View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17922_low_12 (Length: 243)
Name: NF17922_low_12
Description: NF17922
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17922_low_12 |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 40001323 - 40001535
Alignment:
| Q |
11 |
aagaatatggcaaagaaaatatggattgagtgaggctgagataatgtcagctaggtaagggaagttaaacaagtaatgaaggttaaattatgatgaatgg |
110 |
Q |
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| T |
40001323 |
aagaaaatggcaaagaaaatatggattgagtgaggctgagataatgtcagctaggtaagggaagttaaacaagtaatgaaggttaaattatgatgaatgg |
40001422 |
T |
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| Q |
111 |
aagaagttttgatcttttaaagacaatgacttgatcatggagagaagatattggaagaccatcctctcctttctacccacttttaaaatctttcttattt |
210 |
Q |
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| T |
40001423 |
aagaagttttgatcttttaaagacaatgacttgatcatggagagaagatattggaagaccatcctctcctttctacccacttttaaaatctttcttattt |
40001522 |
T |
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| Q |
211 |
ctacgaaatccat |
223 |
Q |
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||||||||||||| |
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| T |
40001523 |
ctacgaaatccat |
40001535 |
T |
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