View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17941_low_46 (Length: 241)

Name: NF17941_low_46
Description: NF17941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17941_low_46
NF17941_low_46
[»] chr2 (59 HSPs)
chr2 (44-225)||(13149489-13149670)
chr2 (102-215)||(9496033-9496146)
chr2 (104-225)||(41545562-41545683)
chr2 (102-226)||(30743685-30743809)
chr2 (102-215)||(12882047-12882160)
chr2 (102-215)||(43573132-43573244)
chr2 (103-215)||(19336896-19337008)
chr2 (102-225)||(31959678-31959801)
chr2 (102-174)||(17429258-17429330)
chr2 (109-225)||(38430041-38430157)
chr2 (102-225)||(3866229-3866352)
chr2 (102-225)||(12734857-12734980)
chr2 (3-50)||(13150275-13150322)
chr2 (102-225)||(25834835-25834958)
chr2 (102-225)||(28508835-28508958)
chr2 (102-225)||(41197229-41197352)
chr2 (102-211)||(45367627-45367736)
chr2 (102-225)||(2610745-2610868)
chr2 (146-217)||(4682224-4682294)
chr2 (102-225)||(35643105-35643228)
chr2 (102-225)||(38435109-38435232)
chr2 (102-188)||(9531602-9531688)
chr2 (102-224)||(30306190-30306312)
chr2 (101-183)||(34931631-34931713)
chr2 (143-225)||(39029738-39029820)
chr2 (103-226)||(45077883-45078008)
chr2 (102-211)||(227360-227469)
chr2 (102-226)||(11412864-11412990)
chr2 (102-211)||(11992110-11992219)
chr2 (102-215)||(18959078-18959191)
chr2 (102-182)||(10516751-10516831)
chr2 (146-221)||(1400503-1400578)
chr2 (102-225)||(7326162-7326285)
chr2 (102-225)||(33287578-33287701)
chr2 (101-225)||(35755246-35755374)
chr2 (135-225)||(9996661-9996751)
chr2 (135-225)||(26670925-26671015)
chr2 (104-174)||(33504432-33504502)
chr2 (102-199)||(3635325-3635422)
chr2 (133-174)||(9864116-9864157)
chr2 (137-221)||(6219126-6219210)
chr2 (137-225)||(12141701-12141789)
chr2 (102-226)||(23997758-23997882)
chr2 (102-214)||(45543075-45543186)
chr2 (102-225)||(3243655-3243778)
chr2 (147-226)||(11744679-11744758)
chr2 (102-225)||(18424380-18424502)
chr2 (110-225)||(26784350-26784465)
chr2 (102-184)||(12520064-12520146)
chr2 (154-220)||(17581621-17581687)
chr2 (102-184)||(19863432-19863514)
chr2 (102-184)||(19867764-19867846)
chr2 (102-184)||(19872665-19872747)
chr2 (159-225)||(31254445-31254511)
chr2 (102-211)||(38328372-38328479)
chr2 (138-174)||(335750-335786)
chr2 (102-210)||(4807767-4807875)
chr2 (102-174)||(9647613-9647685)
chr2 (102-174)||(12474929-12475001)
[»] chr7 (77 HSPs)
chr7 (102-225)||(24598190-24598312)
chr7 (140-225)||(35922410-35922495)
chr7 (102-214)||(40979930-40980042)
chr7 (102-220)||(36101779-36101897)
chr7 (103-225)||(45601633-45601755)
chr7 (102-225)||(21078074-21078197)
chr7 (102-225)||(27648937-27649060)
chr7 (102-215)||(9210706-9210819)
chr7 (102-226)||(27893565-27893689)
chr7 (102-210)||(43491480-43491588)
chr7 (102-225)||(12841277-12841400)
chr7 (102-225)||(43281831-43281954)
chr7 (102-225)||(45836484-45836607)
chr7 (102-225)||(46355858-46355981)
chr7 (135-225)||(28627968-28628058)
chr7 (137-218)||(37976399-37976480)
chr7 (102-226)||(32631720-32631844)
chr7 (137-225)||(36239833-36239921)
chr7 (102-174)||(40008433-40008505)
chr7 (102-174)||(47185810-47185881)
chr7 (102-225)||(2885724-2885847)
chr7 (102-225)||(11594117-11594240)
chr7 (102-225)||(29650541-29650664)
chr7 (102-225)||(34869577-34869700)
chr7 (102-225)||(35558995-35559118)
chr7 (135-210)||(42969870-42969945)
chr7 (102-211)||(15682345-15682454)
chr7 (102-215)||(25731476-25731589)
chr7 (137-225)||(44401164-44401250)
chr7 (104-216)||(6072218-6072329)
chr7 (137-225)||(14057635-14057723)
chr7 (137-225)||(14367663-14367751)
chr7 (146-210)||(21517426-21517490)
chr7 (102-210)||(34035156-34035264)
chr7 (102-162)||(44425210-44425270)
chr7 (102-225)||(44855176-44855297)
chr7 (102-226)||(48919268-48919392)
chr7 (102-225)||(7273257-7273380)
chr7 (102-189)||(28208330-28208417)
chr7 (102-225)||(31681022-31681145)
chr7 (102-225)||(31682604-31682727)
chr7 (102-225)||(33349808-33349931)
chr7 (102-225)||(39906374-39906497)
chr7 (102-215)||(33732001-33732112)
chr7 (146-215)||(8492282-8492351)
chr7 (146-215)||(8519092-8519161)
chr7 (102-215)||(36136931-36137044)
chr7 (135-220)||(40415169-40415254)
chr7 (102-226)||(38607148-38607272)
chr7 (102-225)||(42187598-42187721)
chr7 (102-182)||(48515475-48515555)
chr7 (102-201)||(2882738-2882837)
chr7 (135-226)||(28541979-28542070)
chr7 (102-225)||(36652149-36652272)
chr7 (102-225)||(37618102-37618225)
chr7 (102-225)||(38900114-38900236)
chr7 (135-186)||(44951351-44951402)
chr7 (102-220)||(1011209-1011326)
chr7 (146-220)||(1569178-1569252)
chr7 (102-164)||(6263477-6263539)
chr7 (176-214)||(18795855-18795893)
chr7 (135-185)||(26332908-26332958)
chr7 (139-185)||(26763213-26763259)
chr7 (135-185)||(30814160-30814210)
chr7 (117-211)||(31859046-31859140)
