View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17941_low_42 (Length: 260)

Name: NF17941_low_42
Description: NF17941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17941_low_42
NF17941_low_42
[»] chr2 (79 HSPs)
chr2 (1-146)||(35412048-35412193)
chr2 (1-144)||(341312-341455)
chr2 (1-144)||(10714179-10714322)
chr2 (1-144)||(44490475-44490618)
chr2 (1-141)||(28788870-28789010)
chr2 (1-144)||(1650674-1650817)
chr2 (1-144)||(17549240-17549383)
chr2 (1-143)||(3888872-3889014)
chr2 (1-147)||(10192256-10192402)
chr2 (1-144)||(30488080-30488223)
chr2 (1-144)||(29421864-29422006)
chr2 (1-143)||(33274568-33274710)
chr2 (1-142)||(11724619-11724760)
chr2 (1-144)||(9912083-9912227)
chr2 (1-141)||(22196094-22196234)
chr2 (1-141)||(23926562-23926702)
chr2 (1-144)||(18449356-18449499)
chr2 (1-143)||(3322164-3322306)
chr2 (1-143)||(15461426-15461568)
chr2 (1-106)||(1270280-1270385)
chr2 (1-144)||(2450259-2450402)
chr2 (1-144)||(42030710-42030853)
chr2 (7-144)||(11723705-11723843)
chr2 (1-78)||(16350658-16350735)
chr2 (1-145)||(19079259-19079402)
chr2 (1-131)||(29175095-29175225)
chr2 (1-144)||(31556918-31557063)
chr2 (3-143)||(13421073-13421215)
chr2 (1-144)||(29154064-29154207)
chr2 (1-147)||(38574789-38574935)
chr2 (1-106)||(22899057-22899162)
chr2 (1-144)||(26499422-26499554)
chr2 (1-144)||(42950690-42950823)
chr2 (37-147)||(3321993-3322103)
chr2 (1-144)||(22486167-22486308)
chr2 (1-74)||(40657471-40657544)
chr2 (1-118)||(38574607-38574724)
chr2 (44-144)||(42030539-42030639)
chr2 (25-144)||(341507-341626)
chr2 (1-130)||(11122815-11122945)
chr2 (44-146)||(35411875-35411977)
chr2 (44-145)||(26499625-26499726)
chr2 (47-143)||(28789084-28789180)
chr2 (44-144)||(30488294-30488394)
chr2 (30-144)||(9027225-9027339)
chr2 (1-53)||(9027116-9027168)
chr2 (25-141)||(11724812-11724928)
chr2 (25-145)||(44490303-44490423)
chr2 (33-144)||(12937587-12937698)
chr2 (1-59)||(20663794-20663852)
chr2 (44-146)||(22899233-22899335)
chr2 (25-146)||(23926389-23926510)
chr2 (44-141)||(40657303-40657400)
chr2 (25-141)||(1270112-1270228)
chr2 (25-147)||(1650503-1650622)
chr2 (37-141)||(3889078-3889182)
chr2 (25-144)||(10192084-10192204)
chr2 (25-133)||(29421704-29421812)
chr2 (25-141)||(42950522-42950638)
chr2 (1-147)||(1479198-1479333)
chr2 (44-141)||(9911912-9912012)
chr2 (31-141)||(11122647-11122757)
chr2 (25-143)||(15461256-15461374)
chr2 (86-142)||(20663914-20663970)
chr2 (25-105)||(31556786-31556866)
chr2 (44-144)||(18449567-18449667)
chr2 (87-144)||(19079525-19079582)
chr2 (87-148)||(22485990-22486051)
chr2 (94-147)||(9253109-9253162)
chr2 (44-141)||(17549071-17549169)
chr2 (25-143)||(29154258-29154376)
chr2 (1-53)||(16403789-16403841)
chr2 (4-52)||(30842241-30842289)
chr2 (86-144)||(4980641-4980700)
chr2 (93-144)||(16350861-16350912)
chr2 (25-144)||(1479028-1479147)
chr2 (86-144)||(13421333-13421391)
chr2 (86-143)||(29379781-29379838)
chr2 (86-143)||(33274396-33274453)
[»] chr7 (88 HSPs)
chr7 (1-147)||(2699788-2699934)
chr7 (1-145)||(42391295-42391439)
chr7 (1-147)||(20121376-20121522)
chr7 (1-147)||(41857138-41857284)
chr7 (1-144)||(41922282-41922425)
chr7 (1-144)||(45055322-45055465)
chr7 (1-146)||(7149289-7149434)
chr7 (3-144)||(38495087-38495228)
chr7 (1-144)||(24331379-24331522)
chr7 (3-142)||(45062235-45062374)
chr7 (1-141)||(7173102-7173242)
chr7 (1-141)||(8805747-8805887)
chr7 (1-145)||(21733067-21733211)
chr7 (1-141)||(12424016-12424157)
chr7 (1-147)||(44457779-44457927)
chr7 (1-141)||(11338063-11338203)
chr7 (1-144)||(34287687-34287831)
chr7 (1-127)||(8949309-8949435)
chr7 (1-141)||(45867616-45867756)
chr7 (1-144)||(41749751-41749894)
chr7 (1-142)||(17173090-17173232)
chr7 (1-106)||(16860908-16861013)
chr7 (1-106)||(31283192-31283297)
chr7 (25-144)||(29099369-29099488)
chr7 (1-78)||(49023749-49023826)
chr7 (25-146)||(44457979-44458100)
chr7 (3-130)||(19125004-19125132)
chr7 (25-146)||(20121204-20121324)
chr7 (25-146)||(41857336-41857456)
chr7 (25-144)||(12423845-12423964)
chr7 (25-144)||(45867445-45867564)
chr7 (33-147)||(28588314-28588428)
chr7 (25-141)||(8522506-8522623)
chr7 (44-144)||(45055536-45055636)
chr7 (1-105)||(46426832-46426936)
chr7 (25-144)||(38494914-38495033)
chr7 (25-147)||(11337889-11338011)
chr7 (44-141)||(8805958-8806055)
chr7 (25-146)||(31813728-31813849)
chr7 (1-147)||(47221878-47222012)
chr7 (1-141)||(11682093-11682231)
chr7 (3-130)||(23036820-23036948)
chr7 (1-68)||(46738435-46738502)
chr7 (1-144)||(48766029-48766173)
chr7 (25-144)||(7149486-7149605)
chr7 (25-144)||(34287516-34287635)
chr7 (44-147)||(42391510-42391613)
chr7 (25-144)||(47221707-47221826)
chr7 (30-144)||(21455754-21455868)
chr7 (25-140)||(21626938-21627052)
chr7 (1-78)||(31813901-31813978)
chr7 (1-143)||(49114442-49114588)
chr7 (25-144)||(23036647-23036766)
chr7 (1-147)||(19104444-19104590)
chr7 (25-147)||(19124828-19124950)
chr7 (1-53)||(31115969-31116021)
chr7 (25-130)||(45062076-45062181)
chr7 (44-144)||(49023577-49023678)
chr7 (44-147)||(31283367-31283470)
chr7 (3-77)||(32165288-32165362)
chr7 (25-145)||(24331574-24331695)
chr7 (44-144)||(21733282-21733382)
chr7 (30-142)||(46426663-46426775)
chr7 (86-144)||(8522324-8522382)
chr7 (86-144)||(43575306-43575364)
chr7 (86-147)||(21455579-21455640)
chr7 (44-142)||(41922496-41922594)
chr7 (44-142)||(43575064-43575162)
chr7 (1-41)||(43575233-43575273)
chr7 (25-145)||(46738263-46738383)
chr7 (1-47)||(14792954-14793000)
chr7 (1-47)||(15239944-15239990)
chr7 (86-144)||(21555891-21555949)
chr7 (86-144)||(27551897-27551955)
chr7 (4-65)||(41054768-41054829)
chr7 (25-130)||(10543606-10543711)
chr7 (1-41)||(32064493-32064533)
chr7 (17-53)||(32072071-32072107)
chr7 (2-54)||(43268101-43268153)
chr7 (86-141)||(43699925-43699980)
chr7 (25-142)||(49114279-49114396)
chr7 (97-144)||(19104274-19104321)
chr7 (93-144)||(31116049-31116100)
chr7 (37-141)||(41749583-41749687)
chr7 (1-31)||(21455667-21455697)
chr7 (93-142)||(31115839-31115888)
chr7 (86-147)||(32072202-32072263)
chr7 (109-145)||(31813997-31814033)
[»] chr4 (79 HSPs)
chr4 (1-144)||(16019957-16020100)
chr4 (1-142)||(17362469-17362610)
chr4 (1-145)||(52538050-52538194)
chr4 (1-144)||(52654103-52654246)
chr4 (7-144)||(20984091-20984228)
chr4 (1-146)||(32922065-32922210)
chr4 (1-141)||(26842803-26842943)
chr4 (1-144)||(41376584-41376727)
chr4 (1-142)||(7067413-7067554)
chr4 (1-141)||(41935496-41935636)
chr4 (1-144)||(10993625-10993768)
chr4 (1-144)||(26886781-26886924)
chr4 (1-140)||(46689328-46689467)
chr4 (1-147)||(45655864-45656009)
chr4 (1-144)||(22539858-22540001)
chr4 (1-144)||(18568196-18568340)
chr4 (1-145)||(31857752-31857896)
chr4 (1-145)||(43264242-43264386)
chr4 (1-144)||(15516306-15516448)
chr4 (12-146)||(9902838-9902972)
chr4 (1-143)||(38555943-38556085)
chr4 (1-144)||(49387354-49387496)
chr4 (1-145)||(35130790-35130939)
chr4 (8-144)||(16530318-16530454)
chr4 (1-146)||(44550907-44551058)
chr4 (1-141)||(23572772-23572912)
chr4 (1-144)||(32488755-32488898)
chr4 (1-144)||(24270533-24270675)
chr4 (1-78)||(25331988-25332065)
chr4 (1-78)||(26948058-26948135)
chr4 (1-142)||(30636949-30637089)
chr4 (3-144)||(36868205-36868346)
chr4 (1-78)||(37068784-37068861)
chr4 (25-142)||(54036866-54036983)
chr4 (44-144)||(32922281-32922381)
chr4 (1-146)||(39792088-39792235)
chr4 (1-146)||(53563122-53563266)
chr4 (44-144)||(9902653-9902753)
chr4 (44-143)||(35131010-35131109)
chr4 (25-144)||(39791917-39792036)
chr4 (1-75)||(45801389-45801462)
chr4 (44-147)||(52537876-52537979)
chr4 (31-141)||(26843000-26843110)
chr4 (1-78)||(32188085-32188162)
chr4 (44-142)||(44551129-44551227)
chr4 (25-142)||(5747877-5747994)
chr4 (25-142)||(16530513-16530630)
chr4 (25-145)||(52653930-52654051)
chr4 (86-144)||(45801219-45801277)
chr4 (25-144)||(18568024-18568144)
chr4 (44-146)||(17362296-17362399)
chr4 (25-141)||(26886613-26886729)
chr4 (44-145)||(26948198-26948300)
chr4 (1-42)||(44835144-44835185)
chr4 (44-144)||(36868032-36868132)
chr4 (96-163)||(37068666-37068733)
chr4 (25-144)||(15516500-15516619)
chr4 (44-144)||(25331815-25331917)
chr4 (1-35)||(46648240-46648274)
chr4 (1-42)||(5748046-5748087)
chr4 (25-142)||(41376779-41376896)
chr4 (25-78)||(46674786-46674839)
chr4 (1-41)||(18636011-18636051)
chr4 (86-145)||(44038149-44038209)
chr4 (86-142)||(45655695-45655751)
chr4 (47-143)||(5748080-5748176)
chr4 (87-142)||(44834981-44835036)
chr4 (44-144)||(46648069-46648169)
chr4 (8-54)||(49498614-49498661)
chr4 (1-147)||(5618291-5618438)
chr4 (3-41)||(8358545-8358583)
chr4 (94-144)||(41944161-41944211)
chr4 (3-48)||(9644935-9644980)
chr4 (1-54)||(23962937-23962990)
chr4 (86-143)||(50512746-50512803)
chr4 (1-50)||(54996951-54997000)
chr4 (111-143)||(43781352-43781384)
chr4 (86-142)||(46648279-46648335)
chr4 (1-53)||(46674682-46674734)
[»] chr8 (52 HSPs)
chr8 (1-147)||(27712935-27713081)
chr8 (1-144)||(8156879-8157022)
chr8 (1-144)||(26938186-26938329)
chr8 (1-144)||(36556706-36556849)
chr8 (1-144)||(33279107-33279252)
chr8 (1-142)||(30253628-30253769)
chr8 (1-141)||(34632396-34632536)
chr8 (1-144)||(148293-148436)
chr8 (1-144)||(34198835-34198978)
chr8 (1-142)||(28828218-28828359)
chr8 (1-144)||(39198615-39198760)
chr8 (3-147)||(10925100-10925243)
chr8 (1-144)||(21660726-21660870)
chr8 (1-141)||(30464085-30464225)
chr8 (1-129)||(40277237-40277365)
chr8 (1-144)||(42684787-42684931)
chr8 (1-141)||(41617211-41617351)
chr8 (1-130)||(4968024-4968153)
chr8 (1-130)||(9887306-9887435)
chr8 (1-146)||(26187299-26187444)
chr8 (1-142)||(33526942-33527083)
chr8 (1-144)||(29596573-29596716)
chr8 (1-143)||(43497208-43497350)
chr8 (25-143)||(29596403-29596521)
chr8 (44-141)||(8156712-8156808)
chr8 (3-141)||(18805918-18806056)
chr8 (44-147)||(34199049-34199152)
chr8 (1-127)||(1235755-1235880)
chr8 (25-141)||(42684983-42685099)
chr8 (25-147)||(33278932-33279055)
chr8 (1-78)||(38229781-38229858)
chr8 (1-53)||(12649571-12649623)
chr8 (44-145)||(41617047-41617148)
chr8 (1-144)||(2241643-2241789)
chr8 (1-63)||(18929871-18929932)
chr8 (1-144)||(24419613-24419756)
chr8 (44-144)||(39198831-39198930)
chr8 (25-142)||(18805748-18805865)
chr8 (49-141)||(148484-148576)
chr8 (25-144)||(2241471-2241590)
chr8 (46-144)||(18929702-18929800)
chr8 (25-142)||(26938381-26938496)
chr8 (25-140)||(17494918-17495033)
chr8 (1-42)||(17494825-17494866)
chr8 (86-147)||(30253882-30253943)
chr8 (1-42)||(37727370-37727411)
chr8 (86-147)||(40277485-40277546)
chr8 (47-147)||(37727404-37727505)
chr8 (86-141)||(34213388-34213443)
chr8 (89-143)||(17494765-17494819)
chr8 (25-78)||(29726722-29726775)
chr8 (25-78)||(40277417-40277470)
[»] chr1 (83 HSPs)
chr1 (1-147)||(40934589-40934735)
chr1 (3-144)||(32694481-32694622)
chr1 (1-145)||(9877574-9877718)
chr1 (1-144)||(5586658-5586801)
chr1 (3-142)||(12649924-12650063)
chr1 (1-146)||(4695107-4695252)
chr1 (1-143)||(26095660-26095803)
chr1 (1-144)||(33471582-33471725)
chr1 (1-147)||(28554187-28554333)
chr1 (3-144)||(5618071-5618212)
chr1 (3-144)||(34480184-34480325)
chr1 (1-141)||(1501522-1501662)
chr1 (1-147)||(8853093-8853238)
chr1 (1-147)||(39672833-39672979)
chr1 (1-144)||(6488871-6489015)
chr1 (1-141)||(40770311-40770451)
chr1 (86-184)||(8641203-8641301)
chr1 (1-144)||(25012819-25012961)
chr1 (5-144)||(27065145-27065284)
chr1 (1-144)||(49021837-49021980)
chr1 (1-147)||(45286403-45286549)
chr1 (1-146)||(48524489-48524634)
chr1 (1-133)||(10296603-10296735)
chr1 (1-144)||(44344023-44344167)
chr1 (1-144)||(730799-730942)
chr1 (1-144)||(46283573-46283716)
chr1 (150-260)||(8641954-8642065)
chr1 (1-141)||(16515805-16515945)
chr1 (2-143)||(8640948-8641087)
chr1 (3-141)||(48970873-48971008)
chr1 (2-141)||(8828579-8828721)
chr1 (1-147)||(50208530-50208673)
chr1 (1-78)||(17504109-17504186)
chr1 (3-141)||(26874230-26874368)
chr1 (1-144)||(35521225-35521364)
chr1 (1-140)||(27547113-27547252)
chr1 (25-144)||(45286232-45286351)
chr1 (25-147)||(5618266-5618388)
chr1 (1-127)||(45569175-45569301)
chr1 (44-144)||(26095488-26095588)
chr1 (44-147)||(31289251-31289354)
chr1 (3-62)||(3459717-3459776)
chr1 (44-144)||(8853309-8853409)
chr1 (25-144)||(17504238-17504357)
chr1 (1-144)||(45315257-45315399)
chr1 (1-145)||(43726212-43726348)
chr1 (25-147)||(16515631-16515753)
chr1 (38-147)||(7349767-7349876)
chr1 (32-144)||(25012647-25012760)
chr1 (25-147)||(40934413-40934537)
chr1 (44-142)||(39673050-39673148)
chr1 (44-142)||(12650136-12650234)
chr1 (1-54)||(24234627-24234680)
chr1 (25-147)||(32694306-32694427)
chr1 (1-54)||(39363901-39363954)
chr1 (1-62)||(50312176-50312237)
chr1 (44-141)||(731013-731110)
chr1 (44-141)||(1501733-1501830)
chr1 (44-141)||(40770143-40770240)
chr1 (44-144)||(9877404-9877503)
chr1 (25-144)||(17191198-17191318)
chr1 (89-144)||(27067190-27067245)
chr1 (47-144)||(35521425-35521521)
chr1 (86-144)||(29716410-29716468)
chr1 (25-144)||(44344219-44344338)
chr1 (44-141)||(3459849-3459947)
chr1 (25-147)||(24234732-24234853)
chr1 (44-141)||(4694939-4695036)
chr1 (30-78)||(27065344-27065392)
chr1 (25-144)||(8828774-8828894)
chr1 (87-142)||(17504037-17504092)
chr1 (90-141)||(33471419-33471470)
chr1 (44-128)||(49021683-49021767)
chr1 (86-144)||(45569015-45569072)
chr1 (86-144)||(46283401-46283459)
chr1 (25-144)||(50312006-50312124)
chr1 (50-144)||(30146279-30146373)
chr1 (86-147)||(34480440-34480501)
chr1 (3-78)||(31087597-31087672)
chr1 (86-147)||(19897173-19897234)
chr1 (2-63)||(29570709-29570770)
chr1 (4-41)||(30027071-30027108)
chr1 (1-53)||(35206853-35206905)
[»] chr6 (54 HSPs)
chr6 (1-145)||(3011911-3012056)
chr6 (1-141)||(22568934-22569074)
chr6 (1-144)||(2316660-2316803)
chr6 (1-144)||(9899366-9899509)
chr6 (1-141)||(3105607-3105747)
chr6 (1-144)||(8129704-8129847)
chr6 (1-144)||(13853142-13853285)
chr6 (1-147)||(12240652-12240798)
chr6 (3-147)||(2882880-2883024)
chr6 (1-141)||(20027944-20028084)
chr6 (1-147)||(9220274-9220420)
chr6 (1-143)||(24324993-24325135)
chr6 (1-141)||(684956-685096)
chr6 (1-144)||(9546410-9546554)
chr6 (1-144)||(13178225-13178366)
chr6 (3-144)||(21926064-21926205)
chr6 (1-131)||(17853656-17853786)
chr6 (7-147)||(11361957-11362097)
chr6 (1-141)||(8487863-8488005)
chr6 (3-147)||(2863577-2863721)
chr6 (25-146)||(28852186-28852307)
chr6 (1-78)||(14655247-14655324)
chr6 (3-78)||(24896238-24896313)
chr6 (1-131)||(28852359-28852489)
chr6 (1-73)||(25121568-25121640)
chr6 (25-141)||(685148-685264)
chr6 (44-144)||(9899195-9899295)
chr6 (25-144)||(9546606-9546725)
chr6 (25-144)||(17853838-17853957)
chr6 (44-144)||(25121711-25121811)
chr6 (25-144)||(13178418-13178537)
chr6 (25-144)||(22568763-22568882)
chr6 (44-142)||(9220105-9220203)
chr6 (27-144)||(27820659-27820776)
chr6 (44-144)||(1925116-1925216)
chr6 (44-147)||(21926278-21926380)
chr6 (25-146)||(2316487-2316608)
chr6 (44-133)||(3105818-3105907)
chr6 (30-146)||(24325192-24325309)
chr6 (44-144)||(1136959-1137059)
chr6 (25-141)||(20027776-20027892)
chr6 (1-62)||(1925287-1925348)
chr6 (87-144)||(1925408-1925465)
chr6 (25-144)||(11361789-11361908)
chr6 (87-144)||(7279553-7279610)
chr6 (25-143)||(12240481-12240599)
chr6 (87-144)||(24335533-24335590)
chr6 (25-141)||(13853337-13853452)
chr6 (89-144)||(25121526-25121581)
chr6 (86-142)||(14655078-14655134)
chr6 (1-41)||(25026078-25026118)
chr6 (25-143)||(2863775-2863893)
chr6 (25-131)||(2883078-2883184)
chr6 (44-141)||(8129535-8129633)
[»] scaffold0592 (1 HSPs)
scaffold0592 (3-147)||(8561-8705)
[»] chr5 (77 HSPs)
chr5 (1-145)||(7601764-7601908)
chr5 (3-147)||(19131043-19131187)
chr5 (1-144)||(3279359-3279502)
chr5 (1-144)||(40952067-40952211)
chr5 (1-147)||(39589747-39589894)
chr5 (1-146)||(2426227-2426372)
chr5 (1-146)||(14729617-14729762)
chr5 (1-146)||(14871732-14871877)
chr5 (1-144)||(16736801-16736946)
chr5 (1-142)||(7610434-7610574)
chr5 (1-141)||(1643710-1643850)
chr5 (1-144)||(12854746-12854890)
chr5 (1-141)||(33429536-33429676)
chr5 (1-144)||(1099063-1099206)
chr5 (1-144)||(33381429-33381572)
chr5 (1-147)||(42610777-42610924)
chr5 (1-147)||(24858400-24858546)
chr5 (1-141)||(37092350-37092491)
chr5 (1-145)||(22621218-22621362)
chr5 (1-144)||(32772162-32772306)
chr5 (1-127)||(13577434-13577560)
chr5 (1-142)||(2467230-2467371)
chr5 (1-147)||(3168091-3168236)
chr5 (1-78)||(18707336-18707413)
chr5 (1-132)||(37943538-37943668)
chr5 (1-142)||(8357068-8357208)
chr5 (1-130)||(19984274-19984403)
chr5 (1-141)||(31618338-31618477)
chr5 (44-147)||(33429747-33429850)
chr5 (1-147)||(30129472-30129616)
chr5 (44-146)||(39589613-39589715)
chr5 (1-122)||(13455698-13455819)
chr5 (1-141)||(5239281-5239421)
chr5 (1-144)||(12875838-12875982)
chr5 (25-144)||(1643539-1643658)
chr5 (44-147)||(7601590-7601693)
chr5 (25-144)||(31485957-31486076)
chr5 (1-78)||(2492834-2492911)
chr5 (30-144)||(19130870-19130984)
chr5 (25-143)||(40952263-40952381)
chr5 (1-68)||(2961065-2961132)
chr5 (1-68)||(2969533-2969600)
chr5 (44-144)||(32771991-32772091)
chr5 (1-139)||(13697489-13697627)
chr5 (37-145)||(3974212-3974320)
chr5 (25-141)||(7610266-7610382)
chr5 (86-146)||(30129731-30129791)
chr5 (25-146)||(42610976-42611097)
chr5 (86-144)||(6539993-6540050)
chr5 (25-144)||(13697318-13697437)
chr5 (30-145)||(40881461-40881576)
chr5 (25-147)||(16736998-16737120)
chr5 (44-122)||(33381642-33381720)
chr5 (1-53)||(3974384-3974436)
chr5 (44-144)||(2467059-2467159)
chr5 (1-47)||(6540156-6540202)
chr5 (44-141)||(2426443-2426541)
chr5 (43-144)||(6541422-6541523)
chr5 (44-144)||(12854574-12854675)
chr5 (25-141)||(14871929-14872046)
chr5 (86-141)||(3279189-3279244)
chr5 (11-144)||(8874344-8874483)
chr5 (25-141)||(13577268-13577384)
chr5 (87-146)||(17759794-17759853)
chr5 (90-144)||(42645034-42645087)
chr5 (25-147)||(2960891-2961013)
chr5 (25-147)||(2969359-2969481)
chr5 (25-147)||(13455871-13455991)
chr5 (1-54)||(17759933-17759986)
chr5 (49-131)||(18717809-18717891)
chr5 (1-40)||(17539518-17539557)
chr5 (86-144)||(18707263-18707321)
chr5 (86-144)||(24858659-24858717)
chr5 (86-144)||(40881609-40881667)
chr5 (1-41)||(15858109-15858149)
chr5 (1-53)||(23226779-23226831)
chr5 (6-62)||(26349226-26349282)
[»] scaffold0029 (2 HSPs)
scaffold0029 (1-144)||(73544-73687)
scaffold0029 (25-146)||(73371-73492)
[»] chr3 (91 HSPs)
chr3 (3-146)||(38675154-38675297)
chr3 (1-142)||(20209321-20209462)
chr3 (1-146)||(44664619-44664764)
chr3 (1-141)||(29434304-29434444)
chr3 (1-144)||(46292582-46292725)
chr3 (1-141)||(11221163-11221303)
chr3 (1-141)||(15543002-15543142)
chr3 (5-147)||(39778454-39778596)
chr3 (1-145)||(49002406-49002553)
chr3 (1-145)||(14463294-14463438)
chr3 (1-144)||(13997088-13997231)
chr3 (1-144)||(31574424-31574567)
chr3 (1-143)||(44919898-44920041)
chr3 (1-144)||(50710703-50710846)
chr3 (1-142)||(11989517-11989658)
chr3 (1-133)||(45214548-45214681)
chr3 (1-144)||(36546102-36546246)
chr3 (1-144)||(36562068-36562212)
chr3 (1-144)||(41943875-41944019)
chr3 (1-142)||(44036689-44036829)
chr3 (1-147)||(35747689-35747835)
chr3 (1-142)||(45171749-45171893)
chr3 (1-147)||(14201796-14201939)
chr3 (1-144)||(21017092-21017239)
chr3 (1-141)||(15020276-15020416)
chr3 (1-141)||(45540003-45540143)
chr3 (25-144)||(2862701-2862820)
chr3 (1-141)||(11439804-11439943)
chr3 (1-133)||(6954008-6954140)
chr3 (11-144)||(32809301-32809433)
chr3 (1-141)||(27812738-27812882)
chr3 (25-147)||(20209147-20209269)
chr3 (1-78)||(28843798-28843875)
chr3 (25-147)||(35415437-35415559)
chr3 (1-65)||(25061471-25061535)
chr3 (25-146)||(11220990-11221111)
chr3 (1-142)||(44976924-44977064)
chr3 (44-144)||(50711209-50711309)
chr3 (44-147)||(49002234-49002337)
chr3 (1-78)||(45567579-45567656)
chr3 (1-77)||(18168822-18168897)
chr3 (1-147)||(18461613-18461763)
chr3 (25-141)||(46292777-46292893)
chr3 (25-144)||(38674981-38675100)
chr3 (25-142)||(18677915-18678032)
chr3 (7-143)||(26844896-26845031)
chr3 (25-142)||(45567410-45567527)
chr3 (1-147)||(50711039-50711173)
chr3 (1-142)||(53712422-53712559)
chr3 (25-141)||(29434496-29434612)
chr3 (25-141)||(35747887-35748003)
chr3 (25-144)||(25061301-25061420)
chr3 (25-144)||(27812567-27812686)
chr3 (25-144)||(44976753-44976872)
chr3 (44-142)||(14463124-14463222)
chr3 (8-77)||(14626203-14626272)
chr3 (25-143)||(32809155-32809273)
chr3 (25-144)||(14201991-14202110)
chr3 (86-144)||(25061534-25061592)
chr3 (25-144)||(28843927-28844046)
chr3 (25-144)||(44664816-44664935)
chr3 (44-147)||(44920112-44920215)
chr3 (44-142)||(45214378-45214477)
chr3 (25-144)||(45539832-45539951)
chr3 (25-142)||(6954192-6954309)
chr3 (25-147)||(18168949-18169071)
chr3 (25-147)||(39778277-39778398)
chr3 (25-133)||(45171589-45171697)
chr3 (89-144)||(50710892-50710947)
chr3 (25-144)||(15543194-15543313)
chr3 (25-144)||(26845085-26845204)
chr3 (1-42)||(2773327-2773368)
chr3 (1-78)||(48738170-48738247)
chr3 (37-143)||(11989722-11989830)
chr3 (25-141)||(53712254-53712370)
chr3 (1-35)||(2862872-2862906)
chr3 (1-63)||(8084748-8084810)
chr3 (86-144)||(31574251-31574309)
chr3 (1-54)||(2397876-2397929)
chr3 (44-141)||(21016924-21017021)
chr3 (86-146)||(44036941-44037001)
chr3 (86-145)||(14626128-14626187)
chr3 (47-143)||(18678118-18678214)
chr3 (1-44)||(40612367-40612410)
chr3 (86-144)||(2773401-2773459)
chr3 (1-39)||(43378301-43378339)
chr3 (22-144)||(2579095-2579217)
chr3 (1-42)||(18678084-18678125)
chr3 (1-54)||(42619852-42619905)
chr3 (87-131)||(36546336-36546380)
chr3 (87-131)||(36561934-36561978)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-141)||(323584-323723)
scaffold0003 (86-144)||(323422-323480)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-146)||(258926-259071)
scaffold0009 (25-147)||(258752-258874)
[»] scaffold0024 (2 HSPs)
scaffold0024 (1-146)||(108027-108172)
scaffold0024 (30-144)||(107852-107971)
[»] scaffold0200 (1 HSPs)
scaffold0200 (1-146)||(4356-4505)
[»] scaffold0119 (3 HSPs)
scaffold0119 (1-101)||(41322-41422)
scaffold0119 (25-141)||(41474-41590)
scaffold0119 (41-106)||(30852-30917)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-144)||(257863-258002)
[»] scaffold0077 (2 HSPs)
scaffold0077 (1-78)||(9985-10062)
scaffold0077 (44-144)||(10133-10233)
[»] scaffold0019 (1 HSPs)
scaffold0019 (44-144)||(44870-44970)


Alignment Details
Target: chr2 (Bit Score: 101; Significance: 4e-50; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 35412048 - 35412193
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||    
T  35412048 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 35412147  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||||    
T  35412148 tgttacctgaaattaagttaagggactaaaagtgtaattttgccaa 35412193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 341455 - 341312
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||    
T  341455 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 341356  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||| | ||||||||||    
T  341355 tgttacctgaaattaagttaagggactaaaactgtaattttgcc 341312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 10714179 - 10714322
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||| ||||||||    
T  10714179 tctatgtttgcataagaatattaaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaatgaccaaac 10714278  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||    
T  10714279 tgttacctgaaattaagttaagggactaaaagtgtaattttgcc 10714322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 44490475 - 44490618
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||       |||||||||||||||    
T  44490475 tctatgtttgcataagaatattagatttgaagcttgaaaatatatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 44490574  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  ||||||| |||||| |||||||||| ||||||||||    
T  44490575 tgttacctgaaattatgttaagggactaaaagtgtaattttgcc 44490618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 28789010 - 28788870
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||| |||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||       |||||||||||||||    
T  28789010 tctatatttgtataagaatattagatttgaagcttgaaaatgtgtatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 28788911  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  ||||||||||||||||||||||||| |||||||    
T  28788910 tgttacctgaaattaagttaagagactaaaagtgtaatttt 28788870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 1650674 - 1650817
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||| |||||||||       |||||||||| ||||    
T  1650674 tctatgtttgcataagaatattagatttgaagcttgaatatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggacaaaac 1650773  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||    
T  1650774 tgttacctgaaattaagttaagggactaaaagtgtaattttgcc 1650817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 17549240 - 17549383
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||| ||||| |||||||||       | |||||||||||||    
T  17549240 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggataaaaaagaccaaattgaaatgaaaaaaaggtaaaggaccaaac 17549339  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||| |||||||||||||| || ||||||| ||||||||||    
T  17549340 tgttacttgaaattaagttaagggattaaaagtgtaattttgcc 17549383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 3889014 - 3888872
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||||       |||||| || |||||    
T  3889014 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaagaccaaattgaaatgaaaaaaagataaaagatcaaac 3888915  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||  |||||||||||||| |||||||| |||||||||||    
T  3888914 tgttacctgaaattaagttaagggactaaaaatataattttgc 3888872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 10192256 - 10192402
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| | ||| |||||       ||||||||| ||||     
T  10192256 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggacaaaattaaaatgaaaaaaagataaaggatcaaat 10192355  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||| | |||||||||||||| || |||||||||||||||||||||    
T  10192356 tgttatttgaaattaagttaagggattaaaagtataattttgccaaa 10192402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 30488223 - 30488080
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       |||||| || ||||     
T  30488223 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaatgatcaaat 30488124  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| || ||||||| ||||||||||    
T  30488123 tgttacctgaaattaagttaagggattaaaagtgtaattttgcc 30488080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 29421864 - 29422006
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||  ||||||||||||| |||||||||       |||||||||||||||    
T  29421864 tctatgtttgcataaaaatattagatttgaagcttgaaaatgcatatgaaaatcgacaaaaaggaccaaattgaaatg-aaaaaagataaaggaccaaac 29421962  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||  |||||||| ||||||||||||    
T  29421963 tgttacctgaaattaagttaaaggactaaaaatataattttgcc 29422006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 33274568 - 33274710
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| |||| |||||||||       ||||||||||||||     
T  33274568 tctatgtttgcataagaatattagatttgaaacttgaaaatgtatatgaaaatggataaaaagaaccaaattgaaatgaaaagaagataaaggaccaaat 33274667  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||   ||||||||||||| |||||||||| |||||||||    
T  33274668 tgttacctaaaattaagttaagggactaaaagtgtaattttgc 33274710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 11724760 - 11724619
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| || |||||||||       ||||||| |||||||    
T  11724760 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggatcaaattgaaatgaaaaaaagataaagcaccaaac 11724661  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||  ||||||||||||||  | ||||| ||||||||||    
T  11724660 tgttacctgaaattaagttaaggaattaaaaatataattttg 11724619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 9912083 - 9912227
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngat-aaaggaccaaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       ||| |||||| ||||    
T  9912083 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaaggatcaaa 9912182  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||   ||||||||||||| || ||||||| ||||||||||    
T  9912183 ctgttacctaaaattaagttaagggattaaaagtgtaattttgcc 9912227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 22196094 - 22196234
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| ||||         |||||||| |||||    
T  22196094 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaagaccaaattaaaataaaaaaaaaataaaggatcaaac 22196193  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||   |||||||||||||||||||||| |||||||||    
T  22196194 tgttacctaaaattaagttaagagactaaaaatataatttt 22196234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 23926562 - 23926702
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       |||||| || ||||     
T  23926562 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaagatcaaat 23926661  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  |||||||||||||| || ||||||| |||||||    
T  23926662 tgttacctgaaattaagttaagggattaaaagtgtaatttt 23926702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 18449499 - 18449356
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| | ||| |||||       ||| |||||||||||    
T  18449499 tctatgtttgcataagaatattagatttgaatcttgaaaatgtatatgaaaatggacaaaaaggactaaattaaaatgaaaaaaagatgaaggaccaaac 18449400  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||| ||||| ||||||| || ||||||||||    
T  18449399 tgttacctgaaattaaattaagggactaaatgtgtaattttgcc 18449356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 3322164 - 3322306
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||        |||||| ||| |||     
T  3322164 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaataaaaaaaagataaaagactaaat 3322263  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||| | |||||||| ||||| |||||||| | |||||||||    
T  3322264 tgttatttgaaattaaattaagtgactaaaattgtaattttgc 3322306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 15461426 - 15461568
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||| |||||| | ||||||||||| |||||||||       |||||| ||| ||||    
T  15461426 tctatgtttgcataaaaatattagatttgaaacttgaaaatgtatataaaaatggataaaaaggaccaaattgaaatgaaaaaaagataaatgactaaac 15461525  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||  |||||||||||||| |||||||||| |||||||||    
T  15461526 tgttacctgaaattaagttaagggactaaaagtgtaattttgc 15461568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 1270280 - 1270385
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       |||||||||||||||    
T  1270280 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 1270379  T
Q  101 tgttac 106  Q
    ||||||    
T  1270380 tgttac 1270385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 2450259 - 2450402
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||| ||||| |||||||||       |||||||||||||||    
T  2450259 tctatgtttgcataagaatatttaatttgaagcttgaaaatgtatatgaaaatggacaaaaaagaccaaattgaaatgtaaaaaagataaaggaccaaac 2450358  T
Q  101 tgtta-ctagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||| ||| ||||||| ||||| |||||||| | ||||||||||    
T  2450359 tgttatcta-aaattaaattaagggactaaaaatgtaattttgcc 2450402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 42030710 - 42030853
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||| ||||||||        ||||||||| |||||    
T  42030710 tctatgtttgcataagaatattagatttgaagctaaaaaatgtatatgaaaatggacaaaaaggaccaaattgaaattaaaaaaagataaaggatcaaac 42030809  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||   ||||||||| |||  |||||||||| ||||||||||    
T  42030810 tgttatctgaaattaagctaaaggactaaaagtgtaattttgcc 42030853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 144
Target Start/End: Complemental strand, 11723843 - 11723705
Alignment:
Q  7 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaat-gnnnnnnngataaaggaccaaactgtta 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||         ||||||||||||||||||||    
T  11723843 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaatgaccaaattgaaataaaaaaaaagataaaggaccaaactgtta 11723744  T
Q  106 ctagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |  ||||| |||||||| |||||||| | ||||||||||    
T  11723743 cctgaaataaagttaagggactaaaaatgtaattttgcc 11723705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 16350735 - 16350658
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  16350735 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatg 16350658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 19079402 - 19079259
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||        ||||||||||||||    
T  19079402 tctatgtttgtataagaatattagatttgaagtttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaa-ataaaggaccaaac 19079304  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcca 145  Q
    | ||||   | ||||||||||| || ||||||| |||||||||||    
T  19079303 ttttacctaatattaagttaagggattaaaagtgtaattttgcca 19079259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 29175095 - 29175225
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||| |||||       |||||| || |||||    
T  29175095 tctatgtttgcataagaatattagatttgaagcttgaaaatatatataaaaatgaacaaaaaagaccaaattaaaatgagaaaaagataaaagagcaaac 29175194  T
Q  101 tgttactagaaattaagttaagagactaaaa 131  Q
    | ||||  |||||||||||||| ||||||||    
T  29175195 tattacctgaaattaagttaagggactaaaa 29175225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 31556918 - 31557063
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    |||||||||||||||||||||| |||||||||||| |||||  ||||||||||| ||||||||||||| |||||||||        |||||| |||||||    
T  31556918 tctatgtttgcataagaatatttgatttgaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagataaatgaccaaa 31557017  T
Q  100 ctgttactagaaattaagttaagagact-aaaagtataattttgcc 144  Q
    |||||||  |||||||||||||| |||| |||||| ||||||||||    
T  31557018 ctgttacctgaaattaagttaagggactaaaaagtgtaattttgcc 31557063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 13421215 - 13421073
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg--nnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| || || ||| |||||         |||||||||||||||    
T  13421215 tatgtttgcataagaatattagatttgaaacttgaaaatgtatatgaaaatggacaaaaatgatcaaattaaaatgaaaaaaaaagataaaggaccaaac 13421116  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    | ||||  |||||||||||||  |||||||||| |||||||||    
T  13421115 tattacctgaaattaagttaaaggactaaaagtgtaattttgc 13421073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 29154207 - 29154064
