View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1792_high_1 (Length: 329)

Name: NF1792_high_1
Description: NF1792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1792_high_1
NF1792_high_1
[»] chr5 (5 HSPs)
chr5 (1-312)||(38322626-38322934)
chr5 (1-139)||(38327798-38327936)
chr5 (194-306)||(38328010-38328123)
chr5 (1-49)||(8219759-8219807)
chr5 (1-48)||(31965399-31965446)
[»] chr8 (9 HSPs)
chr8 (1-123)||(2105889-2106012)
chr8 (1-102)||(12289419-12289523)
chr8 (1-135)||(11949342-11949477)
chr8 (1-52)||(939431-939482)
chr8 (1-48)||(12483099-12483146)
chr8 (1-48)||(12670512-12670559)
chr8 (1-48)||(12482779-12482826)
chr8 (11-48)||(11949186-11949223)
chr8 (60-104)||(11949122-11949166)
[»] chr3 (8 HSPs)
chr3 (1-135)||(3707954-3708086)
chr3 (1-135)||(3705445-3705580)
chr3 (1-119)||(3712995-3713115)
chr3 (1-117)||(3701695-3701813)
chr3 (1-83)||(3719514-3719598)
chr3 (1-48)||(26807450-26807497)
chr3 (1-48)||(32775295-32775342)
chr3 (1-48)||(32814981-32815028)
[»] chr1 (3 HSPs)
chr1 (1-119)||(43848979-43849095)
chr1 (1-50)||(27981074-27981123)
chr1 (1-48)||(30953118-30953165)
[»] chr2 (2 HSPs)
chr2 (1-53)||(4767488-4767540)
chr2 (1-51)||(38551353-38551403)
[»] chr4 (4 HSPs)
chr4 (1-51)||(30161859-30161909)
chr4 (1-51)||(51386261-51386311)
chr4 (1-49)||(26741371-26741419)
chr4 (1-48)||(19186016-19186063)
[»] chr7 (1 HSPs)
chr7 (1-48)||(25796197-25796244)
[»] chr6 (1 HSPs)
chr6 (1-48)||(21882932-21882979)


