||||||    
T  47991650 ggtttaaatgtatcattggtccctgcactttcatcaaattttggtattgatccctgcac-tttttttgtttggcattggtccctacactttgtaaaaa 47991746  T

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Target: chr3; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 48000937 - 48001033
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| |||| |||||||||        ||||||||||||||||| |||||||||||||    
T  48000937 ggtttaaatgtatcattggtccctgcactttcatcaaattttggtattgatccctgcac-tttttttgtttggcattggtccctacactttgtaaaaa 48001033  T

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Target: chr3; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 48010224 - 48010320
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| |||||||||||||||||||||||| ||||||| |||| |||||||||        ||||||||||||||||| |||||||||||||    
T  48010224 ggtttaaatgtatcattggtccctgcactttcatcaaattttggtattgatccctgcac-tttttttgtttggcattggtccctacactttgtaaaaa 48010320  T

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Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 366
Target Start/End: Complemental strand, 31705512 - 31705457
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctg 366  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  31705512 ggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggttcctg 31705457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 302 - 407
Target Start/End: Complemental strand, 26921001 - 26920896
Alignment:
Q  302 ttattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcacttt 401  Q
    |||||||  ||||| |||||||||||||||| |||||||| |||||||||||||||| || |||||||        |||||||||||||||||||| |||    
T  26921001 ttattttttggttttaatgtgtcattggtccatgcacttttatcagattttggcatttgttcctgcacttttttttgtttggcattggtccctgcatttt 26920902  T
Q  402 gtaaaa 407  Q
     |||||    
T  26920901 ataaaa 26920896  T

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Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 408
Target Start/End: Complemental strand, 19988237 - 19988153
Alignment:
Q  324 cattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||         |||||||||||||| || ||||||||||||    
T  19988237 cattggtccctgcactttcttcagattttggcattggtccctgcacttttttttatttggcattggtccatgtactttgtaaaaa 19988153  T

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Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 369
Target Start/End: Original strand, 26050499 - 26050555
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  26050499 tttaaatgtgtcattggtccctaaactttcatcagattttggcattggtcactgcac 26050555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 408
Target Start/End: Original strand, 44397922 - 44398022
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    |||||||||||| ||   || |||| |||||||||||||||||||||||||||||||| |||        |||||| |||||||||||||||||||||||    
T  44397922 taaggtttaaatatgcatttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaa 44398021  T
Q  408 a 408  Q
    |    
T  44398022 a 44398022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 312 - 408
Target Start/End: Complemental strand, 47358568 - 47358472
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||| || | || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  47358568 gtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 47358472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 19987833 - 19987932
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||| |||||| |||| || ||||||||||||||||||||||||||||||||||||| ||         |||||  ||||||||||||||||||||||||    
T  19987833 aaggcttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacatgtttttttgtttgaaattggtccctgcactttgtaaaaa 19987932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 29352737 - 29352638
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| |||| || |||| |||||||||||||||||||||||||| ||||| |||        |||||| ||||||| ||||||||||||||||    
T  29352737 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattgatccctacacttttttttgtttggaattggtctctgcactttgtaaaaa 29352638  T

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Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 40790807 - 40790905
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| |||| || |||| |||||||||||||||||||||||||||||||| ||         |||||| ||||||||||||||||||||||||    
T  40790807 aaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctaca-ttttttttgtttggaattggtccctgcactttgtaaaaa 40790905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 314 - 369
Target Start/End: Original strand, 52836632 - 52836687
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  52836632 ttaaatgtgtcattggtccctgcactttcatcagattttaatattggtccctgcac 52836687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 311 - 362
Target Start/End: Complemental strand, 55328851 - 55328800
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtc 362  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  55328851 ggtttaaatgtgtcattagtccctgcactttcatcagattttgacattggtc 55328800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 21440967 - 21441065
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||| ||  ||| |||||||||||||||||||||||||| ||||| |||        |||||| ||||||||||||||||||||||||    
T  21440967 aggtttaaatatgtctttaatccttgcactttcatcagattttggcattgatccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 21441065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 408
Target Start/End: Complemental strand, 21561217 - 21561115
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaa 405  Q
    ||||||||||||| || | || |||| |||||||||||||||||||||||||||||||| |||         |||||| |||||||||||||||||||||    
T  21561217 ttaaggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaa 21561118  T
Q  406 aaa 408  Q
    |||    
T  21561117 aaa 21561115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 35565485 - 35565387
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||| || |||| |||||||||||||||||||||||||||||| | |||        |||||  ||||||||||||||||||||||||    
T  35565485 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccatacacttttttttgtttgaaattggtccctgcactttgtaaaaa 35565387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 40393460 - 40393557
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||         |||||||||||||| ||||||||||||||||    
T  40393460 ggtttaaatgtgtcatta-tccctgcactttcatcaaattttgacattggtccctgcacttttattttgtttggcattggtctctgcactttgtaaaaa 40393557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 406
Target Start/End: Original strand, 30427389 - 30427490
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgta 404  Q
    |||| |||||||||||| |  || |||||||||||||||||  |||||||| |||||||||||||        |||||||||||||||||||||||| ||    
T  30427389 tttttaggtttaaatgtttgtttagtccctgcactttcatccaattttggctttggtccctgcacttttttttgtttggcattggtccctgcactttata 30427488  T
Q  405 aa 406  Q
    ||    
T  30427489 aa 30427490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 408
Target Start/End: Original strand, 23460942 - 23461038
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||| || | || |||| |||||||| ||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  23460942 gtttaaatatgcctttagtccttgcacttttatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 23461038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 408
Target Start/End: Original strand, 51753892 - 51753992
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    |||||||| ||| |||| || |||| ||||||||||||||||||||| |||||||||| |||        |||||| ||||| |||||||||||||||||    
T  51753892 taaggttttaatatgtctttagtccttgcactttcatcagattttggtattggtccctacacttttttttgtttggaattggcccctgcactttgtaaaa 51753991  T
Q  408 a 408  Q
    |    
T  51753992 a 51753992  T

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Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 11692153 - 11692252
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| || | || |||| |||||||||||||||||||| |||||||| || |||        |||||| ||||||||||||||||||||||||    
T  11692153 aaggtttaaatatgcctttagtccttgcactttcatcagattttgacattggtctctacacttttttttgtttggaattggtccctgcactttgtaaaaa 11692252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 408
Target Start/End: Original strand, 16222472 - 16222571
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    ||||| |||||| || | || |||||||||||||||||| |||||||||||||||||| |||        |||||| |||||||||||||||||||||||    
T  16222472 taaggcttaaatatgcctttagtccctgcactttcatcaaattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgtaaaa 16222570  T

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Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 44638411 - 44638510
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| || | || |||| |||||||| ||||||||||||||||||||||| |||        |||||| |||||||| |||||||||||||||    
T  44638411 aaggtttaaatatgcctttagtccttgcacttttatcagattttggcattggtccctacacttttttttgtttggaattggtccatgcactttgtaaaaa 44638510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 49665710 - 49665611
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||| || |||| ||||||||||||||||||||||||||| |||| |||         |||||| ||||||||||||||||||||||||    
T  49665710 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggcccctacactttttttttgtttggaattggtccctgcactttgtaaaaa 49665611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 369
Target Start/End: Complemental strand, 54090223 - 54090164
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||| |||| || |||| ||||||||||| ||||||||||||||||||||||||    
T  54090223 aggtttaaatatgtctttagtccttgcactttcattagattttggcattggtccctgcac 54090164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 3017251 - 3017349
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttc-atcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||| || |||| ||||||||| ||||||||||||||||||||||| |||        |||||  ||||||||||||||||||||||||    
T  3017251 ggtttaaatatgtctttagtccttgcactttcgatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaa 3017349  T