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| |||||||||||||||||||||| ||  ||||||||||| || |||||||| | ||||||||        ||||||||||||||     
T  29154207 tctatgtttgcataaaaatattagatttgaagcttgaagatccatatgaaaatggaccaaaaggacaaaattgaaattaaaaaaagataaaggaccaaat 29154108  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||   |||||||||||||| |||||||||| ||||||||||    
T  29154107 tgttaactgaaattaagttaagggactaaaagtgtaattttgcc 29154064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 38574789 - 38574935
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||| ||||||||||||| |||||| |||| ||| |||||  ||||||||||| | ||||| ||||| |||||||||       |||||||||||||||    
T  38574789 tctatatttgcataagaatgttagatatgaaacttaaaaattcatatgaaaatggataaaaatgaccaaattgaaatgaaaaaaagataaaggaccaaac 38574888  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||  |||||||||||||| |||||||| | |||||||||||||    
T  38574889 tgttacatgaaattaagttaagggactaaaaatgtaattttgccaaa 38574935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22899162 - 22899057
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  |||| ||| |||||       |||||||||||||||    
T  22899162 tctatgtttgcataagaatattagatttgaagcttgaaaatatatataaaaatgaacaaaaaaaaccaaattaaaatgaaaaaaggataaaggaccaaac 22899063  T
Q  101 tgttac 106  Q
    ||||||    
T  22899062 tgttac 22899057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 26499554 - 26499422
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||| |||||||||        ||||||||||||||    
T  26499554 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatat----------aaaaaggaccaaattgaaatgaaaaaaa-ataaaggaccaaac 26499466  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||    
T  26499465 tgttacctgaaattaagttaagggactaaaagtgtaattttgcc 26499422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 42950690 - 42950823
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||| |||||||||       |||||| ||||||||    
T  42950690 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaat----------gaccaaattgaaatgaaaaaaagataaatgaccaaac 42950779  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||| ||||| |||||||||| ||||||||||    
T  42950780 tgttacctgaaattaaattaagggactaaaagtgtaattttgcc 42950823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 147
Target Start/End: Complemental strand, 3322103 - 3321993
Alignment:
Q  37 aaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtata 136  Q
    |||||||||||||||||||||||||||||||| ||| |||||       |||||||||||||||||||||   ||||||| |||||||||||||| | ||    
T  3322103 aaaatgtatatgaaaatgaacaaaaaggaccaaattaaaatgaaaaaaagataaaggaccaaactgttacctaaaattaaattaagagactaaaactgta 3322004  T
Q  137 attttgccaaa 147  Q
    |||||||||||    
T  3322003 attttgccaaa 3321993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 22486167 - 22486308
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||| ||| |||||       ||||||| || ||||    
T  22486167 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggac-aaaagtaccaaattaaaatg-aaaaaagataaagaacaaaac 22486264  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||  |||||||| |  |||||||||    
T  22486265 tgttacctgaaattaagttaaaggactaaaactgcaattttgcc 22486308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 40657471 - 40657544
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattga 74  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  40657471 tctatgtttgcttaagaatattatatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattga 40657544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 38574724 - 38574607
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| || ||| |||||       |||||| | ||||||    
T  38574724 tctatatttgcataagaatattagatttgaagcttgaaaatatatatgaaaatggacaaaaaggatcaaattaaaatgaaaaaaagataaaagtccaaac 38574625  T
Q  101 tgttactagaaattaagt 118  Q
    ||||||  ||||||||||    
T  38574624 tgttacctgaaattaagt 38574607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 42030639 - 42030539
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       ||||||||||| |||||||||| |||||||||||||| |||||||||| |||||||||    
T  42030639 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggacctaactgttacttgaaattaagttaagggactaaaagtgtaattttgc 42030540  T
Q  144 c 144  Q
    |    
T  42030539 c 42030539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 341507 - 341626
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||   ||||||||||||| |    
T  341507 attttaagcttaaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctaaaattaagttaaggg 341606  T
Q  125 actaaaagtataattttgcc 144  Q
    | ||||| | ||||||||||    
T  341607 attaaaactgtaattttgcc 341626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 11122815 - 11122945
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    ||||||||||||||| ||||| |||||||||| |||||||||||||| |||||| |||||||| |||| |||||||||        ||||||||||||||    
T  11122815 tctatgtttgcataaaaatataagatttgaagtttgaaaatgtatataaaaatggacaaaaagaaccaaattgaaatgaaaaaaaagataaaggaccaaa 11122914  T
Q  100 ctgttactagaaattaagttaagagactaaa 130  Q
    ||||||| | || |||| ||||| |||||||    
T  11122915 ctgttaccaaaatttaaattaagggactaaa 11122945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 146
Target Start/End: Complemental strand, 35411977 - 35411875
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| ||| |||||       ||||||||||||||| ||||| ||||||||||||||| |||||||||| |||||||||    
T  35411977 atatgaaaatggacaaaaaggaccaaattaaaatgaaaaaaagataaaggaccaaacagttaccagaaattaagttaagggactaaaagtgtaattttgc 35411878  T
Q  144 caa 146  Q
    |||    
T  35411877 caa 35411875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 145
Target Start/End: Original strand, 26499625 - 26499726
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||| ||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |||||||||| |||||||||    
T  26499625 atatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 26499724  T
Q  144 ca 145  Q
    ||    
T  26499725 ca 26499726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 28789084 - 28789180
Alignment:
Q  47 tgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    |||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |||||||||| |||||||||    
T  28789084 tgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 28789180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 44 - 144
Target Start/End: Original strand, 30488294 - 30488394
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||| ||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |||||||||| |||||||||    
T  30488294 atatgaaaatggacaaaaaagaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 30488393  T
Q  144 c 144  Q
    |    
T  30488394 c 30488394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 9027225 - 9027339
Alignment:
Q  30 aagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaa 129  Q
    |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||| ||||||||||  |||||||||||||| || |||    
T  9027225 aagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggactaaactgttacctgaaattaagttaagggattaa 9027324  T
Q  130 aagtataattttgcc 144  Q
    |||| ||||||||||    
T  9027325 aagtgtaattttgcc 9027339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9027168 - 9027116
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaat 53  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9027168 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaat 9027116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 11724812 - 11724928
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       ||||||| |||||||| |||   ||||||||||||||||    
T  11724812 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaagaaccaaacttttatctgaaattaagttaagag 11724911  T
Q  125 actaaaagtataatttt 141  Q
    ||||||||| |||||||    
T  11724912 actaaaagtgtaatttt 11724928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 145
Target Start/End: Complemental strand, 44490423 - 44490303
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| ||| | |||||||||||| ||||||||||||| ||||||||        |||||||||| ||||||||||  ||||||||||||||      
T  44490423 attttaagcttaaaattttatatgaaaatggacaaaaaggaccaaattgaaattaaaaaaagataaaggactaaactgttacctgaaattaagttaagga 44490324  T
Q  125 actaaaagtataattttgcca 145  Q
    ||||||||| |||||||||||    
T  44490323 actaaaagtgtaattttgcca 44490303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 144
Target Start/End: Original strand, 12937587 - 12937698
Alignment:
Q  33 cttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaag 132  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||||       |||||||||| ||||| |||   |||||||||||||| || ||||||    
T  12937587 cttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggactaaactattatctgaaattaagttaagggattaaaag 12937686  T
Q  133 tataattttgcc 144  Q
    | ||||||||||    
T  12937687 tgtaattttgcc 12937698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20663852 - 20663794
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaa 59  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||    
T  20663852 tctatgtttgcataagaatattagatttgaagcttaaaaatgtatataaaaatggacaa 20663794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 146
Target Start/End: Original strand, 22899233 - 22899335
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    |||||||||| |||||||| ||||| |||||||||       ||||||| |||||||||||||  |||||||||||||| |||||||| ||||||||| |    
T  22899233 atatgaaaataaacaaaaatgaccaaattgaaatgaaaaaaagataaagaaccaaactgttacctgaaattaagttaagggactaaaaatataatttttc 22899332  T
Q  144 caa 146  Q
    |||    
T  22899333 caa 22899335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 23926510 - 23926389
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||| ||||| |||||||||       |||||| ||| ||||||||||  ||||||||||||||      
T  23926510 attttaagcttaaaaattcatatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaatgacgaaactgttacctgaaattaagttaagga 23926411  T
Q  125 actaaaagtataattttgccaa 146  Q
    ||||||||| ||||||||||||    
T  23926410 actaaaagtgtaattttgccaa 23926389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 40657400 - 40657303
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  ||| |||||||||| ||||| |||| |||||||    
T  40657400 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaagttaagttaagggactataagtgtaatttt 40657303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 1270228 - 1270112
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  |||||||||||||||||||||| || |||||||||       ||||||| ||||||||||||   |||||||||||||| |    
T  1270228 attttaagcttaaaaattcatatgaaaatgaacaaaaaggaacaaattgaaatgaaaataagataaagaaccaaactgttatgtgaaattaagttaaggg 1270129  T
Q  125 actaaaagtataatttt 141  Q
    ||||||| | |||||||    
T  1270128 actaaaaatgtaatttt 1270112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 1650622 - 1650503
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| |||||||| |||| |||||||||       |||||||||||||||||||||  |||||||||||||| |    
T  1650622 attttaagcttaaaaattcatatgaaaatggacaaaaagaaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaggg 1650523  T
Q  125 actaaaagtataattttgccaaa 147  Q
    |||   ||| |||||||||||||    
T  1650522 act---agtgtaattttgccaaa 1650503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 141
Target Start/End: Original strand, 3889078 - 3889182
Alignment:
Q  37 aaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtata 136  Q
    ||||| |||||||||||  ||||||||||||| |||||||||        |||||||| |||||||||||  |||||||||||||| |||||||||| ||    
T  3889078 aaaatttatatgaaaatagacaaaaaggaccaaattgaaatgaaaaaaaaataaaggatcaaactgttacctgaaattaagttaagggactaaaagtgta 3889177  T
Q  137 atttt 141  Q
    |||||    
T  3889178 atttt 3889182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 10192204 - 10192084
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngat-aaaggaccaaactgttactagaaattaagttaaga 123  Q
    |||| |||||| |||||  ||||||||||| ||||||||| ||| |||||||||       ||| ||||||||||| ||||||  ||||||||||||||     
T  10192204 attttaagcttaaaaattcatatgaaaatggacaaaaagggccaaattgaaatgaaaaaaagataaaaggaccaaattgttacctgaaattaagttaagg 10192105  T
Q  124 gactaaaagtataattttgcc 144  Q
    |||||||||| ||||||||||    
T  10192104 gactaaaagtgtaattttgcc 10192084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 133
Target Start/End: Complemental strand, 29421812 - 29421704
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       ||||||||| ||||||||||   |||||||||||||| |    
T  29421812 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggatcaaactgttagctgaaattaagttaaggg 29421713  T
Q  125 actaaaagt 133  Q
    |||||||||    
T  29421712 actaaaagt 29421704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 42950638 - 42950522
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||| ||||| |||||   ||||||||||||||||    
T  42950638 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggtccaaaatgttatctgaaattaagttaagag 42950539  T
Q  125 actaaaagtataatttt 141  Q
    | ||||| |||||||||    
T  42950538 attaaaaatataatttt 42950522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 1479198 - 1479333
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    ||||||||||||||||||||| ||||||||||||            |||||||||||||||||||||| |||||||||         |||||| |||||     
T  1479198 tctatgtttgcataagaatataagatttgaagct------------tgaaaatgaacaaaaaggaccaaattgaaatgaaaaaaaaaataaagaaccaag 1479285  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
     ||||||   ||||||||||||||||||||||||||||||||||||||    
T  1479286 gtgttacctaaaattaagttaagagactaaaagtataattttgccaaa 1479333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 9912012 - 9911912
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn---gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattt 140  Q
    ||||||||||| ||||||||||||| |||||||||          |||||||||||||||||||||  |||||||||||||| |||||||||| ||||||    
T  9912012 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattt 9911913  T
Q  141 t 141  Q
    |    
T  9911912 t 9911912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 11122757 - 11122647
Alignment:
Q  31 agcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaa 130  Q
    ||||| |||||  ||| ||||||| ||||||| ||||| |||||||||        ||||||||||||||||||||  ||||||||||||||||| ||||    
T  11122757 agcttaaaaattcatacgaaaatggacaaaaatgaccaaattgaaatgaaaaatatataaaggaccaaactgttacctgaaattaagttaagagattaaa 11122658  T
Q  131 agtataatttt 141  Q
    | |||||||||    
T  11122657 aatataatttt 11122647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 15461374 - 15461256
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       ||||||||| ||||||| |||  ||||||| |||||| |    
T  15461374 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggatcaaactggtacctgaaattacgttaaggg 15461275  T
Q  125 actaaaagtataattttgc 143  Q
    | ||||||| |||||||||    
T  15461274 attaaaagtgtaattttgc 15461256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 20663914 - 20663970
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    |||||||||||||||||||||  |||||||||||||| |||||||||| ||||||||    
T  20663914 gataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttg 20663970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 31556866 - 31556786
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgtta 105  Q
    |||| |||||| ||||| |||||||||||| ||||||||||||| |||||||||       ||||||||||||||||||||    
T  31556866 attttaagcttaaaaatttatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgtta 31556786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 144
Target Start/End: Original strand, 18449567 - 18449667
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       |||||| ||| ||||||||||  || ||||| |||||  ||||||||| |||||||||    
T  18449567 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaagactaaactgttacctgatattaaattaaggcactaaaagtgtaattttgc 18449666  T
Q  144 c 144  Q
    |    
T  18449667 c 18449667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 19079525 - 19079582
Alignment:
Q  87 ataaaggaccaaactgttac-tagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||||||||||| |||| ||||| |||| |||||||||||||||||||||||||||    
T  19079525 ataaaggaccaaactattacctagaa-ttaaattaagagactaaaagtataattttgcc 19079582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 22486051 - 22485990
Alignment:
Q  87 ataaaggaccaaactgtta-ctagaaattaagttaagagactaaaagtataattttgccaaag 148  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||| | |||||||| |||||    
T  22486051 ataaaggaccaaactgttatcta-aaattaagttaagagactaaaaatgtaattttgtcaaag 22485990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 9253162 - 9253109
Alignment:
Q  94 accaaactgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    |||||||| ||| | |||||||||||||| |||||||| |||||||||||||||    
T  9253162 accaaactattatttgaaattaagttaagggactaaaattataattttgccaaa 9253109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 17549169 - 17549071
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn-gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||||||| ||||||||||||| ||| |||||        |||||||||| ||||||||||  |||||||||||||| |||||||| | |||||||    
T  17549169 atatgaaaatggacaaaaaggaccaaattaaaatgaaaaaaaagataaaggactaaactgttacctgaaattaagttaagggactaaaaatgtaatttt 17549071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 29154258 - 29154376
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||||||||||||||||  ||||| ||||  || |||| ||| | |||||||||       |||||| ||||||||||||||   ||||||||||||| |    
T  29154258 atttgaagcttgaaaattcatatgcaaatagaccaaaaagacaaaattgaaatgaaaaaaagataaaagaccaaactgttacctaaaattaagttaaggg 29154357  T
Q  125 actaaaagtataattttgc 143  Q
    ||||||| | |||||||||    
T  29154358 actaaaattgtaattttgc 29154376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 16403841 - 16403789
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaat 53  Q
    |||||||||| |||||||||||||||||||| ||| |||||  ||||||||||    
T  16403841 tctatgtttgtataagaatattagatttgaaacttcaaaattcatatgaaaat 16403789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 30842241 - 30842289
Alignment:
Q  4 atgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaa 52  Q
    |||||| ||||||||||||||||||||| |||||||||  |||||||||    
T  30842241 atgtttacataagaatattagatttgaaacttgaaaatccatatgaaaa 30842289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 4980700 - 4980641
Alignment:
Q  86 gataaaggaccaaactgtt-actagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||| ||||||||||| ||  |||||||||||||| |||||||||| ||||||||||    
T  4980700 gataaagaaccaaactgtttacatgaaattaagttaagggactaaaagtgtaattttgcc 4980641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 16350861 - 16350912
Alignment:
Q  93 gaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||||| ||||  ||||||||||||| ||||||||| ||||||||||||    
T  16350861 gaccaaactattacctgaaattaagttaaaagactaaaaatataattttgcc 16350912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 1479147 - 1479028
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||  |||||||| | || |||||||||       |||||| ||||||| | ||||  ||||||||||||||      
T  1479147 attttaagcttaaaaattcatatgaaaatagacaaaaagtatcaaattgaaatgaaaaaaagataaatgaccaaattattacctgaaattaagttaagga 1479048  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  1479047 actaaaagtgtaattttgcc 1479028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 13421333 - 13421391
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||||| |||||||||||   ||||||||||||| |||||||||| ||| ||||||    
T  13421333 gataaaggaacaaactgttacctaaaattaagttaagggactaaaagtgtaactttgcc 13421391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 29379838 - 29379781
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    |||||||||| ||| ||||||  |||||||| |||||||||||||| | |||||||||    
T  29379838 gataaaggactaaattgttacctgaaattaaattaagagactaaaaatgtaattttgc 29379781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 33274453 - 33274396
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    |||||| ||| ||||||||||  |||||||||||||| |||||||| | |||||||||    
T  33274453 gataaaagactaaactgttacctgaaattaagttaagggactaaaaatgtaattttgc 33274396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 88)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 2699788 - 2699934
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||       |||||||||||||||    
T  2699788 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaaggaccaaac 2699887  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||  ||||||||||||||||||||||||| ||||||| |||||    
T  2699888 tgttacctgaaattaagttaagagactaaaagtgtaattttaccaaa 2699934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 42391439 - 42391295
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||       |||||||||||||||    
T  42391439 tctatgtttgcataagaatattagatttgaagcttgaaaatgtgtatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 42391340  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcca 145  Q
    ||||||  |||||||||||||| |||||||||| |||||||||||    
T  42391339 tgttacctgaaattaagttaagggactaaaagtgtaattttgcca 42391295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 20121376 - 20121522
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||       |||||||||||||||    
T  20121376 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggatcaaattgaaatgaaaaaaagataaaggaccaaac 20121475  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||  |||||||||||||  |||||||||| |||||||||||||    
T  20121476 tgttacatgaaattaagttaaaggactaaaagtgtaattttgccaaa 20121522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 41857284 - 41857138
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||       |||||||||||||||    
T  41857284 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggatcaaattgaaatgaaaaaaagataaaggaccaaac 41857185  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||  |||||||||||||  |||||||||| |||||||||||||    
T  41857184 tgttacatgaaattaagttaaaggactaaaagtgtaattttgccaaa 41857138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 41922425 - 41922282
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||| |||||||||       |||||||||||||||    
T  41922425 tctatgtttgcataagaatattagatttgaagcttaaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 41922326  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||    
T  41922325 tgttacctgaaattaagttaagggactaaaagtgtaattttgcc 41922282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 45055465 - 45055322
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       ||||||||||||||     
T  45055465 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaat 45055366  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||    
T  45055365 tgttacctgaaattaagttaagggactaaaagtgtaattttgcc 45055322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 7149434 - 7149289
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||       |||||||||||||||    
T  7149434 tctatgtttgcataagaatattagatttgaaacttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 7149335  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    ||||||  |||||||||||||| |||||||||| ||||||| ||||    
T  7149334 tgttacctgaaattaagttaagggactaaaagtgtaattttaccaa 7149289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 38495087 - 38495228
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactg 102  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||       |||||||||||||||||    
T  38495087 tatgtttggataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggactaaattgaaatgaaaaaaagataaaggaccaaactg 38495186  T
Q  103 ttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||  |||||||||||||| |||||||||| ||||||||||    
T  38495187 ttacctgaaattaagttaagggactaaaagtgtaattttgcc 38495228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 24331522 - 24331379
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||||||       |||||||||||||||    
T  24331522 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaatgatcaaattgaaatgaaaaaaagataaaggaccaaac 24331423  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||| | ||||||||||    
T  24331422 tgttacctgaaattaagttaagggactaaaaatgtaattttgcc 24331379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 45062235 - 45062374
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactg 102  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||       |||||||||||||||||    
T  45062235 tatgtttggataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggactaaattgaaatgaaaaaaagataaaggaccaaactg 45062334  T
Q  103 ttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||  |||||||||||||| |||||||||| ||||||||    
T  45062335 ttacctgaaattaagttaagggactaaaagtgtaattttg 45062374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 7173102 - 7173242
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||       ||||||||| |||||    
T  7173102 tctatgtttgcataagaatattaaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggatcaaac 7173201  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  |||||||||||||| || ||||||| |||||||    
T  7173202 tgttacctgaaattaagttaagggattaaaagtgtaatttt 7173242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 8805887 - 8805747
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||||       |||||||||||||||    
T  8805887 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaagaccaaattgaaatgaaaaaaagataaaggaccaaac 8805788  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  |||||||||||||| |||||||| | |||||||    
T  8805787 tgttacctgaaattaagttaagggactaaaaatgtaatttt 8805747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 21733211 - 21733067
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||| ||||||||    
T  21733211 tctatgtttgcataagaatattatattttaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaagaccaaac 21733112  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcca 145  Q
    ||||||  |||||||||||||| |||||| ||| |||||||||||    
T  21733111 tgttacctgaaattaagttaagggactaatagtgtaattttgcca 21733067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 12424016 - 12424157
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||| |||||||||        ||||||||||||||    
T  12424016 tctatgtttgcataagaatattagatttgaagcttgataatgtatatgaaaattgacaaaaaggaccaaattgaaatgaaaaaaaagataaaggaccaaa 12424115  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    |||||||  |||||||||||||| |||||||||| |||||||    
T  12424116 ctgttacctgaaattaagttaagggactaaaagtgtaatttt 12424157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 44457927 - 44457779
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg--nnnnnnngataaaggaccaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||         |||||||||||||    
T  44457927 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggatcaaattgaaatgaaaaaaaaagataaaggaccaa 44457828  T
Q  99 actgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||| ||  |||||||| ||||  ||||||||||||||||||||||||    
T  44457827 actgtaacctgaaattaaattaaaggactaaaagtataattttgccaaa 44457779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 11338063 - 11338203
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| || |||||||||       ||||||||||||||     
T  11338063 tctatgtttgcataagaatattagatttgaagcttgaaaatgtacatgaaaatggacaaaaaggatcaaattgaaatgaaaaaaagataaaggaccaaat 11338162  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  |||||||||||||| |||||||| | |||||||    
T  11338163 tgttacctgaaattaagttaagggactaaaaatgtaatttt 11338203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 34287687 - 34287831
Alignment:
Q  1 tctatgtttgcataagaatattagattt-gaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaa 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| |||||||||       ||||||||||||||    
T  34287687 tctatgtttgcataagaatattagattttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaa 34287786  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
     ||||||  |||||||||||||| |||||||| | ||||||||||    
T  34287787 gtgttacctgaaattaagttaagggactaaaattgtaattttgcc 34287831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 8949435 - 8949309
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||||       |||||||||||||||    
T  8949435 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaaggaccaaac 8949336  T
Q  101 tgttactagaaattaagttaagagact 127  Q
    ||||||  |||||||||||||| ||||    
T  8949335 tgttacctgaaattaagttaagggact 8949309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 45867616 - 45867756
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||||       |||||| ||||||||    
T  45867616 tctatgtttgtataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaagaccaaattgaaatgaaaaaaagataaatgaccaaac 45867715  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  |||||||||||||| || ||||||| |||||||    
T  45867716 tgttacctgaaattaagttaagggattaaaagtgtaatttt 45867756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 41749751 - 41749894
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| ||| |||||       |||||| |||||||     
T  41749751 tctatgtttgcataagaatgttagatttgaagcttgaaaatgtgtatgaaaatggacaaaaaagaccaaattaaaatgaaaaaaagataaatgaccaaat 41749850  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  ||||||||| ||||||||||||| ||||||||||||    
T  41749851 tgttacctgaaattaagctaagagactaaaattataattttgcc 41749894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 17173232 - 17173090
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||        ||||||||||||||    
T  17173232 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggactaaattgaaatgaaaaaaaagataaaggaccaaa 17173133  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||   |||||||||||||| ||| |||| | ||||||||    
T  17173132 ctgttatctgaaattaagttaagggacaaaaattgtaattttg 17173090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 16861013 - 16860908
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||    
T  16861013 tctatgtttgcataagaatattagatttgaaccttgtaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 16860914  T
Q  101 tgttac 106  Q
    ||||||    
T  16860913 tgttac 16860908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 31283297 - 31283192
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||| |||||||||       ||||||||| |||||    
T  31283297 tctatgtttgcataagaatattagatttgaaacttgaaaatgtatatgaaaatggataaaaaggaccaaattgaaatgaaaaaaagataaaggatcaaac 31283198  T
Q  101 tgttac 106  Q
    ||||||    
T  31283197 tgttac 31283192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 29099369 - 29099488
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    ||||||||||||||||||||||| |||||| ||||||||||||| |||||||||        |||||||| |||||||||||  |||||||||||||| |    
T  29099369 atttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaaaataaaggatcaaactgttacctgaaattaagttaaggg 29099468  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  29099469 actaaaagtgtaattttgcc 29099488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 49023749 - 49023826
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||    
T  49023749 tctatgtttgcataagaatattagatttgaaacttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatg 49023826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 146
Target Start/End: Original strand, 44457979 - 44458100
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |    
T  44457979 attttaagcttaaaaattaatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaggg 44458078  T
Q  125 actaaaagtataattttgccaa 146  Q
    ||||||||| ||||||||||||    
T  44458079 actaaaagtgtaattttgccaa 44458100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 19125004 - 19125132
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaact 101  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||| | ||||| ||| | |||||||||        ||||||||||||||||    
T  19125004 tatgtttgcataaaaatattagatttgaaacttgaaaatgtatatgaaaatggataaaaatgactaaattgaaatgaaaaaaaagataaaggaccaaact 19125103  T
Q  102 gttactagaaattaagttaagagactaaa 130  Q
    |||||  |||||||||||||| |||||||    
T  19125104 gttacctgaaattaagttaagggactaaa 19125132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 20121324 - 20121204
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||  |||||||||||||| |    
T  20121324 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccagattgaaatgaaaaaa-gataaaggaccaaactgttacccgaaattaagttaaggg 20121226  T
Q  125 actaaaagtataattttgccaa 146  Q
    ||||||||| ||||||||||||    
T  20121225 actaaaagtgtaattttgccaa 20121204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 146
Target Start/End: Original strand, 41857336 - 41857456
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||  |||||||||||||| |    
T  41857336 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccagattgaaatgaaaaaa-gataaaggaccaaactgttacccgaaattaagttaaggg 41857434  T
Q  125 actaaaagtataattttgccaa 146  Q
    ||||||||| ||||||||||||    
T  41857435 actaaaagtgtaattttgccaa 41857456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 12423964 - 12423845
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |    
T  12423964 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaggg 12423865  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  12423864 actaaaagtgtaattttgcc 12423845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 45867564 - 45867445
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| ||| |||||       |||||||||||||||||||||| |||||||||||||| |    
T  45867564 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattaaaatgaaaaaaagataaaggaccaaactgttacttgaaattaagttaaggg 45867465  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  45867464 actaaaagtgtaattttgcc 45867445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 28588428 - 28588314
Alignment:
Q  33 cttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaag 132  Q
    |||||||||||||||||||||| |||||||||| || |||||||||       |||||| ||||||||||||||  |||||||||||||  |||||||||    
T  28588428 cttgaaaatgtatatgaaaatggacaaaaaggatcaaattgaaatgaaaaaaagataaaagaccaaactgttacctgaaattaagttaaaggactaaaag 28588329  T
Q  133 tataattttgccaaa 147  Q
    | |||||||||||||    
T  28588328 tgtaattttgccaaa 28588314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 8522506 - 8522623
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaactgttactagaaattaagttaaga 123  Q
    ||||||||||||||||||||| |||||||| ||||||||||||| |||||||||        |||||||||||||| ||||||  ||||||||||||||     
T  8522506 atttgaagcttgaaaatgtatgtgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagataaaggaccaaattgttacctgaaattaagttaagg 8522605  T