chr7 (107-225)||(35906208-35906326)
chr7 (102-167)||(9796299-9796364)
chr7 (144-225)||(28355322-28355403)
chr7 (105-206)||(33073105-33073206)
chr7 (135-216)||(33103092-33103173)
chr7 (102-207)||(47652722-47652827)
chr7 (135-204)||(47852265-47852334)
chr7 (102-174)||(4604755-4604827)
chr7 (102-206)||(38103617-38103719)
chr7 (138-214)||(38135251-38135327)
chr7 (143-215)||(47848840-47848912)
chr7 (137-225)||(49029433-49029521)
[»] chr4 (65 HSPs)
chr4 (103-214)||(1793630-1793741)
chr4 (102-225)||(51421887-51422010)
chr4 (102-225)||(6957755-6957878)
chr4 (102-225)||(56375447-56375570)
chr4 (102-220)||(55007908-55008026)
chr4 (102-225)||(1777019-1777142)
chr4 (102-225)||(26037507-26037630)
chr4 (107-225)||(39708590-39708708)
chr4 (102-211)||(436400-436509)
chr4 (102-225)||(8286596-8286719)
chr4 (102-225)||(16003083-16003206)
chr4 (102-225)||(35690428-35690551)
chr4 (102-173)||(55771719-55771790)
chr4 (102-173)||(55835955-55836026)
chr4 (102-211)||(28236353-28236462)
chr4 (102-214)||(27450182-27450293)
chr4 (117-225)||(37773468-37773576)
chr4 (143-215)||(53518366-53518438)
chr4 (105-185)||(53540487-53540567)
chr4 (102-185)||(12443292-12443375)
chr4 (102-225)||(26024852-26024975)
chr4 (102-225)||(52569517-52569640)
chr4 (105-211)||(7947108-7947214)
chr4 (102-220)||(25574986-25575104)
chr4 (138-220)||(28486083-28486165)
chr4 (102-171)||(27983404-27983473)
chr4 (102-211)||(31959816-31959925)
chr4 (133-226)||(33227365-33227458)
chr4 (102-211)||(37798022-37798131)
chr4 (138-207)||(48609772-48609841)
chr4 (145-225)||(31043229-31043309)
chr4 (105-225)||(33190853-33190973)
chr4 (102-210)||(47265197-47265305)
chr4 (102-225)||(12494820-12494943)
chr4 (102-225)||(21528445-21528568)
chr4 (102-225)||(23906299-23906422)
chr4 (102-225)||(32479195-32479318)
chr4 (102-209)||(34208271-34208378)
chr4 (102-225)||(39100538-39100661)
chr4 (102-225)||(45204842-45204964)
chr4 (102-225)||(48174095-48174218)
chr4 (102-225)||(53707951-53708074)
chr4 (102-220)||(55388213-55388331)
chr4 (138-207)||(5306471-5306540)
chr4 (147-204)||(20601699-20601756)
chr4 (102-155)||(25427864-25427917)
chr4 (102-210)||(19154865-19154973)
chr4 (136-204)||(20131025-20131093)
chr4 (102-170)||(38809601-38809669)
chr4 (147-207)||(40420261-40420321)
chr4 (102-214)||(48622545-48622657)
chr4 (137-225)||(56439608-56439696)
chr4 (102-185)||(13805267-13805350)
chr4 (102-225)||(28550457-28550580)
chr4 (103-226)||(31459150-31459273)
chr4 (135-225)||(4441010-4441100)
chr4 (143-225)||(30621244-30621326)
chr4 (137-183)||(54935348-54935394)
chr4 (137-174)||(3979128-3979165)
chr4 (102-155)||(4879111-4879164)
chr4 (102-211)||(43434095-43434204)
chr4 (102-154)||(1211394-1211446)
chr4 (102-174)||(7274276-7274347)
chr4 (146-225)||(33225881-33225958)
chr4 (102-174)||(45209207-45209279)
[»] scaffold0024 (1 HSPs)
scaffold0024 (102-225)||(82875-82998)
[»] chr8 (50 HSPs)
chr8 (102-220)||(12966314-12966434)
chr8 (102-215)||(490502-490615)
chr8 (102-212)||(44529395-44529505)
chr8 (102-211)||(29520820-29520929)
chr8 (143-215)||(30559860-30559932)
chr8 (135-219)||(43904700-43904784)
chr8 (102-185)||(35914603-35914686)
chr8 (102-225)||(36545306-36545429)
chr8 (102-225)||(42469729-42469852)
chr8 (102-187)||(3464173-3464258)
chr8 (138-215)||(21425213-21425290)
chr8 (102-215)||(42584526-42584638)
chr8 (104-225)||(45041320-45041440)
chr8 (105-213)||(28269685-28269792)
chr8 (102-225)||(11523725-11523848)
chr8 (102-169)||(41031422-41031489)
chr8 (102-169)||(41031528-41031595)
chr8 (146-211)||(25300270-25300335)
chr8 (102-225)||(36565243-36565366)
chr8 (102-225)||(42854006-42854129)
chr8 (102-189)||(45419428-45419515)
chr8 (102-172)||(1928589-1928659)
chr8 (103-225)||(12491141-12491263)
chr8 (106-176)||(18741838-18741908)
chr8 (106-176)||(18746802-18746872)
chr8 (104-174)||(32931168-32931238)
chr8 (102-225)||(14742084-14742204)
chr8 (146-211)||(25288935-25289000)
chr8 (102-174)||(27556304-27556376)
chr8 (138-210)||(31715992-31716064)
chr8 (102-225)||(37077908-37078029)
chr8 (165-225)||(39947014-39947074)
chr8 (103-215)||(41971793-41971905)
chr8 (102-213)||(2216456-2216566)
chr8 (102-185)||(2518400-2518483)
chr8 (102-185)||(4955388-4955471)
chr8 (102-225)||(21121303-21121425)
chr8 (102-225)||(25473405-25473528)
chr8 (102-173)||(36042407-36042478)
chr8 (102-225)||(40813481-40813604)
chr8 (102-209)||(44047534-44047641)
chr8 (102-152)||(12611727-12611777)
chr8 (157-226)||(12025933-12026002)
chr8 (135-172)||(24558693-24558730)
chr8 (137-210)||(36069774-36069847)
chr8 (102-214)||(15215414-15215526)
chr8 (147-191)||(29735998-29736042)
chr8 (102-174)||(32276893-32276965)
chr8 (102-174)||(32569712-32569784)
chr8 (102-170)||(39967501-39967569)
[»] chr3 (52 HSPs)
chr3 (102-215)||(54128546-54128659)
