View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17927_high_13 (Length: 329)

Name: NF17927_high_13
Description: NF17927
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17927_high_13
NF17927_high_13
[»] chr4 (6 HSPs)
chr4 (49-290)||(4332480-4332721)
chr4 (1-65)||(4350272-4350336)
chr4 (14-279)||(4323828-4324093)
chr4 (51-285)||(4356588-4356822)
chr4 (245-279)||(6592337-6592371)
chr4 (145-269)||(4137360-4137484)
[»] chr6 (14 HSPs)
chr6 (91-277)||(5358205-5358391)
chr6 (22-277)||(5422050-5422305)
chr6 (71-278)||(5173989-5174196)
chr6 (148-277)||(5070545-5070674)
chr6 (151-278)||(5092784-5092911)
chr6 (151-278)||(5160629-5160756)
chr6 (148-278)||(5272856-5272986)
chr6 (148-277)||(5137728-5137857)
chr6 (148-277)||(5149830-5149959)
chr6 (19-277)||(5692922-5693180)
chr6 (148-239)||(5366391-5366482)
chr6 (151-277)||(5340401-5340527)
chr6 (220-285)||(5077283-5077348)
chr6 (156-277)||(5107916-5108037)
[»] chr3 (1 HSPs)
chr3 (172-277)||(48016274-48016379)
[»] chr8 (2 HSPs)
chr8 (239-275)||(25951828-25951864)
chr8 (239-275)||(25961079-25961115)
[»] chr7 (1 HSPs)
chr7 (202-278)||(34719945-34720021)


Alignment Details
Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 49 - 290
Target Start/End: Complemental strand, 4332721 - 4332480
Alignment:
Q  49 atcaactctcgaagacaccatggtgaatcagcgtagttcttggagaagacaataacagaaatttgagattctttaatctcttgtattagcgatgacgaga 148  Q
    ||||||||| ||||||||||| | |||||||||||||| ||||||||||||| ||||||||||   || || |  ||  |||||| ||| | |   ||||    
T  4332721 atcaactcttgaagacaccattgcgaatcagcgtagtttttggagaagacaacaacagaaattctcgactcctggattgcttgtagtagtgttttagaga 4332622  T
Q  149 tgtgatctcctctttgaagtgattgatcgtccttaaagacgataattccggagttttgaagggaagcatagagatgagaagtgaaggatgcgcgagtgtc 248  Q
    || ||| ||| |||||||| || ||||||||||| || ||||||||||| ||| ||||||| || | | ||||||| |||||||| ||||||||||||||    
T  4332621 tgcgatgtcccctttgaagggaatgatcgtccttgaaaacgataattccagagctttgaagagatgtagagagatgtgaagtgaatgatgcgcgagtgtc 4332522  T
Q  249 ttctcctcggaaactcaagaacacatcataccttcttctact 290  Q
    ||| ||||  ||||||||||||||||| ||| ||||| ||||    
T  4332521 ttcgcctctaaaactcaagaacacatcgtactttcttatact 4332480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4350336 - 4350272
Alignment:
Q  1 acgggaagaaccgcctgacctatggttctgtgacactccattatattaatcaactctcgaagaca 65  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4350336 acgggaagaaccgcctgacctatggttatgtgacactccattatattaatcaactctcgaagaca 4350272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 279
Target Start/End: Original strand, 4323828 - 4324093
Alignment:
Q  14 cctgacctatggttctgtgacactccattatattaatcaactctcgaagacaccatggtgaatcagcgtagttcttggagaagacaataacagaaatttg 113  Q
    |||| ||| |||||||||||| | ||||||| |    ||||||| ||||||||||    ||||| |||||||| || |||||||| |||||||||||||     
T  4323828 cctggcctgtggttctgtgacgcaccattatttgccacaactcttgaagacaccacttggaatcggcgtagttttttgagaagactataacagaaatttt 4323927  T
Q  114 agattctttaatctcttgtattagcgatgacgagatgtgatctcctctttgaagtgattgatcgtccttaaagacgataattccggagttttgaagggaa 213  Q
    |||   || |||  | || | ||||||||  || |||||||||||||||||||| || ||||| ||||| || | ||  ||||||| ||| ||||| ||     
T  4323928 agaagattcaattgcgtgaactagcgatggggatatgtgatctcctctttgaagcgactgatcatccttgaaaatgaggattccggcgttctgaagagat 4324027  T