Q  124 gactaaaagtataatttt 141  Q
    |||||||||| |||||||    
T  8522606 gactaaaagtgtaatttt 8522623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 144
Target Start/End: Original strand, 45055536 - 45055636
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |||||||||| |||||||||    
T  45055536 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 45055635  T
Q  144 c 144  Q
    |    
T  45055636 c 45055636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 46426832 - 46426936
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||  |||| |||||||||       |||||||||| ||||    
T  46426832 tctatgtttgcataagaatattagatttgaagattgaaaatgtatataaaaatggacaaaaaaaaccaaattgaaatgaaaaaaagataaaggactaaac 46426931  T
Q  101 tgtta 105  Q
    |||||    
T  46426932 tgtta 46426936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 38495033 - 38494914
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |    
T  38495033 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaggg 38494934  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||| ||||||    
T  38494933 actaaaagtgtaactttgcc 38494914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 11338011 - 11337889
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||| ||||||  |||||||||||||  |    
T  11338011 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaattgttacatgaaattaagttaaagg 11337912  T
Q  125 actaaaagtataattttgccaaa 147  Q
    ||||||||| |||||||||||||    
T  11337911 actaaaagtgtaattttgccaaa 11337889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 8805958 - 8806055
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |||||||||| |||||||    
T  8805958 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 8806055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 31813849 - 31813728
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||| ||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |    
T  31813849 attttaagcttaaaaattcatatgaaaatggacaaaaaagaccaaattgaaatgagaaaaagataaaggaccaaactgttacctgaaattaagttaaggg 31813750  T
Q  125 actaaaagtataattttgccaa 146  Q
    | ||||||| ||||||||||||    
T  31813749 attaaaagtgtaattttgccaa 31813728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 47221878 - 47222012
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||| |||||||||||||||||||||||||||||||            |||||||||||||| ||| |||||       |||||||||||||||    
T  47221878 tctatgtttgtataagaatattagatttgaagcttgaaaatg------------aacaaaaaggaccaaattaaaatgaaaaaaagataaaggaccaaac 47221965  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||  ||||||||||||||  ||||||||| |||||||||||||    
T  47221966 tgttacctgaaattaagttaaggaactaaaagtgtaattttgccaaa 47222012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 11682093 - 11682231
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||| || || ||| ||||        ||||||| || |||     
T  11682093 tctatgtttgcataagaatattagatttgaaacttgaaaatatatatgaaaatggacaaaaaagatcaaattaaaat-aaaaaaagataaagaactaaat 11682191  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    |||||   |||||||||||||| ||||||||||||||||||    
T  11682192 tgttatctgaaattaagttaag-gactaaaagtataatttt 11682231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 23036820 - 23036948
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaact 101  Q
    |||||||||||||||||||||||||| |||||||||||||||||  |||||| | ||||||||||| ||| |||||        ||||||||||||||||    
T  23036820 tatgtttgcataagaatattagatttaaagcttgaaaatgtataataaaatggataaaaaggaccaaattaaaatgaaaaaaaagataaaggaccaaact 23036919  T
Q  102 gttactagaaattaagttaagagactaaa 130  Q
    ||||   |||||||| ||||| |||||||    
T  23036920 gttatctgaaattaaattaagggactaaa 23036948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 46738435 - 46738502
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggacca 68  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||| |||||    
T  46738435 tctatgtttgcataagaatattagatttgaagcttgaaaatgcatataaaaatggacaaaaatgacca 46738502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 48766029 - 48766173
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||| ||| ||||||||||||||||||||||| | ||||| |||||||||||| || |||||||| | ||||||||        |||||||||| ||||    
T  48766029 tctatttttacataagaatattagatttgaagcgtaaaaatctatatgaaaatggaccaaaaggacaaaattgaaattaaaaaaagataaaggactaaac 48766128  T
Q  101 tg-ttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    || || | | ||||||||||||| |||||||||| ||||||||||    
T  48766129 tgtttcccataaattaagttaagggactaaaagtgtaattttgcc 48766173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 7149486 - 7149605
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||| ||||| |||||||||       |||||| |||||||||||||   ||||||||||||||||    
T  7149486 attttaagcttaaaaattcatatgaaaatggacaaaaaagaccaaattgaaatgaaaaaaagataaatgaccaaactgttatctgaaattaagttaagag 7149585  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  7149586 actaaaagtgtaattttgcc 7149605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 34287635 - 34287516
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||| ||||| |||||||||       |||||||||||||||||||||   |||||||||||||||    
T  34287635 attttaagcttaaaaattcatatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctaaaattaagttaagag 34287536  T
Q  125 actaaaagtataattttgcc 144  Q
    | ||||||| ||||||||||    
T  34287535 agtaaaagtgtaattttgcc 34287516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 42391510 - 42391613
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       |||| ||||||||||||||||  ||||| |||||||| |||||||||| |||||||||    
T  42391510 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagatagaggaccaaactgttacctgaaatcaagttaagggactaaaagtgtaattttgc 42391609  T
Q  144 caaa 147  Q
    ||||    
T  42391610 caaa 42391613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 47221826 - 47221707
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||| ||||||||||||||  |||||||||||||| |    
T  47221826 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaatgaccaaactgttacctgaaattaagttaaggg 47221727  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||| | ||||||||||    
T  47221726 actaaaaatgtaattttgcc 47221707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 144
Target Start/End: Original strand, 21455754 - 21455868
Alignment:
Q  30 aagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaa 129  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||       |||||||||||||| ||||||   ||||||| |||||  |||||    
T  21455754 aagcttaaaaatgtatatgaaaatgaacaaaaagaaccaaattgaaatgaaaaaaagataaaggaccaaattgttacctaaaattaaattaaggaactaa 21455853  T
Q  130 aagtataattttgcc 144  Q
    |||| ||||||||||    
T  21455854 aagtgtaattttgcc 21455868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 140
Target Start/End: Complemental strand, 21627052 - 21626938
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||||||||||||||| ||||||||||||| ||| |||||       ||||||| |||||||||||||   |||||||||||| ||    
T  21627052 attttaagcttaaaaatgtatatgaaaatggacaaaaaggaccaaattaaaatgaaaaaa-gataaagaaccaaactgttacctaaaattaagttaaaag 21626954  T
Q  125 actaaaagtataattt 140  Q
    ||||||||||||||||    
T  21626953 actaaaagtataattt 21626938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31813901 - 31813978
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||  | ||||| ||||| |||||||||    
T  31813901 tctatgtttgcataagaatattagatttgaagcttgaaaatatatataaaaattgataaaaatgaccaaattgaaatg 31813978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 49114442 - 49114588
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaat----gnnnnnnngataaaggacc 96  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||| |||||| | ||||| ||||| ||| ||||            |||||||||||    
T  49114442 tctatgtttgcataagaatgttagatttgaagcttgaaaatgcatataaaaatggataaaaatgaccaaattaaaattaaaaaaaaaaagataaaggacc 49114541  T
Q  97 aaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||  |||||||| ||||| || ||||||| |||||||||    
T  49114542 aaactgttacctgaaattaaattaagggagtaaaagtgtaattttgc 49114588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 23036766 - 23036647
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||||||||||||||  ||||||||||||| |||||||||       |||||| ||| ||||||||||   ||||||||||||| |    
T  23036766 attttaagcttaaaaatgtatatgaaaatagacaaaaaggaccaaattgaaatgaaaaaaagataaaagactaaactgttacctaaaattaagttaaggg 23036667  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||| | ||||||||||    
T  23036666 actaaaattgtaattttgcc 23036647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 19104444 - 19104590
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||  |  |||| ||||| ||||||||        | ||||||| |||      
T  19104444 tctatgtttgcataagaatataagatttgaagcttgaaaatgtatttgaaaatagatgaaaaagaccaaattgaaatcaaaaaaagctaaaggatcaagt 19104543  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||  |||||||||||||  |||| ||| | |||||||||||||    
T  19104544 tgttacctgaaattaagttaaaggactgaaaatgtaattttgccaaa 19104590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 19124950 - 19124828
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||||||||||||||| | ||||||||||| |||||||||       ||||||||| |||| ||||||   || |||||||||| |    
T  19124950 attttaagcttaaaaatgtatatgaaaatggataaaaaggaccaaattgaaatgaaaaaaagataaaggatcaaattgttacctaaacttaagttaaggg 19124851  T
Q  125 actaaaagtataattttgccaaa 147  Q
    | ||||||| |||||||||||||    
T  19124850 attaaaagtgtaattttgccaaa 19124828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31115969 - 31116021
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaat 53  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  31115969 tctatgtttgcataagaatattatatttgaagcttgaaaatgtatataaaaat 31116021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 130
Target Start/End: Complemental strand, 45062181 - 45062076
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| ||||| |||||||||||| ||||||||| ||| |||||||||       |||||||||||||||||||||  |||||||||||||  |    
T  45062181 attttaagcttaaaaatttatatgaaaatggacaaaaagggccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaagg 45062082  T
Q  125 actaaa 130  Q
    ||||||    
T  45062081 actaaa 45062076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 49023678 - 49023577
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn-gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||||||| ||||||||||||| |||||||||        |||||||||||||||||||||  |||||||||||||| |||||||| | ||||||||    
T  49023678 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaaatgtaattttg 49023579  T
Q  143 cc 144  Q
    ||    
T  49023578 cc 49023577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 31283367 - 31283470
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||  ||||||| || || |||||||||       |||||||||||||||||||||   ||||||||||||| |||||||||| |||||||||    
T  31283367 atatgaaaatagacaaaaatgatcaaattgaaatgaaaaaaagataaaggaccaaactgttacataaaattaagttaagggactaaaagtgtaattttgc 31283466  T
Q  144 caaa 147  Q
    ||||    
T  31283467 caaa 31283470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 32165362 - 32165288
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaat 77  Q
    |||||||| |||||||||| ||||||||| ||||||||||||| |||||||| ||||||| || || ||||||||    
T  32165362 tatgtttgaataagaatataagatttgaaacttgaaaatgtatttgaaaatggacaaaaatgatcaaattgaaat 32165288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 145
Target Start/End: Original strand, 24331574 - 24331695
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn-gataaaggaccaaactgttactagaaattaagttaaga 123  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||        |||||||||||||| | |||   ||||||||||||||     
T  24331574 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagataaaggaccaaattattatctgaaattaagttaagg 24331673  T
Q  124 gactaaaagtataattttgcca 145  Q
    |||||||||| |||||||||||    
T  24331674 gactaaaagtgtaattttgcca 24331695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 144
Target Start/End: Original strand, 21733282 - 21733382
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||| ||||| |||||||||       |||||||||| ||| ||||||  |||||||||||||||||||| || | |||||||||    
T  21733282 atatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaaggacgaaattgttacctgaaattaagttaagagactataaatgtaattttgc 21733381  T
Q  144 c 144  Q
    |    
T  21733382 c 21733382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 46426775 - 46426663
Alignment:
Q  30 aagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaa 129  Q
    |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||| ||||||   ||||||||||||  || |||    
T  46426775 aagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaattgttacctaaaattaagttaaaggattaa 46426676  T
Q  130 aagtataattttg 142  Q
    |||| ||||||||    
T  46426675 aagtgtaattttg 46426663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 8522382 - 8522324
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||||||||| ||||||  |||||||||||||| |||||||||| ||||||||||    
T  8522382 gataaaggaccaaaatgttacctgaaattaagttaagggactaaaagtgtaattttgcc 8522324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 43575306 - 43575364
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||||||||| ||||||  |||||||||||||| |||||||||| ||||||||||    
T  43575306 gataaaggaccaaaatgttacctgaaattaagttaagggactaaaagtgtaattttgcc 43575364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 21455640 - 21455579
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    |||||||||||||||||||||  |||||||| ||||| |||||||||| ||||| |||||||    
T  21455640 gataaaggaccaaactgttacctgaaattaaattaagggactaaaagtgtaattgtgccaaa 21455579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 41922496 - 41922594
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||||||| ||||||| ||||| |||||||||       ||||||  |||||| ||||||  ||||||||||||||| ||||||||| ||||||||    
T  41922496 atatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaacaaccaaattgttacatgaaattaagttaagacactaaaagtgtaattttg 41922594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 43575162 - 43575064
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||||||| ||||||||||||| |||||| ||       |||||| ||||||||||||||  |||||||||||||| ||||| || | ||||||||    
T  43575162 atatgaaaatggacaaaaaggaccaaattgaattgaaaaaaagataaatgaccaaactgttacctgaaattaagttaagggactataaatgtaattttg 43575064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 43575233 - 43575273
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaat 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  43575233 tctatgtttgcataagaatattatatttgaagcttgaaaat 43575273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 145
Target Start/End: Complemental strand, 46738383 - 46738263
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||  ||||| |||||||||       ||||||| |||||||||||||  |||||||||||||  |    
T  46738383 attttaagctttaaaattcatatgaaaatggacaaaatagaccaaattgaaatgaaaaaaagataaagaaccaaactgttacctgaaattaagttaaagg 46738284  T
Q  125 actaaaagtataattttgcca 145  Q
    ||||||| | |||||| ||||    
T  46738283 actaaaaatgtaatttagcca 46738263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14792954 - 14793000
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatat 47  Q
    ||||||||||||||| |||||||| |||||||||||||||| |||||    
T  14792954 tctatgtttgcataaaaatattagttttgaagcttgaaaatatatat 14793000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15239944 - 15239990
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatat 47  Q
    ||||||||||||||| |||||||| |||||||||||||||| |||||    
T  15239944 tctatgtttgcataaaaatattagttttgaagcttgaaaatatatat 15239990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 21555949 - 21555891
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||||| ||||||||||  |||||||||||||| |||||||| | ||||||||||    
T  21555949 gataaaggactaaactgttacctgaaattaagttaagggactaaaaatgtaattttgcc 21555891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 27551955 - 27551897
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||||||||||||||| | |||||||| ||||| |||||||| | ||||||||||    
T  27551955 gataaaggaccaaactgttatttgaaattaaattaagggactaaaactttaattttgcc 27551897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 41054768 - 41054829
Alignment:
Q  4 atgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaagga 65  Q
    ||||||||||||||||||||||||| ||||| ||||||  |||| |||||| || |||||||    
T  41054768 atgtttgcataagaatattagatttaaagctcgaaaattcatataaaaatggaccaaaagga 41054829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 10543606 - 10543711
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||||||||||||||||  |||| |||||| || |||||||| | |||||||||       ||||||||| |||||||||||   |||| |||||||| |    
T  10543606 atttgaagcttgaaaatccatataaaaatggaccaaaaggacaaaattgaaatgagaaaaagataaaggatcaaactgttacctaaaataaagttaaggg 10543705  T
Q  125 actaaa 130  Q
    ||||||    
T  10543706 actaaa 10543711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32064533 - 32064493
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaat 41  Q
    ||||||||| ||||||||||||||||| |||||||||||||    
T  32064533 tctatgtttacataagaatattagattggaagcttgaaaat 32064493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 32072107 - 32072071
Alignment:
Q  17 aatattagatttgaagcttgaaaatgtatatgaaaat 53  Q
    ||||||||||||||||||||||||| |||||||||||    
T  32072107 aatattagatttgaagcttgaaaatttatatgaaaat 32072071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 43268101 - 43268153
Alignment:
Q  2 ctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatg 54  Q
    |||| |||||||||||||||||||||| ||||||||||||  |||| ||||||    
T  43268101 ctatatttgcataagaatattagatttaaagcttgaaaatcgatataaaaatg 43268153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 43699980 - 43699925
Alignment:
Q  86 gataaaggaccaaactgtta-ctagaaattaagttaagagactaaaagtataatttt 141  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||||    
T  43699980 gataaaggaccaaactgttatcta-aaattaagttaagggactaaaagtgtaatttt 43699925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 49114396 - 49114279
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  |||| |||||| ||||||| ||||| ||||||||        |||||||||| ||||||||||  |||||||||||||  |    
T  49114396 attttaagcttaaaaattcatataaaaatggacaaaaaagaccaaattgaaataaaaaaaagataaaggacaaaactgttacctgaaattaagttaaatg 49114297  T
Q  125 actaaaagtataattttg 142  Q
    | ||||||| ||||||||    
T  49114296 attaaaagtgtaattttg 49114279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 19104321 - 19104274
Alignment:
Q  97 aaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||||||  ||||||||||||| |||||||| ||||||||||||    
T  19104321 aaactgttacttaaaattaagttaagggactaaaaatataattttgcc 19104274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 31116049 - 31116100
Alignment:
Q  93 gaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||||||||||  |||||||||||||  |||||||| ||||||||||||    
T  31116049 gaccaaactgttacctgaaattaagttaatggactaaaaatataattttgcc 31116100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 141
Target Start/End: Complemental strand, 41749687 - 41749583
Alignment:
Q  37 aaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtata 136  Q
    ||||||||||| |||||||||||||||||||| ||| |||||       ||||||||| |||| | ||||   ||||||| ||||| || ||||| ||||    
T  41749687 aaaatgtatataaaaatgaacaaaaaggaccaaattaaaatgaaaaaaagataaaggatcaaattattacctaaaattaaattaagggattaaaaatata 41749588  T
Q  137 atttt 141  Q
    |||||    
T  41749587 atttt 41749583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 21455697 - 21455667
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaa 31  Q
    |||||||||||||||||||||||||||||||    
T  21455697 tctatgtttgcataagaatattagatttgaa 21455667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 31115888 - 31115839
Alignment:
Q  93 gaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||| ||||||  |||||||||||||| |||||||||| ||||||||    
T  31115888 gaccaaattgttacctgaaattaagttaagggactaaaagtgtaattttg 31115839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 32072202 - 32072263
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    |||||||||| ||| |||||| | ||||||||||||| || ||| | |||||||||||||||    
T  32072202 gataaaggacgaaattgttaccaaaaattaagttaagggattaatattataattttgccaaa 32072263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 145
Target Start/End: Original strand, 31813997 - 31814033
Alignment:
Q  109 gaaattaagttaagagactaaaagtataattttgcca 145  Q
    |||||||||||||| |||||||||| |||||||||||    
T  31813997 gaaattaagttaagggactaaaagtgtaattttgcca 31814033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 16020100 - 16019957
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||       ||||||||| |||||    
T  16020100 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggatcaaac 16020001  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||    
T  16020000 tgttacctgaaattaagttaagggactaaaagtgtaattttgcc 16019957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 17362469 - 17362610
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||       || ||||||||||||    
T  17362469 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgagaaaaagacaaaggaccaaac 17362568  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||| |||||||||||||  |||||||||| ||||||||    
T  17362569 tgttacttgaaattaagttaaaggactaaaagtgtaattttg 17362610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 52538050 - 52538194
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| || |||||||||       |||||||||||||||    
T  52538050 tctatgtttgcataagaatattagatttgaagcttgaaaatgtgtatgaaaatggacaaaaaggatcaaattgaaatgaaaaaaagataaaggaccaaac 52538149  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcca 145  Q
    ||||||  |||||||||||||| |||||||||| |||||||||||    
T  52538150 tgttacctgaaattaagttaagggactaaaagtgtaattttgcca 52538194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 52654103 - 52654246
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||       |||||||||||||||    
T  52654103 tctatgtttgcataagaatataagatttgaagcttgaaaatgtatttgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 52654202  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||    
T  52654203 tgttacctgaaattaagttaagggactaaaagtgtaattttgcc 52654246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 7 - 144
Target Start/End: Original strand, 20984091 - 20984228
Alignment:
Q  7 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttac 106  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||    
T  20984091 tttgcataagaatattaaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttac 20984190  T
Q  107 tagaaattaagttaagagactaaaagtataattttgcc 144  Q
      |||||||||||||| |||||||||| ||||||||||    
T  20984191 ctgaaattaagttaagggactaaaagtgtaattttgcc 20984228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 32922210 - 32922065
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| || |||||||||       |||||| ||||||||    
T  32922210 tctatgtttgcataagaatattagatttgaagcttgaaaatgtgtatgaaaatggacaaaaaggatcaaattgaaatgaaaaaaagataaatgaccaaac 32922111  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||||    
T  32922110 tgttacctgaaattaagttaagggactaaaagtgtaattttgccaa 32922065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 26842943 - 26842803
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||       ||||||| |||||||    
T  26842943 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaagaaccaaac 26842844  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  ||||||||||||||  ||||||||| |||||||    
T  26842843 tgttacctgaaattaagttaaggaactaaaagtgtaatttt 26842803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 41376727 - 41376584
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| | |||||||||       |||||||||||||||    
T  41376727 tctatgtttgcataagaatattagatttgaagtttgaaaatgtatatgaaaatggacaaaaaggacaaaattgaaatgaaaaacagataaaggaccaaac 41376628  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    | ||||  |||||||||||||| |||||||||| ||||||||||    
T  41376627 tattacctgaaattaagttaagggactaaaagtgtaattttgcc 41376584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 7067413 - 7067554
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| || |||||||||       ||||||||| |||||    
T  7067413 tctatgtttgcataagaatattagatttgaagcttgaaaatgtgtatgaaaatggacaaaaaggatcaaattgaaatgaaaaaaagataaaggatcaaac 7067512  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||  |||||||||||||| |||||||||| ||||||||    
T  7067513 tgttacctgaaattaagttaagggactaaaagtgtaattttg 7067554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 41935636 - 41935496
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| |||||       ||||||||||| |||    
T  41935636 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattaaaatgaaaaaaagataaaggaccgaac 41935537  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  ||||||||||||||||||||||| | |||||||    
T  41935536 tgttacctgaaattaagttaagagactaaaaatgtaatttt 41935496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 10993768 - 10993625
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       ||||||||||||||     
T  10993768 tctatgtttgcataaaaatattatatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaat 10993669  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||    
T  10993668 tgttacctgaaattaagttaagggactaaaagtgtaattttgcc 10993625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 26886781 - 26886924
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||| || || |||||||||       |||||||||||||||    
T  26886781 tctatgtttacataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaagatcaaattgaaatgaaaaaaagataaaggaccaaac 26886880  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||| |||||||||||||| |||||||| | ||||||||||    
T  26886881 tgttacttgaaattaagttaagggactaaaaatgtaattttgcc 26886924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 46689328 - 46689467
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| || |||||||||       |||||||||| ||||    
T  46689328 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatacgaaaatggacaaaaaggatcaaattgaaatgaaaaaaagataaaggacgaaac 46689427  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattt 140  Q
    ||||||  ||||||||||||||| ||||||||| ||||||    
T  46689428 tgttacctgaaattaagttaagaaactaaaagtgtaattt 46689467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 45655864 - 45656009
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||       |||||| ||||||||    
T  45655864 tctatgtttgcataagaatataagatttgaagcttgaaaatgtatttgaaaatggacaaaaaggaccaaattgaaatg-aaaaaagataaatgaccaaac 45655962  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||   ||||||||||||| |||||||||| |||||||||||||    
T  45655963 tgttacctaaaattaagttaagggactaaaagtgtaattttgccaaa 45656009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 22539858 - 22540001
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||        |||||||||  |||    
T  22539858 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagataaaggattaaa 22539957  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
     ||||||| |||||||||||||| |||||||||| ||||||||||    
T  22539958 ttgttact-gaaattaagttaagggactaaaagtgtaattttgcc 22540001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 18568196 - 18568340
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||        |||||||||||||     
T  18568196 tctatgtttgcataagaatataagatttgaagcttgaaaatgtatttgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagataaaggaccaag 18568295  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||  ||||||||||||||  ||||||||| ||||||||||    
T  18568296 ctgttacctgaaattaagttaaggaactaaaagtgtaattttgcc 18568340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 31857752 - 31857896
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||||||||| ||||||||||| | |||||||||       ||||||| |||||||    
T  31857752 tctatgtttgcataataatatttaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggactaaattgaaatgaaaaaaagataaagaaccaaac 31857851  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcca 145  Q
    ||||||  ||||||||||||||  ||||||||| |||||||||||    
T  31857852 tgttacctgaaattaagttaaggaactaaaagtgtaattttgcca 31857896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 43264242 - 43264386
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||       |||||||||| ||||    
T  43264242 tctatatttgcataagagtattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaagaccaaattgaaatgaaaaaaagataaaggacaaaac 43264341  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcca 145  Q
    ||||||  |||||||||||||  |||||||| | |||||||||||    
T  43264342 tgttacctgaaattaagttaaaggactaaaaatgtaattttgcca 43264386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 15516448 - 15516306
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| || |||||||||       |||||||||||||||    
T  15516448 tctatgtttgcattagaatattag-tttgaagcttgaaaatgtatatgaaaatggacaaaaaggagcaaattgaaatggaaaaaagataaaggaccaaac 15516350  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    | ||||  |||||||||||||  |||||||||| ||||||||||    
T  15516349 tattacctgaaattaagttaacggactaaaagtgtaattttgcc 15516306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 9902838 - 9902972
Alignment:
Q  12 ataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaa 111  Q
    |||| ||||||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||||       |||||||||||||||||||||  |||    
T  9902838 ataataatattagatttgaagcttgaaaatgtatataaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaa 9902937  T
Q  112 attaagttaagagactaaaagtataattttgccaa 146  Q
    ||||||||||| || ||||||| ||||||||||||    
T  9902938 attaagttaagggattaaaagtgtaattttgccaa 9902972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 38556085 - 38555943
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||| | |||||||| || |||||||||       ||||||||| |||||    
T  38556085 tctatgtttgtataataatattagatttgaagcttgaaaatgtatatgaaaatggataaaaaggatcaaattgaaatgaaaaaaagataaaggatcaaac 38555986  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    |||||   |||||||||||||| |||||||||| |||||||||    
T  38555985 tgttatctgaaattaagttaagggactaaaagtgtaattttgc 38555943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 49387354 - 49387496
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||  |||||||||||||||| ||||||||||||||||||||  | ||||||||||| ||| |||||       |||||||||||||||    
T  49387354 tctatgtttgcatagcaatattagatttgaagtttgaaaatgtatatgaaaatagataaaaaggaccaaattaaaatgaaaaaa-gataaaggaccaaac 49387452  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||||||||||||||||    
T  49387453 tgttacctgaaattaagttaagggactaaaagtataattttgcc 49387496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 35130939 - 35130790
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-----nnnnnnngataaaggac 95  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||| |||||||||            ||||||||||    
T  35130939 tctatgtttgcataagaatattagatttgaagtttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaaaaaaagataaaggac 35130840  T
Q  96 caaactgttactagaaattaagttaagagactaaaagtataattttgcca 145  Q
    |||||||||||  |||||||||||||| || ||||||| |||||||||||    
T  35130839 caaactgttacctgaaattaagttaagggattaaaagtgtaattttgcca 35130790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 16530454 - 16530318
Alignment:
Q  8 ttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttact 107  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||   |||||||||       |||||| ||||||| ||||||     
T  16530454 ttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggactcaattgaaatgaaaaaaagataaatgaccaaattgttacc 16530355  T
Q  108 agaaattaagttaagagactaaaagtataattttgcc 144  Q
     |||||||||||||| |||||||||| ||||||||||    
T  16530354 tgaaattaagttaagggactaaaagtgtaattttgcc 16530318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 44551058 - 44550907
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg------nnnnnnngataaagga 94  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||              ||||||||    
T  44551058 tctatgtttgtataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaaaataaaaataaagga 44550959  T
Q  95 ccaaactgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    ||||||||||||  |||||||||||||| |||||||||| ||||||||||||    
T  44550958 ccaaactgttacatgaaattaagttaagggactaaaagtgtaattttgccaa 44550907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 23572772 - 23572912
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||| |||||       |||||| ||||||||    
T  23572772 tctatgtttgcataagaatatttaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattaaaatgagaaaaagataaatgaccaaac 23572871  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    | || |   ||||||||||||| |||||||||| |||||||    
T  23572872 tattgcctaaaattaagttaagggactaaaagtgtaatttt 23572912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 32488755 - 32488898
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||  || |||||||||       |||||| ||||||||    
T  32488755 tctatgtttgcataagaatatttaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggtacaaattgaaatgaaaaaaagataaaagaccaaac 32488854  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    | ||||  |||||||||||||  ||||||| || ||||||||||    
T  32488855 tattacctgaaattaagttaaaggactaaacgtgtaattttgcc 32488898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 24270533 - 24270675
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || | ||||||||        |||||| ||| ||||    
T  24270533 tctatgtttgcataagaatattagattcgaagcttgaaaatgtatatgaaaatggacaaaaagaacaaaattgaaatcgaaaaaagataaaagacgaaac 24270632  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    | ||||  |||||||||||  | |||||||||||||||||||||    
T  24270633 tattacctgaaattaagtt-tgggactaaaagtataattttgcc 24270675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 25331988 - 25332065
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| |||||    
T  25331988 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattaaaatg 25332065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26948135 - 26948058
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| |||||||||    
T  26948135 tctatgtttgcataagaatattatatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatg 26948058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 30637089 - 30636949
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||| ||||| || |||||||| | ||||||||        ||| |||||||||||    
