View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17933_low_14 (Length: 299)
Name: NF17933_low_14
Description: NF17933
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17933_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 21 - 281
Target Start/End: Complemental strand, 43453563 - 43453303
Alignment:
| Q |
21 |
aataggaatgtcctggaagcagaaaacagaaactcaaaatactttaaaagtttcaaagaacattactgcagttatttcgatttctgagaagaagttgctc |
120 |
Q |
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| T |
43453563 |
aataggaatgtcctggaagcagaaaacagaaactcaaaatactttaaaagtttcaaagaacattactgcagttatttcgatttctgagaagaagttgctc |
43453464 |
T |
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| Q |
121 |
atatgatccacctgcacatcacttctgggacctttgtcaataccggcccgtttaagaaggacttctctaataagaggctttccagagaagctgaacctcc |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43453463 |
atatgatccacctgcacatcacttctgggacctttgtcaataccggcccgtttaagaaggacttctctaataagaggctttccagagaagctgaacctcc |
43453364 |
T |
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| Q |
221 |
cttgcagtgacataattgtatcagcagctgctaactgggtagtagggaaatctgagttcct |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43453363 |
cttgcagtgacataattgtatcagcagctgctaactgggtagtagggaaatctgagttcct |
43453303 |
T |
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