View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17924_low_5 (Length: 551)
Name: NF17924_low_5
Description: NF17924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17924_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 492; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 492; E-Value: 0
Query Start/End: Original strand, 7 - 535
Target Start/End: Original strand, 21829482 - 21830010
Alignment:
| Q |
7 |
tgaaaagaacaataaggtttctcagagaaagtaaaaacattttcaggcacatgaacatattcgggaatagctgctgaccctcctcctcttttacttccaa |
106 |
Q |
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| T |
21829482 |
tgaaaagaacaataaggtttctcagagaaagtaaaaacattttcaggcacatgaacatattcaggaatagctgctgaccctcctcctcttttacttccaa |
21829581 |
T |
|
| Q |
107 |
atttccctttcttcttaaccaaactatgagtatcaacannnnnnnctctttccatagaagaaagcaaagaaggatgaataggagtaagattcccttcctc |
206 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21829582 |
atttccctttcttcttaaccaaactatgagtatcaacatttttttctctttccattgaagaaagcaaagaaggatgaataggagtaagattcccttcctc |
21829681 |
T |
|
| Q |
207 |
acctctcatactcataacctcacattcttgaacttcccaaatatgtatcactttatcctcaccaaccgtagccaaaaaccttccatccaaactaaacttc |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |
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| T |
21829682 |
acctctcatactcataacctcacattcttgaacttcccaaatatgtatcactttatcctcaccagcagtagccaaaaaccttccatccaaactaaacttc |
21829781 |
T |
|
| Q |
307 |
atagtccaaatacacccttcatgtgcttgaaattcttgacataaatgcaaagctgaaagctctttttgtgatttcccactttgcctaaccttaacccatt |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21829782 |
atagtccaaatacacccttcatgtgcttgaaattcttgacataaatgcaaagctgaaagctctttttgtgatttcccactttgcctaaccttaacccatt |
21829881 |
T |
|
| Q |
407 |
tattcttcccttgagttttattttgatcaacaacttgtggtacaacaacttctctttcacgttcaccaacaattccacttgctacacctttaatattctt |
506 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21829882 |
tattcttcccttgagttttattttgatcaacaacttgtggtacaacaacttctctttcacgttcaccaacaattccacttgctacacctttaatattctt |
21829981 |
T |
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| Q |
507 |
caacaatgaagcacctcttcttttactta |
535 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
21829982 |
caacaatgaagcacctcttcttttactta |
21830010 |
T |
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