View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17917_low_25 (Length: 234)

Name: NF17917_low_25
Description: NF17917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17917_low_25
NF17917_low_25
[»] chr3 (44 HSPs)
chr3 (70-233)||(31111056-31111226)
chr3 (3-54)||(10293909-10293960)
chr3 (3-54)||(20969019-20969070)
chr3 (4-54)||(8314016-8314066)
chr3 (4-53)||(4947263-4947312)
chr3 (1-54)||(53687891-53687944)
chr3 (3-54)||(10293611-10293662)
chr3 (3-54)||(20968721-20968772)
chr3 (4-54)||(45060872-45060922)
chr3 (1-54)||(3353131-3353183)
chr3 (1-54)||(42673294-42673346)
chr3 (1-54)||(48159900-48159953)
chr3 (1-57)||(1928432-1928487)
chr3 (1-57)||(14015962-14016017)
chr3 (1-57)||(27238898-27238954)
chr3 (1-57)||(53766163-53766219)
chr3 (3-54)||(47871122-47871172)
chr3 (3-56)||(1101090-1101143)
chr3 (4-54)||(1927775-1927825)
chr3 (4-54)||(8315083-8315132)
chr3 (3-56)||(13657621-13657675)
chr3 (4-54)||(22429161-22429211)
chr3 (8-54)||(42455793-42455839)
chr3 (1-54)||(3644781-3644834)
chr3 (1-38)||(21896509-21896546)
chr3 (1-54)||(26007185-26007237)
chr3 (1-54)||(40848959-40849012)
chr3 (1-54)||(42672981-42673033)
chr3 (1-54)||(47666333-47666386)
chr3 (1-54)||(48160331-48160384)
chr3 (5-57)||(14015694-14015746)
chr3 (4-52)||(18874887-18874935)
chr3 (3-55)||(26540693-26540744)
chr3 (3-54)||(18875191-18875242)
chr3 (3-57)||(9026736-9026789)
chr3 (3-57)||(23630035-23630089)
chr3 (1-54)||(22429594-22429646)
chr3 (1-54)||(24485458-24485510)
chr3 (1-54)||(36180988-36181041)
chr3 (1-54)||(40848524-40848576)
chr3 (5-54)||(47665914-47665963)
chr3 (5-57)||(3353553-3353604)
chr3 (6-56)||(14015873-14015925)
chr3 (6-54)||(17441066-17441114)
[»] chr8 (52 HSPs)
chr8 (1-54)||(22851393-22851446)
chr8 (1-57)||(13027279-13027335)
chr8 (1-54)||(9822751-9822804)
chr8 (1-54)||(9823359-9823412)
chr8 (1-54)||(39724046-39724099)
chr8 (3-54)||(15156185-15156236)
chr8 (1-54)||(3307341-3307394)
chr8 (5-54)||(13026638-13026687)
chr8 (3-54)||(765737-765788)
chr8 (3-54)||(15155886-15155937)
chr8 (3-54)||(37752416-37752467)
chr8 (3-54)||(41662403-41662454)
chr8 (5-54)||(12281127-12281176)
chr8 (1-54)||(13937387-13937440)
chr8 (1-54)||(23123341-23123394)
chr8 (1-57)||(34498122-34498178)
chr8 (3-54)||(12281426-12281477)
chr8 (3-54)||(16929242-16929293)
chr8 (3-53)||(43162539-43162588)
chr8 (1-54)||(13936726-13936778)
chr8 (1-54)||(24473766-24473819)
chr8 (1-54)||(25438795-25438848)
chr8 (1-54)||(37752087-37752140)
chr8 (1-57)||(25439124-25439179)
chr8 (3-54)||(34313768-34313817)
chr8 (6-56)||(74864-74915)
chr8 (3-54)||(16928945-16928996)
chr8 (3-54)||(43245874-43245925)
chr8 (3-54)||(43246176-43246227)
chr8 (1-38)||(6092794-6092831)
chr8 (4-57)||(15042145-15042198)
chr8 (5-54)||(22851958-22852007)
chr8 (1-54)||(34498553-34498606)
chr8 (1-54)||(37396711-37396764)
chr8 (1-54)||(37397143-37397196)
chr8 (5-54)||(43162237-43162285)
chr8 (1-57)||(15444645-15444701)
chr8 (3-54)||(18020088-18020137)
chr8 (1-44)||(39723415-39723458)
chr8 (3-54)||(41662110-41662161)
chr8 (4-54)||(3463946-3463996)
chr8 (3-37)||(9465874-9465908)
chr8 (1-54)||(6199094-6199147)
chr8 (1-54)||(15442766-15442819)
chr8 (5-54)||(17431290-17431339)
chr8 (4-56)||(22786934-22786987)
chr8 (1-54)||(24473346-24473399)
chr8 (5-54)||(41662524-41662573)
chr8 (2-38)||(3463659-3463695)
chr8 (10-54)||(9465610-9465653)
chr8 (5-57)||(22786840-22786892)
chr8 (8-56)||(37669956-37670004)
[»] chr4 (53 HSPs)
chr4 (1-57)||(36096473-36096529)
chr4 (1-54)||(50678782-50678835)
chr4 (1-54)||(24775781-24775834)
chr4 (1-54)||(36095820-36095873)
chr4 (1-54)||(45830194-45830247)
chr4 (1-54)||(50679422-50679475)
chr4 (1-54)||(56505696-56505749)
chr4 (1-57)||(43050607-43050663)
chr4 (3-54)||(13198906-13198957)
chr4 (4-54)||(23540253-23540303)
chr4 (3-53)||(49178816-49178866)
chr4 (1-54)||(9023678-9023731)
chr4 (1-54)||(39744463-39744516)
chr4 (1-54)||(43051250-43051303)
chr4 (3-54)||(16555518-16555569)
chr4 (3-54)||(18077202-18077253)
chr4 (3-54)||(22681578-22681628)
chr4 (1-54)||(169437-169490)
chr4 (1-54)||(293215-293268)
chr4 (1-54)||(9023247-9023300)
chr4 (3-56)||(13198604-13198657)
chr4 (1-54)||(16555815-16555868)
chr4 (1-54)||(25161881-25161934)
chr4 (1-54)||(28196349-28196402)
chr4 (1-54)||(28196771-28196824)
chr4 (1-54)||(32703648-32703701)
chr4 (1-54)||(43292040-43292093)
chr4 (5-57)||(47219203-47219255)
chr4 (3-54)||(3930480-3930530)
chr4 (1-54)||(4239364-4239417)
chr4 (1-54)||(5205991-5206044)
chr4 (1-54)||(9380310-9380363)
chr4 (1-54)||(9380739-9380792)
chr4 (1-54)||(11241659-11241711)
chr4 (1-54)||(11529171-11529224)
chr4 (5-54)||(22681881-22681930)
chr4 (1-54)||(26207744-26207797)
chr4 (9-54)||(56506580-56506625)
chr4 (3-54)||(8181994-8182046)
chr4 (3-54)||(8182172-8182224)
chr4 (7-54)||(11241392-11241439)
chr4 (3-54)||(32703228-32703279)
chr4 (3-54)||(35393776-35393826)
chr4 (1-54)||(169016-169070)
chr4 (4-54)||(5206231-5206280)
chr4 (4-54)||(25225399-25225449)
chr4 (4-54)||(45828997-45829047)
chr4 (3-52)||(49178644-49178694)
chr4 (4-56)||(24775642-24775695)
chr4 (1-54)||(26207364-26207416)
chr4 (5-54)||(39086625-39086674)
chr4 (3-54)||(7603148-7603197)
chr4 (6-54)||(7603422-7603469)
[»] chr7 (47 HSPs)
chr7 (1-54)||(44599492-44599545)
chr7 (1-54)||(44600133-44600186)
chr7 (1-54)||(13863316-13863369)
chr7 (1-57)||(18863967-18864023)
chr7 (3-54)||(3687656-3687707)
chr7 (3-54)||(9412325-9412376)
chr7 (1-54)||(8643764-8643817)
chr7 (1-54)||(13863955-13864007)
chr7 (1-54)||(17156970-17157023)
chr7 (1-54)||(20419322-20419375)
chr7 (1-54)||(22740159-22740212)
chr7 (1-57)||(20418888-20418944)
chr7 (3-54)||(3205093-3205144)
chr7 (3-54)||(9412026-9412077)
chr7 (1-56)||(22740589-22740643)
chr7 (7-57)||(27096346-27096395)
chr7 (7-57)||(27181908-27181957)
chr7 (1-54)||(9035291-9035344)
chr7 (1-54)||(10533037-10533090)
chr7 (1-54)||(13744231-13744283)
chr7 (1-54)||(37888836-37888889)
chr7 (1-54)||(37889257-37889310)
chr7 (1-54)||(37972394-37972447)
chr7 (1-54)||(48359323-48359375)
chr7 (3-54)||(3687356-3687408)
chr7 (1-57)||(36527384-36527439)
chr7 (1-54)||(5349731-5349781)
chr7 (3-54)||(8953889-8953939)
chr7 (3-54)||(13772901-13772952)
chr7 (4-54)||(6908216-6908265)
chr7 (4-54)||(38191566-38191616)
chr7 (1-54)||(13772644-13772697)
chr7 (1-54)||(29292925-29292978)
chr7 (1-54)||(30857902-30857955)
chr7 (1-54)||(37971963-37972016)
chr7 (5-54)||(38826915-38826964)
chr7 (6-54)||(5735255-5735303)
chr7 (3-54)||(9034870-9034921)
chr7 (9-55)||(5735553-5735599)
chr7 (3-57)||(42419029-42419082)
chr7 (1-54)||(13741560-13741613)
chr7 (5-54)||(18925065-18925114)
chr7 (9-54)||(23686723-23686768)
chr7 (1-54)||(29293344-29293397)
chr7 (1-34)||(35080221-35080254)
chr7 (1-54)||(46816309-46816362)
chr7 (4-56)||(6908485-6908536)
[»] chr6 (24 HSPs)
chr6 (1-54)||(33828993-33829046)
chr6 (1-54)||(33829634-33829687)
chr6 (3-54)||(18241857-18241908)
chr6 (1-54)||(3403720-3403773)
chr6 (1-54)||(7654546-7654599)
chr6 (1-57)||(31598726-31598781)
chr6 (3-54)||(3403989-3404040)
chr6 (8-54)||(21032285-21032331)
chr6 (3-54)||(10039679-10039729)
chr6 (3-54)||(11656782-11656833)
chr6 (7-57)||(12714431-12714481)
chr6 (3-56)||(21032101-21032155)
chr6 (3-57)||(30388362-30388416)
chr6 (1-54)||(10087856-10087909)
chr6 (1-54)||(33974297-33974350)
chr6 (1-57)||(32733994-32734050)
chr6 (3-54)||(3825530-3825580)
chr6 (3-54)||(18242156-18242207)
chr6 (3-54)||(21031982-21032032)
chr6 (3-54)||(23250595-23250645)
chr6 (1-54)||(2354808-2354861)
chr6 (5-56)||(23250772-23250823)
chr6 (10-53)||(31598157-31598201)
chr6 (10-53)||(31598641-31598685)
[»] chr5 (44 HSPs)
chr5 (1-54)||(18817609-18817662)
chr5 (1-57)||(11351425-11351481)
chr5 (1-54)||(18816955-18817008)
chr5 (5-57)||(31569907-31569958)
chr5 (3-54)||(18433316-18433367)
chr5 (3-54)||(25116061-25116112)
chr5 (3-54)||(25175151-25175202)
chr5 (1-54)||(18433018-18433071)
chr5 (1-54)||(19514961-19515014)
chr5 (1-57)||(21207226-21207282)
chr5 (3-54)||(25115760-25115811)
chr5 (3-54)||(25174852-25174903)
chr5 (3-54)||(33324838-33324889)
chr5 (1-54)||(11350811-11350863)
chr5 (1-54)||(12498570-12498623)
chr5 (1-54)||(12498926-12498979)
chr5 (1-54)||(26020453-26020506)
chr5 (1-54)||(26570732-26570785)
chr5 (1-54)||(26571162-26571215)
chr5 (4-57)||(41382893-41382945)
chr5 (1-57)||(10098939-10098994)
chr5 (5-51)||(16726084-16726130)
chr5 (1-54)||(22428937-22428989)
chr5 (1-54)||(22429194-22429246)
chr5 (1-54)||(22729438-22729490)
chr5 (5-54)||(34147512-34147561)
chr5 (5-54)||(43464194-43464242)
chr5 (1-57)||(2817149-2817205)
chr5 (1-56)||(9665558-9665611)
chr5 (9-56)||(12441196-12441244)
chr5 (4-56)||(23011383-23011434)
chr5 (1-57)||(34576867-34576922)
chr5 (1-57)||(43463756-43463811)
chr5 (3-54)||(5187830-5187881)
chr5 (7-54)||(16466746-16466793)
chr5 (4-54)||(25940524-25940574)
chr5 (1-54)||(3888242-3888295)
chr5 (1-57)||(22629522-22629579)
chr5 (1-54)||(34577162-34577214)
chr5 (1-54)||(37610205-37610257)
chr5 (1-54)||(37780323-37780375)
chr5 (1-57)||(3888660-3888716)
chr5 (1-57)||(11316972-11317028)
chr5 (6-54)||(22729011-22729058)
[»] chr2 (48 HSPs)
chr2 (1-54)||(2639480-2639533)
chr2 (1-54)||(18296691-18296744)
chr2 (1-54)||(26841590-26841643)
chr2 (1-55)||(7591203-7591257)
chr2 (1-54)||(2638823-2638876)
chr2 (1-54)||(18296079-18296132)
chr2 (1-54)||(26842236-26842289)
chr2 (3-54)||(20347464-20347515)
chr2 (3-54)||(30190926-30190977)
chr2 (1-54)||(7591848-7591901)
chr2 (1-54)||(8851580-8851633)
chr2 (1-54)||(24832334-24832387)
chr2 (1-57)||(8851148-8851204)
chr2 (1-57)||(18055314-18055370)
chr2 (3-54)||(6171456-6171507)
chr2 (3-54)||(11883626-11883677)
chr2 (3-54)||(11883926-11883977)
chr2 (3-54)||(26737781-26737832)
chr2 (3-54)||(30191225-30191276)
chr2 (3-57)||(32673143-32673196)
chr2 (3-57)||(40469729-40469783)
chr2 (3-56)||(43495484-43495537)
chr2 (5-54)||(6171159-6171207)
chr2 (5-54)||(6495723-6495772)
chr2 (1-54)||(7664251-7664304)
chr2 (1-54)||(7664671-7664724)
chr2 (3-56)||(15920779-15920832)
chr2 (1-54)||(17850981-17851034)
chr2 (1-54)||(37720207-37720260)
chr2 (1-54)||(41790910-41790963)
chr2 (1-57)||(26692396-26692452)
chr2 (1-57)||(26692818-26692874)
chr2 (1-57)||(41790491-41790546)
chr2 (3-54)||(5378664-5378715)
chr2 (3-54)||(20347166-20347217)
chr2 (5-55)||(29343583-29343633)
chr2 (1-54)||(18750124-18750176)
chr2 (5-54)||(29230285-29230334)
chr2 (4-56)||(15321513-15321565)
chr2 (3-54)||(5379959-5380010)
chr2 (4-54)||(6495470-6495519)
chr2 (4-54)||(32672845-32672895)
chr2 (1-50)||(6324924-6324973)
chr2 (5-54)||(6325349-6325398)
chr2 (1-54)||(16910830-16910883)
chr2 (1-54)||(16911267-16911319)
chr2 (7-54)||(15321395-15321440)
chr2 (3-54)||(26737485-26737534)
[»] chr1 (56 HSPs)
chr1 (1-54)||(6002240-6002293)
chr1 (1-54)||(48190774-48190827)
chr1 (1-54)||(49284412-49284465)
chr1 (1-54)||(8108991-8109044)
chr1 (1-54)||(39691998-39692051)
chr1 (1-54)||(48191353-48191406)
chr1 (1-57)||(28634155-28634211)
chr1 (3-54)||(47955309-47955360)
chr1 (3-57)||(8108721-8108775)
chr1 (3-56)||(1176837-1176890)
chr1 (1-54)||(6002892-6002945)
chr1 (5-57)||(22149701-22149753)
chr1 (5-57)||(42611616-42611668)
chr1 (1-57)||(48104678-48104734)
chr1 (1-57)||(50430079-50430135)
chr1 (3-54)||(17518602-17518652)
chr1 (3-54)||(31848192-31848243)
chr1 (3-54)||(47955608-47955659)
chr1 (1-54)||(9347129-9347182)
chr1 (1-54)||(20480171-20480223)
chr1 (1-54)||(26814697-26814750)
chr1 (1-54)||(26815117-26815170)
chr1 (1-54)||(32163041-32163094)
chr1 (1-54)||(44911028-44911081)
chr1 (1-54)||(50615619-50615671)
chr1 (1-54)||(50623447-50623499)
chr1 (1-57)||(999112-999167)
chr1 (1-57)||(46823843-46823899)
chr1 (3-54)||(13589659-13589709)
chr1 (3-54)||(41083211-41083261)
chr1 (8-54)||(50615243-50615289)
chr1 (8-54)||(50623071-50623117)
chr1 (1-54)||(6703892-6703945)
chr1 (1-54)||(19008748-19008801)
chr1 (1-54)||(21687028-21687081)
chr1 (1-54)||(27172119-27172171)
chr1 (1-54)||(47498493-47498545)
chr1 (1-54)||(48105114-48105167)
chr1 (1-54)||(50526470-50526523)
chr1 (5-57)||(42611185-42611237)
chr1 (3-54)||(17518306-17518356)
chr1 (3-54)||(20371353-20371403)
chr1 (3-54)||(22149406-22149455)
chr1 (7-54)||(41082912-41082959)
chr1 (3-57)||(1177018-1177072)
chr1 (4-54)||(20480613-20480662)
chr1 (7-53)||(50949569-50949615)
chr1 (1-54)||(4692431-4692484)
chr1 (1-54)||(13918449-13918502)
chr1 (5-54)||(13918869-13918918)
chr1 (1-54)||(27172539-27172592)
chr1 (1-54)||(28633723-28633776)
chr1 (1-54)||(33085674-33085727)
chr1 (4-57)||(44911438-44911491)
chr1 (1-34)||(49285053-49285086)
chr1 (1-57)||(31847895-31847951)
[»] scaffold0328 (2 HSPs)
scaffold0328 (1-54)||(6793-6846)
scaffold0328 (1-54)||(6155-6208)
[»] scaffold0001 (2 HSPs)
scaffold0001 (4-57)||(183364-183416)
scaffold0001 (3-54)||(438933-438984)
[»] scaffold0802 (2 HSPs)
scaffold0802 (3-54)||(1121-1172)
scaffold0802 (3-54)||(1420-1471)
[»] scaffold0319 (2 HSPs)
scaffold0319 (3-54)||(6397-6448)
scaffold0319 (3-54)||(6697-6747)
[»] scaffold0192 (1 HSPs)
scaffold0192 (3-54)||(25369-25420)
[»] scaffold0110 (2 HSPs)
scaffold0110 (3-54)||(45807-45857)
scaffold0110 (6-54)||(45540-45587)
[»] scaffold0002 (1 HSPs)
scaffold0002 (3-54)||(411926-411976)
[»] scaffold0460 (2 HSPs)
scaffold0460 (1-54)||(333-386)
scaffold0460 (1-54)||(761-813)
[»] scaffold1221 (2 HSPs)
scaffold1221 (5-57)||(1786-1837)
scaffold1221 (1-54)||(1514-1566)
[»] scaffold0035 (1 HSPs)
scaffold0035 (3-56)||(73087-73141)
[»] scaffold0598 (1 HSPs)