Q  214 gcatagagatgagaagtgaaggatgcgcgagtgtcttctcctcggaaactcaagaacacatcatac 279  Q
    |    |||||| ||| |||| |||||||||||||||||||||||||||||||| ||||| ||||||    
T  4324028 gatgtgagatgtgaaatgaatgatgcgcgagtgtcttctcctcggaaactcaaaaacacgtcatac 4324093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 285
Target Start/End: Complemental strand, 4356822 - 4356588
Alignment:
Q  51 caactctcgaagacaccatggtgaatcagcgtagttcttggagaagacaataacagaaatttgagattctttaatctcttgtattagcgatgacgagatg 150  Q
    ||||||||| ||||||||||  |||||||| ||||| ||||||||||| ||||||| ||||  |||   ||  ||  |||| | || |||||  || |||    
T  4356822 caactctcgcagacaccatgacgaatcagcatagtttttggagaagacgataacagcaattctagagatttcgattgcttggagtaacgatgtggatatg 4356723  T
Q  151 tgatctcctctttgaagtgattgatcgtccttaaagacgataattccggagttttgaagggaagcatagagatgagaagtgaaggatgcgcgagtgtctt 250  Q
    || |||||||||| ||| || ||||||||||| ||||| |||||||||| ||||||||| ||   |   ||||| |||||||| ||||| | ||||||||    
T  4356722 tgctctcctctttcaagcgactgatcgtccttgaagacaataattccggcgttttgaagagagaaagtaagatgtgaagtgaatgatgctctagtgtctt 4356623  T
Q  251 ctcctcggaaactcaagaacacatcataccttctt 285  Q
    ||||||  |||||||| |||||||| ||| |||||    
T  4356622 ctcctctaaaactcaaaaacacatcgtactttctt 4356588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 279
Target Start/End: Original strand, 6592337 - 6592371
Alignment:
Q  245 tgtcttctcctcggaaactcaagaacacatcatac 279  Q
    |||||||||||| ||||||||||||||||||||||    
T  6592337 tgtcttctcctctgaaactcaagaacacatcatac 6592371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 269
Target Start/End: Original strand, 4137360 - 4137484
Alignment:
Q  145 gagatgtgatctcctctttgaagtgattgatcgtccttaaagacgataattccggagttttgaagggaagcatagagatgagaagtgaaggatgcgcgag 244  Q
    ||||||| ||||||||||||||| || ||||||||||| |||| | | | ||||| ||||  ||| ||||||||  | || |||||||| ||||  || |    
T  4137360 gagatgtaatctcctctttgaagcgagtgatcgtccttgaagaaggtgaatccggcgtttcaaagagaagcataaggctgtgaagtgaaagatgtacgtg 4137459  T
Q  245 tgtcttctcctcggaaactcaagaa 269  Q
    | ||||| |||| |||||| |||||    
T  4137460 tatcttcgcctctgaaacttaagaa 4137484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 91 - 277
Target Start/End: Original strand, 5358205 - 5358391
Alignment:
Q  91 gagaagacaataacagaaatttgagattctttaatctcttgtattagcgatgacgagatgtgatctcctctttgaagtgattgatcgtccttaaagacga 190  Q
    ||||| || ||||||||||||||||| |||| |||  |||| ||||| |||   || ||||||||||| ||||||||||| ||||| |||||||| |||     
T  5358205 gagaaaacgataacagaaatttgagaatcttgaattgcttgcattagtgattttgaaatgtgatctcccctttgaagtgaatgatcatccttaaaaacgt 5358304  T
Q  191 taattccggagttttgaagggaagcatagagatgagaagtgaaggatgcgcgagtgtcttctcctcggaaactcaagaacacatcat 277  Q
    | ||||||   ||||||||||||||||||||||| ||||||||| | ||  ||||||| ||||||| ||||||||||||||||||||    
T  5358305 tgattccgagattttgaagggaagcatagagatgtgaagtgaagcaagcatgagtgtcctctcctctgaaactcaagaacacatcat 5358391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 277
Target Start/End: Complemental strand, 5422305 - 5422050
Alignment:
Q  22 atggttctgtgacactccattatattaatcaactctcgaagacaccatggtgaatcagcgtagttcttggagaagacaataacagaaatttgagattctt 121  Q
    ||||||||||||||||||||||| || | ||||||   |||||||||| ||||||| ||||| ||  | ||||| || || | ||| ||| |||| | ||    
