View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17924_high_29 (Length: 247)
Name: NF17924_high_29
Description: NF17924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17924_high_29 |
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Alignment Details
Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 40512290 - 40512518
Alignment:
| Q |
1 |
ttgttttggccttttgagaaaagatacacaattgaagaatggtgttggaagatgatttaaaaaatagtctattgtggaaggactatgataaaactttgtt |
100 |
Q |
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| T |
40512290 |
ttgttttggtcttttgagaaaaggtacacaattgaagaatggtgttggaagatgatttaaaaaatagtccattgtggaaggactatgataaaactttgtt |
40512389 |
T |
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| Q |
101 |
ccttatgtgatctaaaggttaaaaagcaacttggtcatggtggggatgtttatcactttctcatgctaaatatcaccccatattagaccaatcatgtaat |
200 |
Q |
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| T |
40512390 |
cgttatgtgatctacaggttaaaaagcaacttggacatggtggggatgtttatcactttctcatgctaaatatcaccccgtattagaccaatgatgtaat |
40512489 |
T |
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| Q |
201 |
agtcaattaataacaagtccccctaatat |
229 |
Q |
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||||||||||||||||||| || |||||| |
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| T |
40512490 |
agtcaattaataacaagtcaccttaatat |
40512518 |
T |
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