scaffold0598 (5-54)||(6610-6659)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-54)||(20041-20094)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-54)||(38693-38746)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-54)||(185272-185325)
scaffold0017 (1-54)||(184842-184895)
[»] scaffold0535 (1 HSPs)
scaffold0535 (7-54)||(10015-10062)
[»] scaffold0069 (1 HSPs)
scaffold0069 (3-54)||(50507-50557)
[»] scaffold0376 (1 HSPs)
scaffold0376 (1-54)||(7458-7510)
[»] scaffold0015 (1 HSPs)
scaffold0015 (5-54)||(17158-17206)


Alignment Details
Target: chr3 (Bit Score: 109; Significance: 6e-55; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 70 - 233
Target Start/End: Original strand, 31111056 - 31111226
Alignment:
Q  70 gaagtcaatgtaataatagtacttgatttcgttaaagaaaattaatacttcattaacgcatttatggtgactagtgaatcatttca-------aggcaca 162  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||       |||||||    
T  31111056 gaagtcaatgtaatagtagtacttgacttcgttaaagaaaattaatacttaattaacgcatttatggtggctagtggatcatttcaattttccaggcaca 31111155  T
Q  163 agctcttgagtaaaacttgggactcagattaaagaaagttgttcaataaacaccttaatttcatttgatca 233  Q
    |||||||| ||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||    
T  31111156 agctcttgtgtaaaacttgggactcaaattaaagaaagttgtttaataagcaccttaatttcatttgatca 31111226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 10293909 - 10293960
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  10293909 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 10293960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 20969019 - 20969070
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  20969019 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 20969070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 8314066 - 8314016
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  8314066 gggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaa 8314016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 4947312 - 4947263
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaatta 53  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  4947312 gggtgcaaaatcgcacaattaacaaaaaataggggtgaaaagtgcaatta 4947263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 53687944 - 53687891
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  53687944 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 53687891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 10293662 - 10293611
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||||||||||||||||  |||| |||||||||    
T  10293662 ggggtgcaaaatcgcacaattgacaaaagataggggaaaaaaatgcaattaa 10293611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 20968772 - 20968721
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  20968772 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaggtgcaattaa 20968721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 45060872 - 45060922
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||| ||||||||||||||  |||||||||||||||||||||||||||||    
T  45060872 gggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaa 45060922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3353183 - 3353131
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  3353183 atggggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaattaa 3353131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42673294 - 42673346
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  42673294 atggggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaattaa 42673346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48159953 - 48159900
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  48159953 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 48159900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1928432 - 1928487
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||| ||||||||||||  ||||| ||||||||||||    
T  1928432 atggggtgcaaaatcgcacaattggcaaaagatagggaggaaaa-tgcaattaaacc 1928487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14015962 - 14016017
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||  ||||||||| || |||||||||||||||||||    
T  14015962 atggggtgcaaaatcgcacaattagcaaaagata-ggatgaaaagtgcaattaaacc 14016017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 27238898 - 27238954
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||| ||||  |||| || ||||||||||||||||||    
T  27238898 atggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaaacc 27238954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 53766219 - 53766163
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||||||||  ||||| |  |||||||||||||||||    
T  53766219 atggggtgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaaacc 53766163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 47871122 - 47871172
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  47871122 ggggtgcaaaatcgcacaattagcaaaagatagggg-gaaaagtgcaattaa 47871172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 1101090 - 1101143
Alignment:
Q  3 ggggtgcaaaatcgcacaattgac-aaaagataggggtgaaaagtgcaattaaac 56  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  1101090 ggggtgcaaaatcgcacaattgacaaaaagatagggg-caaaagtgcaattaaac 1101143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 1927825 - 1927775
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||| ||||| ||||||||||||| |||| ||||||||||    
T  1927825 gggtgcaaaatcgcataattggcaaaagataggggggaaaggtgcaattaa 1927775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 8315083 - 8315132
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  8315083 gggtgcaaaatcgcacaattgacaaaatatagggg-ggaaagtgcaattaa 8315132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 13657621 - 13657675
Alignment:
Q  3 ggggtgcaaaatcgcacaattgac-aaaagataggggtgaaaagtgcaattaaac 56  Q
    |||||||||||||||||||||| | ||||||||||||  ||||||||||||||||    
T  13657621 ggggtgcaaaatcgcacaattggcaaaaagataggggacaaaagtgcaattaaac 13657675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 22429211 - 22429161
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||| ||||||||||| ||||| ||||||| |||||||||||||||    
T  22429211 gggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaattaa 22429161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 42455839 - 42455793
Alignment:
Q  8 gcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||||    
T  42455839 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 42455793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3644781 - 3644834
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||| |||||| ||| ||| ||||| |||||||||    
T  3644781 atggggtgcaaaatcgcacaattaacaaaaaataagggggaaaaatgcaattaa 3644834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 21896509 - 21896546
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatagggg 38  Q
    |||||||||||||||||||||||||||||| |||||||    
T  21896509 atggggtgcaaaatcgcacaattgacaaaatatagggg 21896546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26007237 - 26007185
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| ||||| |||||||||    
T  26007237 atggggtgcaaaatcgcacaattgacaaactataggggggaaaa-tgcaattaa 26007185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 40848959 - 40849012
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  |||| || |||||||||||||||    
T  40848959 atggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 40849012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42673033 - 42672981
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  42673033 atggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaa 42672981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47666333 - 47666386
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||| ||||||||| ||||  ||||||| |||||||||||||||    
T  47666333 atggggtgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaa 47666386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 48160331 - 48160384
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| | |||||||||||||    
T  48160331 atggggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaa 48160384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 14015746 - 14015694
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||||||||||||| ||||||||||||||  ||  |||||||||||||||||    
T  14015746 ggtgcaaaatcgcacgattgacaaaagataaaggaaaaaagtgcaattaaacc 14015694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 18874935 - 18874887
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaatt 52  Q
    ||||||||||||||||||||  |||||||||||||  ||||||||||||    
T  18874935 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaatt 18874887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 26540744 - 26540693
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaa 55  Q
    |||||||||||| ||||||||||||||| |||||||  |||||||||||||||    
T  26540744 ggggtgcaaaattgcacaattgacaaaaaatagggg-caaaagtgcaattaaa 26540693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 18875191 - 18875242
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||| ||||||  |||||||||||||  ||||||||||||||    
T  18875191 ggggtgcaaaatcgtacaattagcaaaagatagggggcaaaagtgcaattaa 18875242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 9026789 - 9026736
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||| |||||||| |||||||||||| | ||||| ||||||||||||    
T  9026789 ggggtgcaaaattgcacaattaacaaaagataggag-gaaaaatgcaattaaacc 9026736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 23630035 - 23630089
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||  ||||| ||||| |  |||||||||||||||||    
T  23630035 ggggtgcaaaatcgcacaattaccaaaaaataggaggaaaaagtgcaattaaacc 23630089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22429594 - 22429646
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||| | | |||||||||||||    
T  22429594 atggggtgcaaaatcgcacaattgacaaactataggag-ggaaagtgcaattaa 22429646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24485458 - 24485510
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||| ||| |||||||||||||||    
T  24485458 atggggtgcaaaatcgcacaattggcaaactata-gggagaaaagtgcaattaa 24485510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 36180988 - 36181041
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||| ||||||||||||||| |||||  ||||||  |||||||||||||||    
T  36180988 atggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaa 36181041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 40848576 - 40848524
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||| ||||||||||||||| ||||  ||||||| |||||||||||||||    
T  40848576 atggggtgtaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaa 40848524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 47665963 - 47665914
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||  ||| |||  ||||||||||||||    
T  47665963 ggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaa 47665914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 3353553 - 3353604
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||| ||||  ||||||| ||||||||||| ||||||    
T  3353553 ggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaactaaacc 3353604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 14015873 - 14015925
Alignment:
Q  6 gtgcaaaatcgcacaattgac-aaaagataggggtg-aaaagtgcaattaaac 56  Q
    ||||||||||||||||||| | |||||||||||| | ||||||||||||||||    
T  14015873 gtgcaaaatcgcacaattggcaaaaagataggggggcaaaagtgcaattaaac 14015925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 17441066 - 17441114
Alignment:
Q  6 gtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||| ||||||||||| |  ||||| |||||||||    
T  17441066 gtgcaaaatcgcacaattaacaaaagatagagaggaaaaatgcaattaa 17441114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22851446 - 22851393
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22851446 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 22851393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13027279 - 13027335
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13027279 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacc 13027335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9822804 - 9822751
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9822804 atggggtgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaa 9822751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9823359 - 9823412
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9823359 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 9823412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39724046 - 39724099
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39724046 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 39724099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 15156185 - 15156236
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  15156185 ggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaa 15156236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3307394 - 3307341
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  3307394 atgggatgcaaaatcgcacaattgacaaaagataggggtgaaaaatgcaattaa 3307341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 13026687 - 13026638
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13026687 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 13026638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 765788 - 765737