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Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 33092389 - 33092336
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  33092389 ggtttaaatgtgtcattggtccctgcactttcatca-aatttggtattggtccct 33092336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 27957876 - 27957820
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||| || | || |||| ||||||||||||||||||||||||||||||||    
T  27957876 aaggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccct 27957820  T

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Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 33092032 - 33092088
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||| |||| || |||| |||||||||||||| |||||||||||||||||    
T  33092032 aaggtttaaatatgtctttagtccttgcactttcatcagtttttggcattggtccct 33092088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 47982742 - 47982644
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| || | || |||| ||||||||||||| |||||||||||||||||| |||        |||||  |||||||| |||||||||||||||    
T  47982742 aggtttaaatatgcctttagtccttgcactttcatcatattttggcattggtccctacacttttttttgtttgaaattggtccatgcactttgtaaaaa 47982644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 47992029 - 47991931
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| || | || |||| ||||||||||||| |||||||||||||||||| |||        |||||  |||||||| |||||||||||||||    
T  47992029 aggtttaaatatgcctttagtccttgcactttcatcatattttggcattggtccctacacttttttttgtttgaaattggtccatgcactttgtaaaaa 47991931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 48001316 - 48001218
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| || | || |||| ||||||||||||| |||||||||||||||||| |||        |||||  |||||||| |||||||||||||||    
T  48001316 aggtttaaatatgcctttagtccttgcactttcatcatattttggcattggtccctacacttttttttgtttgaaattggtccatgcactttgtaaaaa 48001218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 48010603 - 48010505
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| || | || |||| ||||||||||||| |||||||||||||||||| |||        |||||  |||||||| |||||||||||||||    
T  48010603 aggtttaaatatgcctttagtccttgcactttcatcatattttggcattggtccctacacttttttttgtttgaaattggtccatgcactttgtaaaaa 48010505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 29015718 - 29015815
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||| || |||| ||||||||||| |||||||| ||||||||||| |||         ||||  ||||||||||||||||||||||||    
T  29015718 ggtttaaatatgtctttagtccttgcactttcattagattttgacattggtccctacacttttttttatttgtaattggtccctgcactttgtaaaaa 29015815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 358
Target Start/End: Original strand, 3192121 - 3192165
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcatt 358  Q
    ||||||||||||||||||| |||||||||| || |||||||||||    
T  3192121 ttaaatgtgtcattggtccttgcactttcaccaaattttggcatt 3192165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 16731937 - 16731973
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccct 365  Q
    |||| ||||||||||||||||||||||||||||||||    
T  16731937 gtccttgcactttcatcagattttggcattggtccct 16731973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 40393798 - 40393742
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccc 364  Q
    |||||||||||| |||| || ||||  ||||||| ||||||||||||||||||||||    
T  40393798 taaggtttaaatatgtctttagtcctcgcacttttatcagattttggcattggtccc 40393742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 408
Target Start/End: Complemental strand, 29016041 - 29016011
Alignment:
Q  378 gtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||    
T  29016041 gtttggcattggtccctgcactttgtaaaaa 29016011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 341
Target Start/End: Original strand, 51760822 - 51760852
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcacttt 341  Q
    |||||||||||||||||||||||||||||||    
T  51760822 ggtttaaatgtgtcattggtccctgcacttt 51760852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 54090183 - 54090154
Alignment:
Q  379 tttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||    
T  54090183 tttggcattggtccctgcactttgtaaaaa 54090154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 47429603 - 47429559
Alignment:
Q  324 cattggtccctgcactttcatcagattttggcattggtccctgca 368  Q
    ||||||||| |||||||||||||||||||| ||||  ||||||||    
T  47429603 cattggtccttgcactttcatcagattttgacattcctccctgca 47429559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 14125 - 14222
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  14125 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 14222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 14539 - 14441
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| || | || |||| ||||||||||||||||||||| |||||||||| |||        |||||  ||||||||||||||||||||||||    
T  14539 aggtttaaatatgcctttagtccttgcactttcatcagattttggtattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaa 14441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 8e-34; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 9565996 - 9566093
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  9565996 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 9566093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 33360446 - 33360544
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||    
T  33360446 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggtattggtccctgcactttgtaaaaa 33360544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 17203865 - 17203962
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||    
T  17203865 ggtttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 17203962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 21905472 - 21905375
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||||    
T  21905472 ggtttaaatgtgtcattggtccctgcactttcatcagattttgccattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 21905375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 33243169 - 33243266
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  33243169 ggtttaaatgtgtcattggtccctgcattttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 33243266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 308 - 408
Target Start/End: Original strand, 6389909 - 6390009
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||        ||||||||||||||||||||||||||||||    
T  6389909 taaggtttaaatgtgtcattggtccctgcactttcatcagattttgatattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaa 6390008  T
Q  408 a 408  Q
    |    
T  6390009 a 6390009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 5997192 - 5997290
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||        |||||||||||||||||||||||||||||||    
T  5997192 aggtttaaatgtgtcattggtccctgcactttcatcaaattttggcattggtccctgtacttttttttgtttggcattggtccctgcactttgtaaaaa 5997290  T

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Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 10143209 - 10143307
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  10143209 aaggtttaaatgtctcattggtccctgcactttcatcagattttggcattggtccctgcac-tttttttgtttggcattggtccctgcactttgtaaaaa 10143307  T

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Target: chr6; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 2793034 - 2793131
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||| |||||||||||||||    
T  2793034 ggtttaaatgtgtcattggtccctgcactttcatcatattttggcattggtccctgcacttttttttgtttggcattggtccttgcactttgtaaaaa 2793131  T

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Target: chr6; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 22695555 - 22695652
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        ||||||||||||||| |||||||||||||||    
T  22695555 ggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcacttttttttgtttggcattggtccttgcactttgtaaaaa 22695652  T

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Target: chr6; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 307 - 408
Target Start/End: Complemental strand, 33706218 - 33706117
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaa 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||        ||||||||||||||||| |||||||||||    
T  33706218 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattagtctctgcacttttttttgtttggcattggtccctacactttgtaaa 33706119  T
Q  407 aa 408  Q
    ||    
T  33706118 aa 33706117  T

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Target: chr6; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 311 - 403
Target Start/End: Original strand, 1827056 - 1827148
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgt 403  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||    
T  1827056 ggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgt 1827148  T

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Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 310 - 404
Target Start/End: Original strand, 605476 - 605570
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgta 404  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||        |||||||||||||||||||||||||||    
T  605476 aggtttaaatgtgtcattggtccttgcacttccatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgta 605570  T

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Target: chr6; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 16120401 - 16120498
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||        |||||||||||||||||||||||||||||||    
T  16120401 ggtttaaatgtgtcattggtccctgcactttcatcagacttcggcattggtccttgcacttttttttgtttggcattggtccctgcactttgtaaaaa 16120498  T

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Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 16409154 - 16409057
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||||    
T  16409154 ggtttaaatgtgtcattgattcctgcactttcatcagattttgacattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 16409057  T

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Target: chr6; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 313 - 408
Target Start/End: Complemental strand, 6535791 - 6535695
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgca-cnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||    
T  6535791 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcattttttttttgtttggcattggtccctgcactttgtaaaaa 6535695  T

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Target: chr6; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 316 - 408
Target Start/End: Complemental strand, 32219254 - 32219162
Alignment:
Q  316 aaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||    
T  32219254 aaatgtgtcattggtccttgcactttcatcagattttggcattggtccctgcacttttttttgtttggtattggtccctgcactttgtaaaaa 32219162  T

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Target: chr6; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 300 - 399
Target Start/End: Complemental strand, 16120635 - 16120536
Alignment:
Q  300 tattattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcact 399  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||        ||||||||||||||||||||||    
T  16120635 tattattttttggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggttcttgcacttttttttgtttggcattggtccctgcact 16120536  T

