View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17924_low_17 (Length: 386)

Name: NF17924_low_17
Description: NF17924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17924_low_17
NF17924_low_17
[»] chr6 (18 HSPs)
chr6 (1-49)||(10781147-10781195)
chr6 (1-49)||(6517503-6517551)
chr6 (1-48)||(7905244-7905291)
chr6 (1-46)||(7160807-7160852)
chr6 (1-46)||(22502777-22502822)
chr6 (1-49)||(21836408-21836456)
chr6 (1-49)||(22503152-22503200)
chr6 (1-49)||(31406878-31406926)
chr6 (1-49)||(32593490-32593538)
chr6 (1-46)||(21836035-21836080)
chr6 (1-46)||(31407256-31407301)
chr6 (1-49)||(7161182-7161230)
chr6 (2-49)||(14196615-14196662)
chr6 (2-49)||(15913927-15913974)
chr6 (1-46)||(15913551-15913596)
chr6 (2-46)||(7905622-7905666)
chr6 (2-48)||(14196965-14197011)
chr6 (2-46)||(25485956-25486000)
[»] chr1 (29 HSPs)
chr1 (1-49)||(20760883-20760931)
chr1 (1-49)||(8898517-8898565)
chr1 (1-49)||(17188954-17189002)
chr1 (1-49)||(25885371-25885419)
chr1 (1-49)||(30326496-30326544)
chr1 (1-49)||(37929418-37929466)
chr1 (1-49)||(40714444-40714492)
chr1 (1-49)||(40714821-40714869)
chr1 (1-49)||(45750220-45750268)
chr1 (1-49)||(49955725-49955773)
chr1 (1-49)||(8898895-8898943)
chr1 (1-49)||(17189229-17189277)
chr1 (1-49)||(28325181-28325229)
chr1 (1-49)||(31050950-31050998)
chr1 (1-49)||(32558485-32558533)
chr1 (1-49)||(45749842-45749890)
chr1 (1-49)||(49955347-49955395)
chr1 (1-47)||(44523516-44523562)
chr1 (1-49)||(7371547-7371595)
chr1 (1-49)||(31058435-31058483)
chr1 (2-49)||(24905167-24905214)
chr1 (2-49)||(28011718-28011765)
chr1 (1-46)||(7371293-7371338)
chr1 (1-46)||(35040992-35041037)
chr1 (1-49)||(12906037-12906085)
chr1 (5-49)||(25884701-25884745)
chr1 (5-49)||(28324805-28324849)
chr1 (2-42)||(31514667-31514707)
chr1 (2-46)||(35038458-35038502)
[»] chr7 (25 HSPs)
chr7 (1-50)||(25453127-25453176)
chr7 (1-49)||(32934726-32934774)
chr7 (1-49)||(42617911-42617959)
chr7 (1-49)||(43266266-43266314)
chr7 (1-49)||(43266644-43266692)
chr7 (1-46)||(42618289-42618334)
chr7 (1-46)||(46204424-46204469)
chr7 (1-49)||(10600026-10600074)
chr7 (1-49)||(22081560-22081608)
chr7 (1-49)||(23058807-23058855)
chr7 (1-49)||(27138319-27138367)
chr7 (1-49)||(32068474-32068522)
chr7 (1-46)||(10600327-10600372)
chr7 (1-46)||(25628481-25628526)
chr7 (1-46)||(28890582-28890627)
chr7 (1-46)||(32068099-32068144)
chr7 (1-49)||(22081937-22081985)
chr7 (1-49)||(23058429-23058477)
chr7 (1-49)||(33828352-33828400)
chr7 (2-49)||(32680595-32680642)
chr7 (1-47)||(25628856-25628902)
chr7 (1-46)||(32934351-32934396)
chr7 (2-49)||(32680945-32680992)
chr7 (1-46)||(25453506-25453551)
chr7 (1-46)||(39274873-39274918)
[»] chr2 (13 HSPs)
chr2 (1-46)||(8342557-8342602)
chr2 (1-49)||(8710846-8710894)
chr2 (1-49)||(28226122-28226170)
chr2 (1-48)||(41588436-41588483)
chr2 (1-49)||(15604339-15604387)
chr2 (1-48)||(11830365-11830412)
chr2 (1-46)||(8342190-8342235)
chr2 (2-46)||(6573050-6573094)
chr2 (2-49)||(6573543-6573590)
chr2 (2-49)||(41587235-41587282)
chr2 (2-49)||(14900496-14900543)
chr2 (2-49)||(33740053-33740100)
chr2 (4-46)||(15604720-15604762)
[»] scaffold0771 (2 HSPs)
scaffold0771 (1-49)||(1213-1261)
scaffold0771 (1-49)||(920-968)
[»] scaffold0006 (2 HSPs)
scaffold0006 (1-49)||(222167-222215)
scaffold0006 (1-46)||(221794-221839)
[»] chr8 (32 HSPs)
chr8 (1-49)||(41353951-41353999)
chr8 (3-49)||(6472395-6472441)
chr8 (1-47)||(8998067-8998113)
chr8 (1-47)||(44664886-44664932)
chr8 (1-46)||(8997859-8997904)
chr8 (1-46)||(41353577-41353622)
chr8 (1-49)||(234118-234166)
chr8 (1-49)||(710529-710577)
chr8 (1-49)||(747741-747789)
chr8 (1-49)||(871636-871684)
chr8 (1-49)||(7983428-7983476)
chr8 (1-49)||(15229931-15229979)
chr8 (1-49)||(35634477-35634525)
chr8 (1-49)||(44664508-44664556)
chr8 (3-46)||(6471693-6471736)
chr8 (1-46)||(10445713-10445758)
chr8 (1-46)||(37542227-37542272)
chr8 (1-46)||(42945492-42945537)
chr8 (1-49)||(15230309-15230357)
chr8 (1-49)||(25124941-25124989)
chr8 (2-46)||(37542604-37542648)
chr8 (2-49)||(11675044-11675091)
chr8 (2-49)||(23505052-23505099)
chr8 (1-47)||(21432695-21432741)
chr8 (3-49)||(23507807-23507853)
chr8 (1-46)||(25124566-25124611)
chr8 (1-46)||(38003784-38003829)
chr8 (2-46)||(36325584-36325628)
chr8 (2-49)||(11674695-11674742)
chr8 (2-49)||(36325234-36325281)
chr8 (1-46)||(27500092-27500137)
chr8 (1-49)||(30459371-30459419)
[»] chr5 (11 HSPs)
chr5 (1-49)||(17544426-17544474)
chr5 (1-49)||(8875449-8875497)
chr5 (1-49)||(20153293-20153341)
chr5 (1-49)||(33871716-33871764)
chr5 (1-43)||(8875645-8875687)
chr5 (1-49)||(3656796-3656844)
chr5 (1-49)||(20152781-20152829)
chr5 (1-49)||(33871339-33871387)
chr5 (2-49)||(6758215-6758262)
chr5 (1-49)||(21288035-21288083)
chr5 (2-46)||(41930866-41930910)
[»] chr4 (28 HSPs)
chr4 (1-49)||(3032582-3032630)
chr4 (1-49)||(22987229-22987277)
chr4 (1-49)||(27069288-27069336)
chr4 (1-49)||(52573606-52573654)
chr4 (1-49)||(54858560-54858608)
chr4 (1-49)||(54858938-54858986)
chr4 (1-47)||(45463075-45463121)
chr4 (1-46)||(11523952-11523997)
chr4 (1-46)||(22717942-22717987)
chr4 (1-46)||(39701287-39701332)
chr4 (1-49)||(10407889-10407937)
chr4 (1-49)||(10408267-10408315)
chr4 (1-49)||(16605602-16605650)
chr4 (5-49)||(27149377-27149421)
chr4 (1-49)||(50504203-50504251)
chr4 (1-49)||(52573228-52573276)
chr4 (1-46)||(45463451-45463496)
chr4 (1-49)||(27068910-27068958)
chr4 (1-49)||(51859784-51859832)
chr4 (2-49)||(22567136-22567183)
chr4 (3-49)||(50503825-50503871)
chr4 (1-46)||(5818153-5818198)
chr4 (2-50)||(9400518-9400566)
chr4 (1-49)||(27891584-27891632)
chr4 (2-49)||(4983076-4983123)
chr4 (1-38)||(22718317-22718354)
chr4 (1-38)||(22986862-22986899)
chr4 (2-46)||(39667155-39667199)
[»] chr3 (31 HSPs)
chr3 (1-49)||(10294567-10294615)
chr3 (1-49)||(13949073-13949121)
chr3 (1-49)||(32306424-32306472)
chr3 (1-49)||(37778651-37778699)
chr3 (1-49)||(40788798-40788846)
chr3 (1-47)||(33506180-33506226)
chr3 (1-46)||(32306802-32306847)
chr3 (1-46)||(33156374-33156419)
chr3 (1-49)||(3469200-3469248)
chr3 (1-49)||(3469578-3469626)
chr3 (1-49)||(13948780-13948828)
chr3 (1-45)||(29118916-29118960)
chr3 (1-49)||(33506328-33506376)
chr3 (1-49)||(52032517-52032565)
chr3 (1-47)||(11910701-11910747)
chr3 (1-47)||(29118529-29118575)
chr3 (1-47)||(29685943-29685989)