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  765788 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 765737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 15155937 - 15155886
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  15155937 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 15155886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 37752416 - 37752467
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  37752416 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 37752467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 41662403 - 41662454
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  41662403 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 41662454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 12281176 - 12281127
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  12281176 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 12281127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13937387 - 13937440
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||| ||||||||||||||||| ||||||| |||||||||||||||    
T  13937387 atggggtgcaaattcgcacaattgacaaaaaataggggggaaaagtgcaattaa 13937440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23123394 - 23123341
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  23123394 atggggtgtaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaa 23123341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34498178 - 34498122
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||||||||  |||||||  |||||||||||||||||    
T  34498178 atggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaaacc 34498122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 12281426 - 12281477
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  12281426 ggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaa 12281477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 16929242 - 16929293
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  16929242 ggggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaattaa 16929293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 43162539 - 43162588
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaatta 53  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  43162539 ggggtgcaaaatcgcacgattgacaaaagatagggg-gaaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13936778 - 13936726
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||||||||    
T  13936778 atggggtgcaaaatcgcacaattggtaaaagatagggg-gaaaagtgcaattaa 13936726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24473766 - 24473819
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  |||||| ||||||||||||||||    
T  24473766 atggggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaattaa 24473819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25438848 - 25438795
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  25438848 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 25438795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37752140 - 37752087
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||  ||||| ||||||| |||||||||||||||    
T  37752140 atggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaa 37752087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25439124 - 25439179
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||||||||  |||||||  |||||||||||||||||    
T  25439124 atggggtgcaaaatcgcacaattgacaaactatagggg-aaaaagtgcaattaaacc 25439179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 34313817 - 34313768
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||||||    
T  34313817 ggggtgcaaaatcgcacaattaacaaaagataggg--gaaaagtgcaattaa 34313768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 74864 - 74915
Alignment:
Q  6 gtgcaaaatcgcacaattgac-aaaagataggggtgaaaagtgcaattaaac 56  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  74864 gtgcaaaatcgcacaattgacaaaaagataggggacaaaagtgcaattaaac 74915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 16928996 - 16928945
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||||||||||| | |||||||||||||    
T  16928996 ggggtgcaaaatcgcacaattagcaaaagatagggggggaaagtgcaattaa 16928945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 43245925 - 43245874
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  |||||||||||||  ||||||||||||||    
T  43245925 ggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgcaattaa 43245874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 43246176 - 43246227
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||| |||||||  ||||||||||||| |||||||||||||||    
T  43246176 ggggtgcaaaatcacacaattagcaaaagataggggggaaaagtgcaattaa 43246227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 6092831 - 6092794
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatagggg 38  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  6092831 atgggatgcaaaatcgcacaattgacaaaagatagggg 6092794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 15042198 - 15042145
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||| |||||||| ||||||||| ||| | ||||||||||||||||    
T  15042198 gggtgcaaaatcacacaattggcaaaagataaggggggaaagtgcaattaaacc 15042145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 22851958 - 22852007
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||| |||||||||||| |||||| | |||||||    
T  22851958 ggtgcaaaatcgcacaattggcaaaagatagggatgaaaaatacaattaa 22852007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34498553 - 34498606
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||  ||||  ||||||| |||||||||||||||    
T  34498553 atggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaa 34498606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37396764 - 37396711
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| | ||||  ||||||| |||||||||||||||    
T  37396764 atggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaa 37396711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37397143 - 37397196
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||| ||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  37397143 atggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37397196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 43162285 - 43162237
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  43162285 ggtgcaaaatcgcacaattaacaaaatatagggg-gaaaagtgcaattaa 43162237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 15444645 - 15444701
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||||||||||||||||||||||  |||  |||||||  |||||||||||||||||    
T  15444645 atggggtgcaaaatcgcacaattggtaaattatagggggaaaaagtgcaattaaacc 15444701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 18020088 - 18020137
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||||||   ||||||||||||||    
T  18020088 ggggtgcaaaatcgcacaattaacaaaagataggg--taaaagtgcaattaa 18020137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39723458 - 39723415
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaa 44  Q
    ||||| |||||||||||||||||| |||||||||| ||||||||    
T  39723458 atgggatgcaaaatcgcacaattggcaaaagatagaggtgaaaa 39723415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 41662161 - 41662110
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||| |||  ||| ||||||||||    
T  41662161 ggggtgcaaaatcgcacaattaacaaaagatatggggaaaatgtgcaattaa 41662110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 3463946 - 3463996
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||| |||||||||||  ||||| ||||||| |||||||||||||||    
T  3463946 gggtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaattaa 3463996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 9465874 - 9465908
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggg 37  Q
    ||||||||||||||||||||| |||||||||||||    
T  9465874 ggggtgcaaaatcgcacaattaacaaaagataggg 9465908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6199094 - 6199147
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||| |||||||||||||||||| ||||  ||||||  |||||||||||||||    
T  6199094 atgggatgcaaaatcgcacaattggcaaactatagggaagaaaagtgcaattaa 6199147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15442819 - 15442766
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||| |||||||| | ||| ||||||| ||||| |||||||||    
T  15442819 atggggtgcaaaatcacacaattggcgaaatataggggggaaaaatgcaattaa 15442766  T

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Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 17431339 - 17431290
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||| ||||||||||||||||||||  ||| ||| |||||||||||||||    
T  17431339 ggtgaaaaatcgcacaattgacaaactatatgggggaaaagtgcaattaa 17431290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 22786987 - 22786934
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaa-agataggggtgaaaagtgcaattaaac 56  Q
    |||||||||||||||||| ||||||| ||||| |||  ||||||||||||||||    
T  22786987 gggtgcaaaatcgcacaactgacaaatagataaggggcaaaagtgcaattaaac 22786934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24473399 - 24473346
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||| |||||||| ||||  |||||||  ||||||||||||||    
T  24473399 atggggtgcaaaatcacacaattggcaaactatagggggaaaaagtgcaattaa 24473346  T

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Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 41662573 - 41662524
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||| ||||  ||| ||| |||||||||||||||    
T  41662573 ggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaa 41662524  T

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Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 3463695 - 3463659
Alignment:
Q  2 tggggtgcaaaatcgcacaattgacaaaagatagggg 38  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  3463695 tggggtgcaaaattgcacaattaacaaaagatagggg 3463659  T

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Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 9465653 - 9465610
Alignment:
Q  10 aaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||| ||||||||||||||||||||| | |||||||||||||||    
T  9465653 aaaattgcacaattgacaaaagataggag-gaaaagtgcaattaa 9465610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 22786892 - 22786840
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||||||||| |||||||   ||||||||||||  |||||||||||||||||    
T  22786892 ggtgcaaaatcacacaattagtaaaagatagggggaaaaagtgcaattaaacc 22786840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 37670004 - 37669956
Alignment:
Q  8 gcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaac 56  Q
    ||||||| |||||||| |||||||||| ||  |||||||||||||||||    
T  37670004 gcaaaattgcacaattaacaaaagataaggaggaaaagtgcaattaaac 37669956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 1e-21; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 36096473 - 36096529
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  36096473 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaaacc 36096529  T

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Target: chr4; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50678835 - 50678782
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  50678835 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 50678782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24775781 - 24775834
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  24775781 atggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaa 24775834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36095873 - 36095820
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  36095873 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaa 36095820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45830194 - 45830247
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  45830194 atggggtgtaaaatcgcacaattgacaaaagataggggtgaaaagtgcgattaa 45830247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 50679422 - 50679475
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  50679422 atggggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaa 50679475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 56505749 - 56505696
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  56505749 atggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 56505696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 43050663 - 43050607
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||    
T  43050663 atggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaaacc 43050607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 13198906 - 13198957
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  13198906 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 13198957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 23540253 - 23540303
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  23540253 gggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaa 23540303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 49178816 - 49178866
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaatta 53  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  49178816 ggggtgcaaaatcgcacaattggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9023678 - 9023731
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  9023678 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 9023731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39744463 - 39744516