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Target: chr6; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 303 - 365
Target Start/End: Original strand, 3199299 - 3199361
Alignment:
Q  303 tattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3199299 tatttaaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 3199361  T

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Target: chr6; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 12395662 - 12395760
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||         |||| ||||| |||||||||||||||||||    
T  12395662 aggtttaaatgtgtcattggtccctgcacttttatcagattttggcattggtccatgcacttttttttatttgacattgatccctgcactttgtaaaaa 12395760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 14631144 - 14631047
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||        ||||||||||| || ||||||||||||||||    
T  14631144 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattgatctctgcac-tttttttgtttggcattgatctctgcactttgtaaaaa 14631047  T

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Target: chr6; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 6390328 - 6390229
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||| |||||| |||| || ||||||||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  6390328 aaggcttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 6390229  T

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Target: chr6; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 584078 - 583980
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||| |||||||| ||||||||||||| ||||||||||||| ||||| ||||        |||||||||| ||||||||||||||||||||    
T  584078 aggtttaaatgtatcattggttcctgcactttcattagattttggcattcgtcccagcacttttttttgtttggcattagtccctgcactttgtaaaaa 583980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 369
Target Start/End: Complemental strand, 21003192 - 21003127
Alignment:
Q  304 attttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||    
T  21003192 atttaaaggtttaaatgtgtcattggtccctgcactttcatcagattttgatattgatccctgcac 21003127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 33705801 - 33705898
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| |||| |||||||||||||||||||    
T  33705801 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattgttccctgcactttgtaaaaa 33705898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 314 - 408
Target Start/End: Complemental strand, 2182319 - 2182225
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||| |||||||| ||||||| |||| |||||||||        ||||||  || ||||||||||||||||||||    
T  2182319 ttaaatgtgtcattggtccctgcaatttcatcatattttgggattgatccctgcacttttttttgtttggttttagtccctgcactttgtaaaaa 2182225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 21002768 - 21002865
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| |||| ||| |||||||||||||||    
T  21002768 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacatttttttgtttggaattgatccatgcactttgtaaaaa 21002865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 329 - 408
Target Start/End: Complemental strand, 5997588 - 5997508
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||| |||         |||||| ||||||||||||||||||||||||    
T  5997588 gtccctgcactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaaa 5997508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 408
Target Start/End: Complemental strand, 605858 - 605756
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac--nnnnnnnngtttggcattggtccctgcactttgtaa 405  Q
    |||||||||||| |||| || |||| |||||||||||||||||||||||||| ||||| |||          |||||| |||||||||||||||||||||    
T  605858 taaggtttaaatatgtctttagtccttgcactttcatcagattttggcattgatccctacacttttttttttgtttggaattggtccctgcactttgtaa 605759  T
Q  406 aaa 408  Q
    |||    
T  605758 aaa 605756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 9566459 - 9566360
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| |||| || |||| |||||||||||||||||||| ||||||||||| |||        |||||| ||| |||| |||||||||||||||    
T  9566459 aaggtttaaatatgtctttagtccttgcactttcatcagattttgacattggtccctacacttttttttgtttggaatttgtccatgcactttgtaaaaa 9566360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 12396078 - 12395979
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||| || |||| |||||||| ||||||||||||||||||||||| |||         ||||| |||||||||||||||||||||||||    
T  12396078 aggtttaaatatgtctttagtccttgcactttaatcagattttggcattggtccctacactttttttttgtttgacattggtccctgcactttgtaaaaa 12395979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 14630812 - 14630911
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| || | || |||| |||||||||||||||||||||||||||||||| |||         |||||| ||||||||||||||||||||||||    
T  14630812 aggtttaaatatgcctttagtccttgcactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaaa 14630911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 22696001 - 22695902
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| || | || |||| ||||||||||| ||||||||||||||||| || |||        |||||| ||||||||||||||||||||||||    
T  22696001 aaggtttaaatatgcctttagtccttgcactttcattagattttggcattggtctctacacttttttttgtttggaattggtccctgcactttgtaaaaa 22695902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 33360865 - 33360766
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| |||| || |||  |||||||||||||||||||| ||||||||||| |||        |||||| |||||||||| |||||||||||||    
T  33360865 aaggtttaaatatgtctttagtcgttgcactttcatcagattttgacattggtccctacacttttttttgtttggaattggtccctacactttgtaaaaa 33360766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 329 - 408
Target Start/End: Original strand, 583678 - 583759
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcac--nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||| ||||||||||||||||||||||||||||||||||||          |||||| ||||||||||||||||||||||||    
T  583678 gtccttgcactttcatcagattttggcattggtccctgcacttttttttttgtttggaattggtccctgcactttgtaaaaa 583759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 6535408 - 6535461
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||| |||| || |||| ||||||||||||||||||||||||||||||||    
T  6535408 gtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccct 6535461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 408
Target Start/End: Original strand, 33877785 - 33877886
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaa 406  Q
    ||||||||||||| || | || |||| | |||||||||||||||||||||||||||||| |||        |||||| |||||||  |||||||||||||    
T  33877785 ttaaggtttaaatatgcctttagtccttacactttcatcagattttggcattggtccctacacttttttttgtttggaattggtcagtgcactttgtaaa 33877884  T
Q  407 aa 408  Q
    ||    
T  33877885 aa 33877886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 5146816 - 5146872
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||| |||| || |||| ||||||||||| ||||||||||||||||||||    
T  5146816 aaggtttaaatatgtctttagtccttgcactttcattagattttggcattggtccct 5146872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 329 - 408
Target Start/End: Original strand, 32218860 - 32218940
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||| |||||||||||||||||||||||||||||||| |||         |||||| ||||||||||||||||||||||||    
T  32218860 gtccttgcactttcatcagattttggcattggtccctacacttttcttttgtttggaattggtccctgcactttgtaaaaa 32218940  T

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Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 369
Target Start/End: Original strand, 3371338 - 3371393
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||| ||||||||||||||||||   ||||||||| ||||||||||||||    
T  3371338 ttaaatgtgtaattggtccctgcactttcgcaagattttggtattggtccctgcac 3371393  T

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Target: chr6; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 408
Target Start/End: Complemental strand, 17204257 - 17204178
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||| ||||| |||||| |||        |||||| |||||||||| |||||||||||||    
T  17204257 gtccctgcactttcatcagattttagcattcgtccctacactttattttgtttggaattggtccctacactttgtaaaaa 17204178  T

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Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 408
Target Start/End: Complemental strand, 33243566 - 33243487
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||| |||||||||||||||||||||||||||||||| ||          ||||| ||||||||||||||||||||||||    
T  33243566 gtccttgcactttcatcagattttggcattggtccctacatttttttttttttggaattggtccctgcactttgtaaaaa 33243487  T

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Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 21904865 - 21904962
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||| || |||| ||||||||||||||||||||| ||| |||||| ||         |||||| ||||||| ||||||||||||||||    
T  21904865 ggtttaaatatgtctttagtccttgcactttcatcagattttggtattagtccctacaattttttttgtttggaattggtctctgcactttgtaaaaa 21904962  T

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Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 367
Target Start/End: Original strand, 12403224 - 12403279
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgc 367  Q
    ||||||||| |||||||| ||||||||||||||||| | |||| |||||||||||||    
T  12403224 ggtttaaatatgtcattgatccctgcactttcatcata-tttgacattggtccctgc 12403279  T

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Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 314 - 369
Target Start/End: Complemental strand, 14410319 - 14410264
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||| ||| |||| |||||||||||||| |||||| |||||| |||||||    
T  14410319 ttaaatgtgtaattagtccttgcactttcatcagtttttgggattggttcctgcac 14410264  T