T  30637089 tctatgtttacataagaatattagatttgaagcttgaaaatccatatg-aaatggaccaaaaggacaaaattgaaattaaaaaaagattaaggaccaaac 30636991  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||| |||||||||||||| |||| ||||| ||||||||    
T  30636990 tgttacttgaaattaagttaagggactcaaagtgtaattttg 30636949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 36868205 - 36868346
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactg 102  Q
    ||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||| ||||| ||||||||        |||||| ||||||||      
T  36868205 tatgtttgcataaaaatattaaatttgaagcttggaaatgtatatgaaaatgaacaaaaatgaccaaattgaaataaaaaaaagataaatgaccaaacat 36868304  T
Q  103 ttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||   ||||||||||||||  ||||||| ||||||||||||    
T  36868305 ttatctgaaattaagttaaggaactaaaaatataattttgcc 36868346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37068784 - 37068861
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| || || |||||||||    
T  37068784 tctatgtttgcataagaatattagatttgaaacttgaaaatgtatatgaaaatggacaaaaatgatcaaattgaaatg 37068861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 54036983 - 54036866
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    ||||||||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||||| ||||  |||||||||||||| |    
T  54036983 atttgaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactattacctgaaattaagttaaggg 54036884  T
Q  125 actaaaagtataattttg 142  Q
    ||||||||| ||||||||    
T  54036883 actaaaagtgtaattttg 54036866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 144
Target Start/End: Original strand, 32922281 - 32922381
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |||||||||| |||||||||    
T  32922281 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 32922380  T
Q  144 c 144  Q
    |    
T  32922381 c 32922381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 39792088 - 39792235
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg--nnnnnnngataaaggaccaa 98  Q
    ||||||||||||||| ||||||||||||||||||| |||||||| ||||||||| ||||||| || || ||| |||||         |||||||||||||    
T  39792088 tctatgtttgcataaaaatattagatttgaagcttaaaaatgtacatgaaaatggacaaaaatgatcaaatttaaatgaaaaaaaaagataaaggaccaa 39792187  T
Q  99 actgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    | ||||||  |||||||||||||| |||||||| | ||||||| ||||    
T  39792188 attgttacctgaaattaagttaagggactaaaaatgtaattttaccaa 39792235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 53563266 - 53563122
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||  | |||||||||| ||||| ||||||  ||||| |||||||| |||| ||| | |||||||||       |||||||||||||||    
T  53563266 tctatgtttgcatataattattagatttaaagctcgaaaatccatatgcaaatgaaccaaaaagacaaaattgaaatgaaaaaaagataaaggaccaaac 53563167  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    ||||||| | |||||||||||  |||||||||| ||||||||||||    
T  53563166 tgttacttgcaattaagttaa-tgactaaaagtgtaattttgccaa 53563122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 9902753 - 9902653
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||  ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |||||||||| |||||||||    
T  9902753 atatgaaaattgacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 9902654  T
Q  144 c 144  Q
    |    
T  9902653 c 9902653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 143
Target Start/End: Original strand, 35131010 - 35131109
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| || ||||||| |||||||||    
T  35131010 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggattaaaagtgtaattttgc 35131109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 39792036 - 39791917
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||| ||||||  |||||||||||||  |    
T  39792036 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaattgttacctgaaattaagttaaagg 39791937  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  39791936 actaaaagtgtaattttgcc 39791917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 45801389 - 45801462
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaa 75  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||||| ||||||    
T  45801389 tctatgtttgcataagaatattagatttgaagtctgaaaatgtatataaaaatgaac-aaaaggaccaaattgaa 45801462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 147
Target Start/End: Complemental strand, 52537979 - 52537876
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| ||| |||||       |||||||||||||||||||||  |||||||||||||| |||||||||| ||||||| |    
T  52537979 atatgaaaatggacaaaaaggaccaaattaaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttac 52537880  T
Q  144 caaa 147  Q
    ||||    
T  52537879 caaa 52537876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 26843000 - 26843110
Alignment:
Q  31 agcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaa 130  Q
    ||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||  |||||||    
T  26843000 agcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaaggactaaa 26843099  T
Q  131 agtataatttt 141  Q
    ||| |||||||    
T  26843100 agtgtaatttt 26843110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32188085 - 32188162
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | ||||| ||||| ||| |||||    
T  32188085 tctatgtttgcataagaatattagatttgaaacttgaaaatgtatataaaaatggataaaaatgaccaaattaaaatg 32188162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 44551129 - 44551227
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||||||| ||||||||||| | |||||||||       |||||||||||||||||||||  |||||||||||||| |||||||||| ||||||||    
T  44551129 atatgaaaatggacaaaaaggactaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttg 44551227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 5747994 - 5747877
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||| ||||| |    
T  5747994 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaaattaaggg 5747895  T
Q  125 actaaaagtataattttg 142  Q
    ||||||| | ||||||||    
T  5747894 actaaaaatgtaattttg 5747877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 16530513 - 16530630
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||        |||||  || ||||||||||| |||||||||||||| |    
T  16530513 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaagaataaaaaactaaactgttacttgaaattaagttaaggg 16530612  T
Q  125 actaaaagtataattttg 142  Q
    ||||||||||||||||||    
T  16530613 actaaaagtataattttg 16530630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 145
Target Start/End: Complemental strand, 52654051 - 52653930
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn-gataaaggaccaaactgttactagaaattaagttaaga 123  Q
    |||| |||||| |||||  |||| |||||| ||||||||||||| |||||||||        |||||||||||||||||||||  ||||||||||||||     
T  52654051 attttaagcttaaaaattcatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagataaaggaccaaactgttacctgaaattaagttaagg 52653952  T
Q  124 gactaaaagtataattttgcca 145  Q
    |||||||||| |||||||||||    
T  52653951 gactaaaagtgtaattttgcca 52653930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 45801277 - 45801219
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||    
T  45801277 gataaaggaccaaactgttacctgaaattaaattaagagactaaaagtataattttgcc 45801219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 18568144 - 18568024
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn-gataaaggaccaaactgttactagaaattaagttaaga 123  Q
    |||| |||||| |||||  ||||||||||||||||||| ||||| ||||||||         ||||||||||||||||||||   |||||||||||||||    
T  18568144 attttaagcttaaaaattcatatgaaaatgaacaaaaaagaccaaattgaaataaaaaaaaagataaaggaccaaactgttatctgaaattaagttaaga 18568045  T
Q  124 gactaaaagtataattttgcc 144  Q
    || ||||||| ||||||||||    
T  18568044 gattaaaagtgtaattttgcc 18568024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 146
Target Start/End: Complemental strand, 17362399 - 17362296
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn-gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||||||| ||||||| ||||| |||||||||        ||||||||||||||||||||   |||||||||||||| |||||||||| ||||||||    
T  17362399 atatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaaagataaaggaccaaactgttatccgaaattaagttaagggactaaaagtgtaattttg 17362300  T
Q  143 ccaa 146  Q
    ||||    
T  17362299 ccaa 17362296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 26886729 - 26886613
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| | |||||||| || |||||||||       |||||||||||||||| |||   |||||||||||||| |    
T  26886729 attttaagcttaaaaattcatatgaaaatggagaaaaaggaacaaattgaaatgaaaataagataaaggaccaaactattatctgaaattaagttaaggg 26886630  T
Q  125 actaaaagtataatttt 141  Q
    ||||||| |||||||||    
T  26886629 actaaaaatataatttt 26886613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 145
Target Start/End: Original strand, 26948198 - 26948300
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn-gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||||||| ||||||||||||  |||||||||        ||||||| |||||| ||||||  |||||||||||||| |||||||| ||||||||||    
T  26948198 atatgaaaatggacaaaaaggacccaattgaaatgaaaaaaaagataaagcaccaaaatgttacctgaaattaagttaagggactaaaaatataattttg 26948297  T
Q  143 cca 145  Q
    |||    
T  26948298 cca 26948300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44835144 - 44835185
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatg 42  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  44835144 tctatgtttgcataaaaatattagatttgaagcttgaaaatg 44835185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 36868132 - 36868032
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||  ||||||||||||| |||||||||       ||||||||||||||||||||   |||||||| |||||  ||||||| | |||||||||    
T  36868132 atatgaaaatagacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttatctgaaattaaattaaggaactaaaaatgtaattttgc 36868033  T
Q  144 c 144  Q
    |    
T  36868032 c 36868032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 37068733 - 37068666
Alignment:
Q  96 caaactgttactagaaattaagttaagagactaaaagtataattttgccaaagctaaattaactaaat 163  Q
    |||||||||||   ||||||||||||| |||||||||| |||||||||||||   |||||||||||||    
T  37068733 caaactgttacctaaaattaagttaagggactaaaagtgtaattttgccaaataaaaattaactaaat 37068666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 15516500 - 15516619
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||  ||||||||||||| ||| |||||        ||||||||| ||| ||||||  |||||||||||||| |    
T  15516500 attttaagcttaaaaattcatatgaaaatcgacaaaaaggaccaaattcaaatgaataaaaaataaaggactaaattgttacctgaaattaagttaaggg 15516599  T
Q  125 actaaaagtataattttgcc 144  Q
    || |||||| ||||||||||    
T  15516600 acaaaaagtgtaattttgcc 15516619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 25331917 - 25331815
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnnga--taaaggaccaaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||||||| ||||||||||||| |||||||||        |  ||||||| |||| ||||||  |||||||||||||| |||||||||| |||||||    
T  25331917 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaaaaataaaggatcaaattgttacctgaaattaagttaagggactaaaagtgtaatttt 25331818  T
Q  142 gcc 144  Q
    |||    
T  25331817 gcc 25331815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 46648240 - 46648274
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagctt 35  Q
    |||||||||||||||||||||||||||||||||||    
T  46648240 tctatgtttgcataagaatattagatttgaagctt 46648274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 5748046 - 5748087
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatg 42  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  5748046 tctatgtttgcataagaatataagatttgaagtttgaaaatg 5748087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 41376779 - 41376896
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgtta-ctagaaattaagttaaga 123  Q
    |||| |||||| ||||| |||||||||||| ||||||| || || |||||||||       ||||||| |||||||||||| ||| ||||||||||||      
T  41376779 attttaagcttaaaaatatatatgaaaatggacaaaaatgatcaaattgaaatgaaaaaaagataaagaaccaaactgttatcta-aaattaagttaatg 41376877  T
Q  124 gactaaaagtataattttg 142  Q
    ||||||||||  |||||||    
T  41376878 gactaaaagtgaaattttg 41376896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 46674786 - 46674839
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    |||| |||||| ||||| ||||||||||||||| |||||||||| |||||||||    
T  46674786 attttaagcttaaaaatatatatgaaaatgaaccaaaaggaccaaattgaaatg 46674839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18636011 - 18636051
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaat 41  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  18636011 tctatgtttgtataagaatattagatttgaaacttgaaaat 18636051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 44038209 - 44038149
Alignment:
Q  86 gataaaggaccaaactgttactagaaa-ttaagttaagagactaaaagtataattttgcca 145  Q
    |||||| ||||||||||||||| |||| ||||||||||||||||||| | | |||||||||    
T  44038209 gataaaagaccaaactgttacttgaaaattaagttaagagactaaaaatgtgattttgcca 44038149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 45655751 - 45655695
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    |||||| ||| ||| ||||||  ||||||||||||||||||||||||| ||||||||    
T  45655751 gataaaagacaaaattgttacctgaaattaagttaagagactaaaagtgtaattttg 45655695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 5748080 - 5748176
Alignment:
Q  47 tgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    |||||||| ||||||||||||| |||||||||       ||||||| ||||| ||||||   ||||||||||||||  | ||||||| |||||||||    
T  5748080 tgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaagtaccaagctgttatctgaaattaagttaaggaattaaaagtgtaattttgc 5748176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 44835036 - 44834981
Alignment:
Q  87 ataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    |||||| |||||||||||||  |||||||||||||| || ||||||| ||||||||    
T  44835036 ataaagaaccaaactgttacctgaaattaagttaagggattaaaagtgtaattttg 44834981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 46648169 - 46648069
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||  |||||||||| || |||||||||       |||||||||||||| ||||||  |||||||||||||| |  |||| || |||||||||    
T  46648169 atatgaaaatagacaaaaaggatcaaattgaaatgaaaaaaagataaaggaccaaattgttacctgaaattaagttaaggggttaaaggtgtaattttgc 46648070  T
Q  144 c 144  Q
    |    
T  46648069 c 46648069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 49498614 - 49498661
Alignment:
Q  8 ttgcataagaatatta-gatttgaagcttgaaaatgtatatgaaaatg 54  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||||    
T  49498614 ttgcataagaatattaagatttgaagcttgaaaattcatatgaaaatg 49498661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 5618291 - 5618438
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn-gataaaggaccaaa 99  Q
    |||||||||||| || ||||||||||||||| ||||||||   |||| |||||  || |||| ||| | ||||||||         ||||||| | ||||    
T  5618291 tctatgtttgcagaataatattagatttgaaacttgaaaactcatataaaaatagaccaaaaagacaaaattgaaattaaaaaaaagataaagtatcaaa 5618390  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
     ||||||  |||||||| |||||||||||||| ||||||| |||||||    
T  5618391 ttgttacctgaaattaaattaagagactaaaaatataattctgccaaa 5618438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 8358545 - 8358583
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaat 41  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  8358545 tatgtttgcatatgaatcttagatttgaagcttgaaaat 8358583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 41944161 - 41944211
Alignment:
Q  94 accaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||||||||  |||||||||||||| |||||||| | ||||||||||    
T  41944161 accaaactgttacctgaaattaagttaagggactaaaaatgtaattttgcc 41944211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 9644935 - 9644980
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatg 48  Q
    ||||||||||||||||||||| |||| |||||| |||||| |||||    
T  9644935 tatgtttgcataagaatattatatttaaagcttaaaaatgcatatg 9644980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23962990 - 23962937
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatg 54  Q
    ||||||||||||||| |||||||||| |||| ||||||| | | ||||||||||    
T  23962990 tctatgtttgcataacaatattagatctgaaacttgaaattttttatgaaaatg 23962937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 50512746 - 50512803
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    |||||| ||| ||| ||||||| ||||||||||||| ||||||||| | |||||||||    
T  50512746 gataaatgacaaaattgttacttgaaattaagttaaaagactaaaattgtaattttgc 50512803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 54997000 - 54996951
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaa 50  Q
    |||||||||| |||||||||||| ||||||| |||||||||  |||||||    
T  54997000 tctatgtttgaataagaatattatatttgaaacttgaaaatccatatgaa 54996951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 43781352 - 43781384
Alignment:
Q  111 aattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||||||| |||||||||||||||||    
T  43781352 aattaagttaagagattaaaagtataattttgc 43781384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 46648279 - 46648335
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    |||||| || |||||||||||  |||||||||||||| |||||||| | ||||||||    
T  46648279 gataaatgatcaaactgttacctgaaattaagttaagggactaaaaatgtaattttg 46648335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 46674734 - 46674682
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaat 53  Q
    |||||||||| ||||||||||||||||| ||  || |||||||||| ||||||    
T  46674734 tctatgtttgtataagaatattagatttaaaatttaaaaatgtataagaaaat 46674682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 6e-46; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 27712935 - 27713081
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||    
T  27712935 tctatgtttgcataagaatatttaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 27713034  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||  |||||||||||||| |||||||||| |||||||||||||    
T  27713035 tgttacctgaaattaagttaagggactaaaagtgtaattttgccaaa 27713081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 8156879 - 8157022
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| |||||||||       |||||||||||||||    
T  8156879 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatacgaaaatggacaaaaaagaccaaattgaaatgaaaaaaagataaaggaccaaac 8156978  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  ||||||||||||||  ||||||| ||||||||||||    
T  8156979 tgttacctgaaattaagttaaggaactaaaaatataattttgcc 8157022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 26938329 - 26938186
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||       ||||||||||||||     
T  26938329 tctatgtttgtataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaaggaccaaat 26938230  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||| ||||||||||||    
T  26938229 tgttacctgaaattaagttaagggactaaaattataattttgcc 26938186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 36556706 - 36556849
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       |||||||||||||||    
T  36556706 tctatgtttacataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 36556805  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||| | ||||||||||    
T  36556806 tgttacctgaaattaagttaagggactaaaaatgtaattttgcc 36556849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 33279107 - 33279252
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccaga--ttgaaatgnnnnnnngataaaggaccaa 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |  ||||||||       |||||||||||||    
T  33279107 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattttgaaatgaaaaaaagataaaggaccaa 33279206  T
Q  99 actgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||||  |||||||||||||| |||||||||| ||||||||||    
T  33279207 actgttacctgaaattaagttaagggactaaaagtgtaattttgcc 33279252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 30253769 - 30253628
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||| ||||||||    
T  30253769 tctatgtttgcataagaatatttaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaatgaccaaac 30253670  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||  |||||||||||||| |||||||||| ||||||||    
T  30253669 tgttacctgaaattaagttaagggactaaaagtgtaattttg 30253628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 34632396 - 34632536
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||    
T  34632396 tctatgtttgcataaaaatattaaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 34632495  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  |||||||||||||| |||||||| | |||||||    
T  34632496 tgttacctgaaattaagttaagggactaaaaatgtaatttt 34632536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 148436 - 148293
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||       ||||||||||||||     
T  148436 tctatgtttgcataagaatattaaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaat 148337  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||   ||||||||||||| ||| |||||| ||||||||||    
T  148336 tgttacctaaaattaagttaagggaccaaaagtgtaattttgcc 148293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 34198978 - 34198835
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||    
T  34198978 tctatgtttgcataagaatattaaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaattgataaaggaccaaac 34198879  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||   ||||||| | ||||||||||    
T  34198878 tgttacctgaaattaagttaaagaactaaaaatgtaattttgcc 34198835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 28828359 - 28828218
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||||||| ||||| ||||||| |||||||||       ||||||||||||||     
T  28828359 tctatgtttgcataagaatatttaatttgaagcttgaaaatatatatgaaaatggacaaacaggaccaaattgaaatgaaaaaaagataaaggaccaaat 28828260  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||| |||||||||||||| |||||||||| ||||||||    
T  28828259 tgttacttgaaattaagttaagggactaaaagtgtaattttg 28828218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 39198760 - 39198615
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg--nnnnnnngataaaggaccaa 98  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||| |||||||||         | |||||||||||    
T  39198760 tctatgtttgcataagaatattagatttgaagcttgaaaatgtgtatgaaaatggacaaaaaagaccaaattgaaatgaaaaaaaaaggtaaaggaccaa 39198661  T
Q  99 actgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||||  |||||||||||||| |||||||||| ||||||||||    
T  39198660 actgttacctgaaattaagttaagggactaaaagtgtaattttgcc 39198615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 10925243 - 10925100
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactg 102  Q
    ||||||||||||||||||||  | |||||||||||||||||||||||||||  ||||||||||||| ||| |||||       |||||||||||||||||    
T  10925243 tatgtttgcataagaatattt-agttgaagcttgaaaatgtatatgaaaatagacaaaaaggaccaaattaaaatgaaaaaaagataaaggaccaaactg 10925145  T
Q  103 ttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||| ||||||||||||||| ||||||| | |||||||||||||    
T  10925144 ttacttgaaattaagttaagaaactaaaaatgtaattttgccaaa 10925100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 21660870 - 21660726
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaat-gnnnnnnngataaaggaccaaa 99  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||||||||| ||||||| ||||| |||||||| |       ||||||||||||||    
T  21660870 tctatgtttgcataagaatatttaatttgaagcttaaaaatgtatatgaaaatggacaaaaaagaccaaattgaaatagaaaaaaagataaaggaccaaa 21660771  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||  |||||||||||||| |||||||||| ||||||||||    
T  21660770 ctgttacctgaaattaagttaagggactaaaagtgtaattttgcc 21660726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 30464085 - 30464225
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||| |||||       ||||||||| |||||    
T  30464085 tctatgtttgcataagaatatttaatttgaagcttgaaaatgtatatgaaaatgcacaaaaaggaccaaattcaaatgaaaaaaagataaaggatcaaac 30464184  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||| | |||||||||||||  |||||||||| |||||||    
T  30464185 tgttatttgaaattaagttaaaggactaaaagtgtaatttt 30464225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 40277365 - 40277237
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||| ||||| |||||||||       |||||||||||||||    
T  40277365 tctatgtttgcataagtatattagacttgaagcttgaaaatgtatatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaaggaccaaac 40277266  T
Q  101 tgttactagaaattaagttaagagactaa 129  Q
    | ||||  |||||||||||||||||||||    
T  40277265 tattacctgaaattaagttaagagactaa 40277237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 42684931 - 42684787
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||| ||||| |||||||||        ||||||| ||||||    
T  42684931 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaattgacaaaaatgaccaaattgaaatgaaaaaaaagataaagaaccaaa 42684832  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||  |||||||||||||| |||||||||| ||||||||||    
T  42684831 ctgttacctgaaattaagttaagggactaaaagtgtaattttgcc 42684787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 41617211 - 41617351
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||| ||| |||||       |||||||||||||||    
T  41617211 tctatgtttgcataagaatattagatttgaaacttgaaaatgtatataaaaatggacaaaaatgaccaaattaaaatgaaaaaaagataaaggaccaaac 41617310  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  |||||||||||||| | |||||| | |||||||    
T  41617311 tgttacctgaaattaagttaaggggctaaaaatgtaatttt 41617351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 4968153 - 4968024
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||  |||| |||||||||||||||| |||||||| ||||||||||||| |||||||||       |||||||||  |||     
T  4968153 tctatgtttgcataagaatatttaatttaaagcttgaaaatgtatgtgaaaatggacaaaaaggaccatattgaaatgaaaaaaagataaaggaataaat 4968054  T
Q  101 tgttactagaaattaagttaagagactaaa 130  Q
    |||||| ||||||||||||||| |||||||    
T  4968053 tgttaccagaaattaagttaagggactaaa 4968024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 9887306 - 9887435
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||  |||| |||||||||||||||| |||||||| ||||||||||||| |||||||||       |||||||||  |||     
T  9887306 tctatgtttgcataagaatatttaatttaaagcttgaaaatgtatgtgaaaatggacaaaaaggaccatattgaaatgaaaaaaagataaaggaataaat 9887405  T
Q  101 tgttactagaaattaagttaagagactaaa 130  Q
    |||||| ||||||||||||||| |||||||    
T  9887406 tgttaccagaaattaagttaagggactaaa 9887435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 26187299 - 26187444
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||| |  ||||||||||||||  ||||||||||| || |||||||| | |||||||||       |||||||||||||||    
T  26187299 tctatgtttgcataagaatattaaaaatgaagcttgaaaatccatatgaaaatggaccaaaaggacaaaattgaaatgaaaaaaagataaaggaccaaac 26187398  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    ||||||  |||||||||||||  |||||||| | ||||||||||||    
T  26187399 tgttacctgaaattaagttaacggactaaaattgtaattttgccaa 26187444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 33527083 - 33526942
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||  ||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| | |||||||||       |||||| ||||||||    
T  33527083 tctatgtttgtttaagaatattatatttgatgcttgaaaatgtatatgaaaatggacaaaaaggacaaaattgaaatgaaaaaaagataaaagaccaaac 33526984  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    |||||   |||||||||||||| |||||||| | ||||||||    
T  33526983 tgttatctgaaattaagttaagggactaaaaatgtaattttg 33526942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 29596573 - 29596716
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||| ||| ||||        ||||||||||||||     
T  29596573 tctatgtttgcataagaatattagatttaaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattaaaataaaaaaaagataaaggaccaaaa 29596672  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    | |||   |||||||| ||||  |||||||| ||||||||||||    
T  29596673 tattatctgaaattaaattaaaggactaaaaatataattttgcc 29596716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 43497350 - 43497208
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||||||||  || |||||||||| ||| ||||        ||||||||| ||||     
T  43497350 tctatgtttgcataagaatatcatatttgaagcttgaaaatctatatgaaaatcgaccaaaaggaccaaattaaaattaaaaaaagataaaggatcaaat 43497251  T
Q  101 tgtta-ctagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||||    
T  43497250 tgttatcta-aaattaagttaagggactaaaagtataattttgc 43497208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 29596521 - 29596403
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |    
T  29596521 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaggg 29596422  T
Q  125 actaaaagtataattttgc 143  Q
    ||||||||| |||||||||    
T  29596421 actaaaagtgtaattttgc 29596403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 8156808 - 8156712
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||||||| ||||||||||||| |||||||||       ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  8156808 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaa-gataaaggatcaaactgttacttgaaattaagttaagagactaaaagtataatttt 8156712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 18805918 - 18806056
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactg 102  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||| ||  |||||       || |||| |||||| ||    
T  18805918 tatgtttgcataagaatattagatttgaagtttgaaaatgtatatgaaaatggataaaaaagaccaaatgaaaatgaaaaaaagacaaagaaccaaattg 18806017  T
Q  103 ttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||   ||||||||| ||| |||||||||| |||||||    
T  18806018 ttacctaaaattaagtaaagggactaaaagtgtaatttt 18806056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 34199049 - 34199152
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||   ||||||||||||| |||| ||||| |||||||||    
T  34199049 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctaaaattaagttaagggactgaaagtgtaattttgc 34199148  T
Q  144 caaa 147  Q
    ||||    
T  34199149 caaa 34199152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 1235755 - 1235880
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||| ||| ||||||| |||||  || |||||       ||||||| |||||||    
T  1235755 tctatgtttgcataagaatatttaatttgaagcttgaaaatgtatatgaagatggacaaaaatgaccaagttaaaatg-aaaaaagataaagaaccaaac 1235853  T
Q  101 tgttactagaaattaagttaagagact 127  Q
    | ||||  |||||||||||||| ||||    
T  1235854 tattacctgaaattaagttaagggact 1235880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 42684983 - 42685099
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||| ||||| |||||||||       |||||||||||||| |||||||  |||||||||||||||    
T  42684983 attttaagcttaaaaattcatatgaaaatggacaaaaaagaccaaattgaaatgaaaaaaagataaaggaccaaattgttacttaaaattaagttaagag 42685082  T
Q  125 actaaaagtataatttt 141  Q
    ||||||||  |||||||    
T  42685083 actaaaagagtaatttt 42685099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 33279055 - 33278932
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatg-aacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaaga 123  Q
    |||| |||||| |||||  ||||||||||| || ||||||||||| |||||||||       | |||| ||||||| ||||||  |||||||||||||||    
T  33279055 attttaagcttaaaaattcatatgaaaatggaaaaaaaaggaccaaattgaaatgaaaaaaaggtaaaagaccaaattgttacctgaaattaagttaaga 33278956  T
Q  124 gactaaaagtataattttgccaaa 147  Q
    |||||||||| |||||||||||||    
T  33278955 gactaaaagtgtaattttgccaaa 33278932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38229781 - 38229858
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    |||||||||| ||||||||||||||||| ||||||||||||  |||| |||||| ||||||||||| | |||||||||    
T  38229781 tctatgtttgtataagaatattagattttaagcttgaaaatccatataaaaatggacaaaaaggacaaaattgaaatg 38229858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 12649623 - 12649571
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaat 53  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  12649623 tctatgtttgcataagaatattagatttgaagcttgaaaatccatatgaaaat 12649571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 145
Target Start/End: Complemental strand, 41617148 - 41617047
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||| ||||| ||| |||||       ||||||| ||||||||||||   ||||||||||||||||||||||||| |||||||||    
T  41617148 atatgaaaatggacaaaaatgaccaaattaaaatgaaaaaaagataaagaaccaaactgttatctgaaattaagttaagagactaaaagtgtaattttgc 41617049  T
Q  144 ca 145  Q
    ||    
T  41617048 ca 41617047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 2241643 - 2241789
Alignment:
Q  1 tctatgtttgcataagaatattag---atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggacca 97  Q
    ||||||||||||||  ||||||||   ||||| || ||||||||  ||||| ||||| || |||||||| | |||||||||       ||||||||||||    
T  2241643 tctatgtttgcatagaaatattagtagatttgtaggttgaaaattcatatgcaaatggaccaaaaggacaaaattgaaatgaaaaaaagataaaggacca 2241742  T
Q  98 aactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||||  | || ||||||||| |||||||||| ||||||||||    
T  2241743 aactgttacatggaactaagttaagggactaaaagtgtaattttgcc 2241789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 18929871 - 18929932
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaag 63  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||||||||||| ||||||||    
T  18929871 tctatgtttgtataagaat-ttagatttgaaacttgaaaatgtatatgaaaatggacaaaaag 18929932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 24419613 - 24419756
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||| ||||||||||||||||||||| ||||||||  |||| |||||| || |||| ||| | |||||||||        |||||||| ||||     
T  24419613 tctatgtttgtataagaatattagatttgaagtttgaaaatccatataaaaatggactaaaatgacaaaattgaaatgaaaaaaaaataaaggatcaaat 24419712  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    | ||||   ||||||||||||| || ||||| ||||||||||||    
T  24419713 tattacctaaaattaagttaagggattaaaaatataattttgcc 24419756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 144
Target Start/End: Original strand, 39198831 - 39198930
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| |||| |||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| || ||||||| |||||||||    
T  39198831 atatgaaaatggacaataaggaccaaattgaaatgaaaaaa-gataaaggaccaaactgttacctgaaattaagttaagggattaaaagtgtaattttgc 39198929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 18805865 - 18805748
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| | ||||| ||||| |||||||||       |||||||||||||||||||||  ||||||||||||||      
T  18805865 attttaagcttaaaaattcatatgaaaatggataaaaatgaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagga 18805766  T