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  39744463 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 39744516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43051250 - 43051303
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||    
T  43051250 atggggtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaa 43051303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 16555569 - 16555518
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  16555569 ggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaa 16555518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 18077202 - 18077253
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  18077202 ggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaa 18077253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 22681628 - 22681578
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  22681628 ggggtgcaaaatcgcacaattgacaaaagatagggg-ggaaagtgcaattaa 22681578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 169437 - 169490
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| ||||| |||||||||    
T  169437 atggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaa 169490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 293215 - 293268
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  |||||||  ||||||||||||||    
T  293215 atggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 293268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9023300 - 9023247
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  9023300 atggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaa 9023247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 13198657 - 13198604
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaac 56  Q
    |||||||||||||||||||||| |||||||||  || |||||||||||||||||    
T  13198657 ggggtgcaaaatcgcacaattggcaaaagataaaggagaaaagtgcaattaaac 13198604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16555815 - 16555868
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||  ||||||||| ||| |||||||||||||||    
T  16555815 atggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaa 16555868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25161934 - 25161881
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  25161934 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 25161881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28196402 - 28196349
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  28196402 atggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaa 28196349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28196771 - 28196824
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  28196771 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 28196824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32703648 - 32703701
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  32703648 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 32703701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 43292093 - 43292040
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  |||||||  ||||||||||||||    
T  43292093 atggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaa 43292040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 47219203 - 47219255
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||  |||||||||| |||||||| ||||||||||||    
T  47219203 ggtgcaaaatcgcacaattagcaaaagatagaggtgaaaaatgcaattaaacc 47219255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 3930480 - 3930530
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  3930480 ggggtgcaaaatcgcacaattagcaaaagatagggg-gaaaagtgcaattaa 3930530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4239364 - 4239417
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  |||||||  ||||||||||||||    
T  4239364 atggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 4239417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5206044 - 5205991
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||  |||| |||||||||||||  |||||||||||||||    
T  5206044 atggggtgcaaaatcgccaaattaacaaaagatagggaggaaaagtgcaattaa 5205991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9380363 - 9380310
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||| ||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  9380363 atggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9380310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9380739 - 9380792
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||| ||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  9380739 atggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9380792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11241659 - 11241711
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||| |||||||    
T  11241659 atggggtgcaaaatcccacaattggcaaaagatagggg-gaaaagtacaattaa 11241711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11529224 - 11529171
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||| |||||||| |||||| |||||  |||||||||||||||    
T  11529224 atggggtgcaaaatcacacaattggcaaaagttagggaggaaaagtgcaattaa 11529171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 22681881 - 22681930
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||| |||||||| |||||||||||| | |||||||||||||||    
T  22681881 ggtgcaaaattgcacaattaacaaaagataggagggaaaagtgcaattaa 22681930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26207744 - 26207797
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| ||||| |||||||||    
T  26207744 atggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 26207797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 56506580 - 56506625
Alignment:
Q  9 caaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||| ||||||||| ||||||||| |||||||||||||||||||    
T  56506580 caaaattgcacaattggcaaaagataagggtgaaaagtgcaattaa 56506625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 8182046 - 8181994
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaa-gataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| ||||| ||||||||  ||||||||||||||    
T  8182046 ggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaa 8181994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 8182172 - 8182224
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaaga-taggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||| | ||||||||||||||||||||||    
T  8182172 ggggtgcaaaatcgcacaattagcaaaaaaataggggtgaaaagtgcaattaa 8182224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 11241439 - 11241392
Alignment:
Q  7 tgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||| |||||||||| ||  |||||||||||||||    
T  11241439 tgcaaaatcgcacaattaacaaaagataaggaggaaaagtgcaattaa 11241392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 32703279 - 32703228
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||| ||||||||||||| ||||  ||||||| |||||||||||||||    
T  32703279 ggggtgcataatcgcacaattggcaaattataggggggaaaagtgcaattaa 32703228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 35393776 - 35393826
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||| ||||||||||  ||||||||| |||||||||||||||||||    
T  35393776 ggggtgcaaattcgcacaattagcaaaagata-gggtgaaaagtgcaattaa 35393826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 169070 - 169016
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagata-ggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||| |||| |||||||||||||||    
T  169070 atggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaa 169016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 5206231 - 5206280
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||| | |||||||| ||| |||||||||||||||    
T  5206231 gggtgcaaaatcgcacaatt-aaaaaagataagggggaaaagtgcaattaa 5206280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 25225399 - 25225449
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| ||||||||||| |  | ||||||||||||    
T  25225399 gggtgcaaaatcgcacaattggcaaaagataggagacagaagtgcaattaa 25225449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 45829047 - 45828997
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||| ||||||||||||||||  |||||||||| ||||||||| |||||||    
T  45829047 gggtacaaaatcgcacaattggtaaaagataggagtgaaaagtacaattaa 45828997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 49178694 - 49178644
Alignment:
Q  3 ggggtgcaaaatcgcacaattgac-aaaagataggggtgaaaagtgcaatt 52  Q
    |||||||||||||||||||||| | ||||||||||||  ||||||||||||    
T  49178694 ggggtgcaaaatcgcacaattggcaaaaagatagggggcaaaagtgcaatt 49178644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 24775695 - 24775642
Alignment:
Q  4 gggtgcaaaatcgcacaattgac-aaaagataggggtgaaaagtgcaattaaac 56  Q
    |||| |||||||||||||||||| |||| |||||||  ||||||||||||||||    
T  24775695 gggtacaaaatcgcacaattgacaaaaatatagggggcaaaagtgcaattaaac 24775642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26207416 - 26207364
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| | |||||||||||||    
T  26207416 atggggtgcaaaatcgcacaattggcaaactatagggg-ggaaagtgcaattaa 26207364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 39086625 - 39086674
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||| ||||  ||| ||| |||||||||||||||    
T  39086625 ggtgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaattaa 39086674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 7603197 - 7603148
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||| |||||||| | |||||||||||  |||||||||||||||    
T  7603197 ggggtgcaaaattgcacaattaaaaaaagataggg--gaaaagtgcaattaa 7603148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 7603422 - 7603469
Alignment:
Q  6 gtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||  ||||||||||||  ||||||||||||||    
T  7603422 gtgcaaaatcgcacaattgtaaaaagatagggg-aaaaagtgcaattaa 7603469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44599545 - 44599492
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  44599545 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 44599492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 44600133 - 44600186
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  44600133 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 44600186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13863369 - 13863316
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  13863369 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaa 13863316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18864023 - 18863967
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  18864023 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 18863967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 3687656 - 3687707
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  3687656 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 3687707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 9412325 - 9412376
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  9412325 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 9412376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8643764 - 8643817
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  8643764 atggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaa 8643817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13863955 - 13864007
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  13863955 atggggtgcaaa-tcgcacaattggcaaaagataggggtgaaaagtgcaattaa 13864007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17157023 - 17156970
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  17157023 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 17156970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20419322 - 20419375
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  20419322 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 20419375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22740212 - 22740159
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  22740212 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 22740159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 20418944 - 20418888
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||    
T  20418944 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacc 20418888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 3205093 - 3205144
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  3205093 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 3205144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 9412077 - 9412026
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  9412077 ggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaa 9412026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22740589 - 22740643
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaac 56  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||||    
T  22740589 atggggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaattaaac 22740643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 27096346 - 27096395
Alignment:
Q  7 tgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  27096346 tgcaaaatcacacaattgacaaaagatagggg-gaaaagtgcaattaaacc 27096395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 27181957 - 27181908
Alignment:
Q  7 tgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  27181957 tgcaaaatcacacaattgacaaaagatagggg-gaaaagtgcaattaaacc 27181908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9035291 - 9035344