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Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 3199605 - 3199551
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||| |||| || |||| | |||||| |||||||||||||||||||||||    
T  3199605 ggtttaaatatgtctttagtccttacacttttatcagattttggcattggtccct 3199551  T

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Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 408
Target Start/End: Complemental strand, 33878025 - 33877995
Alignment:
Q  378 gtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||    
T  33878025 gtttggcattggtccctgcactttgtaaaaa 33877995  T

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Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 14444965 - 14444932
Alignment:
Q  332 cctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||||||||||||||| ||||||||||    
T  14444965 cctgcactttcatcagattttggtattggtccct 14444932  T

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Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 5997424 - 5997396
Alignment:
Q  380 ttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||    
T  5997424 ttggcattggtccctgcactttgtaaaaa 5997396  T

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Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 12514300 - 12514248
Alignment:
Q  317 aatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||||||||||||||||| | ||  ||||||||||| ||| |||||    
T  12514300 aatgtgtcattggtccctgcactttaaccaatttttggcattgatccatgcac 12514248  T

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Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 4903013 - 4902914
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||||||||||||    
T  4903013 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggaattggtccctgcactttgtaaaaa 4902914  T

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Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 40691698 - 40691600
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||| |||||||||||||||    
T  40691698 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccatgcactttgtaaaaa 40691600  T

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Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 42814369 - 42814272
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||        |||||||||||||||||||||||||||||||    
T  42814369 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattagtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 42814272  T

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Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 305 - 408
Target Start/End: Original strand, 970431 - 970534
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgta 404  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||    
T  970431 ttttatggtttaaatgtgtaattggtccctgcactttcatcagattttggcattgatccctgcacttttttttgtttggcattggtccctgcactttgta 970530  T
Q  405 aaaa 408  Q
    ||||    
T  970531 aaaa 970534  T

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Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 408
Target Start/End: Complemental strand, 18478704 - 18478609
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  18478704 tttaaatgtgtcattggtccctggactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 18478609  T

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Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 33850451 - 33850550
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||||||    
T  33850451 aaggtttaaatgtgtaattggtccctgcactttcatcagattttggcattgatccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 33850550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 430933 - 430835
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||| ||||||||| |||||||||||||||    
T  430933 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttgacattggtccttgcactttgtaaaaa 430835  T

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Target: chr2; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 306 - 408
Target Start/End: Original strand, 3963048 - 3963150
Alignment:
Q  306 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaa 405  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||        ||||||||||||||||||||||||||||    
T  3963048 tttaaggtttaaatgtgtcattggtccctgcattttcatcaaattttgacattggtccctgcacttttttttgtttggcattggtccctgcactttgtaa 3963147  T
Q  406 aaa 408  Q
    |||    
T  3963148 aaa 3963150  T

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Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 4902621 - 4902719
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||||    
T  4902621 aaggtttaaatgtgtcattggtccctgcactttcatcagattttgtcattggtccctgcac-tttttttgtttggcattggtccctgcactttgtaaaaa 4902719  T

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Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 4950019 - 4950117
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||||    
T  4950019 aaggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcac-tttttttgtttggcattggtccctgcactttgtaaaaa 4950117  T