chr3 (1-47)||(29686318-29686364)
chr3 (1-46)||(3596112-3596157)
chr3 (1-46)||(41421975-41422020)
chr3 (1-46)||(52032141-52032186)
chr3 (2-46)||(10770841-10770885)
chr3 (1-49)||(42855685-42855733)
chr3 (1-49)||(47551493-47551541)
chr3 (2-49)||(36314298-36314345)
chr3 (1-49)||(10294937-10294985)
chr3 (2-46)||(10770493-10770537)
chr3 (2-49)||(36314648-36314695)
chr3 (2-49)||(48322727-48322774)
chr3 (1-35)||(35643865-35643899)
chr3 (1-46)||(40788423-40788468)
[»] scaffold0388 (1 HSPs)
scaffold0388 (1-46)||(12617-12662)
[»] scaffold0328 (2 HSPs)
scaffold0328 (1-49)||(11518-11566)
scaffold0328 (1-46)||(11143-11188)
[»] scaffold0599 (1 HSPs)
scaffold0599 (1-47)||(2395-2441)
[»] scaffold0205 (1 HSPs)
scaffold0205 (2-49)||(21009-21056)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-47)||(12158-12204)


Alignment Details
Target: chr6 (Bit Score: 49; Significance: 6e-19; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10781195 - 10781147
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10781195 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 10781147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6517551 - 6517503
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6517551 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 6517503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7905291 - 7905244
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagc 48  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  7905291 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagc 7905244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7160852 - 7160807
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  7160852 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 7160807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 22502822 - 22502777
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  22502822 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 22502777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21836408 - 21836456
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  21836408 taatttttaaatgacgcctaattgcaaggatgaaacacatcattaagcc 21836456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22503152 - 22503200
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  22503152 taatttttaaatgacgcctaattgcaaggacgaaacacattattaagcc 22503200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31406926 - 31406878
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  31406926 taatttttaaatgacgcctaattgcaaggacgaaacacattattaagcc 31406878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 32593538 - 32593490
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  32593538 taatttttaaatgacgcctaattgaaaggactaaacacatcattaagcc 32593490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21836080 - 21836035
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||    
T  21836080 taatttttaaatgacgcctaattgcaagaacgaaacacatcattaa 21836035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31407256 - 31407301
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||    
T  31407256 taatttttaaatgacgcctaattgcaaggacgaagcacatcattaa 31407301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7161182 - 7161230
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| |||||||||| | |||||||||||    
T  7161182 taatttttaaatgacgcctaattgcaaggacgaaatatatcattaagcc 7161230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 14196662 - 14196615
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||    
T  14196662 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 14196615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 15913927 - 15913974
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||| | |||||| ||||||||||||||||||||||||    
T  15913927 aatttttaaatgacccttaattgcaaggacgaaacacatcattaagcc 15913974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 15913596 - 15913551
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||    
T  15913596 taatttttaaatgacgcctaattgcaataacgaaacacatcattaa 15913551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 7905622 - 7905666
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    ||||| |||||||| |||||||| |||||||||||||||||||||    
T  7905622 aatttataaatgacacctaattgcaaggacgaaacacatcattaa 7905666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 14196965 - 14197011
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagc 48  Q
    |||||||||| |||||||||||| |||||| || |||||||||||||    
T  14196965 aatttttaaacgacgcctaattgcaaggactaatcacatcattaagc 14197011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 25486000 - 25485956
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||| |||||| |||||| || |||||||||||    
T  25486000 aatttttaaatgacgcttaattgcaaggactaatcacatcattaa 25485956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20760883 - 20760931
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20760883 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 20760931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8898565 - 8898517
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8898565 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 8898517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17189002 - 17188954
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17189002 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 17188954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25885371 - 25885419
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25885371 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 25885419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30326544 - 30326496
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30326544 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 30326496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37929466 - 37929418
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37929466 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 37929418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40714492 - 40714444
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40714492 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 40714444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40714821 - 40714869