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  9035291 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9035344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10533090 - 10533037
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  10533090 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 10533037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 13744231 - 13744283
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  13744231 atggggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaattaa 13744283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37888889 - 37888836
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  37888889 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37888836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37889257 - 37889310
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  37889257 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37889310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37972394 - 37972447
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  37972394 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37972447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48359375 - 48359323
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  48359375 atggggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaattaa 48359323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 3687408 - 3687356
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagata-ggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||| |||| |||||||||||||||    
T  3687408 ggggtgcaaaatcgcacaattaacaaaagatagggggggaaaagtgcaattaa 3687356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36527439 - 36527384
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||||||||  |||||||  |||||||||||||||||    
T  36527439 atggggtgcaaaatcgcacaattgacaaactatagggg-aaaaagtgcaattaaacc 36527384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5349731 - 5349781
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||| ||||||||||||||   |||||||||||||    
T  5349731 atggggtgcaaaatcgcacaattaacaaaagatagggg---aaagtgcaattaa 5349781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 8953889 - 8953939
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||| |||||||| |||||||||||||| |||||||||||||||    
T  8953889 ggggtgcaaaattgcacaattaacaaaagatagggg-gaaaagtgcaattaa 8953939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 13772901 - 13772952
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  |||| |||||||| |||||||||||||||    
T  13772901 ggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaa 13772952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 6908265 - 6908216
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||| |||| ||||||||| |||||||||||||||    
T  6908265 gggtgcaaaatcgcacaattaacaatagatagggg-gaaaagtgcaattaa 6908216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 38191566 - 38191616
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||| |||| ||||||||||||||| |||| |||||||||    
T  38191566 gggtgcaaaatcgcataattaacaaaagataggggtaaaaaatgcaattaa 38191616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13772697 - 13772644
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||| |||||||  ||||||||||||  |||||||||||||||    
T  13772697 atggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaa 13772644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29292978 - 29292925
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||| |||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  29292978 atgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 29292925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30857902 - 30857955
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||| ||||||||||||||||||| | |  ||||||||||||||    
T  30857902 atggggtgcaaaattgcacaattgacaaaagataagagacaaaagtgcaattaa 30857955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37972016 - 37971963
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  | ||||| |||||||||||||||    
T  37972016 atggggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaa 37971963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 38826915 - 38826964
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||  ||||||| ||||| |||||||||    
T  38826915 ggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaa 38826964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 5735303 - 5735255
Alignment:
Q  6 gtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||  | ||||||||||| |||||||||||||||    
T  5735303 gtgcaaaatcgcacaattagccaaagataggggagaaaagtgcaattaa 5735255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 9034921 - 9034870
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||| ||||||||||||| ||||  ||||||| |||||||||||||||    
T  9034921 ggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaattaa 9034870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 5735553 - 5735599
Alignment:
Q  9 caaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaa 55  Q
    ||||||||||||||| | ||||||||||||  |||||||||||||||    
T  5735553 caaaatcgcacaattaataaaagatagggggaaaaagtgcaattaaa 5735599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 42419029 - 42419082
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||||||||| |||||||||| ||||  ||||||| ||||||||||||||||||    
T  42419029 ggggtgcaaaaacgcacaattggcaaactatagggg-gaaaagtgcaattaaacc 42419082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13741613 - 13741560
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||||  |||  ||||||| ||||| |||||||||    
T  13741613 atggggtgcaaaatcgcacaattggtaaactataggggggaaaaatgcaattaa 13741560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 18925114 - 18925065
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||| ||||||||  ||||||||||||  |||||||||||||||    
T  18925114 ggtgcaaaattgcacaattagcaaaagatagggaagaaaagtgcaattaa 18925065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 23686723 - 23686768
Alignment:
Q  9 caaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||  |||||||||||||  ||||||||||||||    
T  23686723 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaa 23686768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 29293344 - 29293397
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||| ||||||||||||||||||| ||||  ||||||| ||||| |||||||||    
T  29293344 atggagtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 29293397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 35080221 - 35080254
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagata 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  35080221 atggggtgcaaaatcgcacaattaacaaaagata 35080254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 46816309 - 46816362
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||| |||||  ||||||||| ||  ||||||||||||||    
T  46816309 atggggtgcaaaatcgcataattggtaaaagatagcgggaaaaagtgcaattaa 46816362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 6908485 - 6908536
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaac 56  Q
    ||||||||||||||||||||  ||||| ||||||| | |||||||||||||||    
T  6908485 gggtgcaaaatcgcacaattagcaaaaaatagggg-ggaaagtgcaattaaac 6908536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33829046 - 33828993
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33829046 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 33828993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33829634 - 33829687
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33829634 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 33829687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 18241908 - 18241857
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  18241908 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 18241857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3403773 - 3403720
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  3403773 atggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 3403720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7654546 - 7654599
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  7654546 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 7654599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 31598726 - 31598781
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  31598726 atgggatgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaaacc 31598781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 3403989 - 3404040
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  3403989 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 3404040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 21032285 - 21032331
Alignment:
Q  8 gcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||    
T  21032285 gcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 21032331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 10039729 - 10039679
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  10039729 ggggtgcaaaatcgcacaattagcaaaagatagggg-gaaaagtgcaattaa 10039679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 11656782 - 11656833
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||||||||| | |||||||||||||||    
T  11656782 ggggtgcaaaatcgcacaattagcaaaagataggagagaaaagtgcaattaa 11656833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 12714481 - 12714431
Alignment:
Q  7 tgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||| ||||    
T  12714481 tgcaaaatcgcacaattaacaaaagatagggggcaaaagtgcaattcaacc 12714431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 21032155 - 21032101
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaa-aagataggggtgaaaagtgcaattaaac 56  Q
    |||||||||||||||||||||||||| ||||||||||  |||||||||| |||||    
T  21032155 ggggtgcaaaatcgcacaattgacaagaagatagggggcaaaagtgcaactaaac 21032101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 30388362 - 30388416
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||  |||||||||||||  |||||| ||||||||||    
T  30388362 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtacaattaaacc 30388416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 10087856 - 10087909
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  | ||||| |||||||||||||||    
T  10087856 atggggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaattaa 10087909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 33974297 - 33974350
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| ||||| |||||||||    
T  33974297 atggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaa 33974350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32733994 - 32734050
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||| |||||||||||||||||| ||||  ||||||  ||||||||||||||||||    
T  32733994 atgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaaacc 32734050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 3825580 - 3825530
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||| ||||||| |||||||||||||||    
T  3825580 ggggtgcaaaatcgcacaattagcaaaatatagggg-gaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 18242156 - 18242207
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| ||||||||||||   |||| |||||||||    
T  18242156 ggggtgcaaaatcgcacaattggcaaaagatagggaaaaaaaatgcaattaa 18242207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 21032032 - 21031982
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  |||||| |||||| |||||||||||||||    
T  21032032 ggggtgcaaaatcgcacaattagcaaaagttagggg-gaaaagtgcaattaa 21031982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 23250645 - 23250595
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||| ||| ||||||||||||||||||||||  ||||||||||||||    
T  23250645 ggggtgcaagatctcacaattgacaaaagatagggg-aaaaagtgcaattaa 23250595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2354808 - 2354861
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||  | ||||| |||||||||    
T  2354808 atggggtgcaaaatcgcacaattgacaaactatagacgggaaaaatgcaattaa 2354861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 23250772 - 23250823
Alignment:
Q  5 ggtgcaaaatcgcacaattga-caaaagataggggtgaaaagtgcaattaaac 56  Q
    ||||||||||||||||||| | ||||| |||||||| ||||||||||||||||    
T  23250772 ggtgcaaaatcgcacaattaaccaaaatataggggt-aaaagtgcaattaaac 23250823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 31598157 - 31598201
Alignment:
Q  10 aaaatcgcacaattgac-aaaagataggggtgaaaagtgcaatta 53  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||    
T  31598157 aaaatcgcacaattgacaaaaagatagggggcaaaagtgcaatta 31598201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 31598641 - 31598685
Alignment:
Q  10 aaaatcgcacaattgac-aaaagataggggtgaaaagtgcaatta 53  Q
    ||||||||||||||||| ||||||||||||  |||||||||||||    
T  31598641 aaaatcgcacaattgacaaaaagatagggggcaaaagtgcaatta 31598685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 9e-20; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18817609 - 18817662
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18817609 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 18817662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11351425 - 11351481
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  11351425 atggggtgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaaacc 11351481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18817008 - 18816955
