View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17932_low_15 (Length: 328)
Name: NF17932_low_15
Description: NF17932
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17932_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 18 - 320
Target Start/End: Complemental strand, 104657 - 104355
Alignment:
| Q |
18 |
atagcaaatgcaaactctgaaggtaagtaaagtacagtctcttttgttttgattgatacatacaaacaagcatacacataatctgaaagaaagaatcttt |
117 |
Q |
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| T |
104657 |
atagcaaatgcaaactctgaaggtaagtaaagtacagtctcttttgttttgattgatacatacaaacaagcatacacataatctgaaagaaagaatcttt |
104558 |
T |
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| Q |
118 |
tgttttgatgttctgtctgtctgtctgatgaaaactaacaggtgatgccttgtatgcattcagaagagctgtaaaagacccaaataacattctacagagt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
104557 |
tgttttgatgttctgtctgtctgtctgatgaaaactaacaggtgatgccttgtatgcattcagaagagctgtaaaagacccaaataacattctacagagt |
104458 |
T |
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| Q |
218 |
tgggaccccactttggtggatccttgtacatggtttcatgttacctgtgatcgtgataaccacgttactagactgtaactatcttttactttctcttcat |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
104457 |
tgggaccccactttggtggatccttgtacatggtttcatgttacctgtgatcgtgataaccacgttactagactgtaactatcttttactttctcttctt |
104358 |
T |
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| Q |
318 |
ttc |
320 |
Q |
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| T |
104357 |
ttc |
104355 |
T |
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