View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17924_low_32 (Length: 234)
Name: NF17924_low_32
Description: NF17924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17924_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 5926908 - 5927041
Alignment:
| Q |
21 |
aaacatattaataatgtttatgaaggcgatgtggatacatgttgtttatccgagtggtaaggaattcatataccctaagcacatcttaaaaataatagat |
120 |
Q |
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| T |
5926908 |
aaacatattaataatgtttatgaaggcgatgtggatacatgttgtttatccgagtcgtaaggaattcatataccctaagcacatcttaaaaataatagat |
5927007 |
T |
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| Q |
121 |
actccttaaataaatggttatagatttgattcat |
154 |
Q |
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| T |
5927008 |
acaccttaaataaatggttatagatttgattcat |
5927041 |
T |
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