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Target: chr2; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 32504394 - 32504297
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||| ||||| |||||||||||||||||||    
T  32504394 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttgacattgatccctgcactttgtaaaaa 32504297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 34826097 - 34826000
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        |||||| ||||||||||||||||||||||||    
T  34826097 ggtttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgcacttttttttgtttggtattggtccctgcactttgtaaaaa 34826000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 310 - 404
Target Start/End: Original strand, 9776970 - 9777065
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgta 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||    
T  9776970 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcactttttttttgtttggcattggtccctgcactttgta 9777065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 369
Target Start/End: Complemental strand, 2098685 - 2098620
Alignment:
Q  304 attttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2098685 atttaaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 2098620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 4831531 - 4831434
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||        |||||||||||||||||||||||||||||||    
T  4831531 ggtttaaatgtgtcattggtccctgcactttcatcatattttgacatttgtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 4831434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 11108407 - 11108504
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||        |||||||||||||||||| ||||||||||||    
T  11108407 ggtttaaatgtgtcattggtccctacactttcatcagattttggcattgatccctgcacttttttacgtttggcattggtccctgtactttgtaaaaa 11108504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 32654230 - 32654133
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||        |||||||||||||||||||||||||||||||    
T  32654230 aggtttaaatgtgtcattggtccctgcactttcatcagattttgatattggtccctgcac-tttttttgtttggcattggtccctgcactttgtaaaaa 32654133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 14102989 - 14102890
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||| |||||||||||||||||||||||||||||||| |||||| |||||||| ||||||        |||||||||||||||||||||||||||||||    
T  14102989 aaggtataaatgtgtcattggtccctgcactttcatcaaattttgacattggtctctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 14102890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 14827910 - 14827812
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||         ||||| ||| |||||||||||||||||||||    
T  14827910 aggtttaaatgtgtcattggtccttgcactttcatcagattttggcattggtccctgcagttttttttgtttgacatcggtccctgcactttgtaaaaa 14827812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 8031432 - 8031335
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||        |||||||||||||||||| ||||||||||||    
T  8031432 ggtttaaatgtgtcattggtccttgcattttcatcagattttgacattggtccctgcacttttttttgtttggcattggtccctgtactttgtaaaaa 8031335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 313 - 401
Target Start/End: Original strand, 18707495 - 18707584
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcacttt 401  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||    
T  18707495 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcactttttttttgtttggcattggtccctgcacttt 18707584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 16265583 - 16265643
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  16265583 aaggtttaaatgtgtcattggtccctgcactttcatcagattttgacattggtccctgcac 16265643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 310 - 369
Target Start/End: Original strand, 45002844 - 45002903
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  45002844 aggtttaaatgtgtcattggtccctgcactctcatcagattttggcattggtccctgcac 45002903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 18907338 - 18907240
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||| ||||||||| |||||||||||  ||||||||||||||        ||||||||||||| |||||||||||||||||    
T  18907338 aggtttaaatgtgtcattggtctctgcacttttatcagattttgatattggtccctgcacttttttttgtttggcattggttcctgcactttgtaaaaa 18907240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 369
Target Start/End: Original strand, 32927710 - 32927768
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32927710 ggtttaaatatgtcattggtccctgcactttcatcagattttggcattggtccctgcac 32927768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 306 - 408
Target Start/End: Complemental strand, 32928132 - 32928030
Alignment:
Q  306 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaa 405  Q
    |||||||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| |||||||||||||||||||||    
T  32928132 tttaaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaa 32928033  T
Q  406 aaa 408  Q
    |||    
T  32928032 aaa 32928030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 39060785 - 39060687
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||        |||||||||| |||| |||||||||||||||    
T  39060785 aggtttaaatgtgtcattggtccctgcaattttatcagattttgacattggtccctgcacttttttttgtttggcattagtccatgcactttgtaaaaa 39060687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 408
Target Start/End: Original strand, 5673989 - 5674092
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgta 404  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||         ||| |||||||||| |||||||||||    
T  5673989 tttttaggtttaaatgtgtcattggtccctgcacttttatcagattttgacattggtccctacactattttttatttagcattggtccttgcactttgta 5674088  T
Q  405 aaaa 408  Q
    ||||    
T  5674089 aaaa 5674092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 369
Target Start/End: Complemental strand, 41186660 - 41186601
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  41186660 aggtttaaatgtgtcgttggtccctgcactttcatcagattttgacattggtccctgcac 41186601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 313 - 408
Target Start/End: Complemental strand, 9777383 - 9777288
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  9777383 tttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 9777288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 368
Target Start/End: Complemental strand, 9791613 - 9791550
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgca 368  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  9791613 ttttatggtttaaatgtgtcattgatccctgcactttcatcagattttggtattgatccctgca 9791550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 28625878 - 28625823
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgca 368  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  28625878 tttaaatgtgtcattggtcgctgcactttcatcagattttgacattggtccctgca 28625823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 408
Target Start/End: Original strand, 41186238 - 41186346
Alignment:
Q  298 aatattattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgca 397  Q
    ||||||||||  |||||||||| |||| ||||||| ||||||||||||||||||||||||||||| || |||        |||||  |||||||||||||    
T  41186238 aatattattt--aggtttaaatatgtctttggtccatgcactttcatcagattttggcattggtctctacacttttttttgtttgaaattggtccctgca 41186335  T
Q  398 ctttgtaaaaa 408  Q
    |||||||||||    
T  41186336 ctttgtaaaaa 41186346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 408
Target Start/End: Original strand, 18906927 - 18907021
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||| |||| || ||||||||||||||||||||||||||||||||||||| |||        |||||| |||||||||| |||||||||||||    
T  18906927 ttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacactttattttgtttggaattggtccctacactttgtaaaaa 18907021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 40691395 - 40691493
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||| || |||| |||||||||||||||||||||||||||||||| ||         |||||| ||||||||||||||||||||||||    
T  40691395 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacatttttttttgtttggaattggtccctgcactttgtaaaaa 40691493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 329 - 408
Target Start/End: Complemental strand, 11108802 - 11108723
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||| |||        |||| | ||||||||||||||||||||||||    
T  11108802 gtccctgcactttcatcagattttggcattggtccctacacttttttttgtttagaattggtccctgcactttgtaaaaa 11108723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 329 - 408
Target Start/End: Original strand, 32653832 - 32653911
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  32653832 gtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 32653911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 312 - 407
Target Start/End: Original strand, 430574 - 430668
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    |||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| |||||||||||||||||||||||    
T  430574 gtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgtaaaa 430668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 312 - 408
Target Start/End: Complemental strand, 3952326 - 3952230
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||| |||| || |||| |||||||||||||||||||||||||||||| | |||        |||||  ||||||||||||||||||||||||    
T  3952326 gtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccatacacttttttttgtttgaaattggtccctgcactttgtaaaaa 3952230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 408
Target Start/End: Complemental strand, 18707939 - 18707839
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    |||||||||||| |||| || |||| ||||||||||||||||||||||||||||| || |||        |||||| |||| ||| ||||||||||||||    
T  18707939 taaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtctctacacttttttttgtttggaattgatccttgcactttgtaaaa 18707840  T
Q  408 a 408  Q
    |    
T  18707839 a 18707839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 406
Target Start/End: Original strand, 39060409 - 39060501
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaa 406  Q
    |||||| |||| || |||||||||||||||||||||||||| ||||||||||||||         ||||| |||||||| |||||||||||||    
T  39060409 ttaaatatgtctttagtccctgcactttcatcagattttggtattggtccctgcacttttttttttttggaattggtccatgcactttgtaaa 39060501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 365
Target Start/End: Complemental strand, 42435064 - 42435008
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||| |||||| ||||||| ||| |||||||||||||||||||||||||||||||||    
T  42435064 aaggcttaaatatgtcattagtctctgcactttcatcagattttggcattggtccct 42435008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 970853 - 970754
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| ||   || |||| |||||||||||||||||||||||||||||||| |||        |||||  ||||||||||||||||||||||||    
T  970853 aaggtttaaatatgcatttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaa 970754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 350
Target Start/End: Original strand, 19591442 - 19591481
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagatt 350  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19591442 ggtttaaatgtgtcattggtccctgcactttcatcagatt 19591481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 32503978 - 32504077
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||| || |||| | |||||||||||||||||||||||||||||| |||         |||||| ||||||||||||||||||||||||    
T  32503978 aggtttaaatatgtctttagtccttacactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaaa 32504077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 408
Target Start/End: Complemental strand, 33850849 - 33850770
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||| ||||||||||||||||||||||||||| |||| |||        |||||| ||||||||||||||||||||||||    
T  33850849 gtccttgcactttcatcagattttggcattggcccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 33850770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 2098291 - 2098389
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| ||||||| |||| | || ||||||||||||||| ||||||||||| |||        |||||| |||||||| |||||||||||||||    
T  2098291 aggtttaaatatgtcattagtccttacattttcatcagattttgacattggtccctacactttcttttgtttggtattggtccatgcactttgtaaaaa 2098389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 28625462 - 28625562
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac--nnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    |||||||||| |||| ||  |||||||||||||||| |||||||||||| ||||||||||          ||||||||||||||| ||||||||||||||    
T  28625462 aggtttaaatatgtctttactccctgcactttcatcggattttggcattagtccctgcacttttttttttgtttggcattggtccatgcactttgtaaaa 28625561  T
Q  408 a 408  Q
    |    
T  28625562 a 28625562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 369
Target Start/End: Original strand, 3951947 - 3952006
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||| |||||| ||  |||||||||||||||||||| |||||||| ||||||    
T  3951947 aggtttaaatgtctcattgatctatgcactttcatcagattttgacattggtctctgcac 3952006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 358
Target Start/End: Complemental strand, 3963442 - 3963391
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcatt 358  Q
    |||||| |||||| |||| || ||||||||||||||||||||||||||||||    
T  3963442 ttaaggcttaaatatgtctttagtccctgcactttcatcagattttggcatt 3963391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 408
Target Start/End: Original strand, 7900278 - 7900356
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||| |||||||||||| |||        |||||| |||||| |||||||||||||||||    
T  7900278 gtccctgcactttcatcagattttagcattggtccctacacttttttttgtttggaattggt-cctgcactttgtaaaaa 7900356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 309 - 407
Target Start/End: Original strand, 14827496 - 14827594
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    ||||||||||| || | || |||| ||||||||||||||||||||| ||| |||||| |||        |||||  |||||||||||||||||||||||    
T  14827496 aaggtttaaatatgcctttagtccttgcactttcatcagattttggtatttgtccctacacttttttttgtttgaaattggtccctgcactttgtaaaa 14827594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 408
Target Start/End: Original strand, 34825685 - 34825779
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||| |||| || ||| |||||||||||||| |||||||||||||||||| |||        |||||| |||||||||| |||||| ||||||    
T  34825685 ttaaatatgtctttagtctctgcactttcatcatattttggcattggtccctacactttattttgtttggaattggtccctacactttataaaaa 34825779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 310 - 363
Target Start/End: Original strand, 8031070 - 8031123
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtcc 363  Q
    |||||||||| |||| || |||| |||||||||||||||||||| |||||||||    
T  8031070 aggtttaaatatgtctttagtccttgcactttcatcagattttgacattggtcc 8031123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 300 - 365
Target Start/End: Original strand, 42813865 - 42813929
Alignment:
Q  300 tattattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||||| ||||||||| |||  || |||| |||||||||||||||||||| |||||||||||    
T  42813865 tattatttta-ggtttaaatatgtttttagtccttgcactttcatcagattttgacattggtccct 42813929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 365
Target Start/End: Complemental strand, 25263744 - 25263708
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccct 365  Q
    |||| ||||||||||||||||||||||||||||||||    
T  25263744 gtccttgcactttcatcagattttggcattggtccct 25263708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 408
Target Start/End: Complemental strand, 11278310 - 11278280
Alignment:
Q  378 gtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||    
T  11278310 gtttggcattggtccctgcactttgtaaaaa 11278280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 408
Target Start/End: Original strand, 18707591 - 18707621
Alignment:
Q  378 gtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||    
T  18707591 gtttggcattggtccctgcactttgtaaaaa 18707621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 341
Target Start/End: Original strand, 25251508 - 25251538
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcacttt 341  Q
    |||||||||||||||||||||||||||||||    
T  25251508 ggtttaaatgtgtcattggtccctgcacttt 25251538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 2098639 - 2098610
Alignment:
Q  379 tttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||    
T  2098639 tttggcattggtccctgcactttgtaaaaa 2098610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 365
Target Start/End: Original strand, 7907195 - 7907248
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||||  ||||||| |||||||||| || ||||||| ||||||||||    
T  7907195 gtttaaatgtgtgtttggtccatgcactttcaccaaattttggtattggtccct 7907248  T