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  18817008 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaa 18816955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 31569958 - 31569907
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31569958 ggtgcaaaatcgcacaattgacaaaagatagggg-gaaaagtgcaattaaacc 31569907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 18433316 - 18433367
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  18433316 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 18433367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 25116061 - 25116112
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  25116061 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 25116112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 25175151 - 25175202
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  25175151 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaa 25175202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18433071 - 18433018
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  18433071 atggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 18433018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19514961 - 19515014
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  19514961 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 19515014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21207282 - 21207226
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||    
T  21207282 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacc 21207226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 25115811 - 25115760
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||| |||||||| ||||||||||||| |||||||||||||||    
T  25115811 ggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaa 25115760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 25174903 - 25174852
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||| |||||||| ||||||||||||| |||||||||||||||    
T  25174903 ggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaa 25174852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 33324838 - 33324889
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  33324838 ggggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaa 33324889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11350863 - 11350811
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| |||||||||    
T  11350863 atggggtgcaaaat-gcacaattggcaaaagataggggtgaaaaatgcaattaa 11350811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 12498623 - 12498570
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  12498623 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 12498570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 12498926 - 12498979
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  12498926 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 12498979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26020506 - 26020453
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||  ||||||||||||  |||||||||||||||    
T  26020506 atggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaa 26020453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26570785 - 26570732
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||| ||||||    
T  26570785 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaa 26570732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26571162 - 26571215
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  26571162 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 26571215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 41382945 - 41382893
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  41382945 gggtgcaaaatcgcacaattaacaaaagataggggggaaaa-tgcaattaaacc 41382893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10098939 - 10098994
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||||||||  ||||| | ||||||||||||||||||    
T  10098939 atggggtgcaaaatcgcacaattgacaaactataggag-gaaaagtgcaattaaacc 10098994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 16726130 - 16726084
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaat 51  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||    
T  16726130 ggtgcaaaatcgcacaattggcaaaagatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22428989 - 22428937
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||  ||||||||||||| | |||||||||||||    
T  22428989 atggggtgcaaaatcgcacaattagcaaaagatagggg-ggaaagtgcaattaa 22428937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22429194 - 22429246
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||  ||||||||||||| ||||| |||||||||    
T  22429194 atggggtgcaaaatcgcacaattagcaaaagatagggg-gaaaaatgcaattaa 22429246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22729438 - 22729490
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  22729438 atggggtgcaaaatcgcacaattggcaaattatagggg-gaaaagtgcaattaa 22729490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 34147512 - 34147561
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||  |||||||  ||||||||||||||    
T  34147512 ggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34147561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 43464194 - 43464242
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  43464194 ggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaattaa 43464242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2817205 - 2817149
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||| |||||||||||||||||| ||||  ||||||  ||||||||||||||||||    
T  2817205 atgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaaacc 2817149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9665611 - 9665558
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaac 56  Q
    |||||||||||||| ||||||||  ||||||||||||  |||||||||||||||||    
T  9665611 atggggtgcaaaattgcacaattagcaaaagataggg--gaaaagtgcaattaaac 9665558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 12441196 - 12441244
Alignment:
Q  9 caaaatcgcacaattgac-aaaagataggggtgaaaagtgcaattaaac 56  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  12441196 caaaatcgcacaattgacaaaaagatagggggcaaaagtgcaattaaac 12441244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 23011383 - 23011434
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaac 56  Q
    |||||||||||||||||||| |||||||||| |||  ||||||||||||||||    
T  23011383 gggtgcaaaatcgcacaattaacaaaagataaggg-aaaaagtgcaattaaac 23011434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34576922 - 34576867
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||| ||||||||||||||  ||||||||||||| | ||||||||||||||||    
T  34576922 atggggtgtaaaatcgcacaattagcaaaagatagggg-ggaaagtgcaattaaacc 34576867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 43463811 - 43463756
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||    
T  43463811 atggggtgcaaaatcgcacaattggcaaactataaggg-gaaaagtgcaattaaacc 43463756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 5187830 - 5187881
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||| |||||||| |||||||||| |||  ||||||||||||||    
T  5187830 ggggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaa 5187881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 16466746 - 16466793
Alignment:
Q  7 tgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||  ||||| ||||||| |||||||||||||||    
T  16466746 tgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaa 16466793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 25940574 - 25940524
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||||||  |||||||  |||| |||||||||    
T  25940574 gggtgcaaaatcgcacaattgacaaactataggggaaaaaaatgcaattaa 25940524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3888295 - 3888242
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||| ||||||| ||||  ||||||| |||| ||||||||||    
T  3888295 atggggtgcaaaatcgtacaattggcaaactataggggggaaatgtgcaattaa 3888242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 22629522 - 22629579
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagatagg-ggtgaaaagtgcaattaaacc 57  Q
    ||||||||||||||  || ||||||||||||||||| ||  |||||||||||||||||    
T  22629522 atggggtgcaaaattacataattgacaaaagataggagggaaaaagtgcaattaaacc 22629579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 34577162 - 34577214
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||| |||||||  |||||||||||||  ||||||||||||||    
T  34577162 atggggtgcaaaatcacacaattagcaaaagatagggg-aaaaagtgcaattaa 34577214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37610257 - 37610205
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||| |||||||| ||||  ||||||| |||||||||||||||    
T  37610257 atggggtgcaaaatcacacaattggcaaactatagggg-gaaaagtgcaattaa 37610205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37780375 - 37780323
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||| |||||||| ||||  ||||||| |||||||||||||||    
T  37780375 atggggtgcaaaatcacacaattggcaaactatagggg-gaaaagtgcaattaa 37780323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 3888660 - 3888716
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||| ||||||| ||||  ||| | | ||||||||||||||||||    
T  3888660 atggggtgcaaaatcgtacaattggcaaattataagagggaaaagtgcaattaaacc 3888716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11316972 - 11317028
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||| ||||  | || ||  |||||||||||||||||    
T  11316972 atggggtgcaaaatcgcacaattggcaaagtacagaggaaaaaagtgcaattaaacc 11317028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 22729058 - 22729011
Alignment:
Q  6 gtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||||||    
T  22729058 gtgcaaaatcgcacaatttacaaactatagggg-gaaaagtgcaattaa 22729011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 9e-20; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 2639480 - 2639533
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2639480 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 2639533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18296691 - 18296744
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18296691 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 18296744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26841643 - 26841590
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26841643 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 26841590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7591257 - 7591203
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaa 55  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  7591257 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaaa 7591203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2638876 - 2638823
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  2638876 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaa 2638823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18296132 - 18296079
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  18296132 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaa 18296079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26842236 - 26842289
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  26842236 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaa 26842289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 20347464 - 20347515
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  20347464 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 20347515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 30190977 - 30190926
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  30190977 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 30190926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7591848 - 7591901
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||||||||| ||||||  |||||||||    
T  7591848 atggggtgcaaaatcgcacaattgacaaaagataggagtgaaagatgcaattaa 7591901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8851580 - 8851633
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  8851580 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 8851633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24832387 - 24832334
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  24832387 atggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 24832334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8851204 - 8851148
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||    
T  8851204 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacc 8851148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18055314 - 18055370
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||||||||||||||||||||||||||||| ||| ||  |||||||||||||||||    
T  18055314 atggggtgcaaaatcgcacaattgacaaaaggtagagggaaaaagtgcaattaaacc 18055370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 6171456 - 6171507
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||| |||||||| ||||||||||||| |||||||||||||||    
T  6171456 ggggtgcaaaatcccacaattggcaaaagataggggggaaaagtgcaattaa 6171507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 11883677 - 11883626
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  11883677 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 11883626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 11883926 - 11883977