T  5422305 atggttctgtgacactccattattttcaacaactcatcaagacaccattgtgaatccgcgtaatttgttgagaaaactatgatagacattcgagactgtt 5422206  T
Q  122 taatctcttgtattagcgatgacgagatgtgatctcctctttgaagtgattgatcgtccttaaagacgataattccggagttttgaagggaagcatagag 221  Q
     |||  || |||  || ||||  || |||||||||||||||||||| || | ||||||| | || ||  |||||||| | |||||||| |||||||||||    
T  5422205 caattgctcgtaggagtgatgttgaaatgtgatctcctctttgaagcgaatcatcgtccctgaaaactttaattccgtaattttgaagagaagcatagag 5422106  T
Q  222 atgagaagtgaaggatgcgcgagtgtcttctcctcggaaactcaagaacacatcat 277  Q
    ||| |||||||| ||||| ||||| || |||||||  ||||| |||||||||||||    
T  5422105 atgtgaagtgaatgatgcacgagtatcctctcctctaaaacttaagaacacatcat 5422050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 71 - 278
Target Start/End: Complemental strand, 5174196 - 5173989
Alignment:
Q  71 gtgaatcagcgtagttcttggagaagacaataacagaaatttgagattctttaatctcttgtattagcgatgacgagatgtgatctcctctttgaagtga 170  Q
    ||||||| || ||||| || ||||| |  ||||||||||||||||| |||| |||  |||||| ||| |||   || |||||||||||||||||||||||    
T  5174196 gtgaatctgcatagttttttgagaaaatgataacagaaatttgagactcttcaattgcttgtagtagtgattttgaaatgtgatctcctctttgaagtga 5174097  T
Q  171 ttgatcgtccttaaagacgataattccggagttttgaagggaagcatagagatgagaagtgaaggatgcgcgagtgtcttctcctcggaaactcaagaac 270  Q
     | |||||||||||| ||| |||||||   ||||||||| ||||| || || || |||||||| || | ||| ||||| || |||| |||||| ||||||    
T  5174096 atcatcgtccttaaaaacgctaattccattgttttgaagagaagcgtataggtgtgaagtgaatgaagtgcgcgtgtcctcgcctctgaaacttaagaac 5173997  T
Q  271 acatcata 278  Q
    || |||||    
T  5173996 acttcata 5173989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 5070545 - 5070674
Alignment:
Q  148 atgtgatctcctctttgaagtgattgatcgtccttaaagacgataattccggagttttgaagggaagcatagagatgagaagtgaaggatgcgcgagtgt 247  Q
    |||||||||||||||||||| || |  || ||| |||| ||  | ||||| |||||| |||| |||||||||||||| |||||||| || | ||||||||    
T  5070545 atgtgatctcctctttgaagagaatcgtcttccctaaaaactttgattccagagtttcgaagagaagcatagagatgtgaagtgaatgaagagcgagtgt 5070644  T
Q  248 cttctcctcggaaactcaagaacacatcat 277  Q
    | ||||||| |||||| |||||||||||||    
T  5070645 cctctcctctgaaacttaagaacacatcat 5070674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 278
Target Start/End: Complemental strand, 5092911 - 5092784
Alignment:
Q  151 tgatctcctctttgaagtgattgatcgtccttaaagacgataattccggagttttgaagggaagcatagagatgagaagtgaaggatgcgcgagtgtctt 250  Q
    ||||||||||||||||| || | ||| ||| |||| ||  ||||||| |  |||||||| |||||||||||||| |||||||| ||||| ||||| ||||    
T  5092911 tgatctcctctttgaagcgaatcatcatccctaaaaacattaattccagcattttgaagtgaagcatagagatgtgaagtgaatgatgcacgagtatctt 5092812  T
Q  251 ctcctcggaaactcaagaacacatcata 278  Q
     |||||  ||||| |||||||| |||||    
T  5092811 ttcctctaaaacttaagaacacttcata 5092784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 278
Target Start/End: Original strand, 5160629 - 5160756
Alignment:
Q  151 tgatctcctctttgaagtgattgatcgtccttaaagacgataattccggagttttgaagggaagcatagagatgagaagtgaaggatgcgcgagtgtctt 250  Q
    ||||||||||||| ||| || | ||||||| |||| ||| ||| ||| | ||||||||| | |||||||||||| |||||||| ||||| ||||| ||||    
T  5160629 tgatctcctctttcaagagaatcatcgtccctaaaaacgttaagtccagcgttttgaagtgcagcatagagatgtgaagtgaatgatgcacgagtatctt 5160728  T