Q  125 actaaaagtataattttg 142  Q
    ||||||| | ||||||||    
T  18805765 actaaaaatgtaattttg 18805748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 148484 - 148576
Alignment:
Q  49 aaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    |||||| ||||||||||||| |||||||||       |||||||||| ||||||||||  |||||||||||||| |||||||| | |||||||    
T  148484 aaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggactaaactgttacctgaaattaagttaagggactaaaaatgtaatttt 148576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 2241590 - 2241471
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||||||||||||||||  ||| | ||||| || |||||||| | | |||||||       |||||||||||||||| ||||  |||||||||||||| |    
T  2241590 atttgaagcttgaaaatccatacgcaaatggaccaaaaggacaaaactgaaatgaagaaaagataaaggaccaaactattacctgaaattaagttaaggg 2241491  T
Q  125 actaaaagtataattttgcc 144  Q
    |||||||||  |||||||||    
T  2241490 actaaaagtgaaattttgcc 2241471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 18929800 - 18929702
Alignment:
Q  46 atgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||||  ||||||||||||| |||||||||       |||||||||||| |||||||   |||||||||||||| ||||||| || ||||||||||    
T  18929800 atgaaaatagacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccatactgttatctgaaattaagttaagggactaaatgtgtaattttgcc 18929702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 26938381 - 26938496
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| ||| |||||||||||||| ||||||| ||||| |||||||||        ||||||||| ||| ||||||   ||||||||||||| |    
T  26938381 attttaagcttaaaactgtatatgaaaatggacaaaaatgaccaaattgaaatgaaaaaa--ataaaggactaaattgttacctaaaattaagttaaggg 26938478  T
Q  125 actaaaagtataattttg 142  Q
    ||||||||| ||||||||    
T  26938479 actaaaagtgtaattttg 26938496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 140
Target Start/End: Original strand, 17494918 - 17495033
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  |||| |||||| | ||||| ||||| |||||||||       |||||| ||||||| ||||||  |||||||||||||| |    
T  17494918 attttaagcttaaaaattcatataaaaatggataaaaatgaccaaattgaaatgaaaaaaagataaatgaccaaaatgttacctgaaattaagttaaggg 17495017  T
Q  125 actaaaagtataattt 140  Q
    ||||||||| ||||||    
T  17495018 actaaaagtgtaattt 17495033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 17494866 - 17494825
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatg 42  Q
    ||||||||||||||||||||| |||||| |||||||||||||    
T  17494866 tctatgtttgcataagaatataagatttaaagcttgaaaatg 17494825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 30253882 - 30253943
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    |||||||||| ||||||||||   |||| |||||||| |||||||||| |||||||||||||    
T  30253882 gataaaggactaaactgttacctaaaataaagttaagggactaaaagtgtaattttgccaaa 30253943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37727370 - 37727411
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatg 42  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  37727370 tctatgtttgcataagaatatttaatttgaagcttgaaaatg 37727411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 40277485 - 40277546
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    |||||| ||||||||| ||||   ||||||||||||| |||||||||| |||||||||||||    
T  40277485 gataaaagaccaaactattacctaaaattaagttaagtgactaaaagtgtaattttgccaaa 40277546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 37727404 - 37727505
Alignment:
Q  47 tgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn-gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcca 145  Q
    |||||||| ||||||||||||| |||||||||        || ||||||||||| ||||||  |||||||| ||||| |||||||| | |||||||||||    
T  37727404 tgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagacaaaggaccaaattgttacctgaaattaaattaagggactaaaattgtaattttgcca 37727503  T
Q  146 aa 147  Q
    ||    
T  37727504 aa 37727505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 34213443 - 34213388
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    |||||||||||||||||||||   |||| |||||||| |||||||||| |||||||    
T  34213443 gataaaggaccaaactgttacctaaaataaagttaagggactaaaagtgtaatttt 34213388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 17494819 - 17494765
Alignment:
Q  89 aaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| |||| |  |||||||||||||| |||||||||| |||||||||    
T  17494819 aaaggaccaaattgtttcctgaaattaagttaagggactaaaagtgtaattttgc 17494765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 29726722 - 29726775
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||    
T  29726722 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatg 29726775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 40277417 - 40277470
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    |||| |||||| ||||||||||||||||||||| |||| ||||| ||| |||||    
T  40277417 attttaagcttaaaaatgtatatgaaaatgaacgaaaatgaccaaattaaaatg 40277470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 6e-46; HSPs: 83)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 40934589 - 40934735
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||       ||||||||||||||     
T  40934589 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaat 40934688  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||  |||||||||||||| |||||||||| ||||||| |||||    
T  40934689 tgttacctgaaattaagttaagggactaaaagtgtaattttaccaaa 40934735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 32694481 - 32694622
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactg 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||||    
T  32694481 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactg 32694580  T
Q  103 ttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||  ||||||||||||||||||||||| | ||| ||||||    
T  32694581 ttacctgaaattaagttaagagactaaaaatgtaaatttgcc 32694622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 9877574 - 9877718
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||       ||||||||||||||     
T  9877574 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacataaaggaccaaattgaaatgaaaaaaagataaaggaccaaat 9877673  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcca 145  Q
    ||||||  |||||||||||||| |||||||| |||||||||||||    
T  9877674 tgttacctgaaattaagttaagggactaaaaatataattttgcca 9877718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 5586658 - 5586801
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||| ||||||||    
T  5586658 tctatgtttgcataagaatattaaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaatgaccaaac 5586757  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||    
T  5586758 tgttacctgaaattaagttaagggactaaaagtgtaattttgcc 5586801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 12650063 - 12649924
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactg 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       |||||||||||||||||    
T  12650063 tatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactg 12649964  T
Q  103 ttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||  |||||||||||||| |||||||||| ||||||||    
T  12649963 ttacctgaaattaagttaagggactaaaagtgtaattttg 12649924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4695107 - 4695252
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||| |||||||||       |||||||||||||||    
T  4695107 tctatgtttgcataagaatattagatttgaaacttgaaaatgtatataaaaatagacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 4695206  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||||    
T  4695207 tgttacctgaaattaagttaagggactaaaagtgtaattttgccaa 4695252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 26095660 - 26095803
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggac-caaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||||| | ||||    
T  26095660 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggcctcaaa 26095759  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    |||||||  |||||||||||||| |||||||||| |||||||||    
T  26095760 ctgttacctgaaattaagttaagggactaaaagtgtaattttgc 26095803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 33471582 - 33471725
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||||       |||||||||| ||||    
T  33471582 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaaggacaaaac 33471681  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||| |||| ||| |||||||||||||||| ||||||||||    
T  33471682 tgttacttgaaaataaattaagagactaaaagtgtaattttgcc 33471725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 28554333 - 28554187
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||| ||| ||||||||  |||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||    
T  28554333 tctatgtttacatgagaatatttaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 28554234  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||  |||||||||||||| |||||||||| |||||||||||||    
T  28554233 tgttacctgaaattaagttaagggactaaaagtgtaattttgccaaa 28554187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 5618212 - 5618071
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactg 102  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||| |||||       |||||||||||||||||    
T  5618212 tatgtttggataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggactaaattaaaatgaaaaaaagataaaggaccaaactg 5618113  T
Q  103 ttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||  |||||||||||||| |||||||||| ||||||||||    
T  5618112 ttacctgaaattaagttaagggactaaaagtgtaattttgcc 5618071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 34480325 - 34480184
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactg 102  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||||||| ||||||||||||| |||||||||       |||||||||||||||||    
T  34480325 tatgtttgcataagaatatttaatttgaagcttgaaattgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactg 34480226  T
Q  103 ttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||  |||||||||||||| |||||||||| ||||||||||    
T  34480225 ttacctgaaattaagttaagggactaaaagtgtaattttgcc 34480184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 1501662 - 1501522
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||  |||| |||||||||       |||||||||||||||    
T  1501662 tctatgtttgcataagaatattagatttgaagcttgaaaatgcatataaaaatggacaaaaaaaaccaaattgaaatgaaaaaaagataaaggaccaaac 1501563  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||| |||||||||||||| |||||||||| |||||||    
T  1501562 tgttacttgaaattaagttaagggactaaaagtgtaatttt 1501522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 8853238 - 8853093
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||| | |||||||||       |||||| ||||||||    
T  8853238 tctatgtttacataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaagaaggactaaattgaaatgaaaaaaagataaa-gaccaaac 8853140  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||  |||||||||||||| |||||||||| |||||||||||||    
T  8853139 tgttacctgaaattaagttaagggactaaaagtgtaattttgccaaa 8853093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 39672979 - 39672833
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||| |||||| | ||||||||||| |||||||||       |||||||||| ||||    
T  39672979 tctatgtttgcataaaaatattagatttgaaacttgaaaatgtatataaaaatggataaaaaggaccaaattgaaatgaaaaaaagataaaggactaaac 39672880  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||  |||||||||||||| |||||||||| |||||||||||||    
T  39672879 tgttacctgaaattaagttaagggactaaaagtgtaattttgccaaa 39672833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 6489015 - 6488871
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| |||||||||        |||||| |||||||    
T  6489015 tctatgtttgcataagaatatttaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagataaatgaccaaa 6488916  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||  |||||||||||||| |||||||||| ||||||||||    
T  6488915 ctgttacctgaaattaagttaagggactaaaagtgtaattttgcc 6488871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 40770311 - 40770451
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||       ||||||||||||||     
T  40770311 tctatgtttgcataagagtataagatttgaagcttgaaaatgtatttgaaaatgaacaaaaatgaccaaattgaaatgaaaaaaagataaaggaccaaat 40770410  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  |||||||||||||| |||||||||| |||||||    
T  40770411 tgttacctgaaattaagttaagggactaaaagtgtaatttt 40770451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 8641203 - 8641301
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgccaaagctaaattaactaaattaaagttaaaaacttatctct 184  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  8641203 gataaaggaccaaactgttacttgaaattaagttaagggactaaaagtgtaattttaccaaagttaaattaactaaattaaagttaaaaacttatctct 8641301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 25012819 - 25012961
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||       |||||| ||||||||    
T  25012819 tctatgtttgcgtaaaaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattaaaatgaaaaaaagataaa-gaccaaac 25012917  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||    
T  25012918 tgttacctgaaattaagttaagggactaaaagtgtaattttgcc 25012961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 27065284 - 27065145
Alignment:
Q  5 tgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgtt 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||  || |||||       |||||||||||||||||||    
T  27065284 tgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaagaccaagttcaaatgaaaaaaagataaaggaccaaactgtt 27065185  T
Q  105 actagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||  |||||||||||||| |||||||| | ||||||||||    
T  27065184 acatgaaattaagttaagggactaaaaatgtaattttgcc 27065145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 49021837 - 49021980
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       |||||| ||||||||    
T  49021837 tctatatttgcattagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaatgaccaaac 49021936  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| ||| |||||| ||||||||||    
T  49021937 tgttacctgaaattaagttaagggacaaaaagtgtaattttgcc 49021980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 45286403 - 45286549
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||| ||||| |||||||||       ||||||||| |||||    
T  45286403 tctatgtttgcataagaatattagatttgaagcttaaaaatgtatataaaaatggacaaaaaagaccaaattgaaatgaaaaaaagataaaggatcaaac 45286502  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    |||||   ||||||||||||||  ||||||| |||||||||||||||    
T  45286503 tgttatctgaaattaagttaaggaactaaaaatataattttgccaaa 45286549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 48524634 - 48524489
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| |||||| |||||||||| || |||||||||       |||||||||||||||    
T  48524634 tctatgtttgcataaaaatattagatttgaagattgaaaatgtatataaaaatggacaaaaaggatcaaattgaaatgaaaaaaagataaaggaccaaac 48524535  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    |||||   |||||||||||||| |||||||||| |||| |||||||    
T  48524534 tgttaactgaaattaagttaagggactaaaagtgtaatcttgccaa 48524489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 10296735 - 10296603
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| || || |||||||||       |||||| ||||||||    
T  10296735 tctatgtttgcataagaatattagatttgaagcttgaaaatgcatatgaaaatggacaaaaatgatcaaattgaaatgaaaaaaagataaaagaccaaac 10296636  T
Q  101 tgttactagaaattaagttaagagactaaaagt 133  Q
    ||||||  |||||||||||||| ||||||||||    
T  10296635 tgttacctgaaattaagttaagggactaaaagt 10296603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 44344167 - 44344023
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||        |||||||||||||     
T  44344167 tctatgtttgcataagaatataagatttgaagcttgaaaatgtatttgaaaatgaacaaaaaagaccaaattgaaatgaaaaaaaagataaaggaccaat 44344068  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
     ||||||  |||||||||||||| |||||||||| ||||||||||    
T  44344067 ttgttacctgaaattaagttaagggactaaaagtgtaattttgcc 44344023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 730942 - 730799
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||| |||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||       |||||||||| ||      
T  730942 tctatgtttgtataagaatataagatttgaagcttgaaaatgtatttgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggactaagt 730843  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||    
T  730842 tgttacctgaaattaagttaagggactaaaagtgtaattttgcc 730799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 46283573 - 46283716
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| | |||||||||        |||||||| |||||    
T  46283573 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggactaaattgaaatgaaaaaaatataaaggatcaaac 46283672  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||   |||||||| ||||| |||||||||| ||||||||||    
T  46283673 tgttatctgaaattaaattaagggactaaaagtgtaattttgcc 46283716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 150 - 260
Target Start/End: Original strand, 8641954 - 8642065
Alignment:
Q  150 taaattaactaaattaaagttaaaaacttatctctaacttttaggtgttattttg-nnnnnnnnctctgcgttatctctatagctccaagagaaatgaaa 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||         ||||||||||||||||| ||||||||||||||||||    
T  8641954 taaattaactaaattaaagttaaaaacttatctctaacttttaggtgtttttttgttttttttcctctgcgttatctctatggctccaagagaaatgaaa 8642053  T
Q  249 tccttccctaac 260  Q
    ||||||||||||    
T  8642054 tccttccctaac 8642065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 16515805 - 16515945
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||| |||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||| || |||||||||       ||||||| |||||||    
T  16515805 tctatatttgcatacgaatattagatttgaaccttgaaaatgtatatgaaaatggacaaaaaggatcaaattgaaatgaaaaaaagataaagaaccaaac 16515904  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  |||||||||||||| |||||||| | |||||||    
T  16515905 tgttacctgaaattaagttaagggactaaaaatgtaatttt 16515945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 143
Target Start/End: Complemental strand, 8641087 - 8640948
Alignment:
Q  2 ctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaact 101  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||       |||||| |||||||||    
T  8641087 ctatgttttcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaagaaccaaattgaaatg-aaaaaagataaa-gaccaaact 8640990  T
Q  102 gttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||   ||||| || ||||| |||||||||| |||||||||    
T  8640989 gttatctgaaatcaaattaagggactaaaagtgtaattttgc 8640948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 48970873 - 48971008
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactg 102  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||| ||||| |||||||||        ||||||||||||| ||    
T  48970873 tatgtttgcataagaatattagatttgaaacttgaaaatgtatatgaaaatggataaaaatgaccaaattgaaatgaaaaa---ataaaggaccaaaatg 48970969  T
Q  103 ttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||  |||||||||||||| |||||||| | |||||||    
T  48970970 ttacctgaaattaagttaagggactaaaaatgtaatttt 48971008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 8828721 - 8828579
Alignment:
Q  2 ctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg---nnnnnnngataaaggaccaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||| ||| |||||          |||||||||  ||    
T  8828721 ctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggataaaaaggaccaaattcaaatgaaaaaaaaaagataaaggattaa 8828622  T
Q  99 actgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||||  |||||||||||||| |||||||||| |||||||    
T  8828621 actgttacctgaaattaagttaagggactaaaagtgtaatttt 8828579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 50208530 - 50208673
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||   |||||||||||||| || |||||||||||||||||| |||||||||| || |||||||||       |||||||||||||||    
T  50208530 tctatgtttgcataa---tattagatttgaagtttaaaaatgtatatgaaaatggacaaaaaggaacaaattgaaatgaaaaaaagataaaggaccaaac 50208626  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    |||||   |||||||||||||| || ||||| | |||||||||||||    
T  50208627 tgttatctgaaattaagttaagggattaaaaatgtaattttgccaaa 50208673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17504186 - 17504109
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| || |||||||||    
T  17504186 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggatcaaattgaaatg 17504109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 26874368 - 26874230
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactg 102  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| ||| |||||       |||||||||  ||||||    
T  26874368 tatgtttgcataagaatatttaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattaaaatgaaaaaaagataaaggattaaactg 26874269  T
Q  103 ttactagaaattaagttaagagactaaaagtataatttt 141  Q
    | ||  |||||||| ||||| ||||| |||| |||||||    
T  26874268 taacctgaaattaaattaagggactagaagtgtaatttt 26874230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 35521364 - 35521225
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | | |||||||||       ||||||||||         
T  35521364 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggtctaaattgaaatgaaaaaaagataaaggac----a 35521269  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  ||||||||||||||| ||||||||| ||| ||||||    
T  35521268 tgttacctgaaattaagttaagaaactaaaagtgtaactttgcc 35521225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 27547113 - 27547252
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||| | ||||||||||||||||| ||| |||||||| ||||||||||||| ||| |||||       ||||| ||||||| |    
T  27547113 tctatgtttgcataagaatataaaatttgaagcttgaaaatatatttgaaaatggacaaaaaggaccaaattaaaatgaaaaaaagataagggaccaagc 27547212  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattt 140  Q
    ||||||  |||||| ||||||| ||||||| || ||||||    
T  27547213 tgttacatgaaatttagttaagggactaaatgtgtaattt 27547252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 45286351 - 45286232
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||| ||||||  ||||||||||||||||    
T  45286351 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaattgttacctgaaattaagttaagag 45286252  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  45286251 actaaaagtgtaattttgcc 45286232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 5618266 - 5618388
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |    
T  5618266 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaggg 5618365  T
Q  125 actaaaagtataattttgccaaa 147  Q
    ||||||||| ||| |||||||||    
T  5618366 actaaaagtgtaactttgccaaa 5618388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 45569175 - 45569301
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||| ||||||||||||||||| ||||||| ||||||||| ||||||| |||||| ||||| ||||| |||||||||       |||||||||||||||    
T  45569175 tctatatttgcataagaatattatatttgaaacttgaaaatatatatgagaatgaagaaaaatgaccaaattgaaatgaaaaaaagataaaggaccaaac 45569274  T
Q  101 tgttactagaaattaagttaagagact 127  Q
    |||||   |||||||||||||| ||||    
T  45569275 tgttatctgaaattaagttaagggact 45569301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 26095588 - 26095488
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| ||||||| |       |||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  26095588 atatgaaaatggacaaaaaggaccaaattgaaaggaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtataattttgc 26095489  T
Q  144 c 144  Q
    |    
T  26095488 c 26095488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 147
Target Start/End: Complemental strand, 31289354 - 31289251
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||| ||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |||||||||| |||||||||    
T  31289354 atatgaaaatggacaaaaaagaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 31289255  T
Q  144 caaa 147  Q
    ||||    
T  31289254 caaa 31289251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 3459776 - 3459717
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaa 62  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3459776 tatgtttgtataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaa 3459717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 44 - 144
Target Start/End: Original strand, 8853309 - 8853409
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||        ||||||||||||||||||||  |||||||||||||| |||||||||| |||||||||    
T  8853309 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaaataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 8853408  T
Q  144 c 144  Q
    |    
T  8853409 c 8853409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 17504238 - 17504357
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||| ||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |    
T  17504238 attttaagcttaaaaattcatatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaggg 17504337  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||| | ||||||||||    
T  17504338 actaaaaatgtaattttgcc 17504357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 45315399 - 45315257
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||||||||| | ||||| ||||| ||| |||||        ||||||||||||||    
T  45315399 tctatgtttgcataagaatatttaatttga-gcttgaaaatgtatatgaaaatggataaaaatgaccaaattaaaatgaaaaaaaagataaaggaccaaa 45315301  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
     | ||||  |||||||||||||| || ||||||| ||||||||||    
T  45315300 ttattacctgaaattaagttaaggga-taaaagtgtaattttgcc 45315257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 43726348 - 43726212
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| ||||||||||||||||        ||||||| |||||| ||||||| || || |||||||||       |||||||||||||||    
T  43726348 tctatgtttgcataaaaatattagatttgaag--------tgtatataaaaatggacaaaaaagatcaaattgaaatgaaaaaaagataaaggaccaaac 43726257  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcca 145  Q
    |||||   ||||||||||||||  ||||||||| |||||||||||    
T  43726256 tgttatctgaaattaagttaaggaactaaaagtgtaattttgcca 43726212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 16515753 - 16515631
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||| ||| |||||||||       |||||||||||||||| ||||  |||||||| ||||| |    
T  16515753 attttaagcttaaaaattcatatgaaaatggacaaaaaggtccaaattgaaatgaaaaaaagataaaggaccaaactattacctgaaattaaattaaggg 16515654  T
Q  125 actaaaagtataattttgccaaa 147  Q
    ||||||| | |||||||||||||    
T  16515653 actaaaaatgtaattttgccaaa 16515631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 147
Target Start/End: Complemental strand, 7349876 - 7349767
Alignment:
Q  38 aaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataa 137  Q
    |||||||||| |||||| |||||||  |||| |||||||||       |||||||||||||| |||||   |||||||||||||| |||||||||| |||    
T  7349876 aaatgtatataaaaatggacaaaaaaaaccaaattgaaatgaaaaaaagataaaggaccaaagtgttatctgaaattaagttaagggactaaaagtgtaa 7349777  T
Q  138 ttttgccaaa 147  Q
    ||||||||||    
T  7349776 ttttgccaaa 7349767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 144
Target Start/End: Complemental strand, 25012760 - 25012647
Alignment:
Q  32 gcttgaaaatgtatatgaaaa-tgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaa 130  Q
    |||| ||||||||||| |||| |||||||||||||||| ||| |||||       |||||||||||||||||||||   ||||||||||||| |||||||    
T  25012760 gcttaaaaatgtatatcaaaaatgaacaaaaaggaccaaattaaaatgaaaaaaagataaaggaccaaactgttacctaaaattaagttaagggactaaa 25012661  T
Q  131 agtataattttgcc 144  Q
    ||  ||||||||||    
T  25012660 agattaattttgcc 25012647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 40934537 - 40934413
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn--gataaaggaccaaactgttactagaaattaagttaag 122  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||         |||||||||||||||||||||   ||||||||||||     
T  40934537 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaaagataaaggaccaaactgttacccaaaattaagttaat 40934438  T
Q  123 agactaaaagtataattttgccaaa 147  Q
     |||||||||| |||||||||||||    
T  40934437 ggactaaaagtgtaattttgccaaa 40934413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 39673050 - 39673148
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgtta-ctagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||||||  ||||||||||||| |||||||||       |||||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||    
T  39673050 atatgaaaatagacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttatcta-aaattaagttaagggactaaaagtgtaattttg 39673148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 12650136 - 12650234
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    |||| |||||| ||||||| ||||| |||||||||       |||||||||||||||||||||  |||||||||||||  |||||||||| ||||||||    
T  12650136 atataaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaaggactaaaagtgtaattttg 12650234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24234680 - 24234627
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatg 54  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||||||||    
T  24234680 tctatgtttgcataagaatataagatttgaagcttgaaaatccatatgaaaatg 24234627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 32694427 - 32694306
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||| ||||||| ||||||||||||| ||| |||||       ||||| |||||||| ||||||  | |||||||||||| |    
T  32694427 attttaagcttaaaaattcatacgaaaatggacaaaaaggaccaaattaaaatgaaaaaaagataa-ggaccaaattgttacctgtaattaagttaaggg 32694329  T
Q  125 actaaaagtataattttgccaaa 147  Q
    |||||||||||||||||||||||    
T  32694328 actaaaagtataattttgccaaa 32694306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 39363954 - 39363901
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatg 54  Q
    |||||||||||||||||||||||||||||| |||| ||||| ||||||||||||    
T  39363954 tctatgtttgcataagaatattagatttgaggcttaaaaatttatatgaaaatg 39363901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 50312176 - 50312237
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaa 62  Q
    |||||| |||||||||||||||||||  ||||||||||||||| |||||||||| |||||||    
T  50312176 tctatggttgcataagaatattagatccgaagcttgaaaatgtgtatgaaaatggacaaaaa 50312237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 731013 - 731110
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||| ||| | ||||  |||||||||||||| |||||||||| |||||||    
T  731013 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaatgataaaggactaaattattacctgaaattaagttaagggactaaaagtgtaatttt 731110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 1501733 - 1501830
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||||||| |||||||||| || ||| ||||        |||||||||||||||||||||  |||||||| ||||| ||||||||||||||||||    
T  1501733 atatgaaaatggacaaaaaggatcaaattaaaataaaaaaaagataaaggaccaaactgttacctgaaattaaattaagggactaaaagtataatttt 1501830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 40770240 - 40770143
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||||||| |||||||||| || |||||||||       |||||| |||| |||||||||  ||||||||||||||||||||||| | |||||||    
T  40770240 atatgaaaatggacaaaaaggatcaaattgaaatgaaaaaaagataaaagacccaactgttacctgaaattaagttaagagactaaaaatgtaatttt 40770143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 9877503 - 9877404
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| |||||||||| || ||||||| |       ||||||||||||| |||||||  ||||||||||||||||||||||| | |||||||||    
T  9877503 atatgaaaatggacaaaaaggatcaaattgaaacgaataaaagataaaggaccaa-ctgttacctgaaattaagttaagagactaaaaatgtaattttgc 9877405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 17191318 - 17191198
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn-gataaaggaccaaactgttactagaaattaagttaaga 123  Q
    |||| |||||| |||||  |||| |||||| ||||||||||||| |||||||||        |||||| ||||||| ||||||  ||||||||||||||     
T  17191318 attttaagcttaaaaattcatataaaaatggacaaaaaggaccaaattgaaatgaaaataaagataaatgaccaaattgttacctgaaattaagttaagg 17191219  T
Q  124 gactaaaagtataattttgcc 144  Q
    |||||||||| ||||||||||    
T  17191218 gactaaaagtgtaattttgcc 17191198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 27067190 - 27067245
Alignment:
Q  89 aaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||||||||||||||   ||||||||||||| |||||||||||||||||||||    
T  27067190 aaaggaccaaactgttacctaaaattaagttaagggactaaaagtataattttgcc 27067245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 35521425 - 35521521
Alignment:
Q  47 tgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||| ||||||| ||||| |||||||||       |||||||||||||||||||||   ||||||||||||| |||||||||| ||||||||||    
T  35521425 tgaaaatggacaaaaatgaccaaattgaaatgaaaaaa-gataaaggaccaaactgttacctaaaattaagttaagggactaaaagtgtaattttgcc 35521521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 29716410 - 29716468
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||||||||||||||||  |||||||||||||| |||||||| | ||||||||||    
T  29716410 gataaaggaccaaactgttacctgaaattaagttaagggactaaaaatgtaattttgcc 29716468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 44344219 - 44344338
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  |||| |||||  | ||||||||||| |||||||||       |||||||||| ||||||||||  |||||||||||||  |    
T  44344219 attttaagcttaaaaattaatataaaaatagataaaaaggaccaaattgaaatgaaaaaaagataaaggactaaactgttacctgaaattaagttaacgg 44344318  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  44344319 actaaaagtgtaattttgcc 44344338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 3459849 - 3459947
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn-gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||||||| ||||||| ||||| |||||||||        ||||||||||||| |||||||  |||||||||||||| |||||||| |||||||||    
T  3459849 atatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaaagataaaggaccaacctgttacctgaaattaagttaagggactaaaaatataatttt 3459947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 24234732 - 24234853
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||||||||||||||||  ||||| ||||  ||||||||||||| |||||||||        ||| ||||||||||| ||||   ||||||||||||| |    
T  24234732 atttgaagcttgaaaattcatatgtaaatagacaaaaaggaccaaattgaaatgaaaaaaa-atataggaccaaactattacctaaaattaagttaaggg 24234830  T
Q  125 actaaaagtataattttgccaaa 147  Q
    ||||||| | |||||||||||||    
T  24234831 actaaaattgtaattttgccaaa 24234853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 4695036 - 4694939
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||||||| ||||||| ||||| |||||||||       |||||| ||| |||||||||   |||||||| |||||||||||||||| |||||||    