chr3 (102-225)||(49042093-49042217)
chr3 (102-226)||(53519736-53519860)
chr3 (102-225)||(45289093-45289216)
chr3 (102-225)||(15296064-15296187)
chr3 (102-225)||(35033303-35033426)
chr3 (102-225)||(48508392-48508515)
chr3 (102-225)||(52678852-52678975)
chr3 (102-202)||(40106622-40106722)
chr3 (102-225)||(52138957-52139080)
chr3 (102-200)||(39208790-39208888)
chr3 (108-225)||(54279177-54279294)
chr3 (102-226)||(12096707-12096831)
chr3 (105-225)||(19676086-19676206)
chr3 (102-226)||(36304122-36304246)
chr3 (101-225)||(39600682-39600806)
chr3 (102-225)||(5168989-5169112)
chr3 (103-174)||(32170613-32170684)
chr3 (102-209)||(38060887-38060994)
chr3 (102-225)||(53262298-53262421)
chr3 (138-220)||(29601054-29601136)
chr3 (102-211)||(28245608-28245717)
chr3 (135-204)||(48953454-48953523)
chr3 (102-211)||(52156086-52156195)
chr3 (138-226)||(19758043-19758131)
chr3 (102-214)||(26490483-26490595)
chr3 (104-188)||(52927852-52927936)
chr3 (102-225)||(22229-22352)
chr3 (102-201)||(14415262-14415360)
chr3 (102-185)||(40991628-40991711)
chr3 (102-221)||(48712077-48712196)
chr3 (110-212)||(40116348-40116450)
chr3 (102-184)||(45486851-45486933)
chr3 (102-207)||(2133614-2133719)
chr3 (102-167)||(35481143-35481208)
chr3 (104-225)||(50960641-50960762)
chr3 (102-174)||(7895882-7895954)
chr3 (138-226)||(19737140-19737228)
chr3 (105-225)||(23534576-23534695)
chr3 (161-209)||(38431021-38431069)
chr3 (138-214)||(49841784-49841860)
chr3 (102-213)||(311311-311422)
chr3 (102-225)||(25191534-25191657)
chr3 (102-225)||(49503570-49503693)
chr3 (102-225)||(51447719-51447842)
chr3 (159-225)||(39235295-39235361)
chr3 (135-225)||(42510051-42510141)
chr3 (135-185)||(54365010-54365060)
chr3 (102-191)||(38850312-38850401)
chr3 (150-211)||(54422893-54422954)
chr3 (102-174)||(30797824-30797896)
chr3 (102-174)||(46148236-46148308)
[»] chr6 (36 HSPs)
chr6 (102-225)||(9706927-9707050)
chr6 (102-225)||(21351839-21351962)
chr6 (102-215)||(5096001-5096114)
chr6 (102-225)||(34507-34630)
chr6 (102-225)||(6055774-6055896)
chr6 (103-211)||(30031427-30031535)
chr6 (102-225)||(608318-608441)
chr6 (102-225)||(12890732-12890855)
chr6 (102-225)||(32756078-32756201)
chr6 (102-225)||(35043443-35043566)
chr6 (102-174)||(1615225-1615297)
chr6 (102-214)||(3206461-3206573)
chr6 (102-225)||(9593712-9593833)
chr6 (102-174)||(30679604-30679676)
chr6 (102-201)||(12133904-12134003)
chr6 (146-225)||(24665968-24666047)
chr6 (147-220)||(26291939-26292012)
chr6 (102-211)||(34934832-34934941)
chr6 (102-170)||(33711154-33711222)
chr6 (102-225)||(28085533-28085656)
chr6 (102-225)||(34143767-34143890)
chr6 (102-225)||(34156383-34156506)
chr6 (102-164)||(2307843-2307905)
chr6 (143-225)||(5631979-5632061)
chr6 (135-225)||(31818688-31818778)
chr6 (102-214)||(5897625-5897737)
chr6 (137-209)||(9568872-9568944)
chr6 (101-173)||(30789075-30789147)
chr6 (143-210)||(5081012-5081079)
chr6 (140-211)||(33497130-33497201)
chr6 (146-225)||(34560417-34560496)
chr6 (160-221)||(7492550-7492611)
chr6 (169-226)||(28026896-28026953)
chr6 (102-174)||(586058-586130)
chr6 (105-173)||(4245877-4245945)
chr6 (143-215)||(14389204-14389276)
[»] chr5 (50 HSPs)
chr5 (102-225)||(28039-28162)
chr5 (106-209)||(5558314-5558417)
chr5 (101-225)||(14911329-14911453)
chr5 (102-225)||(3302001-3302124)
chr5 (102-189)||(18855800-18855887)
chr5 (135-215)||(418069-418149)
chr5 (102-225)||(1275421-1275544)
chr5 (102-225)||(4496541-4496664)
chr5 (135-225)||(9235204-9235294)
chr5 (107-225)||(38685124-38685242)
chr5 (106-215)||(14667938-14668047)
chr5 (102-226)||(26884691-26884816)
chr5 (102-225)||(13561388-13561511)
chr5 (102-225)||(20456930-20457053)
chr5 (102-225)||(28976861-28976984)
chr5 (102-225)||(29816539-29816662)
chr5 (105-212)||(32516725-32516831)
chr5 (102-225)||(34273170-34273293)
chr5 (137-207)||(20367068-20367138)
chr5 (132-220)||(17340468-17340556)
chr5 (102-214)||(43557835-43557947)
chr5 (102-225)||(2915498-2915620)
chr5 (102-225)||(10639459-10639582)
chr5 (102-225)||(12492386-12492509)
chr5 (102-225)||(24178667-24178790)
chr5 (102-225)||(36215645-36215768)
chr5 (102-208)||(36551320-36551426)
chr5 (104-210)||(38501422-38501528)
chr5 (146-211)||(42504293-42504358)
chr5 (102-225)||(14665871-14665992)
chr5 (102-225)||(16913884-16914008)
chr5 (102-214)||(31220551-31220662)
chr5 (150-226)||(36200885-36200961)
chr5 (102-174)||(38132544-38132616)
chr5 (146-225)||(14725675-14725754)
chr5 (135-210)||(35615455-35615530)
chr5 (102-225)||(43475396-43475519)
chr5 (102-220)||(2090575-2090693)
chr5 (102-172)||(29922494-29922564)
chr5 (135-201)||(32442160-32442226)
chr5 (107-185)||(41808119-41808197)
chr5 (102-167)||(7359263-7359328)
chr5 (102-215)||(7678645-7678757)