Q  251 ctcctcggaaactcaagaacacatcata 278  Q
     |||||  ||||| |||||||| |||||    
T  5160729 ttcctctaaaacttaagaacacttcata 5160756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 148 - 278
Target Start/End: Complemental strand, 5272986 - 5272856
Alignment:
Q  148 atgtgatctcctctttgaagtgattgatcgtccttaaagacgataattccggagttttgaagggaagcatagagatgagaagtgaaggatgcgcgagtgt 247  Q
    ||||||||||||||||||||| | | || ||||||||| ||| |||||||   ||||||||| ||||| || ||||| |||||||| || | ||| ||||    
T  5272986 atgtgatctcctctttgaagtaaatcattgtccttaaaaacgttaattccattgttttgaagagaagcgtatagatgtgaagtgaatgaagtgcgcgtgt 5272887  T
Q  248 cttctcctcggaaactcaagaacacatcata 278  Q
    | || |||| |||||| |||||||| |||||    
T  5272886 cctcgcctctgaaacttaagaacacttcata 5272856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 5137728 - 5137857
Alignment:
Q  148 atgtgatctcctctttgaagtgattgatcgtccttaaagacgataattccggagttttgaagggaagcatagagatgagaagtgaaggatgcgcgagtgt 247  Q
    ||||||||||||||||||||||| | ||||||| | |||||  ||||||| |  |||||||| || |  |  ||||| |||||||||||||  |||||||    
T  5137728 atgtgatctcctctttgaagtgaatcatcgtccatgaagactttaattccagccttttgaagagatgagtgaagatgtgaagtgaaggatgaacgagtgt 5137827  T
Q  248 cttctcctcggaaactcaagaacacatcat 277  Q
    |||| ||||| ||||||| |||||| ||||    
T  5137828 cttcccctcgaaaactcaggaacacttcat 5137857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 5149830 - 5149959
Alignment:
Q  148 atgtgatctcctctttgaagtgattgatcgtccttaaagacgataattccggagttttgaagggaagcatagagatgagaagtgaaggatgcgcgagtgt 247  Q
    |||||||||||||||| ||| || | ||| ||| |||| ||  ||||||| |  |||||||| |||||||||||||| |||||||| |||||||| || |    
T  5149830 atgtgatctcctcttttaagagaatcatcatccctaaaaactttaattccagcattttgaagagaagcatagagatgtgaagtgaatgatgcgcgcgtat 5149929  T
Q  248 cttctcctcggaaactcaagaacacatcat 277  Q
    |||| ||||  ||||| |||||||| ||||    
T  5149930 cttcccctctaaaacttaagaacacttcat 5149959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 277
Target Start/End: Original strand, 5692922 - 5693180
Alignment:
Q  19 cctatggttctgtgacactccattatattaatcaactctcgaagacaccatggtgaatcagcgtagttcttggagaagacaataacagaaatttgagatt 118  Q
    ||||| |||||| ||||||||||||| |||| ||||||    | |||||| |  ||||| || ||||| || ||||| || ||||||||||||  ||| |    
T  5692922 cctatagttctgcgacactccattattttaaccaactcattcaaacaccacgacgaatctgcatagttttttgagaaaactataacagaaattatagact 5693021  T
Q  119 ctttaatctcttgtattagcgatgacgagatgtgatctcctctttgaagtgattgatcgtccttaaagacgataattccggagttttgaagggaagcata 218  Q
    |||  ||  |||||| ||| ||||  |  ||||||||||||||| ||||||| | ||||||| |||| |||| || ||| |  ||| |||| ||||||||    
T  5693022 cttcgattgcttgtagtagtgatgttgcaatgtgatctcctcttggaagtgaatcatcgtccataaaaacgaaaactccagcatttagaagagaagcata 5693121  T
Q  219 gagatgagaagtgaaggatgcgcgagtgtcttctcctcggaaactcaagaacacatcat 277  Q
     ||||| |||  ||  || || || |||||||| ||||| ||||| |||||||| ||||    
T  5693122 tagatgtgaaacgattgaagcacgggtgtcttcccctcgaaaacttaagaacacgtcat 5693180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 5366482 - 5366391
Alignment:
Q  148 atgtgatctcctctttgaagtgattgatcgtccttaaagacgataattccggagttttgaagggaagcatagagatgagaagtgaaggatgc 239  Q
    |||||||||||||||||||| || |  |||||| | || ||   || ||||| ||||||||| |||||||||||||| |||||||| |||||    