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  11883926 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 11883977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 26737781 - 26737832
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  26737781 ggggtgcaaaatcgcacagttagcaaaagataggggtgaaaagtgcaattaa 26737832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 30191225 - 30191276
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| | |||||||||||| |||||||||||||||    
T  30191225 ggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaa 30191276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 32673143 - 32673196
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||| |||||||||||||  |||||||||||||||||    
T  32673143 ggggtgcaaaatcgcacaattggcaaaagatagggg-aaaaagtgcaattaaacc 32673196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 40469729 - 40469783
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||  |||||||||||||  |||||||||||||||||    
T  40469729 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaaacc 40469783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 43495484 - 43495537
Alignment:
Q  3 ggggtgcaaaatcgcacaattgac-aaaagataggggtgaaaagtgcaattaaac 56  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  43495484 ggggtgcaaaatcgcacaattgacaaaaagatagggg-gaaaagtgcaattaaac 43495537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 6171207 - 6171159
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  6171207 ggtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaa 6171159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 6495723 - 6495772
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||||||    
T  6495723 ggtgcaaaatcgcacaattcacaaaagatagggaggaaaagtgcaattaa 6495772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7664304 - 7664251
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||||| |||  ||||||| |||||||||||||||    
T  7664304 atggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaa 7664251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7664671 - 7664724
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||  |||||||||||||||    
T  7664671 atggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaa 7664724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 15920832 - 15920779
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaac 56  Q
    ||||||||||||||||||||| |||||||||||| | |||||||| ||||||||    
T  15920832 ggggtgcaaaatcgcacaattaacaaaagataggagggaaaagtgaaattaaac 15920779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17851034 - 17850981
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  17851034 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 17850981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37720260 - 37720207
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  37720260 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 37720207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41790910 - 41790963
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||| ||||||||||||||||| ||||| ||||||| |||||||||||||||    
T  41790910 atggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaa 41790963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 26692452 - 26692396
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||||||||  |||| ||  |||||||||||||||||    
T  26692452 atggggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaaacc 26692396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26692818 - 26692874
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||| ||||  |||| || ||||||||||||||||||    
T  26692818 atggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaaacc 26692874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41790546 - 41790491
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||||||||  ||||||| ||||| ||||||||||||    
T  41790546 atggggtgcaaaatcgcacaattgacaaactatagggg-gaaaaatgcaattaaacc 41790491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 5378715 - 5378664
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  5378715 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 5378664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 20347217 - 20347166
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| ||||||||||| || |||||||| ||||||    
T  20347217 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgtaattaa 20347166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 29343633 - 29343583
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaa 55  Q
    ||||||||||| ||||||||||||||||||| |  ||||||||||||||||    
T  29343633 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaaa 29343583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18750124 - 18750176
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| || ||||||||||||    
T  18750124 atggggtgcaaaatcgcacaattgacaaactatagggg-gagaagtgcaattaa 18750176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 29230334 - 29230285
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||| ||||||||||||||||||| |  |||||||||||||||    
T  29230334 ggtgcaaaatcacacaattgacaaaagatagagaggaaaagtgcaattaa 29230285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 15321565 - 15321513
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaac 56  Q
    ||||||||||||||||| |||  ||||||||||||  ||||||||||||||||    
T  15321565 gggtgcaaaatcgcacagttggaaaaagataggggacaaaagtgcaattaaac 15321513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 5379959 - 5380010
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  5379959 ggggtgcaaaatcgcacaattggtaaactataggggggaaaagtgcaattaa 5380010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 6495519 - 6495470
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||| || ||||||||||  |||||||||||||||    
T  6495519 gggtgcaaaatcgcacaattaac-aaagatagggaggaaaagtgcaattaa 6495470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 32672895 - 32672845
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||| |||||||||| ||   ||||||||||||||    
T  32672895 gggtgcaaaatcgcacaattaacaaaagataaggaacaaaagtgcaattaa 32672845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6324973 - 6324924
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaa 50  Q
    ||||| |||||||||||||||||| ||||  ||||||| |||||||||||    
T  6324973 atgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 6324924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 6325349 - 6325398
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||| ||||  ||| ||| |||||||||||||||    
T  6325349 ggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaa 6325398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16910883 - 16910830
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  | | ||| |||||||||||||||    
T  16910883 atggggtgcaaaatcgcacaattggcaaactacatgggggaaaagtgcaattaa 16910830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16911267 - 16911319
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| | |||||||||||||    
T  16911267 atggggtgcaaaatcgcacaattggcaaactataggggcg-aaagtgcaattaa 16911319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 15321440 - 15321395
Alignment:
Q  7 tgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||| |||||||| |||||||||||||  |||||||||||||||    
T  15321440 tgcaaaattgcacaattaacaaaagataggg--gaaaagtgcaattaa 15321395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 26737534 - 26737485
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  |||||||||  || |||||||||||||||    
T  26737534 ggggtgcaaaatcgcacaattagcaaaagata--ggagaaaagtgcaattaa 26737485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 9e-20; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6002293 - 6002240
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6002293 atggggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaa 6002240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 48190827 - 48190774
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  48190827 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 48190774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 49284465 - 49284412
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  49284465 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 49284412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 8108991 - 8109044
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  8108991 atggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 8109044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 39691998 - 39692051
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  39691998 atggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaa 39692051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 48191353 - 48191406
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  48191353 atggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaa 48191406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28634155 - 28634211
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  28634155 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaaacc 28634211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 47955360 - 47955309
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  47955360 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaa 47955309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 8108775 - 8108721
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  8108775 ggggtgcaaaatcgcacaattaacaaaagatagggaggaaaagtgcaattaaacc 8108721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 1176890 - 1176837
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaac 56  Q
    |||||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  1176890 ggggtgcaaaattgcacaattgacaaaagatagggggtaaaagtgcaattaaac 1176837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6002892 - 6002945
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  6002892 atggggtgcaaaatcgcacaattgcgaaaagatagggatgaaaagtgcaattaa 6002945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 22149701 - 22149753
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  22149701 ggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaaacc 22149753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 42611616 - 42611668
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  42611616 ggtgcaaaatcgcacaattgacaaactataggggagaaaagtgcaattaaacc 42611668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 48104734 - 48104678
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||    
T  48104734 atggggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaattaaacc 48104678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 50430079 - 50430135
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||||    
T  50430079 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacc 50430135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 17518602 - 17518652
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  17518602 ggggtgcaaaatcgcacaattggcaaaagatagggg-gaaaagtgcaattaa 17518652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 31848192 - 31848243
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  31848192 ggggtgcaaaatcgtacaattaacaaaagataggggagaaaagtgcaattaa 31848243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 47955608 - 47955659
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| | |||||||||||| |||||||||||||||    
T  47955608 ggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaa 47955659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 9347182 - 9347129
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  9347182 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 9347129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20480223 - 20480171
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  20480223 atggggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaattaa 20480171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 26814750 - 26814697
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||  |||||||||||||||    
T  26814750 atggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaa 26814697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 26815117 - 26815170
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||||| |||  ||||||| |||||||||||||||    
T  26815117 atggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaa 26815170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32163041 - 32163094
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  32163041 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 32163094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 44911081 - 44911028
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||| ||||||| | |||||||||||||    
T  44911081 atggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaa 44911028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 50615619 - 50615671
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  50615619 atggggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaattaa 50615671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 50623447 - 50623499
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  50623447 atggggtgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaattaa 50623499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 999167 - 999112
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||| |||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  999167 atgggatgcaaaatcgcacaattgacaaactatagggg-gaaaagtgcaattaaacc 999112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 46823899 - 46823843