chr5 (102-158)||(4653476-4653532)
chr5 (125-225)||(6889150-6889250)
chr5 (102-166)||(9234102-9234166)
chr5 (138-174)||(11069200-11069236)
chr5 (102-225)||(11675686-11675810)
chr5 (135-215)||(30588614-30588694)
chr5 (102-174)||(42576218-42576290)
[»] chr1 (73 HSPs)
chr1 (102-220)||(43375600-43375718)
chr1 (102-210)||(41560401-41560509)
chr1 (102-225)||(25979233-25979356)
chr1 (102-189)||(28090696-28090783)
chr1 (102-215)||(5338880-5338993)
chr1 (102-211)||(15086093-15086202)
chr1 (102-215)||(52561591-52561704)
chr1 (102-214)||(10200308-10200420)
chr1 (102-226)||(19936616-19936740)
chr1 (102-206)||(25715328-25715432)
chr1 (102-225)||(4001457-4001580)
chr1 (102-225)||(4415506-4415629)
chr1 (102-225)||(34792351-34792474)
chr1 (102-225)||(37311757-37311880)
chr1 (102-225)||(38807673-38807796)
chr1 (135-225)||(39318286-39318376)
chr1 (102-211)||(4707223-4707331)
chr1 (102-211)||(37462878-37462986)
chr1 (137-225)||(52739547-52739636)
chr1 (102-225)||(29128940-29129064)
chr1 (102-225)||(1210902-1211025)
chr1 (145-220)||(12930356-12930431)
chr1 (102-225)||(22090253-22090376)
chr1 (123-210)||(27520230-27520317)
chr1 (102-225)||(30202132-30202255)
chr1 (102-225)||(32404529-32404651)
chr1 (102-225)||(49347395-49347518)
chr1 (102-225)||(52921237-52921360)
chr1 (103-225)||(39140672-39140794)
chr1 (103-225)||(52532619-52532741)
chr1 (143-220)||(16272864-16272941)
chr1 (102-167)||(37430422-37430487)
chr1 (102-174)||(28533675-28533747)
chr1 (160-220)||(52878359-52878419)
chr1 (102-225)||(3818858-3818981)
chr1 (102-185)||(8796406-8796489)
chr1 (111-214)||(11331215-11331318)
chr1 (111-214)||(11489236-11489339)
chr1 (102-173)||(21769713-21769784)
chr1 (109-212)||(27847809-27847912)
chr1 (102-189)||(44941778-44941865)
chr1 (139-214)||(52832213-52832288)
chr1 (105-207)||(6084150-6084252)
chr1 (143-188)||(1290074-1290119)
chr1 (113-174)||(26113452-26113513)
chr1 (102-207)||(34444531-34444636)
chr1 (102-211)||(51602227-51602336)
chr1 (102-225)||(696426-696550)
chr1 (102-174)||(1704835-1704907)
chr1 (102-186)||(22175341-22175425)
chr1 (102-210)||(24020269-24020377)
chr1 (150-214)||(41611974-41612037)
chr1 (102-174)||(44751692-44751764)
chr1 (102-185)||(2544790-2544873)
chr1 (102-225)||(4029279-4029402)
chr1 (102-225)||(8672075-8672198)
chr1 (138-225)||(9599432-9599519)
chr1 (102-201)||(39515870-39515969)
chr1 (102-185)||(50257767-50257850)
chr1 (143-226)||(52633215-52633298)
chr1 (143-225)||(16142023-16142105)
chr1 (135-185)||(27072522-27072572)
chr1 (137-215)||(48865744-48865822)
chr1 (137-214)||(8391940-8392017)
chr1 (102-174)||(5113951-5114023)
chr1 (102-174)||(9592942-9593014)
chr1 (102-174)||(10569073-10569145)
chr1 (143-187)||(19822083-19822127)
chr1 (193-225)||(26299242-26299274)
chr1 (102-174)||(29577460-29577532)
chr1 (135-226)||(32082791-32082883)
chr1 (102-174)||(42337764-42337836)
chr1 (135-215)||(50846729-50846809)
[»] scaffold0570 (1 HSPs)
scaffold0570 (102-225)||(950-1073)
[»] scaffold0041 (1 HSPs)
scaffold0041 (102-225)||(16735-16858)
[»] scaffold0692 (1 HSPs)
scaffold0692 (102-225)||(4793-4916)
[»] scaffold0157 (1 HSPs)
scaffold0157 (102-225)||(25534-25657)
[»] scaffold0018 (1 HSPs)
scaffold0018 (102-225)||(31625-31748)
[»] scaffold0491 (1 HSPs)
scaffold0491 (106-176)||(3643-3713)
[»] scaffold0245 (1 HSPs)
scaffold0245 (143-188)||(16479-16524)
[»] scaffold1318 (1 HSPs)
scaffold1318 (102-225)||(488-611)
[»] scaffold0045 (1 HSPs)
scaffold0045 (143-189)||(86652-86698)
[»] scaffold0025 (1 HSPs)
scaffold0025 (143-220)||(39481-39558)
[»] scaffold0199 (1 HSPs)
scaffold0199 (137-225)||(14740-14828)
[»] scaffold0168 (1 HSPs)
scaffold0168 (102-174)||(28891-28963)
[»] scaffold0050 (1 HSPs)
scaffold0050 (135-183)||(58261-58309)
[»] scaffold0036 (1 HSPs)
scaffold0036 (102-225)||(4282-4406)


Alignment Details
Target: chr2 (Bit Score: 170; Significance: 2e-91; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 44 - 225
Target Start/End: Complemental strand, 13149670 - 13149489
Alignment:
Q  44 aattaaactctctaccacttgtataaatacatttattattattggtccaataaacgtgaacaacaaccaagtcttatctcattaattgagatcggctata 143  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13149670 aattaaactctctaccacttgtataaatacatttattattattggtccaataaacgtgaacaacaaccaagtcttatctcattaattgagatcggctata 13149571  T
Q  144 tggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  13149570 tggatcaaattatgtcataatgttctatcatcaacgatatttggattctactcattaacctctaaatctttcataatagttt 13149489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 9496146 - 9496033
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||| || || ||| || | | ||||| ||||||||||||| | |||||||||||||||| || ||||||||||| | |||||||||    
T  9496146 aacaacaaccaagccttgtcccactaagtggggttggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcattaa 9496047  T