T  4695036 atatgaaaatggacaaaaaagaccaaattgaaatgaaaataagataaaagactaaactgttatctgaaattaaattaagagactaaaagtgtaatttt 4694939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 27065344 - 27065392
Alignment:
Q  30 aagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    |||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  27065344 aagcttaaaaatgtatatgaaaatgaacaaaaatgaccaaattgaaatg 27065392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 8828774 - 8828894
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaag-gaccaaactgttactagaaattaagttaaga 123  Q
    |||| |||||| |||||  |||| |||||| |||||| |||||| |||||||||       ||||||  ||| ||||||||||  |||||||||||||||    
T  8828774 attttaagcttaaaaattcatataaaaatggacaaaagggaccaaattgaaatgaaaaaaagataaaatgactaaactgttacctgaaattaagttaaga 8828873  T
Q  124 gactaaaagtataattttgcc 144  Q
    |||| ||||| ||||||||||    
T  8828874 gactgaaagtgtaattttgcc 8828894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 17504092 - 17504037
Alignment:
Q  87 ataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    |||||||| |||||||||||  |||||||||||||| |||||||||| ||||||||    
T  17504092 ataaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaattttg 17504037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 33471470 - 33471419
Alignment:
Q  90 aaggaccaaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    |||||||||||||||||  |||||||||||||| |||||||||| |||||||    
T  33471470 aaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaatttt 33471419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 49021767 - 49021683
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagacta 128  Q
    ||||||||||| ||||||| ||||| |||||||||       |||||| ||||||||||||||  |||||||||||||| |||||    
T  49021767 atatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaatgaccaaactgttacctgaaattaagttaagggacta 49021683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 45569072 - 45569015
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||| ||||||||||||||  ||||||||||||| ||||||||||| ||||||||||    
T  45569072 gataaaagaccaaactgttacctgaaattaagttaa-agactaaaagtgtaattttgcc 45569015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 46283459 - 46283401
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||| ||||||||||||   ||||||||||||||||| ||||||| ||||||||||    
T  46283459 gataaagcaccaaactgttatctgaaattaagttaagagattaaaagtgtaattttgcc 46283401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 50312124 - 50312006
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| ||| ||||         ||||| ||||||||||||||  |||||||| |||||||    
T  50312124 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattaaaataaaaaaaa-ataaatgaccaaactgttacctgaaattaaattaagag 50312026  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||| | ||||||||||    
T  50312025 actaaaaatgtaattttgcc 50312006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 144
Target Start/End: Original strand, 30146279 - 30146373
Alignment:
Q  50 aaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||| ||||||||||||| ||| |||||       |||| |||| |||||||||||  ||||||||| |||| |||||||||| ||||||||||    
T  30146279 aaatggacaaaaaggaccaaattaaaatgaaaaaaagatataggatcaaactgttacctgaaattaagctaagggactaaaagtgtaattttgcc 30146373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 34480440 - 34480501
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    |||||||||| ||| |||||||  |||| |||||||| |||||||||| |||||||||||||    
T  34480440 gataaaggactaaattgttacttaaaataaagttaagggactaaaagtgtaattttgccaaa 34480501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 31087672 - 31087597
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    ||||||| ||||  ||||||||||||||| |||||||||  | ||| |||||||| |||||||| | |||||||||    
T  31087672 tatgtttacatataaatattagatttgaaacttgaaaatccaaatgtaaatgaaccaaaaggacgaaattgaaatg 31087597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 19897234 - 19897173
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    |||||||||| ||| ||||||   ||||||||||||| ||||||  ||||||||||||||||    
T  19897234 gataaaggacgaaaatgttacctaaaattaagttaagggactaattgtataattttgccaaa 19897173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 29570709 - 29570770
Alignment:
Q  2 ctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaag 63  Q
    ||||||||||||| |||| || ||||||||||||||||||  ||||| ||||| || |||||    
T  29570709 ctatgtttgcatatgaatctttgatttgaagcttgaaaatacatatgcaaatggaccaaaag 29570770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 30027108 - 30027071
Alignment:
Q  4 atgtttgcataagaatattagatttgaagcttgaaaat 41  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  30027108 atgtttgcatatgaattttagatttgaagcttgaaaat 30027071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 35206905 - 35206853
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaat 53  Q
    ||||| ||| ||| ||||||||||||||||| |||||||||  ||||||||||    
T  35206905 tctatatttacatgagaatattagatttgaaccttgaaaatacatatgaaaat 35206853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 3012056 - 3011911
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngat-aaaggaccaaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| | |||||||||       ||| |||||||||||    
T  3012056 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggacaaaattgaaatgaaaaaaagataaaaggaccaaa 3011957  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcca 145  Q
    |||||||  |||||||||||||||||||||||||||||||||||||    
T  3011956 ctgttacctgaaattaagttaagagactaaaagtataattttgcca 3011911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 22568934 - 22569074
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||    
T  22568934 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 22569033  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||   ||||||||||||| |||||||||| |||||||    
T  22569034 tgttacctaaaattaagttaagggactaaaagtgtaatttt 22569074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 2316660 - 2316803
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| || |||||||||       |||||||||||||||    
T  2316660 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaaaggacaaaaaggatcaaattgaaatgaaaaaaagataaaggaccaaac 2316759  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||    
T  2316760 tgttacctgaaattaagttaagggactaaaagtgtaattttgcc 2316803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 9899366 - 9899509
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||| |||||||||       |||||||||||||||    
T  9899366 tctatgtttgcataagaatattagatttgaagtttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 9899465  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||    
T  9899466 tgttacctgaaattaagttaagggactaaaagtgtaattttgcc 9899509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 3105747 - 3105607
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||    
T  3105747 tctatgtttgcataagaatgttagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 3105648  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
     |||||  ||||||||||||||||||||||| | |||||||    
T  3105647 agttacctgaaattaagttaagagactaaaaatgtaatttt 3105607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 8129704 - 8129847
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||| ||||||||    
T  8129704 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaatgaccaaac 8129803  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| || |||| || ||||||||||    
T  8129804 tgttacctgaaattaagttaagggattaaatgtgtaattttgcc 8129847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 13853285 - 13853142
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       |||||| |||||||     
T  13853285 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaatgaccaaat 13853186  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||| ||||||||||||    
T  13853185 tgttacctgaaattaagttaagggactaaaaatataattttgcc 13853142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 12240652 - 12240798
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||| || || |||||||||       |||||||||||||||    
T  12240652 tctatgtttacataagaatattagatttgaagcatgaaaatgtatatgaaaatggacaaaaatgatcaaattgaaatgaaaaaaagataaaggaccaaac 12240751  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||  ||||||||||||||||||||||||| ||||| |||||||    
T  12240752 tgttacctgaaattaagttaagagactaaaagtgtaattctgccaaa 12240798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 2883024 - 2882880
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactg 102  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| | |||||||||       |||||||||||||||||    
T  2883024 tatgtttggataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaatgactaaattgaaatgaaaaaaagataaaggaccaaactg 2882925  T
Q  103 ttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||  |||||||||||||| |||||||| | |||||||||||||    
T  2882924 ttacctgaaattaagttaagggactaaaattgtaattttgccaaa 2882880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 20027944 - 20028084
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||| |       |||||| ||||||||    
T  20027944 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatattaaaatggacaaaaaggaccaaattgaaacgaaaaaaagataaaagaccaaac 20028043  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  ||||||||||||||||||||||||  |||||||    
T  20028044 tgttacctgaaattaagttaagagactaaaagcgtaatttt 20028084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 9220274 - 9220420
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||  ||||||||||||| |||||||||       |||||| ||||||||    
T  9220274 tctatgtttgcataagagtattagatttgaagcttgaaaatgtatataaaaatagacaaaaaggaccaaattgaaatgaaaaaaagataaaagaccaaac 9220373  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    | ||||  ||||||||||||||||| ||||||| |||||||||||||    
T  9220374 tcttacctgaaattaagttaagagattaaaagtgtaattttgccaaa 9220420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 24325135 - 24324993
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       |||||||| |||||     
T  24325135 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaagggccaaat 24325036  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||  |||||||||||||  |||||||||| |||||||||    
T  24325035 tgttacctgaaattaagttaaaggactaaaagtgtaattttgc 24324993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 685096 - 684956
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||| |||||||||       ||||||||||||||     
T  685096 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaagaaccaaattgaaatgaaaaaaagataaaggaccaaat 684997  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    |||||   |||||||||||||| |||||||||| |||||||    
T  684996 tgttatctgaaattaagttaagggactaaaagtgtaatttt 684956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 9546554 - 9546410
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||        |||||| |||||||    
T  9546554 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagataaaagaccaaa 9546455  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||  |||||||||||||| |||||||| | ||||||||||    
T  9546454 ctgttacctgaaattaagttaagggactaaaattgtaattttgcc 9546410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 13178366 - 13178225
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||       |||||| |||||||     
T  13178366 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaagaccaaattgaaatg-aaaaaagataaaagaccaaat 13178268  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||| | ||||||||||||| ||||||||||| ||||||||||    
T  13178267 tgtta-ttgaaattaagttaaaagactaaaagtgtaattttgcc 13178225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 21926205 - 21926064
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactg 102  Q
    ||||||||||||||||||||||||||||||||| |||||  ||||||||||| | ||||||||||| |||||||||        ||||||||||||||||    
T  21926205 tatgtttgcataagaatattagatttgaagcttaaaaattcatatgaaaatggagaaaaaggaccaaattgaaatgaaaaaaatataaaggaccaaactg 21926106  T
Q  103 ttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||  |||||||||||||| |||||||||| ||||||||||    
T  21926105 ttacctgaaattaagttaagggactaaaagtgtaattttgcc 21926064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 17853786 - 17853656
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       |||||| ||||||||    
T  17853786 tctatgtttgcatatgaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaagaccaaac 17853687  T
Q  101 tgttactagaaattaagttaagagactaaaa 131  Q
    ||||||  |||||||| ||||| ||||||||    
T  17853686 tgttacctgaaattaatttaagggactaaaa 17853656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 11361957 - 11362097
Alignment:
Q  7 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttac 106  Q
    |||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||| |||||||||       |||||||||||||| |||||     
T  11361957 tttgcataagaatattagatttgaagcttgaaaatgtacataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaattgttat 11362056  T
Q  107 tagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
      |||||||||||||| ||| |||||| ||||||| |||||    
T  11362057 ctgaaattaagttaagggacgaaaagtgtaatttttccaaa 11362097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 8488005 - 8487863
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaat--gnnnnnnngataaaggaccaa 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||           ||||||||||||    
T  8488005 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaagttgaaataaaaaaaaaaaataaaggaccaa 8487906  T
Q  99 actgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||||  |||||||||||||| |||||||| | |||||||    
T  8487905 actgttacatgaaattaagttaagggactaaaaatgtaatttt 8487863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 2863721 - 2863577
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaact 101  Q
    |||||||| |||| ||||||||||||||||||||||||||||| | |||||| ||||||||||| | |||||||||        ||||||||||||||||    
T  2863721 tatgtttggataataatattagatttgaagcttgaaaatgtat-taaaaatggacaaaaaggactaaattgaaatgaaaaaacagataaaggaccaaact 2863623  T
Q  102 gttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    |||||  |||||||||||||| |||||||| | |||||||||||||    
T  2863622 gttacctgaaattaagttaagggactaaaattgtaattttgccaaa 2863577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 28852307 - 28852186
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||   ||||||||||||| |    
T  28852307 attttaagcttaaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctaaaattaagttaaggg 28852208  T
Q  125 actaaaagtataattttgccaa 146  Q
    ||||||||| ||||||||||||    
T  28852207 actaaaagtgtaattttgccaa 28852186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14655247 - 14655324
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  14655247 tctatgtttgcataagaatatttaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatg 14655324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 24896313 - 24896238
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||    
T  24896313 tatgtttgcataagaatattaaatttgaagcttgaaaatgtatatgaaaatgaacaaaaatgaccaaattaaaatg 24896238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 28852359 - 28852489
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||||||||||||  ||||||||| ||| |||||||||       |||||| || |||||    
T  28852359 tctatgtttgcataaaaatattagatttaaagtttgaaaatgtatatgaaaatagacaaaaaggtccaaattgaaatgaaaaaaagataaaagatcaaac 28852458  T
Q  101 tgttactagaaattaagttaagagactaaaa 131  Q
    ||||||   ||||||| ||||||||||||||    
T  28852459 tgttacctaaaattaatttaagagactaaaa 28852489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 25121640 - 25121568
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattg 73  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||| ||||    
T  25121640 tctatgtttgcataagaatattagatttgaaacttgaaaatgtatataaaaatggacaaaaaggaccaaattg 25121568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 685148 - 685264
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||| ||||||||||  ||||||||||||||||    
T  685148 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggactaaactgttacctgaaattaagttaagag 685247  T
Q  125 actaaaagtataatttt 141  Q
    ||||||||| |||||||    
T  685248 actaaaagtgtaatttt 685264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 9899295 - 9899195
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |||||||||| |||||||||    
T  9899295 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 9899196  T
Q  144 c 144  Q
    |    
T  9899195 c 9899195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 9546606 - 9546725
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       ||||||||| |||||||||||  |||||||||||||| |    
T  9546606 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggatcaaactgttacctgaaattaagttaaggg 9546705  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  9546706 actaaaagtgtaattttgcc 9546725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 17853838 - 17853957
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       ||||||||||||||||||||   |||||||||||||| |    
T  17853838 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttatctgaaattaagttaaggg 17853937  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  17853938 actaaaagtgtaattttgcc 17853957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 44 - 144
Target Start/End: Original strand, 25121711 - 25121811
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||  |||||||||| |||||||||    
T  25121711 atatgaaaatggacaaaaaggaccaaattgaaatgcaaaaaagataaaggaccaaactgttacctgaaattaagttaaaggactaaaagtgtaattttgc 25121810  T
Q  144 c 144  Q
    |    
T  25121811 c 25121811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 13178418 - 13178537
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||||||||||||||| |||||||| |||| |||||||||       |||||||||||||| ||||||   ||||||||||||| |    
T  13178418 attttaagcttaaaaatgtatatgaaaatggacaaaaagaaccaaattgaaatgaaaaaaagataaaggaccaaaatgttacctaaaattaagttaaggg 13178517  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||| | ||||||||||    
T  13178518 actaaaactgtaattttgcc 13178537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 22568882 - 22568763
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |    
T  22568882 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaggg 22568783  T
Q  125 actaaaagtataattttgcc 144  Q
    |||||||   ||||||||||    
T  22568782 actaaaaaagtaattttgcc 22568763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 9220203 - 9220105
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||||||| ||||||||||||| |||||||||       ||||||||| |||||||||||  |||||||||||||| |||||||||| ||||||||    
T  9220203 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggatcaaactgttacctgaaattaagttaagggactaaaagtgtaattttg 9220105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 144
Target Start/End: Complemental strand, 27820776 - 27820659
Alignment:
Q  27 ttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagac 126  Q
    ||||||||||||||||||||| |||||| | ||||| ||||| |||||||||       ||||||||| |||||||||||  |||||||| ||||| |||    
T  27820776 ttgaagcttgaaaatgtatataaaaatggataaaaatgaccaaattgaaatgaaaaaaagataaaggatcaaactgttacctgaaattaacttaagggac 27820677  T
Q  127 taaaagtataattttgcc 144  Q
    || |||| ||||||||||    
T  27820676 tagaagtgtaattttgcc 27820659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 1925216 - 1925116
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||| ||||| ||||  |||||||||||||| |||||||||| |||||||||    
T  1925216 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggactaaacttttacctgaaattaagttaagggactaaaagtgtaattttgc 1925117  T
Q  144 c 144  Q
    |    
T  1925116 c 1925116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 21926278 - 21926380
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| ||| |||||       |||||||||||||||||||||  ||||||||||||| ||||||||| | |||||||||    
T  21926278 atatgaaaatggacaaaaaggaccaaattaaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaa-agactaaaaatgtaattttgc 21926376  T
Q  144 caaa 147  Q
    ||||    
T  21926377 caaa 21926380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 2316608 - 2316487
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||| ||||| ||||  |||||||| ||||| |    
T  2316608 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggactaaactattacctgaaattaaattaaggg 2316509  T
Q  125 actaaaagtataattttgccaa 146  Q
    ||||||| |||||||| |||||    
T  2316508 actaaaaatataatttggccaa 2316487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 133
Target Start/End: Original strand, 3105818 - 3105907
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagt 133  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||| ||||| ||||||||||    
T  3105818 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaaattaagggactaaaagt 3105907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 24325192 - 24325309
Alignment:
Q  30 aagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn-gataaaggaccaaactgttactagaaattaagttaagagacta 128  Q
    |||||| |||||  ||||||||||| ||||||||||||| ||| |||||        |||||||||||||||||||||  |||||||||||||| || ||    
T  24325192 aagcttaaaaattcatatgaaaatggacaaaaaggaccatattaaaatgaaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggatta 24325291  T
Q  129 aaagtataattttgccaa 146  Q
    ||||| ||||||||||||    
T  24325292 aaagtgtaattttgccaa 24325309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 144
Target Start/End: Original strand, 1136959 - 1137059
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       ||||||||||||||||||||   ||||||||| |||| |||||||| | |||||||||    
T  1136959 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttaactgaaattaagctaagggactaaaattgtaattttgc 1137058  T
Q  144 c 144  Q
    |    
T  1137059 c 1137059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 20027892 - 20027776
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||| || |||||||||||  |||||||||||||  |    
T  20027892 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaagatcaaactgttacctgaaattaagttaatgg 20027793  T
Q  125 actaaaagtataatttt 141  Q
    ||||||| |||||||||    
T  20027792 actaaaaatataatttt 20027776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1925287 - 1925348
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaa 62  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||| |||||| |||||||    
T  1925287 tctatttttgcataagaatgttagatttgaagtttgaaaatgtatataaaaatggacaaaaa 1925348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 144
Target Start/End: Original strand, 1925408 - 1925465
Alignment:
Q  87 ataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||||||||||||||||  |||||||||||||| |||||||||| ||||||||||    
T  1925408 ataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 1925465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 11361908 - 11361789
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||  |||||||||| || ||| |||||       |||||| ||| ||||||||||  |||||||| |||||||    
T  11361908 attttaagcttaaaaattcatatgaaaattgacaaaaaggaacaaattaaaatgaaaaaaagataaatgactaaactgttacctgaaattaaattaagag 11361809  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  11361808 actaaaagtgtaattttgcc 11361789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 7279610 - 7279553
Alignment:
Q  87 ataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||| || |||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  7279610 ataaatgatcaaactgttacttgaaattaagttaagaaactaaaagtgtaattttgcc 7279553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 12240599 - 12240481
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| |||||||||| |  ||||||||        ||||||||| |||||||||||   |||||||||||| ||    
T  12240599 attttaagcttaaaaattcatatgaaaatggacaaaaaggatcgaattgaaataaaaaaaagataaaggatcaaactgttacctaaaattaagttaaaag 12240500  T
Q  125 actaaaagtataattttgc 143  Q
    ||||||||| |||||||||    
T  12240499 actaaaagtgtaattttgc 12240481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 24335590 - 24335533
Alignment:
Q  87 ataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||||||||| ||||||  |||||||| |||||||||||||||| ||||||||||    
T  24335590 ataaaggaccaaattgttacctgaaattaaattaagagactaaaagtgtaattttgcc 24335533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 13853337 - 13853452
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||  ||||||| ||||| |||||||||       |||||| ||||||||||||||  ||||||||||| || |    
T  13853337 attttaagcttaaaaattcatatgaaaatagacaaaaaagaccaaattgaaatgaaaaaaagataaaagaccaaactgttacctgaaattaagtt-aggg 13853435  T
Q  125 actaaaagtataatttt 141  Q
    ||||||||| |||||||    
T  13853436 actaaaagtgtaatttt 13853452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 25121581 - 25121526
Alignment:
Q  89 aaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||||||| ||||||  |||||||||||||||||||||| || ||||||||||    
T  25121581 aaaggaccaaattgttacctgaaattaagttaagagactaaacgtgtaattttgcc 25121526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 14655134 - 14655078
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    |||||||||||||||||||||   |||| |||||||| |||||||||| ||||||||    
T  14655134 gataaaggaccaaactgttacctaaaataaagttaagggactaaaagtgtaattttg 14655078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25026118 - 25026078
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaat 41  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  25026118 tctatgtttgcatataaatattagatttgaagcttgaaaat 25026078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 2863775 - 2863893
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaag-ttaaga 123  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||        ||| |||||||||| |||||  ||||||||| |||||     
T  2863775 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaat-atataggaccaaacggttacctgaaattaagtttaagt 2863873  T
Q  124 gactaaaagtataattttgc 143  Q
    |||||||||| ||| |||||    
T  2863874 gactaaaagtgtaactttgc 2863893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 2883078 - 2883184
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| | ||||||||||| ||| |||||       |||||||||||||||| ||||  |||||||| ||||| |    
T  2883078 attttaagcttaaaaattcatatgaaaatggataaaaaggaccaaattaaaatgaaaaaaagataaaggaccaaactattacctgaaattaaattaagtg 2883177  T
Q  125 actaaaa 131  Q
    | |||||    
T  2883178 attaaaa 2883184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 8129633 - 8129535
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagac-taaaagtataatttt 141  Q
    ||||||| ||| ||||||||||||| ||| ||||        ||||||||||||||||||||   ||||||||||||| |||| ||||||| |||||||    
T  8129633 atatgaacatggacaaaaaggaccaaattaaaataaaaagaagataaaggaccaaactgttatctgaaattaagttaaaagacttaaaagtgtaatttt 8129535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 8561 - 8705
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactg 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||| |||||||||       |||||||||||||||||    
T  8561 tatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggataaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactg 8660  T
Q  103 ttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||  ||||||||||||| ||||||||||| |||||||||||||    
T  8661 ttacctgaaattaagttaaaagactaaaagtgtaattttgccaaa 8705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 9e-45; HSPs: 77)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 7601764 - 7601908
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||        |||||| ||||||||    
T  7601764 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaattaaaaaaagataaatgaccaaac 7601863  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcca 145  Q
    ||||||  |||||||||||||| |||||||||| |||||||||||    
T  7601864 tgttacctgaaattaagttaagggactaaaagtgtaattttgcca 7601908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 19131043 - 19131187
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactg 102  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||       |||||||||||||||||    
T  19131043 tatgtttggataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggactaaattgaaatgaaaaaaagataaaggaccaaactg 19131142  T
Q  103 ttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||  |||||||||||||| |||||||||| |||||||||||||    
T  19131143 ttacctgaaattaagttaagggactaaaagtgtaattttgccaaa 19131187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 3279359 - 3279502
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       |||||| ||||||||    
T  3279359 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaatgaccaaac 3279458  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||  ||||||||||||| |||||||||| ||||||||||    
T  3279459 tgttacttaaaattaagttaagggactaaaagtgtaattttgcc 3279502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 40952211 - 40952067
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||        ||||||||||||||    
T  40952211 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagataaaggaccaaa 40952112  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||  |||||||||||||| |||||||||| ||||||||||    
T  40952111 ctgttacctgaaattaagttaagggactaaaagtgtaattttgcc 40952067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 39589747 - 39589894
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||        ||||||||||||||    
T  39589747 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggatcaaattgaaatgaaaaaaaagataaaggaccaaa 39589846  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    |||||||  |||||||| ||||  ||||||||||||||||||||||||    
T  39589847 ctgttacctgaaattaaattaaaggactaaaagtataattttgccaaa 39589894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 2426372 - 2426227
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||||||       |||||||||| ||||    
T  2426372 tctatgtttgcataagaatattagatttgaaacttaaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggactaaac 2426273  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||||    
T  2426272 tgttacctgaaattaagttaagggactaaaagtgtaattttgccaa 2426227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 14729617 - 14729762
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||| ||||| |||||||||       |||||||||||||||    
T  14729617 tctatgtttgcataagaatatttaatttgaagcttgaaaatgtatatgaaaatggacaaaaaagaccaaattgaaatgaaaaaaagataaaggaccaaac 14729716  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    |||||||  ||||||||||||| |||||||| | ||||||||||||    
T  14729717 tgttacttaaaattaagttaagggactaaaaatttaattttgccaa 14729762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 14871877 - 14871732
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| || | |||||| |||| |||||||||       |||||||||||||||    
T  14871877 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaactggataaaaagaaccaaattgaaatgaaaaaaagataaaggaccaaac 14871778  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||||    
T  14871777 tgttacctgaaattaagttaagggactaaaagtgtaattttgccaa 14871732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 16736946 - 16736801
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccaga--ttgaaatgnnnnnnngataaaggaccaa 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||| |  ||||||||       |||||||||||||    
T  16736946 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatagacaaaaaggaccaaattttgaaatgaaaaaaagataaaggaccaa 16736847  T
Q  99 actgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||||  |||||||||||||| |||||||||| ||||||||||    
T  16736846 actgttacctgaaattaagttaagggactaaaagtgtaattttgcc 16736801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 7610434 - 7610574
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||| |||||||||        ||||||||||||||    
T  7610434 tctatgtttgcataagaatataagatttgaagcttgaaaatgtatttgaaaatggacaaaaaagaccaaattgaaatgaaaaaaa-ataaaggaccaaac 7610532  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||  ||||||||||||||||||||||||| ||||||||    
T  7610533 tgttacctgaaattaagttaagagactaaaagtgtaattttg 7610574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 1643710 - 1643850
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||       ||| || ||||||||    
T  1643710 tctatgtttgcataagattattaaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagatgaaagaccaaac 1643809  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    |||||||  ||||||||||||| |||||||||| |||||||    
T  1643810 tgttacttaaaattaagttaagggactaaaagtgtaatttt 1643850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 12854746 - 12854890
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| |||||||||        ||||||||||||||    
T  12854746 tctatgtttgcataagaatattagatttaaagcttgaaaatgtatatgaaaatggataaaaaggaccaaattgaaatgaaaaaaaagataaaggaccaaa 12854845  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||  ||||||||||||||  ||||||||| ||||||||||    
T  12854846 ctgttacctgaaattaagttaaggaactaaaagtctaattttgcc 12854890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 33429676 - 33429536
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       ||||||||||||||     
T  33429676 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaat 33429577  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  |||||||||||||  || ||||||| |||||||    
T  33429576 tgttacctgaaattaagttaaaggattaaaagtgtaatttt 33429536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 1099063 - 1099206
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       ||||||||||||||     
T  1099063 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaat 1099162  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  ||||||||||||||  | ||||| | ||||||||||    
T  1099163 tgttacctgaaattaagttaaggtaataaaaatgtaattttgcc 1099206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 33381572 - 33381429
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       |||||| ||||||||    
T  33381572 tctatttttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaagaccaaac 33381473  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||| | ||| ||||||    
T  33381472 tgttacctgaaattaagttaagggactaaaaatgtaactttgcc 33381429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 42610924 - 42610777
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||         ||||| |||||||    
T  42610924 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggatcaaattgaaatgaaaaaaaaaataaatgaccaaa 42610825  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    |||||||  |||||||| ||||  ||||||||||||||||||||||||    
T  42610824 ctgttacctgaaattaaattaaaggactaaaagtataattttgccaaa 42610777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 24858546 - 24858400
