View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17922_high_7 (Length: 388)
Name: NF17922_high_7
Description: NF17922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17922_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 6 - 386
Target Start/End: Complemental strand, 13090733 - 13090353
Alignment:
| Q |
6 |
tgcgcaagcccctctcaacatggggaaaagaattttgactcataatttaggaacatctaatgtttgttctgaaaaatgaatttgagagcatctaatcagc |
105 |
Q |
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| T |
13090733 |
tgcgcaagcccctctcaaaatggggaaaagaattttgactcatcatttaggaacatctaatgtttgttctgaacatgaaatttgagagcatctaatcagc |
13090634 |
T |
|
| Q |
106 |
tctccgttaatatagatatccttcttaggtacacttaaaattacagattgctcctcaactttctttatcagaagcttcagtaatggaaccttcaatagag |
205 |
Q |
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||||| ||| |||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13090633 |
tctcctttactatagatatccttcttagatacatttaaaattccagattgctcctcaactttctttatcagaagcttcagtaatggaaccttcaatagag |
13090534 |
T |
|
| Q |
206 |
ttttacgagaccccaccataatcaactttctctgtaatcacgaagcatgcataccaattacttatgtgaaagttatatgagtgaaaagtagaaagagttt |
305 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
13090533 |
ttttacgagaccccaccattatcaactttctctgtaatcacgaagcatgcataccaattacttatgtgaaagttatatgagtgaaaagtaggaagagttt |
13090434 |
T |
|
| Q |
306 |
gagcataacaaaattaccttagcacgagtaagagccacatttatcctgtgccagtctcccagcagagaagcgacgcagctt |
386 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
13090433 |
gagcataacaaaattaccttagcacgagtaagagccacatttatcctgtgccagtctcccagcagagaagcgacacagctt |
13090353 |
T |
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