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40714821 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 40714869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 45750220 - 45750268
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45750220 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 45750268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 49955725 - 49955773
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49955725 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 49955773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8898895 - 8898943
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  8898895 taatttttaaatgacgcctaattacaaggacgaaacacatcattaagcc 8898943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17189229 - 17189277
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  17189229 taatttttaaatgacgtctaattgcaaggacgaaacacatcattaagcc 17189277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28325181 - 28325229
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||    
T  28325181 taatttttaaatgacgcctaattgcaaggccgaaacacatcattaagcc 28325229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31050998 - 31050950
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  31050998 taatttttaaataacgcctaattgcaaggacgaaacacatcattaagcc 31050950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32558485 - 32558533
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||    
T  32558485 taatttttaaatgacgtctaattgtaaggacaaaacacatcattaagcc 32558533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 45749890 - 45749842
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  45749890 taatttttaaatgacgcctaattgcaaggatgaaacacatcattaagcc 45749842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 49955395 - 49955347
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  49955395 taatttttaaatgatgcctaattgcaaggacgaaacacatcattaagcc 49955347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44523516 - 44523562
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaag 47  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  44523516 taatttttaaatgaggcctaattgcaaggacgaaacacatcattaag 44523562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7371547 - 7371595
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||| ||||||| |||||||||||||||| |||||||    
T  7371547 taatttttaaatgacgtctaattgcaaggacgaaacacatcgttaagcc 7371595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 31058435 - 31058483
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||||    
T  31058435 taatttttaaatgatgtctaattgcaaggacgaaacacatcattaagcc 31058483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 24905214 - 24905167
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||    
T  24905214 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 24905167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 28011718 - 28011765
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||    
T  28011718 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 28011765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7371338 - 7371293
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||||    
T  7371338 taatttttaaatgacacctaattgcaaggacgaaacatatcattaa 7371293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35040992 - 35041037
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||    
T  35040992 taatttttaaatgacggctaattacaaggacgaaacacatcattaa 35041037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12906037 - 12906085
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||| | | ||||| ||||||||||||||||||||||||    
T  12906037 taatttttaaatgatgtcaaattgcaaggacgaaacacatcattaagcc 12906085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 25884745 - 25884701
Alignment:
Q  5 ttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||| ||||||| || |||||||||||||||||||||    
T  25884745 ttttaaatgacgtctaattgcaatgacgaaacacatcattaagcc 25884701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 28324849 - 28324805
Alignment:
Q  5 ttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||||    
T  28324849 ttttaaacgacgcctaattgcaaggaggaaacacatcattaagcc 28324805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 31514667 - 31514707
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatca 42  Q
    |||||||||||| ||||||||||||||| | ||||||||||    
T  31514667 aatttttaaatgccgcctaattgtaagggctaaacacatca 31514707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 35038502 - 35038458
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||| | |||||| ||||||||||||||| |||||    
T  35038502 aatttttaaatgacccttaattgcaaggacgaaacacattattaa 35038458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25453176 - 25453127
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagccg 50  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25453176 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagccg 25453127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32934726 - 32934774
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32934726 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 32934774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42617959 - 42617911
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42617959 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 42617911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43266314 - 43266266
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43266314 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 43266266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43266644 - 43266692
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43266644 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 43266692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42618289 - 42618334
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  42618289 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 42618334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 46204469 - 46204424
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  46204469 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 46204424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10600074 - 10600026