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||||| ||||| |||||||||       |||||||||||||||    
T  24858546 tctatgtttgcataagaatataagatttgaagcttgaaaatatatttgaaaatggacaaaaaagaccaaattgaaatgaaaaaaagataaaggaccaaac 24858447  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||   ||||||||||||| |||||||| | |||||||||||||    
T  24858446 tgttacctaaaattaagttaagggactaaaaatgtaattttgccaaa 24858400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 37092350 - 37092491
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| |||||||||        ||||||||||||||    
T  37092350 tctatgtttgcataagaatatttaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagataaaggaccaaa 37092449  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    |||||||  |||||||| ||||||| |||||||| |||||||    
T  37092450 ctgttacctgaaattaacttaagagtctaaaagtgtaatttt 37092491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 22621218 - 22621362
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||       ||||||| || ||||    
T  22621218 tctatgtttgcataataatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggatcaaattgaaatgaaaaaaagataaagaactaaac 22621317  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcca 145  Q
    | ||||   ||||||||||||| |||||||||| |||||||||||    
T  22621318 tattacctaaaattaagttaagggactaaaagtgtaattttgcca 22621362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 32772162 - 32772306
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||         |||||||||||||    
T  32772162 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaaaaataaaggaccaaa 32772261  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||  |||||||||||||  ||| |||||| ||||||||||    
T  32772262 ctgttacctgaaattaagttaaaggacaaaaagtgtaattttgcc 32772306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13577434 - 13577560
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||        |||||||| |||||    
T  13577434 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaataaaaataaaggatcaaac 13577533  T
Q  101 tgttactagaaattaagttaagagact 127  Q
    ||||||  |||||||||||||| ||||    
T  13577534 tgttacctgaaattaagttaagggact 13577560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 2467230 - 2467371
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||       |||| |||| || |     
T  2467230 tctatgtttgcataagaatattagatttgaagcttgaaaatgtgtatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagatagaggatcatat 2467329  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||  ||||||||||||||  ||||||| | ||||||||    
T  2467330 tgttacctgaaattaagttaaggaactaaaaatgtaattttg 2467371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 3168236 - 3168091
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||  ||||| ||||||| ||| | |||||||||       |||||| ||||||||    
T  3168236 tctatgtttgcataagaatattatatttgaagcttgaaaatatatatataaatggacaaaaatgactaaattgaaatg-aaaaaagataaatgaccaaac 3168138  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||| ||||||||||||||  ||||||||| |||||||||||||    
T  3168137 tgttacttgaaattaagttaaggaactaaaagtgtaattttgccaaa 3168091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 18707413 - 18707336
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||    
T  18707413 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatg 18707336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 37943668 - 37943538
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| |||||||||||| || ||||||||||||||| |||||| ||||||||||||| |||||||||       |||||||||| ||||    
T  37943668 tctatgtttgcataaaaatattagatttaaaacttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatg-aaaaaagataaaggactaaac 37943570  T
Q  101 tgttactagaaattaagttaagagactaaaag 132  Q
    | ||||  ||||||||||||||||||||||||    
T  37943569 tattacctgaaattaagttaagagactaaaag 37943538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 8357208 - 8357068
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||||  |||||||||        |||||| |||||||    
T  8357208 tctatgtttgcataagaatatttaatttgaagtttgaaaatgtatatgaaaatggacaaaaaggacccaattgaaatgaaaaaaa-ataaagaaccaaac 8357110  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    | ||||  |||||||||||||| |||||||| ||||||||||    
T  8357109 tattacctgaaattaagttaagggactaaaaatataattttg 8357068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 19984403 - 19984274
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||       ||||||||||||||     
T  19984403 tctatgttttcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaatgaccaaattaaaatgaaaaaaagataaaggaccaaat 19984304  T
Q  101 tgttactagaaattaagttaagagactaaa 130  Q
    | || |  |||||||| |||||||||||||    
T  19984303 tattgcctgaaattaaattaagagactaaa 19984274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 31618338 - 31618477
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||| ||| |||||       |||||| ||||||||    
T  31618338 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaattgacaaaagggaccaaattaaaatg-aaaaaagataaaagaccaaac 31618436  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    |||||   ||| |||||||||| || ||||| | |||||||    
T  31618437 tgttatctgaatttaagttaagggattaaaaatgtaatttt 31618477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 33429747 - 33429850
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |||||||||| |||||||||    
T  33429747 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 33429846  T
Q  144 caaa 147  Q
    ||||    
T  33429847 caaa 33429850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 30129616 - 30129472
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||| || ||| ||||        |||||| |||||||     
T  30129616 tctatgtttgcataa-aatattagattcgaagcttgaaaatgtatatgaaaatggacaaaaaggatcaaattaaaat-aaaaaaagataaaagaccaaat 30129519  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||  |||||||||||||  |||||||||| ||||||| |||||    
T  30129518 tgttacctgaaattaagttaaaggactaaaagtgtaattttcccaaa 30129472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 146
Target Start/End: Complemental strand, 39589715 - 39589613
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |||||||||| |||||||||    
T  39589715 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 39589616  T
Q  144 caa 146  Q
    |||    
T  39589615 caa 39589613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 13455819 - 13455698
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||| |||||| |||||| |||||| |||||||||       ||||||| | ||||     
T  13455819 tctatgtttgcattagaatattagatttgaagcttaaaaatgtatataaaaatggacaaaatggaccaaattgaaatgaaaaaaagataaagaatcaaat 13455720  T
Q  101 tgttactagaaattaagttaag 122  Q
    |||||||  |||||||||||||    
T  13455719 tgttacttaaaattaagttaag 13455698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 5239421 - 5239281
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||  |||| | |||||||       ||||||||||||||     
T  5239421 tctatgtttgcataagaatatttaatttgaagcttgaaaatgtatatgaaaatggacaaaaaaaaccaaaatgaaatgaaaaaaagataaaggaccaaat 5239322  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    |||||   | |||||||||||  |||||||| | |||||||    
T  5239321 tgttatctgtaattaagttaaaggactaaaaatgtaatttt 5239281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 12875838 - 12875982
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    |||||||||||||||||||||||||||| ||||||||||||  |||| |||||| || ||||| || | |||||||||        |||||| |||||||    
T  12875838 tctatgtttgcataagaatattagatttaaagcttgaaaatccatataaaaatggaccaaaagaacaaaattgaaatgaaaaaaaagataaatgaccaaa 12875937  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||   |||||||||||| ||||||||| ||||||||||||    
T  12875938 ctgttacctaaaattaagttaaaagactaaaaatataattttgcc 12875982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 1643658 - 1643539
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| || ||||||       |||||||||||||||||||||  |||||||||||||| |    
T  1643658 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaatcgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaggg 1643559  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  1643558 actaaaagtgtaattttgcc 1643539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 147
Target Start/End: Complemental strand, 7601693 - 7601590
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| |||||| |||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |||||||| |||||||||||    
T  7601693 atatgaaaatggacaaaagggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaaatataattttgc 7601594  T
Q  144 caaa 147  Q
    ||||    
T  7601593 caaa 7601590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 31486076 - 31485957
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  |||||||| || ||||||| ||||| |||||||||       |||||||||||||||||||||  ||||||||||||||||    
T  31486076 attttaagcttaaaaattcatatgaaattggacaaaaaagaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagag 31485977  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  31485976 actaaaagtgtaattttgcc 31485957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 2492834 - 2492911
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| ||| |||||    
T  2492834 tctatgtttacataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaagaccaaattaaaatg 2492911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 144
Target Start/End: Complemental strand, 19130984 - 19130870
Alignment:
Q  30 aagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaa 129  Q
    |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| ||||||    
T  19130984 aagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaa 19130885  T
Q  130 aagtataattttgcc 144  Q
    |||| ||| ||||||    
T  19130884 aagtgtaactttgcc 19130870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 40952263 - 40952381
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       ||||||||||||||||||| || ||||||||||| || |    
T  40952263 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttgcttgaaattaagtttaggg 40952362  T
Q  125 actaaaagtataattttgc 143  Q
    ||||||||| |||||||||    
T  40952363 actaaaagtgtaattttgc 40952381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2961065 - 2961132
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggacca 68  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||||||||||    
T  2961065 tctatgtttgcataagaatattagatttgaagcttaaaaatttatataaaaatggacaaaaaggacca 2961132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2969533 - 2969600
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggacca 68  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||||||||||    
T  2969533 tctatgtttgcataagaatattagatttgaagcttaaaaatttatataaaaatggacaaaaaggacca 2969600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 32772091 - 32771991
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||  |||||||||| |||||||||    
T  32772091 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaaggactaaaagtgtaattttgc 32771992  T
Q  144 c 144  Q
    |    
T  32771991 c 32771991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 13697489 - 13697627
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |  |||| ||||| ||| ||||        |||||| |||||| |    
T  13697489 tctatgtttgcataagaatattagatttgaagcttgaaaatttatataaaaatggatgaaaatgaccaaattaaaattaaaaaaagataaatgaccaatc 13697588  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatt 139  Q
    |||||   |||||||||||||| || ||||||| |||||    
T  13697589 tgttatctgaaattaagttaagggattaaaagtgtaatt 13697627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 3974320 - 3974212
Alignment:
Q  37 aaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtata 136  Q
    |||||| ||||||||||| ||||||||||||| |||||||||       |||||||||||||| |||||   ||||||||||||||| ||||||| | ||    
T  3974320 aaaatgcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaattgttatctgaaattaagttaagaaactaaaaatgta 3974221  T
Q  137 attttgcca 145  Q
    |||||||||    
T  3974220 attttgcca 3974212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 7610382 - 7610266
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| ||||||||||||  |||| |||||| ||||||||||| | |||||||||       |||||||||||||||| ||||  |||||||||||||| |    
T  7610382 attttaagcttgaaaattcatataaaaatggacaaaaaggactaaattgaaatgaaaaaaagataaaggaccaaactattacctgaaattaagttaaggg 7610283  T
Q  125 actaaaagtataatttt 141  Q
    ||||||||| |||||||    
T  7610282 actaaaagtgtaatttt 7610266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 30129731 - 30129791
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    |||||||||||||||||||||  |||||||||||||| |||||||||| ||||||||||||    
T  30129731 gataaaggaccaaactgttacccgaaattaagttaagggactaaaagtgtaattttgccaa 30129791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 146
Target Start/End: Original strand, 42610976 - 42611097
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||| |||||| || |||||||||       |||||||||||||||||||||  |||||||||||||       
T  42610976 attttaagcttaaaaattcatatgaaaatggacagaaaggatcaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaaga 42611075  T
Q  125 actaaaagtataattttgccaa 146  Q
    ||||||||| ||||||||||||    
T  42611076 actaaaagtgtaattttgccaa 42611097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 6540050 - 6539993
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||    
T  6540050 gataaaggaccaaactgttact-gaaattaagttaagggactaaaagtgtaattttgcc 6539993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 13697437 - 13697318
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||  ||||||||||||| |||||||||       |||||| ||||||||||||||| |||| ||||||||       
T  13697437 attttaagcttaaaaattcatatgaaaattgacaaaaaggaccaaattgaaatgaaaaaaagataaaagaccaaactgttacttgaaaataagttaatga 13697338  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  13697337 actaaaagtgtaattttgcc 13697318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 145
Target Start/End: Complemental strand, 40881576 - 40881461
Alignment:
Q  30 aagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaa 129  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||||||       |||||| || ||||||||||   |||||||||| ||| ||||||    
T  40881576 aagcttgaaaatgtatatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaaagatcaaactgttatctgaaattaagtcaagggactaa 40881477  T
Q  130 aagtataattttgcca 145  Q
    || | ||||| |||||    
T  40881476 aattgtaattatgcca 40881461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 16736998 - 16737120
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||| ||||  |||||||||       |||||| ||||||| | ||||  |||||||||||||| |    
T  16736998 attttaagcttaaaaattcatatgaaaatggacaaaaaagaccgaattgaaatgaaaaaaagataaatgaccaaattattacctgaaattaagttaaggg 16737097  T
Q  125 actaaaagtataattttgccaaa 147  Q
    ||||||||| |||||||||||||    
T  16737098 actaaaagtgtaattttgccaaa 16737120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 122
Target Start/End: Original strand, 33381642 - 33381720
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaag 122  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  ||||||||||||||    
T  33381642 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaag 33381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3974384 - 3974436
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaat 53  Q
    ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  3974384 tctatgtttgcataaaaatagtagatttaaagcttgaaaatgtatatgaaaat 3974436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 2467159 - 2467059
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||  ||||||||||||| ||||||||        |||||||||||||||||||||   ||||||||||||| |||||||| | |||||||||    
T  2467159 atatgaaaatcgacaaaaaggaccaaattgaaattaaaaaaagataaaggaccaaactgttacctaaaattaagttaagggactaaaaatgtaattttgc 2467060  T
Q  144 c 144  Q
    |    
T  2467059 c 2467059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6540156 - 6540202
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatat 47  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||    
T  6540156 tctatgtttggataagaatattagatttgaaacttgaaaatgtatat 6540202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 141
Target Start/End: Original strand, 2426443 - 2426541
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn-gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||||||| ||||||||||||| |||||||||        |||||| |||||||||||||   |||||||||||||| |||||||||| |||||||    
T  2426443 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagataaaagaccaaactgttatctgaaattaagttaagggactaaaagtgtaatttt 2426541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 144
Target Start/End: Original strand, 6541422 - 6541523
Alignment:
Q  43 tatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||||| || ||||||||||||| ||| |||||       ||||||||| |||||||||||   ||||||||||||  |||||||||| ||||||||    
T  6541422 tatatgaaagtggacaaaaaggaccaaattaaaatgaaaaaaagataaaggatcaaactgttacctaaaattaagttaaaggactaaaagtgtaattttg 6541521  T
Q  143 cc 144  Q
    ||    
T  6541522 cc 6541523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 12854675 - 12854574
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn-gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||||||| ||||||||||||| |||||||||        |||||| ||||||||||||||  |||||||||||||  |||||||| | ||||||||    
T  12854675 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagataaaagaccaaactgttacctgaaattaagttaaaggactaaaaatgtaattttg 12854576  T
Q  143 cc 144  Q
    ||    
T  12854575 cc 12854574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 14871929 - 14872046
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn-gataaaggaccaaactgttactagaaattaagttaaga 123  Q
    |||| |||||| |||||  ||||||||||| ||||||| ||||| |||||||||        |||||||||||||||||||||  ||||||||||||||     
T  14871929 attttaagcttaaaaattcatatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaaagataaaggaccaaactgttacctgaaattaagttaagg 14872028  T
Q  124 gactaaaagtataatttt 141  Q
    || ||||| | |||||||    
T  14872029 gattaaaaatgtaatttt 14872046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 3279244 - 3279189
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    |||||||||||||||||||||  ||||||||||| || |||||||||| |||||||    
T  3279244 gataaaggaccaaactgttacctgaaattaagttgagggactaaaagtgtaatttt 3279189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 144
Target Start/End: Complemental strand, 8874483 - 8874344
Alignment:
Q  11 cataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn------gataaaggaccaaactgtt 104  Q
    |||||||||||||||||| ||||||||||||  || |||||||| || |||||||| | ||||||||              ||||||| || ||| ||||    
T  8874483 cataagaatattagatttaaagcttgaaaatacatttgaaaatggactaaaaggacaaaattgaaattaaaaaaaaaaaaagataaagaactaaattgtt 8874384  T
Q  105 actagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||| ||||||||||||||||||||||| | ||||||||||    
T  8874383 acttgaaattaagttaagagactaaaaatgtaattttgcc 8874344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 13577384 - 13577268
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| ||| |||||       |||||| |||||||||||||   |||||||| ||||| |    
T  13577384 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattaaaatgaaaataagataaaagaccaaactgttatctgaaattaaattaaggg 13577285  T
Q  125 actaaaagtataatttt 141  Q
    ||||||| | |||||||    
T  13577284 actaaaaatgtaatttt 13577268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 17759853 - 17759794
Alignment:
Q  87 ataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    ||||||||||||||||||||   ||||||||||||  |||||||| ||||||||||||||    
T  17759853 ataaaggaccaaactgttacctaaaattaagttaaatgactaaaattataattttgccaa 17759794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 42645034 - 42645087
Alignment:
Q  90 aaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||||||||||||  ||||||||||||| ||||||||||| ||||||||||    
T  42645034 aaggaccaaactgttacctgaaattaagttaa-agactaaaagtgtaattttgcc 42645087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 2961013 - 2960891
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  |||| |||||| ||||||||||||| |||||||||       |||||||||| ||||| ||||   ||||||| ||||  |    
T  2961013 attttaagcttaaaaattaatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggactaaactcttacctaaaattaaattaaagg 2960914  T
Q  125 actaaaagtataattttgccaaa 147  Q
    | ||||||| |||||||||||||    
T  2960913 attaaaagtgtaattttgccaaa 2960891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 2969481 - 2969359
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  |||| |||||| ||||||||||||| |||||||||       |||||||||| ||||| ||||   ||||||| ||||  |    
T  2969481 attttaagcttaaaaattaatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggactaaactcttacctaaaattaaattaaagg 2969382  T
Q  125 actaaaagtataattttgccaaa 147  Q
    | ||||||| |||||||||||||    
T  2969381 attaaaagtgtaattttgccaaa 2969359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 13455871 - 13455991
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| | ||||||||||| ||||||||         |||||||| |||||||||||   ||||||||||||| |    
T  13455871 attttaagcttaaaaattcatatgaaaatggataaaaaggaccaaattgaaataaaaaaa--ataaaggatcaaactgttacctaaaattaagttaaggg 13455968  T
Q  125 actaaaagtataattttgccaaa 147  Q
    ||||||| | |||||||||||||    
T  13455969 actaaaaatgtaattttgccaaa 13455991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17759933 - 17759986
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatg 54  Q
    ||||||||| ||||| |||||||||||||||| ||||||||  |||||||||||    
T  17759933 tctatgtttacataaaaatattagatttgaagtttgaaaattcatatgaaaatg 17759986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 131
Target Start/End: Original strand, 18717809 - 18717891
Alignment:
Q  49 aaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaa 131  Q
    |||||||||||||||| ||| ||| |||||       ||||||| ||||||||||||| |||||||||||||||  |||||||    
T  18717809 aaaatgaacaaaaaggtccaaattaaaatgaaaaaaagataaagaaccaaactgttaccagaaattaagttaaggaactaaaa 18717891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 17539557 - 17539518
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaa 40  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  17539557 tctatgtttgcataaaaatattagttttgaagcttgaaaa 17539518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 18707321 - 18707263
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||| ||||||||||||||  |||||||||||||  || ||||||| ||||||||||    
T  18707321 gataaaagaccaaactgttacctgaaattaagttaaaggattaaaagtgtaattttgcc 18707263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 24858659 - 24858717
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||||| |||||||||||  || ||||||||||| || ||||||| ||||||||||    
T  24858659 gataaaggatcaaactgttacctgacattaagttaagggattaaaagtgtaattttgcc 24858717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 40881609 - 40881667
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||||| |||||| |||||  ||||||||||||| || ||||||| ||||||||||    
T  40881609 gataaaggatcaaactattacttaaaattaagttaagggattaaaagtgtaattttgcc 40881667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15858149 - 15858109
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaat 41  Q
    |||||||| | ||||||||||||||||||||| ||||||||    
T  15858149 tctatgttcgtataagaatattagatttgaagtttgaaaat 15858109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23226779 - 23226831
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaat 53  Q
    ||||||||| ||||||||||| | ||||||| |||||||||  ||||||||||    
T  23226779 tctatgtttacataagaatatgaaatttgaaccttgaaaatccatatgaaaat 23226831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 26349282 - 26349226
Alignment:
Q  6 gtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaa 62  Q
    |||| |||| |||| ||||||||||||||||||||| |||||| ||| | |||||||    
T  26349282 gttttcatatgaattttagatttgaagcttgaaaatctatatgcaaaaggacaaaaa 26349226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 91; Significance: 4e-44; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 73544 - 73687
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||    
T  73544 tctatgtttgcataataatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 73643  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  || ||||||||||| |||||||||| ||||||||||    
T  73644 tgttacctgatattaagttaagggactaaaagtgtaattttgcc 73687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 73492 - 73371
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||| ||||| |||||||||       |||||||||||| ||||| ||  |||||||||||||  |    
T  73492 attttaagcttaaaaattcatatgaaaatggacaaaaaagaccaaattgaaatgaaaaaaagataaaggaccacactgtaacctgaaattaagttaaatg 73393  T
Q  125 actaaaagtataattttgccaa 146  Q
    ||||||| ||||||||||||||    
T  73392 actaaaaatataattttgccaa 73371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 4e-44; HSPs: 91)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 38675154 - 38675297
Alignment:
Q  3 tatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactg 102  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||||||||||||||    
T  38675154 tatgtttgtataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactg 38675253  T
Q  103 ttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    ||||  ||||||| |||||| |||||||||| ||||||||||||    
T  38675254 ttacctgaaattatgttaagggactaaaagtgtaattttgccaa 38675297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 20209321 - 20209462
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||  ||||||||||||| |||||||||       |||||||||||||||    
T  20209321 tctatgtttgcataagaatattagattttaagcttgaaaatgtatataaaaatagacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 20209420  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||| |||||||||||||| |||||||||| ||||||||    
T  20209421 tgttacttgaaattaagttaagggactaaaagtgtaattttg 20209462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 44664764 - 44664619
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       |||||||||| |||     
T  44664764 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggactaaat 44664665  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||||    
T  44664664 tgttacctgaaattaagttaagggactaaaagtgtaattttgccaa 44664619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 29434444 - 29434304
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       ||||||||| ||||     
T  29434444 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggatcaaat 29434345  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  |||||||||||||| ||||||||||||||||||    
T  29434344 tgttacctgaaattaagttaagggactaaaagtataatttt 29434304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 46292725 - 46292582
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| || |||||||||       |||||||||||||||    
T  46292725 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggatcaaattgaaatgaaaaaaagataaaggaccaaac 46292626  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  ||||||||||||||  ||||||||| ||||||||||    
T  46292625 tgttacctgaaattaagttaaggaactaaaagtgtaattttgcc 46292582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 11221163 - 11221303
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||       ||||||||||||||     
T  11221163 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatacgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaat 11221262  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  |||||||||||||| || ||||||| |||||||    
T  11221263 tgttacctgaaattaagttaagggattaaaagtgtaatttt 11221303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 15543142 - 15543002
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       |||||||||||||||    
T  15543142 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 15543043  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  ||||||||||||||  | ||||||| |||||||    
T  15543042 tgttacatgaaattaagttaaggaattaaaagtgtaatttt 15543002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 39778454 - 39778596
Alignment:
Q  5 tgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgtt 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||        |||||| |||| |||||||    
T  39778454 tgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaattaaaaaaagataaatgaccgaactgtt 39778553  T
Q  105 actagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||   ||||||||||||| |||||||||| |||||||||||||    
T  39778554 acctaaaattaagttaagggactaaaagtgtaattttgccaaa 39778596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 49002406 - 49002553
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg---nnnnnnngataaaggacca 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| |||||||||          ||||||||||||    
T  49002406 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaatgaccaaattgaaatgaaaaaaaaaagataaaggacca 49002505  T
Q  98 aactgttactagaaattaagttaagagactaaaagtataattttgcca 145  Q
    |||||||||  |||||||||||||| |||||||||||||| |||||||    
T  49002506 aactgttacctgaaattaagttaagggactaaaagtataaatttgcca 49002553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 14463294 - 14463438
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||| ||||||| |||||| |||||||| |||||  ||||||||||||| |||||||||       |||||||||||||||    
T  14463294 tctatgtttgcataagaatattatatttgaaacttgaatatgtatataaaaattgacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 14463393  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcca 145  Q
    ||||||  |||||||||||||| |||||||||| |||||||||||    
T  14463394 tgttacctgaaattaagttaagggactaaaagtgtaattttgcca 14463438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 13997088 - 13997231
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||| |||||       ||||||||||||||     
T  13997088 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaattgacaaaaaggaccaaattaaaatgaaaaaaagataaaggaccaaat 13997187  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||| ||| |||||||| | ||||||||||    
T  13997188 tgttacctgaaattaagtcaagggactaaaaatgtaattttgcc 13997231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 31574424 - 31574567
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||| | ||| |||||||||       ||||||||||||||     
T  31574424 tctatgtttgcataaaaatattagatttgaaacttgaaaatgtatatgaaaatggacaaaaatggccaaattgaaatgaaaaaaagataaaggaccaaat 31574523  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||||| ||||||||||    
T  31574524 tgttacctgaaattaagttaagggactaaaagtgtaattttgcc 31574567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 44920041 - 44919898
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||        |||||| |||||||    
T  44920041 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagataaatgaccaaa 44919942  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    || ||||  |||||||||||||| |||||||| | |||||||||    
T  44919941 ctattacctgaaattaagttaagggactaaaaatgtaattttgc 44919898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 50710846 - 50710703
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||| |||||||||       |||||| ||||||||    
T  50710846 tctatgtttgcataagaatataagatttgaagcttgaaaatgtatttgaaaatggacaaaaaagaccaaattgaaatgaaaaaaagataaaagaccaaac 50710747  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||  |||||||||||||| |||||||||| ||||| ||||    
T  50710746 tgttacctgaaattaagttaagggactaaaagtgtaattctgcc 50710703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 11989658 - 11989517
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       ||||||||||||||     
T  11989658 tctatgtttgcataagaatattatatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaat 11989559  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    | ||||   ||||||||||||| |||||||||| ||||||||    
T  11989558 tattacctaaaattaagttaagggactaaaagtgtaattttg 11989517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 45214548 - 45214681
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaac-aaaaaggaccagattgaaatgnnnnnnngataaaggaccaaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| |||||||||       ||||||||||||||    
T  45214548 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatggaaatggacaaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaa 45214647  T
Q  100 ctgttactagaaattaagttaagagactaaaagt 133  Q
    |||||||  |||||||| ||||| ||||||||||    
T  45214648 ctgttacctgaaattaaattaagggactaaaagt 45214681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 36546246 - 36546102
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||        ||||||||||||||    
T  36546246 tctatgtttgcaaaagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaagaagataaaggaccaaa 36546147  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
     ||||||  |||||||||||||  |||||||| | ||||||||||    
T  36546146 ttgttacctgaaattaagttaaaggactaaaaatgtaattttgcc 36546102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 36562068 - 36562212
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||        ||||||||||||||    
T  36562068 tctatgtttgcaaaagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaagaagataaaggaccaaa 36562167  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
     ||||||  |||||||||||||  |||||||| | ||||||||||    
T  36562168 ttgttacctgaaattaagttaaaggactaaaaatgtaattttgcc 36562212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 41944019 - 41943875
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-nnnnnnngataaaggaccaaa 99  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||| |||||||||        ||||||||||||||    
T  41944019 tctatgtttgcataagaatatttaatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagataaaggaccaaa 41943920  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
     ||||||  |||||||| ||||| |||||||| ||||||||||||    
T  41943919 ttgttacatgaaattaaattaagggactaaaattataattttgcc 41943875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 44036829 - 44036689
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | ||||||||||| |||||||||       |||||||||||||||    
T  44036829 tctatgtttgcataagaatattagatttgaaacttgaaaatgtatataaaaatggataaaaaggaccaaattgaaatg-aaaaaagataaaggaccaaac 44036731  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||  |||||||||||||| || ||||| ||||||||||    
T  44036730 tgttacctgaaattaagttaagggattaaaactataattttg 44036689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 35747835 - 35747689
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||| |||||||||       |||||| ||||||      
T  35747835 tctatgtttgcataagaatataagatttgaagcttgaaaatgtatttgaaaatggacaaaaacgaccaaattgaaatgaaaaaaagataaaagaccaaga 35747736  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||  |||||||||||||||  |||||||| |||||||||||||    