Q  202 cctctaaatctttc 215  Q
    ||||||||||||||    
T  9496046 cctctaaatctttc 9496033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 104 - 225
Target Start/End: Complemental strand, 41545683 - 41545562
Alignment:
Q  104 caacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacc 203  Q
    |||||| || || |||||||||||| |||||||||||| ||  ||||||||| |||||| ||||||||||| || |||||||| |||| ||||||  |||    
T  41545683 caacaatcatgtattatctcattaagtgagatcggctaaataaatcaaattaagtcatagtgttctatcataaaccatatttgaattcaactcatggacc 41545584  T
Q  204 tctaaatctttcataatggttt 225  Q
    |||| |||||| ||||||||||    
T  41545583 tctacatcttttataatggttt 41545562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 30743809 - 30743685
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||| ||| ||||||||| ||| |||| ||| ||  | ||||||||||||| |||| |||||||| || |||||||||||||||| ||||||| |    
T  30743809 aacaacaacaaagccttatctcactaagtgagttcgactgcaaggatcaaattatgacatattgttctattataaatcatatttggattcaactcattga 30743710  T
Q  202 cctctaaatctttcataatggtttt 226  Q
    |||||||||| ||  ||||||||||    
T  30743709 cctctaaatcatttctaatggtttt 30743685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 12882047 - 12882160
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| |||| | ||||| ||||||||||||| | || ||||||||||||  || ||||||||||| | |||||||||    
T  12882047 aacaacaaccaagccttatcccactaagtgaggtaggctacatggatcaaattacgccaaaatgttctatcacaaaccatatttggatccaactcattaa 12882146  T
Q  202 cctctaaatctttc 215  Q
    ||||||||| ||||    
T  12882147 cctctaaatatttc 12882160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 43573132 - 43573244
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||||| | ||||| |||| ||||| |||||||||||||| | |||||||||    
T  43573132 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataacgttcgatcataaatcatatttggatccaactcattaa 43573231  T
Q  202 cctctaaatctttc 215  Q
    ||| ||||||||||    
T  43573232 cct-taaatctttc 43573244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 103 - 215
Target Start/End: Original strand, 19336896 - 19337008
Alignment:
Q  103 acaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaac 202  Q
    ||||||||||||  ||||| || ||| || ||| ||||| ||||||||||||| | |||||||||||||||| || ||||||| ||| | |||||||||     
T  19336896 acaacaaccaagctttatcccaataagtgggattggctacatggatcaaattacgccataatgttctatcataaaccatatttcgatccaactcattaat 19336995  T
Q  203 ctctaaatctttc 215  Q
    |||||||||||||    
T  19336996 ctctaaatctttc 19337008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 31959801 - 31959678
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||||||  | ||| || | || |||| ||||||||||||||| |||| ||||||||||| || ||||||||||| | ||||||| |    
T  31959801 aacaacaaccaagccttatcctactaagtggggtctgctacatggatcaaattatgccatagtgttctatcataaaccatatttggatccaactcattga 31959702  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  31959701 cctctaaatcctttctaatggttt 31959678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 17429330 - 17429258
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||| ||||||||| ||| || | ||||||| ||| ||||||||||||||||||||||||||||    
T  17429330 aacaacaaccaagccttatctcactaagtggggtcggctacatgaatcaaattatgtcataatgttctatcat 17429258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 38430157 - 38430041
Alignment:
Q  109 accaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaa 208  Q
    |||||| ||||||||| ||| || | ||||||| ||||||||||| | | |||| ||||||||||  || ||||||||||| | ||||||| ||||||||    
T  38430157 accaagccttatctcactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaa 38430058  T
Q  209 atctttcataatggttt 225  Q
    ||||||  |||||||||    
T  38430057 atcttttctaatggttt 38430041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 3866352 - 3866229
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||||||  | ||| || | ||||||| ||||||||||| |||||||| |||||||||||  | || |||||||| | ||||||| |    
T  3866352 aacaacaaccaagccttatcctactaagtggggtcggctacatggatcaaatgatgtcatagtgttctatcatacaccaaatttggatccaactcattga 3866253  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  3866252 cctctaaatcctttctaatggttt 3866229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 12734980 - 12734857
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||| ||| |||||||||||||   |||| ||||||||||| || ||||||||||| | ||||||| |    
T  12734980 aacaacaaccaagccttatcccactaagtggggtcgactacatggatcaaattacaccatagtgttctatcataaaccatatttggatccaactcattga 12734881  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  12734880 cctctaaatcctttctaatggttt 12734857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 13150322 - 13150275
Alignment:
Q  3 ttaagtgtgagatgtttatagtccaaaagtctaaatctatgaattaaa 50  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13150322 ttaagtgtgagatgtttatcgtccaaaagtctaaatctatgaattaaa 13150275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 25834958 - 25834835
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | || | ||||||||||| || ||||||||||| | ||||||| |    
T  25834958 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccacagtgttctatcataaaccatatttggatccaactcattga 25834859  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  25834858 cctctaaatcctttctaatggttt 25834835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 28508958 - 28508835
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| ||||||||||| || || |||||||| | ||||||| |    
T  28508958 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcattga 28508859  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  28508858 cctctaaatcctttctaatggttt 28508835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 41197229 - 41197352
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| ||| || || | ||| ||| ||||||||||| | | |||||||||||||||  || |||||| |||| | |||| || |    
T  41197229 aacaacaaccaagccttatcccatcaagtggggtcgactacatggatcaaatgacgccataatgttctatcaaaaaccatattgggatccaactcgttga 41197328  T
Q  202 cctctaaatctttcataatggttt 225  Q
    ||||||||||||| ||||||||||    
T  41197329 cctctaaatcttttataatggttt 41197352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 45367627 - 45367736
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||| ||||| ||||| || ||| || | ||||| | ||||||||||| | |||||| ||||||||||  |||||||||||||| | ||||||| |    
T  45367627 aacaacaaacaagttttatcccactaagtggggtcggcgacatggatcaaatgacgtcatagtgttctatcaaaaatcatatttggatccaactcattta 45367726  T
Q  202 cctctaaatc 211  Q
    ||||||||||    
T  45367727 cctctaaatc 45367736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 2610868 - 2610745
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||||||||| ||| || | |||| || ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  2610868 aacaacaaccaagccttatctcactaagtggggtcggttacatggatcaaataacgccatagtgttctatcatacaccaaatttggatccaactcattga 2610769  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  2610768 cctctaaatcctttctaatggttt 2610745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 4682224 - 4682294
Alignment:
Q  146 gatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcat 217  Q
    ||||||| ||||||||||| || |||||| || ||||||||||| | |||||||||||||||||||||||||    
T  4682224 gatcaaagtatgtcataatattatatcat-aaccatatttggatccaactcattaacctctaaatctttcat 4682294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 35643228 - 35643105
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||| || |||| |||||||| |||||||||||  | || |||||||| | ||||||| |    
T  35643228 aacaacaaccaagccttatcccactaagtggggtcggctacatgtattaaatgatgtcatagtgttctatcatacaccaaatttggatccaactcattga 35643129  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  35643128 cctctaaatcctttctaatggttt 35643105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 38435232 - 38435109
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||  || ||| || ||||||||| ||||||||||||| | |||||||||| ||||| || || |||| ||| | || ||||||    
T  38435232 aacaacaaccaagccttatgccactaagtgggatcggctacatggatcaaattacgccataatgttcaatcataaaccaaatttcgatccaacacattaa 38435133  T
Q  202 cctctaaatctttcataatggttt 225  Q
     ||||| ||||||| |||| ||||    
T  38435132 tctctagatctttcttaatagttt 38435109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 188
Target Start/End: Original strand, 9531602 - 9531688
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttgga 188  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||||| | |||||||||| ||||| || ||||||||||    
T  9531602 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttccatcataaaccatatttgga 9531688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 224
Target Start/End: Complemental strand, 30306312 - 30306190
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| ||||||||||| || || |||||||| | ||||| | |    
T  30306312 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcaatga 30306213  T
Q  202 cctctaaatctttcataatggtt 224  Q
    |||||||||| ||  ||||||||    
T  30306212 cctctaaatcctttctaatggtt 30306190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 183
Target Start/End: Complemental strand, 34931713 - 34931631
Alignment:
Q  101 gaacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatat 183  Q
    |||||||||||||| ||| || || ||| |  | ||||||||||||||||||||||| |||||||||||||||| || |||||    
T  34931713 gaacaacaaccaagccttgtcccactaagtacggtcggctatatggatcaaattatgccataatgttctatcataaaccatat 34931631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 39029820 - 39029738
Alignment:
Q  143 atggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||||||||| | | |||||||||||||||  || ||||||||||| | ||||||| ||||||||||||||  |||||||||    
T  39029820 atggatcaaatgacgccataatgttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt 39029738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 45078008 - 45077883
Alignment:
Q  103 acaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattcta--ctcatta 200  Q
    ||||||||||||  |||||||| ||| || | |||| || ||||||||||||||| ||| |||||||||||| ||  |||||| ||| | |  |||||||    
T  45078008 acaacaaccaagctttatctcactaagtggggtcggttacatggatcaaattatgccattatgttctatcataaactatatttcgatccaactctcatta 45077909  T
Q  201 acctctaaatctttcataatggtttt 226  Q
    | ||||||||||||| |||| |||||    
T  45077908 atctctaaatctttcttaatagtttt 45077883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 227469 - 227360
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  227469 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 227370  T
Q  202 cctctaaatc 211  Q
    ||||||||||    
T  227369 cctctaaatc 227360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 11412990 - 11412864
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgtt---ctatcatcaatcatatttggattctactcat 198  Q
    ||||||||||||| ||||||  | ||| |||| ||||||| |||||||||||||   |||||||||   ||||||| || ||||||||||| | ||||||    
T  11412990 aacaacaaccaagccttatcctactaagtgagttcggctacatggatcaaattacaccataatgttctactatcataaaccatatttggatccaactcat 11412891  T
Q  199 taacctctaaatctttcataatggtttt 226  Q
    ||| |||| |||||||| |||| |||||    
T  11412890 taatctct-aatctttcctaatagtttt 11412864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 11992110 - 11992219
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||  || ||| || | || |||| ||||||||||| | | |||||||||||||||  ||||||||||||||   ||||||| |    
T  11992110 aacaacaaccaagccttattccactaagtggggtcagctacatggatcaaataacgccataatgttctatcaaaaatcatatttggatctaactcattga 11992209  T
Q  202 cctctaaatc 211  Q
    ||||||||||    
T  11992210 cctctaaatc 11992219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 18959191 - 18959078
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||| ||||||| |||||| || ||| || | || |||| ||||||||||||||| ||||||||||||||||  | ||||||| ||| | |||||||||    
T  18959191 aacaataaccaagccttatcccactaagtggggtcagctacatggatcaaattatgccataatgttctatcatagaccatattttgatccaactcattaa 18959092  T
Q  202 cctctaaatctttc 215  Q
     ||| || ||||||    
T  18959091 tctccaagtctttc 18959078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 10516751 - 10516831
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcata 182  Q
    ||||||||||||| |||||| || ||| ||||||| |||| ||||||||||||| | |||||| || |||||| |||||||    
T  10516751 aacaacaaccaagccttatcccactaagtgagatcagctacatggatcaaattacgccataatattttatcataaatcata 10516831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 221
Target Start/End: Original strand, 1400503 - 1400578
Alignment:
Q  146 gatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatg 221  Q
    |||||||||| | |||||| || |||| | |||||||||| ||||| |||||||||| |||||||||||| |||||    
T  1400503 gatcaaattacgccataatattttatcgtaaatcatatttagattcaactcattaacttctaaatctttcctaatg 1400578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 7326162 - 7326285
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | | ||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  7326162 aacaacaaccaagccttatcccactaagtggggttggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 7326261  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  7326262 cctctaaatcatttctaatggttt 7326285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 33287701 - 33287578
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||||||| || || ||| ||   | ||||| | |||||||| ||||||||||||||||||||| || ||||||| |||   |||||||||    
T  33287701 aacaacaaccaagtcttgtcccactaagtggagttggctacaaggatcaaactatgtcataatgttctatcataaaccatatttcgatctaactcattaa 33287602  T
Q  202 cctctaaatctttcataatggttt 225  Q
      |||| ||||||| |||| ||||    
T  33287601 tttctagatctttcttaatagttt 33287578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 225
Target Start/End: Original strand, 35755246 - 35755374
Alignment:
Q  101 gaacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctac----tc 196  Q
    |||||||||||||| |||||| || ||| |  | ||||||  ||||||||||||| | || ||||||||||||| || ||||||||||| | ||    |     
T  35755246 gaacaacaaccaagccttatcccactaagtagggtcggctgcatggatcaaattacggcacaatgttctatcataaaccatatttggatccaacccatta 35755345  T
Q  197 attaacctctaaatctttcataatggttt 225  Q
    ||||||||||||||||||| |||| ||||    
T  35755346 attaacctctaaatctttcctaatagttt 35755374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 9996661 - 9996751