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  10600074 taatttttaaatgacgcctaattgcaaggacgaaacacatcatttagcc 10600026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22081608 - 22081560
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  22081608 taatttttaaatgacgcataattgcaaggacgaaacacatcattaagcc 22081560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23058807 - 23058855
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  23058807 taatttttaaatgacgccgaattgcaaggacgaaacacatcattaagcc 23058855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27138319 - 27138367
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  27138319 taatttttaaatgacgcctgattgaaaggacgaaacacatcattaagcc 27138367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32068474 - 32068522
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  32068474 taatttttaaatgactcctaattgcaaggacgaaacacatcattaagcc 32068522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10600327 - 10600372
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| || ||||||||||||||||||    
T  10600327 taatttttaaatgacgcctaattgcaatgacgaaacacatcattaa 10600372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25628526 - 25628481
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||    
T  25628526 taatttttaaatgacgcctaattgcaagcacgaaacacatcattaa 25628481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28890627 - 28890582
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  28890627 taatttttaaatgacgtctaattgcaaggacgaaacacatcattaa 28890582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32068144 - 32068099
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  32068144 taatttttaaatgacgtctaattgcaaggacgaaacacatcattaa 32068099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22081937 - 22081985
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||| |||||| |||||||||||| |||||||||||    
T  22081937 taatttttaaatgacgcataattgcaaggacgaaacaaatcattaagcc 22081985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23058477 - 23058429
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||||||    
T  23058477 taatttttaaatgactcttaattgcaaggacgaaacacatcattaagcc 23058429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33828352 - 33828400
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  33828352 taatttttaaatgacacctaattgcaaggacgaaactcatcattaagcc 33828400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 32680642 - 32680595
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||    
T  32680642 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 32680595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25628856 - 25628902
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaag 47  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||||    
T  25628856 taatttttaaatgacgcataattgcaaggacgagacacatcattaag 25628902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32934396 - 32934351
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||||    
T  32934396 taatttttaaatgacacctaattgcaaggatgaaacacatcattaa 32934351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 32680945 - 32680992
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||| |||||||||||| |||||| || ||||||||||||||    
T  32680945 aatttttaaacgacgcctaattgcaaggactaatcacatcattaagcc 32680992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25453506 - 25453551
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    ||||||||||||||||| |||||  || ||||||||||||||||||    
T  25453506 taatttttaaatgacgcttaattacaaagacgaaacacatcattaa 25453551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 39274918 - 39274873
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||| ||||| ||||| |||||| ||||||||||||||    
T  39274918 taatttttaaataacgccaaattgcaaggacaaaacacatcattaa 39274873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8342557 - 8342602
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  8342557 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 8342602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8710846 - 8710894
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8710846 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 8710894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28226122 - 28226170
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28226122 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 28226170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41588436 - 41588483
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagc 48  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  41588436 taatttttaaatgacgcctaattgtaaggacgaaacacattattaagc 41588483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15604387 - 15604339
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  15604387 taatttttaaatgacacctaattgcaaggacgaaacacatcattaagcc 15604339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 11830412 - 11830365
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagc 48  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  11830412 taatttttaaatgacgtctaattgcaaggacgaaacacatcattaagc 11830365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8342235 - 8342190
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  8342235 taatttttaaatgacgcttaattgcaaggacgaaacacatcattaa 8342190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 6573094 - 6573050
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    ||||||||||||||||||||||| | |||||||||||||||||||    
T  6573094 aatttttaaatgacgcctaattgcagggacgaaacacatcattaa 6573050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 6573590 - 6573543
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  6573590 aatttttaaatgacgcctaattggagggatgaaacacatcattaagcc 6573543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 41587282 - 41587235
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||| | |||||| ||||||||||||||||||||||||    
T  41587282 aatttttaaatgactcttaattgcaaggacgaaacacatcattaagcc 41587235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 14900543 - 14900496
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||| ||||||||||||||| |||||| || ||||||||||||||    
T  14900543 aatttttgaatgacgcctaattgcaaggactaatcacatcattaagcc 14900496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 33740053 - 33740100