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Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 32927749 - 32927778
Alignment:
Q  379 tttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||    
T  32927749 tttggcattggtccctgcactttgtaaaaa 32927778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 11277993 - 11278049
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||| |||  || |||| ||||||||||||||||||| ||||| ||||||    
T  11277993 aaggtttaaatatgtttttagtccttgcactttcatcagattttagcattagtccct 11278049  T

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Target: scaffold0009 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 58833 - 58735
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  58833 aggtttaaatgtgtcattggtccatgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 58735  T

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Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 58447 - 58544
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||| || |||| ||||||||||||| |||||| ||||||||| | |||        |||||| ||||||||||||||||||||||||    
T  58447 ggtttaaatatgtctttagtccttgcactttcatcaaattttgacattggtccttacacttttttttgtttggaattggtccctgcactttgtaaaaa 58544  T

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Target: chr7 (Bit Score: 71; Significance: 5e-32; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 31849811 - 31849713
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||| ||||||||||||    
T  31849811 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgtactttgtaaaaa 31849713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 39102798 - 39102896
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||        |||||||||||||||||||||||||||||||    
T  39102798 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtctctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 39102896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 307 - 408
Target Start/End: Complemental strand, 6626584 - 6626483
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaa 406  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||| ||||||||||||||    
T  6626584 ttaaggtttaaatgtgtcattggtccctgcactttcatccgattttggcattggtccctgcacttttttttgtttggcattggtcactgcactttgtaaa 6626485  T
Q  407 aa 408  Q
    ||    
T  6626484 aa 6626483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 10336531 - 10336434
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||        |||||||||||||||||||||||||||||||    
T  10336531 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattagtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 10336434  T