T  5366482 atgtgatctcctctttgaagcgaatcgtcgtccctgaaaacacgaaatccggcgttttgaagagaagcatagagatgcgaagtgaaagatgc 5366391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 5340527 - 5340401
Alignment:
Q  151 tgatctcctctttgaagtgattgatcgtccttaaagacgataattccggagttttgaagggaagcatagagatgagaagtgaaggatgcgcgagtgtctt 250  Q
    ||||| ||||||||||| || | ||||||  |||| ||  ||||||| |  |||||||| | |||||||||||| |||||||||||| | |||||||| |    
T  5340527 tgatcacctctttgaagcgaatcatcgtctctaaaaacagtaattccagcattttgaagtgcagcatagagatgtgaagtgaaggatacacgagtgtcct 5340428  T
Q  251 ctcctcggaaactcaagaacacatcat 277  Q
      ||||  |||||||| ||||| ||||    
T  5340427 tccctctaaaactcaaaaacacttcat 5340401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 5077283 - 5077348
Alignment:
Q  220 agatgagaagtgaaggatgcgcgagtgtcttctcctcggaaactcaagaacacatcataccttctt 285  Q
    ||||| |||||||| ||| | ||||||||  |||||| |||||| |||||||||||||| ||||||    
T  5077283 agatgtgaagtgaaagattcacgagtgtccactcctctgaaacttaagaacacatcataacttctt 5077348  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 277
Target Start/End: Original strand, 5107916 - 5108037
Alignment:
Q  156 tcctctttgaagtgattgatcgtccttaaagacgataattccggagttttgaagggaagcatagagatgagaagtgaaggatgcgcgagtgtcttctcct 255  Q
    |||||||| ||| || | ||||||  |||| ||| | ||||| | ||| ||||| |||||||||||||| ||||||||||| || ||||| ||||  |||    
T  5107916 tcctcttttaagcgaatcatcgtctctaaaaacgttgattccagcgttctgaagagaagcatagagatgtgaagtgaaggaagcacgagtatctttgcct 5108015  T
Q  256 cggaaactcaagaacacatcat 277  Q
    | |||||| | |||||| ||||    
T  5108016 ctgaaacttaggaacacgtcat 5108037  T

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Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 48016274 - 48016379
Alignment:
Q  172 tgatcgtccttaaagacgataattccggagttttgaagggaagcatagagatgagaagtgaaggatgcgcgagtgtcttctcctcggaaactcaagaaca 271  Q
    ||||||||| || | ||| ||||||| ||||||||||| |||||||||||||| ||||| ||||| || || |||||||  ||||| ||||| | |||||    
T  48016274 tgatcgtccctataaacgttaattccagagttttgaagagaagcatagagatgcgaagtaaaggaagcacgtgtgtctttgcctcgaaaacttaggaaca 48016373  T
Q  272 catcat 277  Q
    | ||||    
T  48016374 cttcat 48016379  T

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Target: chr8 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 25951828 - 25951864
Alignment:
Q  239 cgcgagtgtcttctcctcggaaactcaagaacacatc 275  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  25951828 cgcgagtatcttctcctcggaaactcaaaaacacatc 25951864  T

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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 275
Target Start/End: Original strand, 25961079 - 25961115
Alignment:
Q  239 cgcgagtgtcttctcctcggaaactcaagaacacatc 275  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  25961079 cgcgagtatcttctcctcggaaactcaaaaacacatc 25961115  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 34719945 - 34720021
Alignment:
Q  202 ttttgaagggaagcatagagatgagaagtgaaggatgcgcgagtgtcttctcctcggaaactcaagaacacatcata 278  Q
    |||||||| || | ||||||||| ||| ||||   ||| ||||| ||||| |||| |||||||||||||||||||||    
T  34719945 ttttgaagagaggtatagagatgtgaaatgaatcttgcacgagtatcttcccctctgaaactcaagaacacatcata 34720021  T

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