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||| ||||||||||||||| | |||||||||| ||||||    
T  33740053 aatttttaaatgccgcctaattgtaagggctaaacacatcaataagcc 33740100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 15604720 - 15604762
Alignment:
Q  4 tttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||| |||||||| |||||| ||||||||||||||    
T  15604720 tttttaaatgacacctaattgcaaggacaaaacacatcattaa 15604762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1213 - 1261
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1213 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 1261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 968 - 920
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  968 taatttttaaatgatgcctaattgcaaggacgaaacacatcattaagcc 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 222167 - 222215
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  222167 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 222215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 221839 - 221794
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||    
T  221839 taatttttaaatgacgcctaattgcaagaacgaaacacatcattaa 221794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 41353951 - 41353999
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41353951 taatttttaaatgacgcctaattataaggacgaaacacatcattaagcc 41353999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 6472395 - 6472441
Alignment:
Q  3 atttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  6472395 atttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 6472441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8998067 - 8998113
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaag 47  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  8998067 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaag 8998113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 44664886 - 44664932
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaag 47  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  44664886 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaag 44664932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8997904 - 8997859
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  8997904 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 8997859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41353622 - 41353577
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  41353622 taatttttaaatgacgcctaattgtaaggacgaaacatatcattaa 41353577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 234118 - 234166
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  234118 taatttttaaatgatgcctaattgcaaggacgaaacacatcattaagcc 234166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 710529 - 710577
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  710529 taatttttaaatgatgcctaattgcaaggacgaaacacatcattaagcc 710577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 747741 - 747789
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  747741 taatttttaaatgatgcctaattgcaaggacgaaacacatcattaagcc 747789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 871636 - 871684
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  871636 taatttttaaatgatgcctaattgcaaggacgaaacacatcattaagcc 871684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 7983476 - 7983428
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  7983476 taatttttaaatgacgcctaattgcaaggacgaaacacataattaagcc 7983428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15229979 - 15229931
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  15229979 taatttttaaatgacgcctaattgcaaggacaaaacacatcattaagcc 15229931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35634477 - 35634525
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  35634477 taatttttaaatgacgcttaattgcaaggacgaaacacatcattaagcc 35634525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44664556 - 44664508
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  44664556 taatttttaaatgacgcctaattgcaaggacgaaacacataattaagcc 44664508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 6471736 - 6471693
Alignment:
Q  3 atttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  6471736 atttttaaatgacgcctaattgcaaggacgaaacacatcattaa 6471693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10445713 - 10445758
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||    
T  10445713 taatttttaaatgacacctaattgcaaggacgaaacacatcattaa 10445758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37542272 - 37542227
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| || ||||||||||||||||||    
T  37542272 taatttttaaatgacgcctaattgcaaagacgaaacacatcattaa 37542227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42945492 - 42945537
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||    
T  42945492 taatttttaaatgacgcctaattgcaagaacgaaacacatcattaa 42945537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15230309 - 15230357
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||||    
T  15230309 taatttttaaatgacacctaattgcaaggacaaaacacatcattaagcc 15230357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 25124941 - 25124989
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||||||    
T  25124941 taatttttaaatgacacctaattgcaaggacgaaacacatgattaagcc 25124989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 37542604 - 37542648
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||    
T  37542604 aatttttaaatgacgcctaattgtaaggatgaaacacattattaa 37542648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 11675044 - 11675091
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||    
T  11675044 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 11675091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 23505099 - 23505052
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||    
T  23505099 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 23505052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21432741 - 21432695
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaag 47  Q
    ||||||||| |||||| ||||||| ||||||||||||||||||||||    
T  21432741 taatttttatatgacgtctaattgcaaggacgaaacacatcattaag 21432695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 23507807 - 23507853
Alignment:
