View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17941_high_35 (Length: 285)
Name: NF17941_high_35
Description: NF17941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17941_high_35 |
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Alignment Details
Target: chr6 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 1330280 - 1330023
Alignment:
| Q |
16 |
aaaatatttggtatgttttttcttatatgatttcaaggagttggtgtttctcctaataaagagaattttgttgaagtttatgaggatgaaaataatgggg |
115 |
Q |
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| T |
1330280 |
aaaatatttggtatgttttttcttatatgatttcaaggagttggtgtttctcctaataaagagaattttgttgaagtttatgaggatgaaaataatgggg |
1330181 |
T |
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| Q |
116 |
ttattagctacgggttaagatggtggaaaaattggcaaagaaattcatggttgttatcttctctgcattttcacttcaatttctctctagttctacatgg |
215 |
Q |
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| T |
1330180 |
ttattagctacgggttaagatggtggaaaaattggcaaagaaattcatggttgttatcttctctgcattttcaattcaatttctctctagttctacatgg |
1330081 |
T |
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| Q |
216 |
ttttcaattctctgaatccatttgtgagacctctccttccttttatagttgaaattga |
273 |
Q |
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| T |
1330080 |
ttttcaattctctgaatccatttgtgagacctctccttccttttatagttgaaattga |
1330023 |
T |
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