T  35747735 tgttacctgaaattaagttaagaatctaaaagtgtaattttgccaaa 35747689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 45171749 - 45171893
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaat---gnnnnnnngataaaggacca 97  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||           ||||||||||||    
T  45171749 tctatttttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaattaaaaaaaaaagataaaggacca 45171848  T
Q  98 aactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    |||||||||  |||||||||||||  |||||||||| ||||||||    
T  45171849 aactgttacctgaaattaagttaaatgactaaaagtgtaattttg 45171893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 14201939 - 14201796
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||       |||||||||| ||||    
T  14201939 tctatgtttacataaaaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggacgaaac 14201840  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||  |||||||||||     ||||||||| |||||||||||||    
T  14201839 tgttacctgaaattaagtt---gcactaaaagtgtaattttgccaaa 14201796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 21017092 - 21017239
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg----nnnnnnngataaaggacc 96  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||           |||||| ||||    
T  21017092 tctatgtttgcataagagtattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaaaaaagataaatgacc 21017191  T
Q  97 aaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||||||  ||||||||||||||  ||||||||| ||||||||||    
T  21017192 aaactgttacctgaaattaagttaaggaactaaaagtgtaattttgcc 21017239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 15020416 - 15020276
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||       ||||||| |||||||    
T  15020416 tctatgtttgcataataatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaagaccaaatttaaatgaaaaaaagataaagaaccaaac 15020317  T
Q  101 tgtta-ctagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||| || | |||||||||||| |||||||||  |||||||    
T  15020316 tgttatcttg-aattaagttaagggactaaaagagtaatttt 15020276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 45540003 - 45540143
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||       ||||||||||||||     
T  45540003 tctatgtttgcataaaaatattagatttgaagcttgaaaatgtatatgaaattggacaaaaaggaccaaattgaaatggaaaaaagataaaggaccaaat 45540102  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    | ||||  | || ||||||||| |||||||| | |||||||    
T  45540103 tattacctgtaagtaagttaagggactaaaaatgtaatttt 45540143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 2862820 - 2862701
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||||||||||||||||||||||||||||| |||||||||       |||||||||||||||||||||   ||||||||||||| |    
T  2862820 attttaagcttaaaaatgtatatgaaaatgaacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctaaaattaagttaaggg 2862721  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  2862720 actaaaagtgtaattttgcc 2862701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 11439943 - 11439804
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||| |||||||||       |||||| ||||||||    
T  11439943 tctatgtttgcataagaatattagatttgaagtttgaaaatgtatataaaaatggacaaaaatgaccaaattgaaatg-aaaaaagataaaagaccaaac 11439845  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    |||||   |||||||||||||| |||||||| | |||||||    
T  11439844 tgttatctgaaattaagttaagggactaaaaatgtaatttt 11439804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 6954140 - 6954008
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||       ||||||| ||||||     
T  6954140 tctatgtttgtataagaatattagatttgaagcttgaaaatgtatatgaaaatggactaaaaggaccaaattgaaatgaaaaaaagataaagaaccaaat 6954041  T
Q  101 tgtta-ctagaaattaagttaagagactaaaagt 133  Q
    ||||| ||| ||||||||||||  ||||||||||    
T  6954040 tgttatcta-aaattaagttaaaggactaaaagt 6954008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 144
Target Start/End: Original strand, 32809301 - 32809433
Alignment:
Q  11 cataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactaga 110  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||| |||||||||       |||||| ||||||||||||||  ||    
T  32809301 cataagaatattagatttgaagtttgaaaatgtatatgaaaatggacaaaaagaaccaaattgaaatgaaaaaaagataaa-gaccaaactgttacctga 32809399  T
Q  111 aattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||||||  ||| |||||| ||||||||||    
T  32809400 aattaagttaatggaccaaaagtgtaattttgcc 32809433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 27812738 - 27812882
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaat----gnnnnnnngataaaggacc 96  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||| ||||            |||||||||||    
T  27812738 tctatgtttgcataagaatattagatttgaaacttgaaaatgtatatgaaaatggacaataaggaccaaattaaaataaaaaaagaaaagataaaggacc 27812837  T
Q  97 aaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    |||||||||   |||||||||||||| |||||||||| |||||||    
T  27812838 aaactgttatctgaaattaagttaagggactaaaagtgtaatttt 27812882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 20209269 - 20209147
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |    
T  20209269 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaggg 20209170  T
Q  125 actaaaagtataattttgccaaa 147  Q
    ||||||||| |||||||||||||    
T  20209169 actaaaagtgtaattttgccaaa 20209147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 28843875 - 28843798
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||    
T  28843875 tctatgtttgcataagaatattagatttgaagtttgaaaatgtatatgaaaatggataaaaaggaccaaattgaaatg 28843798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 35415437 - 35415559
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||| |||||||||       |||||| ||||||||||||||  |||||||||||||| |    
T  35415437 attttaagcttgaaaatgtatatgaaaatggacagaaaggaccaaattgaaatgaaaaaaagataaaagaccaaactgttacctgaaattaagttaaggg 35415536  T
Q  125 actaaaagtataattttgccaaa 147  Q
    ||||||| | |||||||||||||    
T  35415537 actaaaaatgtaattttgccaaa 35415559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 25061471 - 25061535
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaagga 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  25061471 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaagga 25061535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 11221111 - 11220990
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||||||||||||||||||||||| ||| | |||||||||       ||||||||| |||||||||||   ||||||||||||| |    
T  11221111 attttaagcttaaaaatgtatatgaaaatgaacaaaaatgacaaaattgaaatgaaaaaaagataaaggatcaaactgttacctaaaattaagttaaggg 11221012  T
Q  125 actaaaagtataattttgccaa 146  Q
    ||||||||| ||||||||||||    
T  11221011 actaaaagtgtaattttgccaa 11220990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 44976924 - 44977064
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatg-tatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaa 99  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||| | |||||||| || |||||||||       ||||||||| ||||    
T  44976924 tctatgtttgaataagaatattagatttgaagcttgaaaatgttatatgaaaatggataaaaaggatcaaattgaaatg-aaaaaagataaagga-caaa 44977021  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    |||||||   | |||||||||||| | ||||||||||||||||    
T  44977022 ctgttacctaacattaagttaagaaaataaaagtataattttg 44977064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 44 - 144
Target Start/End: Original strand, 50711209 - 50711309
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||||||||| |||||||||| |||||||||    
T  50711209 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgc 50711308  T
Q  144 c 144  Q
    |    
T  50711309 c 50711309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 147
Target Start/End: Complemental strand, 49002337 - 49002234
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  ||| |||||||||| |||||||||| |||||||||    
T  49002337 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaagttaagttaagggactaaaagtgtaattttgc 49002238  T
Q  144 caaa 147  Q
    ||||    
T  49002237 caaa 49002234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 45567579 - 45567656
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||| |||||| ||||||| ||||| |||||||||    
T  45567579 tctatgtttgcataaaaatattagatttgaaggttgaaaatgtatataaaaatggacaaaaatgaccaaattgaaatg 45567656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 18168897 - 18168822
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaat 77  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | |||||| ||||||||||||| ||||||||    
T  18168897 tctatgtttgcataagaatataagatttgaagcttgaaaatgtat-ttaaaatggacaaaaaggaccaaattgaaat 18168822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 18461763 - 18461613
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg----nnnnnnngataaaggacc 96  Q
    ||||| ||||||||||||||||||||||||   ||||||||||||||||||||| ||| |||| |||| |||||||||           |||||||| ||    
T  18461763 tctatatttgcataagaatattagatttgatatttgaaaatgtatatgaaaatggacagaaagaaccaaattgaaatgaaaaaaaaaaagataaaggtcc 18461664  T
Q  97 aaactgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||| ||||||   |||||||| |||| ||||||||||||||||||||||||    
T  18461663 aaattgttacctaaaattaaggtaagggactaaaagtataattttgccaaa 18461613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 46292777 - 46292893
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||| ||||| |||||||||       |||||||||||||||| ||||  |||||||| |||||||    
T  46292777 atttcaagcttaaaaattcatatgaaaatggacaaaaaagaccaaattgaaatgaaaaaaagataaaggaccaaactattacctgaaattaaattaagag 46292876  T
Q  125 actaaaagtataatttt 141  Q
    |||||||||||||||||    
T  46292877 actaaaagtataatttt 46292893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 38675100 - 38674981
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| ||| | |||||||||||| ||||||||||||| ||||||||        |||||||||||||||||||||  |||||||||||||| |    
T  38675100 attttaagcttaaaattttatatgaaaatggacaaaaaggaccaaattgaaattaaaaaaagataaaggaccaaactgttacctgaaattaagttaaggg 38675001  T
Q  125 actaaaagtataattttgcc 144  Q
    | ||||||| ||||||||||    
T  38675000 attaaaagtgtaattttgcc 38674981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 18678032 - 18677915
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||||||||||  |||||||| ||||| |    
T  18678032 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaaattaaggg 18677933  T
Q  125 actaaaagtataattttg 142  Q
    ||||||| | ||||||||    
T  18677932 actaaaaatgtaattttg 18677915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 26845031 - 26844896
Alignment:
Q  7 tttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgtta- 105  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||  |||| ||| |||||       ||||||| ||||||| ||||     
T  26845031 tttgcataagaatattagattagaagtttgaaaatgtatatgaaaatggacaaaaa-taccaaattaaaatgaaaaaaagataaagcaccaaacagttat 26844933  T
Q  106 ctagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||| ||||||| ||||| |||||||| |||||||||||    
T  26844932 cta-aaattaaattaagggactaaaaatataattttgc 26844896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 45567527 - 45567410
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| ||||| |||||||||||| ||||||||||||| |||||||||       |||||| ||| ||||||||||   ||||||||||||| |    
T  45567527 attttaagcttaaaaatttatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaagactaaactgttacctaaaattaagttaaggg 45567428  T
Q  125 actaaaagtataattttg 142  Q
    ||||||||| ||||||||    
T  45567427 actaaaagtgtaattttg 45567410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 50711039 - 50711173
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||             |||||||||| |||||||||       |||||||| ||||||    
T  50711039 tctatgtttgcataagaatataagatttgaagcttgaaaatggatt------------aaaaggaccaaattgaaatgaaaaaaagataaaggtccaaac 50711126  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaaa 147  Q
    ||||||  |||||||||||||| |||||||||| |||||||||||||    
T  50711127 tgttacctgaaattaagttaagggactaaaagtgtaattttgccaaa 50711173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 53712422 - 53712559
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||| || |||||||||||| ||| ||||||||||||||||||||| ||||||| ||||| ||| |||||        |||||||| |||||    
T  53712422 tctatgtttgcagaaaaatattagatttaaagtttgaaaatgtatatgaaaatggacaaaaa-gaccaaattaaaatgaaaaa---ataaaggatcaaac 53712517  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    || |||  |||||||||||||| |||||||| | ||||||||    
T  53712518 tgctacctgaaattaagttaagtgactaaaaatgtaattttg 53712559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 29434496 - 29434612
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||| ||||| |||||||||       |||||||||||||||||||||  |||||||||||||  |    
T  29434496 attttaagcttaaaaattcatatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaaggaccaaactgttacctgaaattaagttaaagg 29434595  T
Q  125 actaaaagtataatttt 141  Q
    ||||||||| |||||||    
T  29434596 actaaaagtgtaatttt 29434612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 35747887 - 35748003
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||| ||||| |||||||||       |||||||||||||||||||||  ||||||||||||||      
T  35747887 attttaagcttaaaaattcatatgaaaatggacaaaaatgaccaaattgaaatgaaaaatagataaaggaccaaactgttacctgaaattaagttaagga 35747986  T
Q  125 actaaaagtataatttt 141  Q
    ||||||||| |||||||    
T  35747987 actaaaagtgtaatttt 35748003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 25061420 - 25061301
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| ||| |||||       |||||||||||||| ||||||  |||||||||||||| |    
T  25061420 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattaaaatgaaaaaaagataaaggaccaaattgttacctgaaattaagttaaggg 25061321  T
Q  125 actaaaagtataattttgcc 144  Q
    || |||||| ||||||||||    
T  25061320 accaaaagtgtaattttgcc 25061301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 27812686 - 27812567
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||||| ||||   |||||||||||||      
T  27812686 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactattacctaaaattaagttaagga 27812587  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  27812586 actaaaagtgtaattttgcc 27812567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 44976872 - 44976753
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||||||||||||||| | ||||| ||||| |||||||||       |||||| ||||||||||||||   ||||||||||||| |    
T  44976872 attttaagcttaaaaatgtatatgaaaatggataaaaatgaccaaattgaaatgaaaaaaagataaaagaccaaactgttacataaaattaagttaaggg 44976773  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||| | ||||||||||    
T  44976772 actaaaactgtaattttgcc 44976753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 14463222 - 14463124
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||||| ||||| |||||||||| ||| |||||||| | ||||||||    
T  14463222 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactattacttgaaattaagtcaagggactaaaaatgtaattttg 14463124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 14626272 - 14626203
Alignment:
Q  8 ttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaat 77  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||| |||||||||| || ||||||||    
T  14626272 ttgcataagaatatttaatttaaagcttgaaaatgtatatgaaaatggacaaaaaggatcaaattgaaat 14626203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 143
Target Start/End: Complemental strand, 32809273 - 32809155
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||||||| ||||||  |||||||| ||||| |    
T  32809273 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaattgttacctgaaattaaattaaggg 32809174  T
Q  125 actaaaagtataattttgc 143  Q
    || |||||| |||||||||    
T  32809173 accaaaagtgtaattttgc 32809155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 14201991 - 14202110
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||| | ||| |||||       ||||||||| ||||||||||   |||||||||||||| |    
T  14201991 attttaagcttaaaaattcatatgaaaatggacaaaaaggactaaattaaaatgaaaaaaagataaaggatcaaactgttatctgaaattaagttaaggg 14202090  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  14202091 actaaaagtgtaattttgcc 14202110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 25061534 - 25061592
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||||||||||||||||  |||||||||||||||||| |||||| ||||||||||    
T  25061534 gataaaggaccaaactgttacctgaaattaagttaagagaccaaaagtgtaattttgcc 25061592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 28843927 - 28844046
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||| ||||| |||||||||       |||||||||||||| ||||    |||||||||||||| |    
T  28843927 attttaagcttaaaaattcatatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaaggaccaaattgttgtctgaaattaagttaaggg 28844026  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  28844027 actaaaagtgtaattttgcc 28844046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 44664816 - 44664935
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       |||||||||| || |||||||   ||||||| ||||| |    
T  44664816 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggactaatctgttacctaaaattaaattaaggg 44664915  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||||||||    
T  44664916 actaaaagtgtaattttgcc 44664935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 147
Target Start/End: Original strand, 44920112 - 44920215
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       |||||||||||||| |||| |  |||||||||||||| |||||||| | ||||||| |    
T  44920112 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaattgttgcctgaaattaagttaagggactaaaaatgtaattttac 44920211  T
Q  144 caaa 147  Q
    ||||    
T  44920212 caaa 44920215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 45214477 - 45214378
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnn-gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttg 142  Q
    ||||||||||| ||||||||||||| |||||||||        ||||||||||||||||||||   |||||||||||||| |||||||||| ||||||||    
T  45214477 atatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaagataaaggaccaaactgttaactgaaattaagttaagggactaaaagtgtaattttg 45214378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 144
Target Start/End: Complemental strand, 45539951 - 45539832
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  |||| |||||| ||||||| ||||| ||||||||        ||||||||||||||||||| |  |||||||||||||| |    
T  45539951 attttaagcttaaaaattcatataaaaatggacaaaaatgaccaaattgaaataaaaaaaagataaaggaccaaactgttgcctgaaattaagttaaggg 45539852  T
Q  125 actaaaagtataattttgcc 144  Q
    |||||| |||||||||||||    
T  45539851 actaaaggtataattttgcc 45539832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 6954192 - 6954309
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgtta-ctagaaattaagttaaga 123  Q
    |||| |||||| ||||||||||| |||||| |||||||||| || |||||||||       |||||| ||||||| ||||| ||| |||||||||||||     
T  6954192 attttaagctttaaaatgtatataaaaatggacaaaaaggatcaaattgaaatgaaaaaaagataaatgaccaaattgttatcta-aaattaagttaagg 6954290  T
Q  124 gactaaaagtataattttg 142  Q
    |||||||||| ||||||||    
T  6954291 gactaaaagtgtaattttg 6954309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 18168949 - 18169071
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  |||| |||||  | ||||||||||| |||||||||       |||||| |||||||||||||   |||||||||||||| |    
T  18168949 attttaagcttaaaaattcatataaaaatagataaaaaggaccaaattgaaatgaaaaaaagataaatgaccaaactgttatctgaaattaagttaaggg 18169048  T
Q  125 actaaaagtataattttgccaaa 147  Q
    ||||||||| |||||||||||||    
T  18169049 actaaaagtgtaattttgccaaa 18169071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 39778398 - 39778277
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||| ||||| |||||||||       |||||| ||| ||||||||||  ||||||||||||||||    
T  39778398 attttaagcttaaaaattcatatgaaaatggacaaaaaagaccaaattgaaatgaaaaaa-gataaatgactaaactgttacctgaaattaagttaagag 39778300  T
Q  125 actaaaagtataattttgccaaa 147  Q
     |||||||| | |||||||||||    
T  39778299 gctaaaagtgttattttgccaaa 39778277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 133
Target Start/End: Complemental strand, 45171697 - 45171589
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| |||||||||| || ||| |||||       |||||||||||||| ||||||  |||||||||||||| |    
T  45171697 attttaagcttaaaaattcatatgaaaatggacaaaaaggaacaaattaaaatgaaaaaaagataaaggaccaaattgttacccgaaattaagttaaggg 45171598  T
Q  125 actaaaagt 133  Q
    |||||||||    
T  45171597 actaaaagt 45171589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 50710947 - 50710892
Alignment:
Q  89 aaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    ||||||||||||||||||  |||||||||||||| |||||||||| ||||||||||    
T  50710947 aaaggaccaaactgttacctgaaattaagttaagggactaaaagtgtaattttgcc 50710892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 15543194 - 15543313
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||| || || ||| |||||       ||||||||| |||||||||||  |||||||||||||| |    
T  15543194 attttaagcttaaaaattcatatgaaaatggacaaaaatgatcaaattaaaatgaaaaaaagataaaggatcaaactgttacctgaaattaagttaaggg 15543293  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||||| ||||| ||||    
T  15543294 actaaaagtgtaattatgcc 15543313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 26845085 - 26845204
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||||||||||||||| ||||||| ||||| ||| |||||        ||||||||||||| ||||||   |||||||||| || |    
T  26845085 attttaagcttaaaaatgtatatgaaaatggacaaaaaagaccaaattaaaatggaaaaaatataaaggaccaaattgttacctaaaattaagttgaggg 26845184  T
Q  125 actaaaagtataattttgcc 144  Q
    ||||||| | ||||||||||    
T  26845185 actaaaattgtaattttgcc 26845204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2773327 - 2773368
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatg 42  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  2773327 tctatgtttgcataagaatataagatttgaagcttgaaaatg 2773368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 48738170 - 48738247
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    |||||||||||||| ||||||||||||||||| |||||||| |||||| ||||   |||||||||  | |||||||||    
T  48738170 tctatgtttgcatatgaatattagatttgaagtttgaaaatctatatgcaaataggcaaaaaggataaaattgaaatg 48738247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 143
Target Start/End: Original strand, 11989722 - 11989830
Alignment:
Q  37 aaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttac--tagaaattaagttaagagactaaaagta 134  Q
    ||||| |||||||||||| ||||||| ||||| |||||||||       |||||||||| ||||||||||   | ||||||||| |||||| |||||||     
T  11989722 aaaatttatatgaaaatggacaaaaatgaccaaattgaaatgaaaaaaagataaaggacgaaactgttacctgaaaaattaagtgaagagattaaaagtg 11989821  T
Q  135 taattttgc 143  Q
    |||||||||    
T  11989822 taattttgc 11989830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 141
Target Start/End: Complemental strand, 53712370 - 53712254
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||||| ||| ||||| ||||||| ||||| ||| |||||       ||||||||| |||||||||||   ||||||||||||| |    
T  53712370 attttaagcttaaaaatgtacatgcaaatggacaaaaatgaccaaattaaaatgaaaaaaagataaaggatcaaactgttacctaaaattaagttaaggg 53712271  T
Q  125 actaaaagtataatttt 141  Q
    ||||||| | |||||||    
T  53712270 actaaaactgtaatttt 53712254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 2862872 - 2862906
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagctt 35  Q
    |||||||||||||||||||||||||||||||||||    
T  2862872 tctatgtttgcataagaatattagatttgaagctt 2862906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 8084810 - 8084748
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaag 63  Q
    |||||||||||| || ||||||||||||||||||| |||||| |||| ||||||  |||||||    
T  8084810 tctatgtttgcacaacaatattagatttgaagcttcaaaatgaatataaaaatggtcaaaaag 8084748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 31574309 - 31574251
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||||||||||||||||   ||||||||||||| || ||||| ||||||||||||    
T  31574309 gataaaggaccaaactgttacctaaaattaagttaagggattaaaaatataattttgcc 31574251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2397929 - 2397876
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatg 54  Q
    ||||| ||| |||||||||||||||||||||| ||||||||  |||||||||||    
T  2397929 tctatatttacataagaatattagatttgaagtttgaaaatccatatgaaaatg 2397876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 21017021 - 21016924
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||||||| ||||||| ||||| ||| |||||       |||||| |||||| |||||||  |||||||| ||||| || |||||||||||||||    
T  21017021 atatgaaaatggacaaaaaagaccaaattaaaatgaaaaaaagataaatgaccaatctgttacctgaaattaaattaagggattaaaagtataatttt 21016924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 44036941 - 44037001
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    |||||| ||||||||||||||  ||||||||  ||||||||||||||| ||||||| ||||    
T  44036941 gataaatgaccaaactgttacctgaaattaaactaagagactaaaagtgtaattttaccaa 44037001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 14626187 - 14626128
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcca 145  Q
    ||||||||||||||||||||   |||||||| ||||| |||||||| | |||||||||||    
T  14626187 gataaaggaccaaactgttatctgaaattaaattaagggactaaaaatgtaattttgcca 14626128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 18678118 - 18678214
Alignment:
Q  47 tgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    |||||||| ||||||||||||| |||||||||       ||||||| ||||| ||||||   ||||||||||||||  | ||||||| |||||||||    
T  18678118 tgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaagtaccaagctgttatctgaaattaagttaaggaattaaaagtgtaattttgc 18678214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 40612410 - 40612367
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgta 44  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||    
T  40612410 tctatgtttgcataataattttagatttgaaggttgaaaatgta 40612367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 2773401 - 2773459
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||||||||  ||||||  ||||||||||||| | ||||||||| ||||||||||    
T  2773401 gataaaggaccaagttgttacctgaaattaagttaataaactaaaagtgtaattttgcc 2773459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43378301 - 43378339
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaa 39  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  43378301 tctatgtttgcataacaatattatatttgaagcttgaaa 43378339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 144
Target Start/End: Complemental strand, 2579217 - 2579095
Alignment:
Q  22 tagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaa 121  Q
    ||||||| ||||||||||||  ||||| ||||  || |||||||| | |||||||||       ||||||||||||||  ||||||  ||||||||||||    
T  2579217 tagatttaaagcttgaaaattcatatgcaaatagaccaaaaggacaaaattgaaatgaaaaaaagataaaggaccaaatcgttacttaaaattaagttaa 2579118  T
Q  122 gagactaaaagtataattttgcc 144  Q
    | || ||||| | ||| ||||||    
T  2579117 gggattaaaaatgtaaatttgcc 2579095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 18678084 - 18678125
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatg 42  Q
    ||||||||||||||| ||||| |||||||||| |||||||||    
T  18678084 tctatgtttgcataaaaatataagatttgaagtttgaaaatg 18678125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42619905 - 42619852
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatg 54  Q
    |||||||||||||| ||||||||| |||| |||||||||||  ||||| |||||    
T  42619905 tctatgtttgcatatgaatattaggtttggagcttgaaaattcatatgcaaatg 42619852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 36546336 - 36546380
Alignment:
Q  87 ataaaggaccaaactgttactagaaattaagttaagagactaaaa 131  Q
    |||||||| |||||||||||  ||||||||||||| |||||||||    
T  36546336 ataaaggatcaaactgttacctgaaattaagttaaaagactaaaa 36546380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 36561978 - 36561934
Alignment:
Q  87 ataaaggaccaaactgttactagaaattaagttaagagactaaaa 131  Q
    |||||||| |||||||||||  ||||||||||||| |||||||||    
T  36561978 ataaaggatcaaactgttacctgaaattaagttaaaagactaaaa 36561934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 323584 - 323723
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || ||| |||||       |||||||||||||||    
T  323584 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatggacaaaaaagatcaaattaaaatg-aaaaaagataaaggaccaaac 323682  T
Q  101 tgttactagaaattaagttaagagactaaaagtataatttt 141  Q
    ||||||  |||||||||||||| |||||||| |||||||||    
T  323683 tgttacctgaaattaagttaagggactaaaaatataatttt 323723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 144
Target Start/End: Complemental strand, 323480 - 323422
Alignment:
Q  86 gataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  323480 gataaaggacaaaactgttacctgaaattaagttaagagactaaaagtgtaattttgcc 323422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 258926 - 259071
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| |||||||||       |||||||||||||||    
T  258926 tctatgtttgcataagaatattagatttgaagcttgaaaatatatatgaaaatggacaaaaagaaccaaattgaaatgaaaaaaagataaaggaccaaac 259025  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    | |||   |||||||||||||  ||||| |||| ||||||||||||    
T  259026 tattatatgaaattaagttaaaggactagaagtgtaattttgccaa 259071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 147
Target Start/End: Complemental strand, 258874 - 258752
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  ||||||||||| ||||||||||||| |||||||||       ||||| |||||||||||||||  |||||||||||||| |    
T  258874 attttaagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataatggaccaaactgttacctgaaattaagttaaggg 258775  T
Q  125 actaaaagtataattttgccaaa 147  Q
    | |||||||||||||||||||||    
T  258774 attaaaagtataattttgccaaa 258752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 108027 - 108172
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | ||||||||||| |||||||||        ||||||||||||||    
T  108027 tctatgtttgcataagaatattagatttgaaacttgaaaatgtatataaaaatggataaaaaggaccaaattgaaatgaaaaaaaaataaaggaccaaac 108126  T
Q  101 tgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    || |||  |||||||||||||| |||| ||| | ||||||||||||    
T  108127 tgatacctgaaattaagttaagggactgaaaatgtaattttgccaa 108172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 144
Target Start/End: Complemental strand, 107971 - 107852
Alignment:
Q  30 aagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg-----nnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||||| |||||  ||||||||||| ||||||||||||| |||||||||            |||||||||||||||||||||  |||||||||||||| |    
T  107971 aagcttaaaaattcatatgaaaatggacaaaaaggaccaaattgaaatgaaaaaaaaaaaagataaaggaccaaactgttacctgaaattaagttaaggg 107872  T
Q  125 actaaaagtataattttgcc 144  Q
    | ||||||| ||||||||||    
T  107871 attaaaagtgtaattttgcc 107852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 4505 - 4356
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg----nnnnnnngataaaggacc 96  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||| |||||||||           ||||||||||     
T  4505 tctatgtttgcataagaatattagatttgaagcttaaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaaaaaagataaaggaca 4406  T
Q  97 aaactgttactagaaattaagttaagagactaaaagtataattttgccaa 146  Q
    ||||| ||||| ||||||||||||||  ||||||||| ||||||| ||||    
T  4405 aaactattacttgaaattaagttaaggaactaaaagtgtaattttaccaa 4356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 41422 - 41322
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||       |||||||||||||||    
T  41422 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaac 41323  T
Q  101 t 101  Q
    |    
T  41322 t 41322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 141
Target Start/End: Original strand, 41474 - 41590
Alignment:
Q  25 atttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagag 124  Q
    |||| |||||| |||||  |||||||||||||||||||||| || |||||||||       ||||||| ||||||||||||   |||||||||||||| |    
T  41474 attttaagcttaaaaattcatatgaaaatgaacaaaaaggaacaaattgaaatgaaaataagataaagaaccaaactgttatgtgaaattaagttaaggg 41573  T
Q  125 actaaaagtataatttt 141  Q
    ||||||| | |||||||    
T  41574 actaaaaatgtaatttt 41590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 30917 - 30852
Alignment:
Q  41 tgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttac 106  Q
    ||||||| |||||| ||||||||||||| |||||||||       |||||||||||||||||||||    
T  30917 tgtatataaaaatggacaaaaaggaccaaattgaaatgaaaaaaagataaaggaccaaactgttac 30852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 257863 - 258002
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnnga-taaaggaccaaa 99  Q
    ||||||||||||||||||||| ||||||||||||||||||| || ||||||||| ||||||| ||||| |||||||||       || ||||||||||||    
T  257863 tctatgtttgcataagaatataagatttgaagcttgaaaatataaatgaaaatggacaaaaaagaccaaattgaaatgaaaaaaagattaaaggaccaaa 257962  T
Q  100 ctgttactagaaattaagttaagagactaaaagtataattttgcc 144  Q
     | ||||     ||||||||||| |||||||||| ||||||||||    
T  257963 ttattac-----attaagttaagggactaaaagtgtaattttgcc 258002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10062 - 9985
Alignment:
Q  1 tctatgtttgcataagaatattagatttgaagcttgaaaatgtatatgaaaatgaacaaaaaggaccagattgaaatg 78  Q
    |||||||||| ||||||||| |||||||||||||||||||| ||||| |||||| | ||||||||||| |||||||||    
T  10062 tctatgtttgtataagaatactagatttgaagcttgaaaatatatataaaaatggataaaaaggaccaaattgaaatg 9985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 144
Target Start/End: Original strand, 10133 - 10233
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| |||||||  |||| |||||||||       |||||||||||||| |||||   |||||||||||||| || |||||||||||||||||    
T  10133 atatgaaaatggacaaaaaacaccaaattgaaatgacaaaaagataaaggaccaaattgttatctgaaattaagttaagggattaaaagtataattttgc 10232  T
Q  144 c 144  Q
    |    
T  10233 c 10233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 44970 - 44870
Alignment:
Q  44 atatgaaaatgaacaaaaaggaccagattgaaatgnnnnnnngataaaggaccaaactgttactagaaattaagttaagagactaaaagtataattttgc 143  Q
    ||||||||||| ||||||||||||| |||||||||       ||||||||||||||||||||   |||||||||||||| || |||||||  ||||||||    
T  44970 atatgaaaatggacaaaaaggaccaaattgaaatgaagaaaagataaaggaccaaactgttatctgaaattaagttaagggattaaaagtgcaattttgc 44871  T
Q  144 c 144  Q
    |    
T  44870 c 44870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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