View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17939_high_10 (Length: 239)
Name: NF17939_high_10
Description: NF17939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17939_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 2633748 - 2633940
Alignment:
| Q |
17 |
gttccttcctacaagattagtcttccttttccatcttcatagtgttagccctttttcaacaattgaccaaggctaatgaagttactcttcatttttggga |
116 |
Q |
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| T |
2633748 |
gttccttcctacaagattagtcttccttttccatcttcatagtgttagccctttttcaacaattgaccaaggctaatgaagttactcttcatttttggga |
2633847 |
T |
|
| Q |
117 |
tatacaacacctctgagatgtaggattctttgcccttctttatttgaattatcactttattattacattttgcatttacaacactattatatc |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2633848 |
tatacaacacctctgagatgtaggattctttgcccttctttatttgaatcatcactttattattacattttgcatttacaacactattatatc |
2633940 |
T |
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