Q  3 atttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||| |||||| || ||||||||||||||    
T  23507807 atttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 23507853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25124611 - 25124566
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||    
T  25124611 taatttttaaatgacgcctaattgcaagaacgaaatacatcattaa 25124566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38003784 - 38003829
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||    
T  38003784 taatttttaaattacgactaattgcaaggacgaaacacatcattaa 38003829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 36325584 - 36325628
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    ||||||||||||||||||||||| |||||| || |||||||||||    
T  36325584 aatttttaaatgacgcctaattgcaaggactaatcacatcattaa 36325628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 11674742 - 11674695
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||| |||||||||||| |||||| || ||||||||||||||    
T  11674742 aatttttaaacgacgcctaattgcaaggactaatcacatcattaagcc 11674695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 36325281 - 36325234
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||| ||| ||||||||||||||| || ||||||||||||||    
T  36325281 aatttttaaacgacccctaattgtaaggactaatcacatcattaagcc 36325234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27500137 - 27500092
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    ||||||||||||||||  |||||| |||||||||||| ||||||||    
T  27500137 taatttttaaatgacgtttaattgcaaggacgaaacatatcattaa 27500092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30459419 - 30459371
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||| |||||||||||||||||| |||| ||||  |||||||    
T  30459419 taatttttaaacgacgcctaattgtaaggatgaaatacatatttaagcc 30459371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17544426 - 17544474
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17544426 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 17544474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8875497 - 8875449
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  8875497 taatttttaaatgacgcttaattgcaaggacgaaacacatcattaagcc 8875449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20153293 - 20153341
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  20153293 taatttttaaatgacacctaattgcaaggacgaaacacatcattaagcc 20153341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33871716 - 33871764
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  33871716 taatttttaaatggcgcctaattgcaaggacgaaacacatcattaagcc 33871764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8875645 - 8875687
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcat 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  8875645 taatttttaaatgacgcctaattgcaaggacgaaacacatcat 8875687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3656796 - 3656844
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||| ||||||| |||| |||||||||||||||||||    
T  3656796 taatttttaaatgacgtctaattgcaaggtcgaaacacatcattaagcc 3656844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20152829 - 20152781
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  20152829 taatttttaaatgacgcttaattgcatggacgaaacacatcattaagcc 20152781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33871387 - 33871339
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||| | |||||| |||||| |||||||||||||||||    
T  33871387 taatttttaaatgacacttaattgcaaggacaaaacacatcattaagcc 33871339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 6758215 - 6758262
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||| |||||||||||| |||||| || ||||||||||||||    
T  6758215 aatttttaaacgacgcctaattgcaaggactaatcacatcattaagcc 6758262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21288035 - 21288083
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||| |||| ||||||  |||||| |||||||||||||||||    
T  21288035 taatttttaaacgacgtctaattacaaggacaaaacacatcattaagcc 21288083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 41930866 - 41930910
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    ||||||||||||||||||||||  |||||| || |||||||||||    
T  41930866 aatttttaaatgacgcctaattacaaggactaatcacatcattaa 41930910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3032630 - 3032582
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3032630 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 3032582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22987229 - 22987277
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  22987229 taatttttaaatgacgtctaattgtaaggacgaaacacatcattaagcc 22987277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27069288 - 27069336
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27069288 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 27069336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 52573606 - 52573654
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52573606 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 52573654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 54858608 - 54858560
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54858608 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 54858560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 54858938 - 54858986
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54858938 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 54858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 45463121 - 45463075
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaag 47  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  45463121 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaag 45463075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11523997 - 11523952
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  11523997 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 11523952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 22717987 - 22717942
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    
T  22717987 taatttttaaatgacgtctaattgtaaggacgaaacacatcattaa 22717942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39701287 - 39701332