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||| ||||||||||||||||||| ||||  ||||||| ||||||||||||||||||    
T  46823899 atggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacc 46823843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 13589659 - 13589709
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  13589659 ggggtgcaaaatcgcacaattagcaaaagatagggg-gaaaagtgcaattaa 13589709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 41083211 - 41083261
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||| | |||||||||||||| |||||||||||||||    
T  41083211 ggggtgcaaaatcgcacaactaacaaaagatagggg-gaaaagtgcaattaa 41083261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 50615289 - 50615243
Alignment:
Q  8 gcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||||    
T  50615289 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 50615243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 50623117 - 50623071
Alignment:
Q  8 gcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||  ||||||| |||||||||||||||    
T  50623117 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 50623071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6703892 - 6703945
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||| ||||||||| ||||  ||||||| |||||||||||||||    
T  6703892 atggggtgcaaaattgcacaattggcaaactataggggagaaaagtgcaattaa 6703945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 19008748 - 19008801
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  19008748 atggggtgcaaaatcgcacaattgcgaaactataggggggaaaagtgcaattaa 19008801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21687081 - 21687028
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||  |||||||||||||  ||||||| |||||||||||||||    
T  21687081 atggggtgcaaaattacacaattgacaaactataggggggaaaagtgcaattaa 21687028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 27172171 - 27172119
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  27172171 atggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaa 27172119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 47498493 - 47498545
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||| |||||||||||||||  ||||||| |||||||||||||||    
T  47498493 atggggtgcaaaaccgcacaattgacaaactatagggg-gaaaagtgcaattaa 47498545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 48105114 - 48105167
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||| ||| |||||||||||||||    
T  48105114 atggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 48105167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 50526470 - 50526523
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  |||||||  ||||||||||||||    
T  50526470 atggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 50526523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 42611237 - 42611185
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||    
T  42611237 ggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaaacc 42611185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 17518356 - 17518306
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| |||||||||| ||| |||| ||||||||||    
T  17518356 ggggtgcaaaatcgcacaattaacaaaagataaggg-gaaaggtgcaattaa 17518306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 20371353 - 20371403
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  20371353 ggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaa 20371403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 22149455 - 22149406
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||    
T  22149455 ggggtgcaaaatcgcacaatt-accaaagatagggg-gaaaagtgcaattaa 22149406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 41082959 - 41082912
Alignment:
Q  7 tgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||| |||||||||||||  |||||| |||||||    
T  41082959 tgcaaaatcgcacaattggcaaaagatagggggaaaaagtacaattaa 41082912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 1177018 - 1177072
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    |||||||||||| ||||||||  | ||||||||||  ||||||||||||||||||    
T  1177018 ggggtgcaaaattgcacaattagcgaaagatagggaggaaaagtgcaattaaacc 1177072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 20480613 - 20480662
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  20480613 gggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaa 20480662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 50949569 - 50949615
Alignment:
Q  7 tgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaatta 53  Q
    |||||||||||||||||||||||  ||||||| | ||||||||||||    
T  50949569 tgcaaaatcgcacaattgacaaactatagggggggaaagtgcaatta 50949615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4692431 - 4692484
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||| ||||||||| ||||  |||||||  ||||||||||||||    
T  4692431 atggggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaa 4692484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 13918502 - 13918449
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||| |  ||||||||||||||    
T  13918502 atggggtgcaaaatcgcacaattggcaaactataggaggaaaaagtgcaattaa 13918449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 13918869 - 13918918
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||| ||||  ||||||  |||||||||||||||    
T  13918869 ggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 13918918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 27172539 - 27172592
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||| |||||||||||||||||| ||||  | ||||| |||||||||||||||    
T  27172539 atgggatgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaattaa 27172592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 28633776 - 28633723
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||| ||||||| ||||  ||| ||| |||||||||||||||    
T  28633776 atggggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaattaa 28633723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33085727 - 33085674
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||  ||||||||||||| ||||||  ||||||| |||||||    
T  33085727 atggggtgcaaaatcaaacaattgacaaaatatagggtggaaaagtacaattaa 33085674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 44911438 - 44911491
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||||||||||||||||||| ||||  |||||||  |||| ||||||||||||    
T  44911438 gggtgcaaaatcgcacaattggcaaactatagggggaaaaaatgcaattaaacc 44911491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 49285053 - 49285086
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagata 34  Q
    |||||||||||||||||||||||| |||||||||    
T  49285053 atggggtgcaaaatcgcacaattggcaaaagata 49285086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31847951 - 31847895
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||| |||||||| ||||||||  ||||||||| ||| | ||||||||||||||||    
T  31847951 atgggatgcaaaattgcacaattagcaaaagataagggggtaaagtgcaattaaacc 31847895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6793 - 6846
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  6793 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaa 6846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6208 - 6155
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||| ||||||||||||||  |||||||||| ||||||||||||||||||    
T  6208 atggggtgtaaaatcgcacaattagcaaaagatagaggtgaaaagtgcaattaa 6155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 183416 - 183364
Alignment:
Q  4 gggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  183416 gggtgcaaaatcgtacaattgacaaaagatagggg-gaaaagtgcaattaaacc 183364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 438984 - 438933
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  438984 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 438933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 1172 - 1121
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  1172 ggggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtgcaattaa 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 1420 - 1471
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||||||||    
T  1420 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaa 1471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 6448 - 6397
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  6448 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 6397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 6697 - 6747
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  6697 ggggtgcaaaatcgcacaattagcaaaagatagggg-gaaaagtgcaattaa 6747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 25369 - 25420
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||  ||||||||||||| |||||||||||||||    
T  25369 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaa 25420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 45807 - 45857
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  45807 ggggtgcaaaatcgcacaattggcaaaagatagggg-gaaaagtgcaattaa 45857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 45587 - 45540
Alignment:
Q  6 gtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  45587 gtgcaaaatcgcacaattaacaaaagatagggg-gaaaagtgcaattaa 45540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 411976 - 411926
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  411976 ggggtgcaaaatcgcacaattgacaaaagatagggg-gtaaagtgcaattaa 411926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 386 - 333
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||| |||||||||||||||||||||||  ||||||| |||||||||||||||    
T  386 atgggatgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 761 - 813
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  |||||||  ||||||||||||||    
T  761 atggggtgcaaaatcgcacaattggcaaactatagggg-aaaaagtgcaattaa 813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 1786 - 1837
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaaacc 57  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||||||||||    
T  1786 ggtgcaaaatcgcacaataaacaaaagatagggg-gaaaagtgcaattaaacc 1837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1566 - 1514
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||||||| |||||||| |||||||||| ||  ||||||||||||||    
T  1566 atggggtgcaaaatcacacaattggcaaaagatagagg-aaaaagtgcaattaa 1514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 73141 - 73087
Alignment:
Q  3 ggggtgcaaaatcgcacaattgac-aaaagataggggtgaaaagtgcaattaaac 56  Q
    |||||||||||||||||| ||||| ||||||||||||  ||||||||||||||||    
T  73141 ggggtgcaaaatcgcacagttgacaaaaagataggggacaaaagtgcaattaaac 73087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 6659 - 6610
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    ||||||||||| ||||||| |||||||||||||| ||| |||||||||||    
T  6659 ggtgcaaaatcacacaattaacaaaagataggggggaacagtgcaattaa 6610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20041 - 20094
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||| ||||||||||||||||||||||  ||| ||| |||||||||||||||    
T  20041 atggggggcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaa 20094  T

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Target: scaffold0041 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 38693 - 38746
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  |||||||  ||||||||||||||    
T  38693 atggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaa 38746  T

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Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 185272 - 185325
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||||| ||||  ||||||  |||||||||||||||    
T  185272 atggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 185325  T

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Target: scaffold0017; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 184895 - 184842
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||| ||||| ||||||||  |||| || |||||||||||||||    
T  184895 atggggtgcaaaattgcacagttgacaaactatagaggagaaaagtgcaattaa 184842  T

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Target: scaffold0535 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Complemental strand, 10062 - 10015
Alignment:
Q  7 tgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||| ||||||| |||||||||||||  ||||||||||||||    
T  10062 tgcaaaatcgtacaattggcaaaagatagggggcaaaagtgcaattaa 10015  T

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Target: scaffold0069 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 50507 - 50557
Alignment:
Q  3 ggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  50507 ggggtgcaaaatcgcacaattggcaaactatagggg-gaaaagtgcaattaa 50557  T

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Target: scaffold0376 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7510 - 7458
Alignment:
Q  1 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||||||||||| ||||  |||||||||||||  ||||||||||||||    
T  7510 atggggtgcaaaatcgcataattagcaaaagatagggg-aaaaagtgcaattaa 7458  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 17158 - 17206
Alignment:
Q  5 ggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaa 54  Q
    |||||||||| ||||||||  ||||||||||||| |||||||||||||||    
T  17158 ggtgcaaaattgcacaattagcaaaagatagggg-gaaaagtgcaattaa 17206  T

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