Alignment Details
Target: chr5 (Bit Score: 183; Significance: 6e-99; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 38322626 - 38322934
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttctgagagctgtgatgaaaatatttgtggtgttgggtaacatcacctttc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  38322626 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttctgagagctgtgatgaaaatagttgtggtgttgggta-catcacctttc 38322724  T
Q  101 ctgaaacacttgatgaaaaaatatacctctgagctttcannnnnnnnnnnnnnnnn--ggctcaatgcaagattctcagttaatgtcagcctcattatta 198  Q
    |||||||| | ||||||||||| ||| ||||||||||||                   ||||||||||||||||||||||||||||||||||||||||||    
T  38322725 ctgaaaca-tggatgaaaaaat-tacttctgagctttcattttttctcttttttttttggctcaatgcaagattctcagttaatgtcagcctcattatta 38322822  T
Q  199 ttagtagtcatttttatgtacataactaaa-gcttgctatctcccatgtttttgaatgaaagtgatttggagagagggagaaatcatttgtatttcaaat 297  Q
       ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||    
T  38322823 ---gtagtcatttttatgtacataactaaaagcttgctatctcccatgtttttgaatgaaaatgatttggagagagggagaactcatttttatttcaaat 38322919  T
Q  298 atcatggaagagtcc 312  Q
    |||||||||||||||    
T  38322920 atcatggaagagtcc 38322934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 38327798 - 38327936
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttctgagagctgtgatgaaaatatttgtggtgttgggtaacatcacctttc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  38327798 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttcttagagctgtgatgaaaatatttgtggtgttgggtaacatcaccttcc 38327897  T
Q  101 ctgaaacacttgatgaaaaaatatacctctgagctttca 139  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  38327898 ctgaaacactggatgaaaaaatatacctctgagctttca 38327936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 306
Target Start/End: Original strand, 38328010 - 38328123
Alignment:
Q  194 tattattagtagtcatttttatgtacat-aactaaagcttgctatc--tcccatgtttttgaatgaaagtgatttggagagagggagaaatcatttgtat 290  Q
    ||||||| |||||||||||||||||||| ||||| |||||||| ||  ||| ||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  38328010 tattattggtagtcatttttatgtacattaactatagcttgctctcgctccgatgtttttgaatgaaagagatttggaga--gggagaaatcatttgtat 38328107  T
Q  291 ttcaaatatcatggaa 306  Q
    |||||| || ||||||    
T  38328108 ttcaaacattatggaa 38328123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8219759 - 8219807
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcat 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  8219759 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcat 8219807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 31965446 - 31965399
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31965446 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 31965399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 2105889 - 2106012
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttct-gagagctgtgatgaaaatatttgtggtgttgggtaacatcaccttt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  | | ||| ||| ||||||||||||||||| |||| ||||||||||||| |    
T  2105889 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcacctgtggagggctatgatgaaaatatttgtgatgttcggtaacatcacctat 2105988  T
Q  100 cctgaaacacttgatgaaaaaata 123  Q
    |||||| || | ||||||||||||    
T  2105989 cctgaaccattggatgaaaaaata 2106012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12289419 - 12289523
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttc-tga--gagctgtgatgaaaatatttgtggtgttgggtaacatcacct 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||  ||||  |||||| ||| |||||||||||||||||||||||||    
T  12289419 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcaattcgtgaaggagcaatgatgataatgtttgtggtgttgggtaacatcacct 12289518  T
Q  98 ttcct 102  Q
     ||||    
T  12289519 atcct 12289523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 11949477 - 11949342
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttct-ga--gagctgtgatgaaaatatttgtggtgttgggtaacatcacct 97  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||||||||   || ||  ||||| |||||| ||| ||||||||||||||||||||| |||    
T  11949477 tagtaccctgccacgctacagacccgggttcaattcctggctggtgcaacccttgaatgagctatgatgataatgtttgtggtgttgggtaacatc-cct 11949379  T
Q  98 ttcctgaaacacttgatgaaaaaatatacctctgagct 135  Q
     |||||||| |||||||| | |||||||||||||||||    
T  11949378 atcctgaaaaacttgatg-ataaatatacctctgagct 11949342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 939482 - 939431
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttc 52  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  939482 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttc 939431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12483146 - 12483099
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12483146 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 12483099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12670559 - 12670512
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12670559 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 12670512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12482826 - 12482779
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 48  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  12482826 tagtaccctgccatggtacagacccgggttcaattcctggctggtgca 12482779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 11949223 - 11949186
Alignment:
Q  11 ccacggtacagacccgggttcgattcccggctggtgca 48  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  11949223 ccacggttcagacccgggttcaattcccggctggtgca 11949186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 11949166 - 11949122
Alignment:
Q  60 tgtgatgaaaatatttgtggtgttgggtaacatcacctttcctga 104  Q
    |||||||| |||  |||||||||||||||||||||||| ||||||    
T  11949166 tgtgatgataatgattgtggtgttgggtaacatcacctatcctga 11949122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 4e-32; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 3707954 - 3708086
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttctgagagctgtgatgaaaatatttgtggtgttgggtaacatcacctttc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |  || | ||||||||||||||||||||| |||| |||||||| |||||||    
T  3707954 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcaatattg-gggctgtgatgaaaatatttgtgatgtttggtaacattacctttc 3708052  T
Q  101 ctgaaacacttgatgaaaaaatatacctctgagct 135  Q
    ||||| ||   |||||||| | |||||||||||||    
T  3708053 ctgaatcatcggatgaaaata-atacctctgagct 3708086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 3705445 - 3705580
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttctga--gagctgtgatgaaaatatttgtggtgttgggtaacatcacctt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||||| |||||| ||||| |||| |||| ||||||||||| |     
T  3705445 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcaattttgagggagctatgatgataatatatgtgttgttcggtaacatcacttc 3705544  T
Q  99 tcctgaaacacttgatgaaaaaatatacctctgagct 135  Q
    |||||||||| | |||||||| | |||||||||||||    
T  3705545 tcctgaaacattggatgaaaata-atacctctgagct 3705580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 3712995 - 3713115
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttctga--gagctgtgatgaaaatatttgtggtgttgggtaacatcacctt 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |  ||  ||||| |||||| ||||| ||||||||| ||||||||||| |     
T  3712995 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatattcgagggagctatgatgataatatctgtggtgttcggtaacatcacttc 3713094  T
Q  99 tcctgaaacacttgatgaaaa 119  Q
    |||||||||| | ||||||||    
T  3713095 tcctgaaacattggatgaaaa 3713115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3701695 - 3701813
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgc--atttctgagagctgtgatgaaaatatttgtggtgttgggtaacatcacctt 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||  | ||||| |||||| ||||| ||||||||| ||||||||||| |     
T  3701695 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcaaatttgagggagctatgatgataatatctgtggtgttcggtaacatcacttc 3701794  T
Q  99 tcctgaaacacttgatgaa 117  Q
    |||||||||| | ||||||    
T  3701795 tcctgaaacattggatgaa 3701813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 3719514 - 3719598
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca--tttctgagagctgtgatgaaaatatttgtggtgtt 83  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  || | | ||||| ||||||||| |||||| |||||    
T  3719514 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcaatttgcagggagctatgatgaaaacatttgttgtgtt 3719598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26807497 - 26807450
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26807497 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 26807450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32775295 - 32775342
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32775295 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 32775342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32814981 - 32815028
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32814981 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 32815028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 43849095 - 43848979
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttctgagagctgtgatgaa-aatatttgtggtgttgggtaacatcaccttt 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||    |||||||||||||  |||||  || |||||||||||||||  | |    
T  43849095 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcaatt---tgagctgtgatgaattatattcatgatgttgggtaacatcaattat 43848999  T
Q  100 cctgaaacacttgatgaaaa 119  Q
    ||||||||||| ||||||||    
T  43848998 cctgaaacactggatgaaaa 43848979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27981074 - 27981123
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatt 50  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27981074 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatt 27981123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 30953165 - 30953118
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30953165 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 30953118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4767540 - 4767488
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttct 53  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4767540 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttct 4767488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 38551353 - 38551403
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcattt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38551353 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcattt 38551403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30161859 - 30161909
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcattt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30161859 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcattt 30161909  T

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Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 51386311 - 51386261
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcattt 51  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51386311 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcattt 51386261  T

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Target: chr4; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26741419 - 26741371
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcat 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26741419 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcat 26741371  T

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Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 19186016 - 19186063
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19186016 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 19186063  T

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Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25796197 - 25796244
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25796197 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 25796244  T

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Target: chr6 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 21882932 - 21882979
Alignment:
Q  1 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21882932 tagtaccctgccacggtacagacccgggttcgattcccggctggtgca 21882979  T

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