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  39701287 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 39701332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10407937 - 10407889
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  10407937 taatttttaaatgactcctaattgcaaggacgaaacacatcattaagcc 10407889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10408267 - 10408315
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  10408267 taatttttaaatgacgcctaattgcaaggacgaaacacaacattaagcc 10408315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16605650 - 16605602
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  16605650 taatttttaaatgacacctaattgcaaggacgaaacacatcattaagcc 16605602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 27149377 - 27149421
Alignment:
Q  5 ttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  27149377 ttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 27149421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50504203 - 50504251
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  50504203 taatttttaaatgacgcctaattacaaggacgaaacacatcattaagcc 50504251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 52573276 - 52573228
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||    
T  52573276 taatttttaaatgacgcctaattgcaaagacgaaacacatcattaagcc 52573228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 45463451 - 45463496
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||    
T  45463451 taatttttaaatgacgcctaattgcaaggacgaaacatatcattaa 45463496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27068958 - 27068910
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||| ||||||||| |||||||||||||||| |||||||    
T  27068958 taatttttaaatgatgcctaattgcaaggacgaaacacatccttaagcc 27068910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 51859784 - 51859832
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  51859784 taatttttaaattacgtctaattgcaaggacgaaacacatcattaagcc 51859832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 22567136 - 22567183
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||    
T  22567136 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 22567183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 50503871 - 50503825
Alignment:
Q  3 atttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||| |||||||||  |||||||||||||||||||||||    
T  50503871 atttttaaatgatgcctaattgcgaggacgaaacacatcattaagcc 50503825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5818153 - 5818198
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||  || ||||||||||||||||||    
T  5818153 taatttttaaatgacgcctaattacaaagacgaaacacatcattaa 5818198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 9400566 - 9400518
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagccg 50  Q
    |||||||||||||| |||||||| |||||| || |||||||||||||||    
T  9400566 aatttttaaatgacacctaattgcaaggactaatcacatcattaagccg 9400518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27891632 - 27891584
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||| | | ||||||| ||||||||||||||||||||||||    
T  27891632 taatttttaaataatgtctaattgcaaggacgaaacacatcattaagcc 27891584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 4983076 - 4983123
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||| |||||||||||| |||||| || ||||||||||||||    
T  4983076 aatttttaaacgacgcctaattgcaaggactaatcacatcattaagcc 4983123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 22718317 - 22718354
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacac 38  Q
    |||||||||||||||||||||||  |||||||||||||    
T  22718317 taatttttaaatgacgcctaattaaaaggacgaaacac 22718354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22986899 - 22986862
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacac 38  Q
    |||||||||||||||||||||||  |||||||||||||    
T  22986899 taatttttaaatgacgcctaattaaaaggacgaaacac 22986862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 39667155 - 39667199
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||| | |||||  |||||||||||||||||||||    
T  39667155 aatttttaaatgacccgtaattacaaggacgaaacacatcattaa 39667199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10294615 - 10294567
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10294615 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 10294567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13949073 - 13949121
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13949073 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 13949121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 32306472 - 32306424
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32306472 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 32306424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37778651 - 37778699
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37778651 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 37778699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40788798 - 40788846
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40788798 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaagcc 40788846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33506226 - 33506180
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaag 47  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  33506226 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaag 33506180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32306802 - 32306847
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  32306802 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 32306847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33156374 - 33156419
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  33156374 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 33156419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3469248 - 3469200
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||    
T  3469248 taatttttaaatgacgcctaattgcaaagacgaaacacatcattaagcc 3469200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3469578 - 3469626
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||    
T  3469578 taatttttaaatgacgcctaattgcaaggacgaaacagatcattaagcc 3469626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13948828 - 13948780
