View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17924_high_18 (Length: 365)
Name: NF17924_high_18
Description: NF17924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17924_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 34 - 347
Target Start/End: Original strand, 1036351 - 1036664
Alignment:
| Q |
34 |
ataaatcttggttgagaaagatttttgcatttagtgtataacacattttgaataagattttaaaaaatgaatgtaagaacaactattgactatcttataa |
133 |
Q |
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| T |
1036351 |
ataaatcttggttgagaaagatttttgcatttagtgtataacacattttgaataagattttaaaaaatgaatgtaagaacaactattgactatcttataa |
1036450 |
T |
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| Q |
134 |
attgagacctagtttgctacaatattttttaaacttggtatattttttgaaaaattcaccataaaaatttaatccacaatttcttaactatcagattaaa |
233 |
Q |
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| T |
1036451 |
attgagacctagtttgctacaatattttttaaacttggtatattttttgaaaaattcaccataaaaatttaatctacaatttcttaactatcagattaaa |
1036550 |
T |
|
| Q |
234 |
atcagacaaacattcaagcacatttaacataatatcaatgattgtaatgtgagaattgaactctggtccactctacacgcgatgatgaataatgactatt |
333 |
Q |
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| T |
1036551 |
atcagacaaacattcaagcacatttaacataatatcaatgattgtaatgtgagaattgaactctggtccactctacacgcgatgatgaataatgactatt |
1036650 |
T |
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| Q |
334 |
ttaaaaacctacct |
347 |
Q |
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|||||||||||||| |
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| T |
1036651 |
ttaaaaacctacct |
1036664 |
T |
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