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Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 315 - 408
Target Start/End: Complemental strand, 24000331 - 24000238
Alignment:
Q  315 taaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  24000331 taaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 24000238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 24164397 - 24164300
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  24164397 ggtttaaatgtgtcattggtccctacactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 24164300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 308 - 408
Target Start/End: Complemental strand, 31657804 - 31657704
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||        ||||||||||||||||||||||||||||||    
T  31657804 taaggtttaaatgtgtcattggtccctgcactttcatcaaattttagcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaa 31657705  T
Q  408 a 408  Q
    |    
T  31657704 a 31657704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 6607634 - 6607733
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||||| |||||||||||||||||||    
T  6607634 aaggtttaaatgtgtcattggtccctgcactttcatccgattttggcattggtccctgcacttttttttgtttggcattgatccctgcactttgtaaaaa 6607733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 19276638 - 19276736
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||        |||||||||||||||||||||||||||||||    
T  19276638 aggtttaaatgtgtcattggtccctgcactttcatcagattttgaaattggtccctgcactttattttgtttggcattggtccctgcactttgtaaaaa 19276736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 38816236 - 38816334
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        |||||||||| ||||||||||||||||||||    
T  38816236 aggtttaaatgtgtcattggtccctgcactttcatcagattttggaattggtccctgcacttttttttgtttggcattagtccctgcactttgtaaaaa 38816334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 312 - 408
Target Start/End: Complemental strand, 21766922 - 21766827
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||    
T  21766922 gtttaaatgtgtcattggtccctgtactttcatcagattttggcattggtccctgcac-tttttttgtttggcattggtccctgcactttgtaaaaa 21766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 313 - 408
Target Start/End: Complemental strand, 47913532 - 47913437
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||||    
T  47913532 tttaaatgtgttattggtccctgcactttcatcagattttggcattggtccctgcacttttttttgtttggcattggtctctgcactttgtaaaaa 47913437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 306 - 408
Target Start/End: Original strand, 1795435 - 1795537
Alignment:
Q  306 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaa 405  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||        ||||||||||| ||||||||||||||||    
T  1795435 tttaaggtttaaatgtgtcattggtccctgcactttcatcaaattttggaattggtccatgcacttttttttgtttggcattgatccctgcactttgtaa 1795534  T
Q  406 aaa 408  Q
    |||    
T  1795535 aaa 1795537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 310 - 407
Target Start/End: Original strand, 8952416 - 8952512
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||||||||||||||||||||    
T  8952416 aggtttaaacgtgtcattggtccctgcactttcatcagatttt-gcattggtccctgcacttttttttgtttggcattggtccctgcactttgtaaaa 8952512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 35193318 - 35193415
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||        ||||||||||||| |||||||||||||||||    
T  35193318 ggtttaaatgtgtcattgatccctgcactttcatcggattttggcattggtccctgcacttttttttgtttggcattggttcctgcactttgtaaaaa 35193415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 312 - 408
Target Start/End: Original strand, 36508065 - 36508161
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||        |||||||||||||||||||||||||||||||    
T  36508065 gtttaaatgtgtcattggtccttgtactttcatcagattttggcattggtacctgcacttttttttgtttggcattggtccctgcactttgtaaaaa 36508161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 21438656 - 21438557
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||        ||||| || ||||||||| ||||||||||||    
T  21438656 aaggtttaaatgtgtcattgatccctgcactttcatcagattttggcattggtccctgcacttttttttgtttgccactggtccctgtactttgtaaaaa 21438557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 39384710 - 39384808
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||        ||||||||||||||| |||||||||||||||    
T  39384710 aaggtttgaatgtgtcattggtccctgcactttcatcagattttggcattagtccctgcac-tttttttgtttggcattggtccttgcactttgtaaaaa 39384808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 48863562 - 48863500
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48863562 ttaaggtttaaatgtgtcattggtccttgcactttcatcagattttggcattggtccctgcac 48863500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 2765061 - 2765158
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||        ||||| |||||||||||||||||||||||||    
T  2765061 ggtttaaatgtgttattggtccctgcactttcatcagattttggtattggttcctgcacttttttttgtttgacattggtccctgcactttgtaaaaa 2765158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 369
Target Start/End: Original strand, 47403841 - 47403906
Alignment:
Q  304 attttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  47403841 attttaaggtttaaatgagtcattggtccctgcactttcatcagattttggcattgatccctgcac 47403906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 26175006 - 26174907
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||         ||||||||||| |||||||||||||||||||    
T  26175006 aggtttaaatgtgtcatttgtccctgcactttcatcagattttggcattggtccttgcactttttttttgtttggcattgatccctgcactttgtaaaaa 26174907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 369
Target Start/End: Original strand, 41320367 - 41320425
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41320367 ggtttacatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 41320425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 18733039 - 18732942
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||        ||||| |||||||||||||||||||||||||    
T  18733039 aggtttaaatgtgtcattggtccctgcattttcatcagattttgacattggtctctgcac-tttttttgtttgtcattggtccctgcactttgtaaaaa 18732942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 38567879 - 38567823
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38567879 tttaaatgtgtcactggtccctgcactttcatcagattttggcattggtccctgcac 38567823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 305 - 408
Target Start/End: Original strand, 44141403 - 44141506
Alignment:
Q  305 ttttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgta 404  Q
    |||| ||| |||||| |||| || ||||||||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||    
T  44141403 tttttaggcttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgta 44141502  T
Q  405 aaaa 408  Q
    ||||    
T  44141503 aaaa 44141506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 17356602 - 17356699
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||         ||||| |||||||||||||||||||||||||    
T  17356602 aggtttaaatgtgtcattggtccctacactttcatcaaattttgacattggtccctgca-ttttttttgtttgacattggtccctgcactttgtaaaaa 17356699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 307 - 369
Target Start/End: Original strand, 21276331 - 21276393
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  21276331 ttaaggtttaaatgtatcattggtccctgcactttcatcaaattttggcattggtctctgcac 21276393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 21766507 - 21766605
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  21766507 aggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 21766605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 6626166 - 6626263
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  6626166 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 6626263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 309 - 369
Target Start/End: Complemental strand, 5850889 - 5850829
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||    
T  5850889 aaggtttaaatgtgtcgttggtccatacactttcatcagattttggcattggtccctgcac 5850829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 304 - 408
Target Start/End: Original strand, 18732631 - 18732735
Alignment:
Q  304 attttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgt 403  Q
    ||||| |||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||  |||||||||||||||||||    
T  18732631 atttttaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgt 18732730  T
Q  404 aaaaa 408  Q
    |||||    
T  18732731 aaaaa 18732735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 38816643 - 38816545
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| || | || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  38816643 aggtttaaatatgactttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 38816545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 408
Target Start/End: Original strand, 47913121 - 47913218
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcatt--ggtccctgcactttgtaaaaa 408  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||        |||||| |||  |||||||||||||||||||||    
T  47913121 tttaaatgtgttattggtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaatttcggtccctgcactttgtaaaaa 47913218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 365
Target Start/End: Complemental strand, 11638392 - 11638340
Alignment:
Q  313 tttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  11638392 tttaaatgtgtcattggtccctgcactttcatcagattttgacattgatccct 11638340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 329 - 408
Target Start/End: Complemental strand, 41320734 - 41320655
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  41320734 gtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 41320655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 314 - 408
Target Start/End: Complemental strand, 21276674 - 21276580
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||| |||| || |||||||||||||||| |||||||||||||||||||| |||        |||||  ||||||||||||||||||||||||    
T  21276674 ttaaatatgtctttagtccctgcactttcataagattttggcattggtccctacacttttttttgtttgaaattggtccctgcactttgtaaaaa 21276580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 326 - 408
Target Start/End: Complemental strand, 39998009 - 39997927
Alignment:
Q  326 ttggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||| ||||||||||||||||||||||||||| | |||||        |||||||||||| ||||||||||||||||||    
T  39998009 ttggtcccagcactttcatcagattttggcattggttcatgcacttttttttgtttggcattggaccctgcactttgtaaaaa 39997927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 307 - 408
Target Start/End: Complemental strand, 8952828 - 8952727
Alignment:
Q  307 ttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaa 406  Q
    ||||||||||||| || | || || | |||||||||||||||||||||||||||||||| |||        |||||| |||||||||| |||||||||||    
T  8952828 ttaaggtttaaatatgcctttagtgcttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctacactttgtaaa 8952729  T
Q  407 aa 408  Q
    ||    
T  8952728 aa 8952727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 408
Target Start/End: Complemental strand, 19277061 - 19276960
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaa 406  Q
    |||||||||||| | || || |||| |||||||||||||||||||||||||||||||| |||         |||||| ||||||||||||||||||||||    
T  19277061 taaggtttaaatatatctttagtccttgcactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaa 19276962  T
Q  407 aa 408  Q
    ||    
T  19276961 aa 19276960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 47404263 - 47404166
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||  || |||| |||||||||||||||||||||||||||||||| |||         ||||| ||||||||||||||||||||||||    
T  47404263 ggtttaaatatgtttttagtccttgcactttcatcagattttggcattggtccctacacttttttttttttggaattggtccctgcactttgtaaaaa 47404166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 369
Target Start/End: Original strand, 18046047 - 18046102
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||| ||| ||| |||||||||||||||||| ||||||||||||||||||||||    
T  18046047 ttaaatatgtgattagtccctgcactttcatcaaattttggcattggtccctgcac 18046102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 408
Target Start/End: Original strand, 26174633 - 26174712
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||| |||||||||||||||||||||||||||||||| ||         |||||| ||||||||||||||||||||||||    
T  26174633 gtccttgcactttcatcagattttggcattggtccctacatttttttttgtttggaattggtccctgcactttgtaaaaa 26174712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 365
Target Start/End: Complemental strand, 6607934 - 6607880
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||| |||| || |||| ||||||||||||||||||||||||||||||||    
T  6607934 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccct 6607880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 31849455 - 31849491
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||||||||||||||||||||||||||||||||    
T  31849455 gtccctgcactttcatcagattttggcattggtccct 31849491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 368
Target Start/End: Complemental strand, 38567837 - 38567793
Alignment:
Q  324 cattggtccctgcactttcatcagattttggcattggtccctgca 368  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||    
T  38567837 cattggtccctgcacttttatcagattttgacattggtccctgca 38567793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 365
Target Start/End: Original strand, 21438261 - 21438296
Alignment:
Q  330 tccctgcactttcatcagattttggcattggtccct 365  Q
    ||||||||||||||||||||||||||||||||||||    
T  21438261 tccctgcactttcatcagattttggcattggtccct 21438296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 367
Target Start/End: Original strand, 19587672 - 19587723
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgc 367  Q
    ||||||||||  ||||||||||||||||||||  ||||||||||||||||||||    
T  19587672 ttaaatgtgt--ttggtccctgcactttcatctaattttggcattggtccctgc 19587723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 365
Target Start/End: Original strand, 24164017 - 24164067
Alignment:
Q  315 taaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    ||||| |||| || |||| ||||||||||||||||||||||||||||||||    
T  24164017 taaatatgtctttagtccttgcactttcatcagattttggcattggtccct 24164067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 335 - 408
Target Start/End: Complemental strand, 39103091 - 39103017
Alignment:
Q  335 gcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||| |||         |||||| ||||||||||||||||||||||||    
T  39103091 gcactttcatcagattttggcattggtccctacactttttttttgtttggaattggtccctgcactttgtaaaaa 39103017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 35193732 - 35193635
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| || | || |||| |||||||||||||||||||| ||||||||||| |||        |||||| |||||||| || ||||||||||||    
T  35193732 ggtttaaatatgcctttagtccttgcactttcatcagattttgacattggtccctacacttttttttgtttggaattggtccttgtactttgtaaaaa 35193635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 368
Target Start/End: Original strand, 47403892 - 47403936
Alignment:
Q  324 cattggtccctgcactttcatcagattttggcattggtccctgca 368  Q
    ||||| |||||||||||||||| |||||||| |||||||||||||    
T  47403892 cattgatccctgcactttcatcggattttggtattggtccctgca 47403936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 365
Target Start/End: Original strand, 48863302 - 48863338
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||||||||| ||||||||||||||||||||||    
T  48863302 gtccctgcactttcctcagattttggcattggtccct 48863338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 314 - 365
Target Start/End: Complemental strand, 17357015 - 17356964
Alignment:
Q  314 ttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||| |||| || || |||||||||||||||||||||||||||| |||||    
T  17357015 ttaaatatgtctttagttcctgcactttcatcagattttggcattgatccct 17356964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 322 - 369
Target Start/End: Original strand, 31915428 - 31915475
Alignment:
Q  322 gtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||| ||||||||||||||| || |||||| |||||||||||||||    
T  31915428 gtcatttgtccctgcactttcaacatattttgacattggtccctgcac 31915475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 23999921 - 23999971
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggt 361  Q
    ||||||||| |||| || |||| |||||||||||||||||||| |||||||    
T  23999921 ggtttaaatatgtctttagtccttgcactttcatcagattttgacattggt 23999971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 363
Target Start/End: Complemental strand, 2765353 - 2765300
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtcc 363  Q
    |||||||||| |||| || |||| ||||||||||||| |||||| |||||||||    
T  2765353 aggtttaaatatgtctttagtccttgcactttcatcaaattttgacattggtcc 2765300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 5850848 - 5850819
Alignment:
Q  379 tttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||    
T  5850848 tttggcattggtccctgcactttgtaaaaa 5850819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 41320406 - 41320435
Alignment:
Q  379 tttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||    
T  41320406 tttggcattggtccctgcactttgtaaaaa 41320435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 47444116 - 47444059
Alignment:
Q  306 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtcc 363  Q
    ||||||| |||||||||  ||| ||||||||||||||| |  ||||||||||||||||    
T  47444116 tttaaggcttaaatgtgggattagtccctgcactttcacccaattttggcattggtcc 47444059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 408
Target Start/End: Complemental strand, 35193582 - 35193554
Alignment:
Q  380 ttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||||||||||||||    
T  35193582 ttggcattggtccctgcactttgtaaaaa 35193554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 309 - 408
Target Start/End: Complemental strand, 35754 - 35655
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||        ||||| |||||||||||||||||||||||||    
T  35754 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattgatccctgcacttttttttgtttgacattggtccctgcactttgtaaaaa 35655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 408
Target Start/End: Original strand, 35333 - 35432
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac-nnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||| ||  ||| ||||||||||||||||||||||||||||| || |||         |||||| ||||||||||||||||||||||||    
T  35333 aggtttaaatatgtctttaatccttgcactttcatcagattttggcattggtcactacactttttttttgtttggaattggtccctgcactttgtaaaaa 35432  T