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  13948828 taatttttaaatgatgcctaattgcaaggacgaaacacatcattaagcc 13948780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29118916 - 29118960
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcatta 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  29118916 taatttttaaatgacgcctaattgcaaggacgaaacacatcatta 29118960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33506328 - 33506376
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  33506328 taatttttaaataacgcctaattgaaaggacgaaacacatcattaagcc 33506376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 52032517 - 52032565
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  52032517 taatttttaaatgacgtctaattgcaaggacgaaacacatcattaagcc 52032565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11910747 - 11910701
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaag 47  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  11910747 taatttttaaatgacgtctaattgcaaggacgaaacacatcattaag 11910701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29118575 - 29118529
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaag 47  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  29118575 taatttttaaatgacgcataattgcaaggacgaaacacatcattaag 29118529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29685989 - 29685943
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaag 47  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||    
T  29685989 taatttttaaatgacgcctaattgcaaggacgaaatacatcattaag 29685943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29686318 - 29686364
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaag 47  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||    
T  29686318 taattttaaaatgacgcctaattgcaaggacgaaacacatcattaag 29686364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3596157 - 3596112
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||    
T  3596157 taatttttaaatcacgcctaattgcaaggacgaaacacatcattaa 3596112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41422020 - 41421975
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||    
T  41422020 taatttttaactgacgcctaattgcaaggacgaaacacatcattaa 41421975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 52032186 - 52032141
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||    
T  52032186 taatttttaaatgacgcctaattgcaaggacaaaacacatcattaa 52032141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 10770841 - 10770885
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||||||||| || |||||||||||    
T  10770841 aatttttaaatgacgcctaattgtaaggactaatcacatcattaa 10770885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42855685 - 42855733
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| |||| | |||||||||||||||||    
T  42855685 taatttttaaatgacgcctaattgcaagggctaaacacatcattaagcc 42855733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 47551541 - 47551493
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||||    
T  47551541 taatttttaaatgacatctaattgcaaggacgaaacacatcattaagcc 47551493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 36314345 - 36314298
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||    
T  36314345 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 36314298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10294937 - 10294985
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||| ||| || |||| ||||||||||||||||||||||||    
T  10294937 taatttttaaattacgtctgattgcaaggacgaaacacatcattaagcc 10294985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 10770537 - 10770493
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    ||||||||||||||||||||||| |||||| || |||||||||||    
T  10770537 aatttttaaatgacgcctaattgcaaggactaatcacatcattaa 10770493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 36314648 - 36314695
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||| |||||||||||| |||||| || ||||||||||||||    
T  36314648 aatttttaaacgacgcctaattgcaaggactaatcacatcattaagcc 36314695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 48322727 - 48322774
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||| |||||||||||| |||||| || ||||||||||||||    
T  48322727 aatttttaaacgacgcctaattgcaaggactaatcacatcattaagcc 48322774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 35643899 - 35643865
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaa 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  35643899 taatttttaaatgacgcctaattgcaaggacgaaa 35643865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40788468 - 40788423
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||| |||| |||||| ||||| |||||||||||||||    
T  40788468 taatttttaaataacgcttaattgcaaggaagaaacacatcattaa 40788423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 12617 - 12662
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  12617 taatttttaaatgacgcctaattgcaaggacgaaacacatcattaa 12662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11518 - 11566
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  11518 taatttttaaatgacgcctaattgcaaggatgaaacacatcattaagcc 11566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11188 - 11143
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaa 46  Q
    ||||||||| |||||| ||||||| || ||||||||||||||||||    
T  11188 taatttttagatgacgactaattgcaacgacgaaacacatcattaa 11143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2441 - 2395
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaag 47  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||    
T  2441 taatttttaaatgacgtctaattgcaaggacgaaacacatcattaag 2395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 21056 - 21009
Alignment:
Q  2 aatttttaaatgacgcctaattgtaaggacgaaacacatcattaagcc 49  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||||    
T  21056 aatttttaaatgacgcctaattgcaaggactaatcacatcattaagcc 21009  T

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Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12158 - 12204
Alignment:
Q  1 taatttttaaatgacgcctaattgtaaggacgaaacacatcattaag 47  Q
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T  12158 taatttttaaatgacgtttaattgcaaggacgaaacacatcattaag 12204  T

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