View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17911_high_11 (Length: 326)
Name: NF17911_high_11
Description: NF17911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17911_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 13 - 310
Target Start/End: Original strand, 36929465 - 36929762
Alignment:
| Q |
13 |
aatattagagtcaattggaagcaaatgaggcttcacagaacaacgtttacaaacctcattgaagttgttgaatggaaataattttacctgcaaatgactt |
112 |
Q |
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| T |
36929465 |
aatattagagtcaattggtagcaaatgaggcttcacagaacaacgtttacaaacctcattgaaattgttgaatggaaataattttacctgcaaatgactt |
36929564 |
T |
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| Q |
113 |
ttaacatgggaaatggatagcaaatttgatttcatcatatctagtatagccttaggctttgcctctgcaattataatcaatgaattaattgaatttgctt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
36929565 |
ttaacatgggaaatggatagcaaatttgatttcatcatatctagtatagccttaggctttgcctctgcaattataatcaatgaattaattgaattttctt |
36929664 |
T |
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| Q |
213 |
atgagtaactaatgctattacttagtagttaattacttactttctggaccaccaaggtgatcaacgatgatcatgaatgattcatgcagatcctctgt |
310 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36929665 |
atgtgtaactaatgctattacttagtagttaattacttactttctggaccaccaaggtgatcaacgatgatcatgaatgattcatgcagatcctctgt |
36929762 |
T |
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