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Target: scaffold0079 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 310 - 408
Target Start/End: Complemental strand, 57805 - 57707
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||| |||||||||||||||||||    
T  57805 aggtttaaatctgtcattggtccctgcactttcatcagattttggcattggtccctgcactttttttcgtttggcattgatccctgcactttgtaaaaa 57707  T

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Target: scaffold0036 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 306 - 408
Target Start/End: Complemental strand, 17254 - 17152
Alignment:
Q  306 tttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaa 405  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||        ||||| ||||||||||||||||||||||    
T  17254 tttaaggtttaaatgtgttattggtccctgcactttcattagattttggcattggtccctgcacttttttttgtttgacattggtccctgcactttgtaa 17155  T
Q  406 aaa 408  Q
    |||    
T  17154 aaa 17152  T

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Target: scaffold0015 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 302 - 408
Target Start/End: Original strand, 49708 - 49813
Alignment:
Q  302 ttattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcacttt 401  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||          |||||||||||||||||||||||    
T  49708 ttatttaaaggtttaaatgtgtcattggtccctgcactttcatcagattttggtattggtccctgca-ttttttttttttggcattggtccctgcacttt 49806  T
Q  402 gtaaaaa 408  Q
    |||||||    
T  49807 gtaaaaa 49813  T

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Target: scaffold0015; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 408
Target Start/End: Complemental strand, 50132 - 50032
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    ||||| |||||| |||| || ||||||||||||||||||||||||||||||||||||| |||        |||||| |||||||| | ||||||||||||    
T  50132 taaggcttaaatatgtctttagtccctgcactttcatcagattttggcattggtccctacactttattttgtttggaattggtccatacactttgtaaaa 50033  T
Q  408 a 408  Q
    |    
T  50032 a 50032  T

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Target: scaffold0170 (Bit Score: 61; Significance: 5e-26; HSPs: 3)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 369
Target Start/End: Complemental strand, 5870 - 5810
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5870 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 5810  T

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Target: scaffold0170; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 312 - 408
Target Start/End: Original strand, 5510 - 5606
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  5510 gtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaaa 5606  T

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Target: scaffold0170; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 5829 - 5800
Alignment:
Q  379 tttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||    
T  5829 tttggcattggtccctgcactttgtaaaaa 5800  T

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Target: scaffold0651 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 6028 - 6126
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  6028 aaggtttaaatgtgtcattggtctctgcactttcatcagattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgtaaaaa 6126  T

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Target: scaffold0651; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 6440 - 6344
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| ||||||||||||||||||||||||    
T  6440 ggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacac-tttttttgtttggaattggtccctgcactttgtaaaaa 6344  T

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Target: scaffold0044 (Bit Score: 59; Significance: 7e-25; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 299 - 369
Target Start/End: Original strand, 9574 - 9644
Alignment:
Q  299 atattattttaaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9574 atattattattaggtataaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 9644  T

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Target: scaffold0044; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 308 - 408
Target Start/End: Complemental strand, 9952 - 9852
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    |||||||||||| || | ||  ||| |||||||| ||||||||||||||||||||||| |||        |||||| |||||||||||||||||||||||    
T  9952 taaggtttaaatatgcctttaatccttgcacttttatcagattttggcattggtccctacaccattttttgtttggaattggtccctgcactttgtaaaa 9853  T
Q  408 a 408  Q
    |    
T  9852 a 9852  T

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Target: scaffold0044; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 408
Target Start/End: Original strand, 9625 - 9654
Alignment:
Q  379 tttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||||||||||||||    
T  9625 tttggcattggtccctgcactttgtaaaaa 9654  T

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Target: scaffold0185 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 309 - 408
Target Start/End: Original strand, 8061 - 8160
Alignment:
Q  309 aaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||        ||||||||||||||| |||||||||||||||    
T  8061 aaggtttaaatatgtcactggtccctgcactttcatcagattttgacattggtccttgcacttttttttgtttggcattggtccttgcactttgtaaaaa 8160  T

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Target: scaffold0275 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 308 - 408
Target Start/End: Original strand, 1263 - 1363
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaa 407  Q
    |||||||||||| |||| || |||| |||||||||||||||||||||||||||||||| |||        |||||| |||||||||||||||||||||||    
T  1263 taaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccctacacttttttttgtttggaattggtccctgcactttgtaaaa 1362  T
Q  408 a 408  Q
    |    
T  1363 a 1363  T

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Target: scaffold0275; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 369
Target Start/End: Complemental strand, 1621 - 1562
Alignment:
Q  310 aggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcac 369  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||    
T  1621 aggtttaaatgtgtaattggtccttgcactttcatcagattttggcattgatccctgcac 1562  T

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Target: scaffold0421 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 312 - 408
Target Start/End: Original strand, 2951 - 3046
Alignment:
Q  312 gtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||         ||||||||||||||| |||||||||||||||    
T  2951 gtttaaatgtgtcattggttcctgcactttcatcagattttgatattgatccctgca-ttttttttgtttggcattggtccttgcactttgtaaaaa 3046  T

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Target: scaffold1095 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 365
Target Start/End: Complemental strand, 83 - 26
Alignment:
Q  308 taaggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccct 365  Q
    |||||||||||| |||| || |||| ||||||||||||||||||||||||||||||||    
T  83 taaggtttaaatatgtctttagtccttgcactttcatcagattttggcattggtccct 26  T

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Target: scaffold0825 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 1174 - 1271
Alignment:
Q  311 ggtttaaatgtgtcattggtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    ||||||||| || | || |||| |||||||||||||||||||||||||| ||||| |||        |||||  ||||||||||||||||||||||||    
T  1174 ggtttaaatatgcctttagtccttgcactttcatcagattttggcattgatccctacacttttttttgtttgaaattggtccctgcactttgtaaaaa 1271  T

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Target: scaffold0385 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 329 - 408
Target Start/End: Original strand, 12986 - 13064
Alignment:
Q  329 gtccctgcactttcatcagattttggcattggtccctgcacnnnnnnnngtttggcattggtccctgcactttgtaaaaa 408  Q
    |||||||||||||||||| |||||||||||||||||| |||        |||||| ||||||||||||| ||||||||||    
T  12986 gtccctgcactttcatcaaattttggcattggtccctacac-tttttttgtttggaattggtccctgcagtttgtaaaaa 13064  T

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