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||||| ||||||||||||||| |||| ||||  ||||| || ||||||||||| | |||| || ||||||||||| ||  |||||||||    
T  9996661 tcggctacatggatcaaattatgccatagtgtttaatcataaaccatatttggatccaactcgttgacctctaaatcctttctaatggttt 9996751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 26671015 - 26670925
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||||| |||||||||||||   ||| || ||||||||| |||||||||| | | | ||||||||| ||||||||||||| |||| ||||    
T  26671015 tcggctacatggatcaaattacaccattatattctatcataaatcatattttggtccaactcattaatctctaaatctttcttaatagttt 26670925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 33504502 - 33504432
Alignment:
Q  104 caacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||| |||||| || ||| || | ||||||| ||||||||||||| | ||||||||||||||||    
T  33504502 caacaaccaagccttatcccactaagtggggtcggctagatggatcaaattacgccataatgttctatcat 33504432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 3635325 - 3635422
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcatt 199  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| ||||||||||  || ||||||||||| | |||||||    
T  3635325 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 3635422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 174
Target Start/End: Complemental strand, 9864157 - 9864116
Alignment:
Q  133 gatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||| ||||| ||||||||||||||||||||||||||    
T  9864157 gatcggctaaatggaccaaattatgtcataatgttctatcat 9864116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 6219210 - 6219126
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatg 221  Q
    ||||| |||||||||||||   |||||||||||||||| || ||||||| | | | ||||| ||| ||||||||||||| |||||    
T  6219210 ggctacatggatcaaattacaccataatgttctatcataaaccatatttcggtccaactcactaatctctaaatctttcctaatg 6219126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 12141789 - 12141701
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||| || |||||||| ||| ||||||||||||||||  | ||||||||||| | | ||||||| |||||| |||||| |||| ||||    
T  12141789 ggctacatcgatcaaatcatgccataatgttctatcatataccatatttggatccaagtcattaatctctaagtctttcctaatagttt 12141701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 23997882 - 23997758
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||| || |||||||||||| | ||| || | |||| || ||| ||||||| | | |||| |||| |||||  || ||||||||||| | ||||||| |    
T  23997882 aacaataatcaagtcttatctgaataagtggggtcggatacatgaatcaaataacgccatagtgttttatcaaaaaccatatttggatccaactcattga 23997783  T
Q  202 cctctaaatctttcataatggtttt 226  Q
    |||||||||||||  ||||||||||    
T  23997782 cctctaaatcttttctaatggtttt 23997758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 45543075 - 45543186
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||| ||||  ||||| || ||| || | ||||||| || ||||||| || | |||||||||||||||| || |||||||||||   ||||||| |    
T  45543075 aacaacaagcaagcattatcccactaagtggggtcggctacatagatcaaagtacgccataatgttctatcataaaccatatttggatcgaactcatt-a 45543173  T
Q  202 cctctaaatcttt 214  Q
    |||||||||||||    
T  45543174 cctctaaatcttt 45543186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 3243655 - 3243778
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | |||||||  |||||||||| | | |||| |||||||||||  | || | |||||| | ||||||| |    
T  3243655 aacaacaaccaagccttatcccactaagtggggtcggctacctggatcaaatgacgccatagtgttctatcatacaccaaacttggatccaactcattga 3243754  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  3243755 cctctaaatcctttctaatggttt 3243778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 226
Target Start/End: Complemental strand, 11744758 - 11744679
Alignment:
Q  147 atcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggtttt 226  Q
    |||||||||  ||||||||||| ||||| ||| ||| ||| |||| | |||||||||| ||||| ||||||||| |||||    
T  11744758 atcaaattacatcataatgttcgatcataaattataattgaattcaattcattaacctttaaatttttcataatagtttt 11744679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 18424380 - 18424502
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||||||||| || ||| || |  ||| || ||||||||||| | |||||| ||||||||||| || |||||| ||||   ||| ||| |    
T  18424380 aacaacaaccaagtcttatcccactaagtggggacgg-tacatggatcaaatgacgtcatagtgttctatcataaaccatattcggatcaaacttattga 18424478  T
Q  202 cctctaaatctttcataatggttt 225  Q
     ||||||||| || ||||||||||    
T  18424479 tctctaaatcctttataatggttt 18424502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 225
Target Start/End: Original strand, 26784350 - 26784465
Alignment:
Q  110 ccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaa 209  Q
    ||||||||||||  | ||| |||||| ||||| |||||||||||||   || |||||| ||||||  | |||||||  |||| ||||||||| ||||| |    
T  26784350 ccaagtcttatcctactaagtgagattggctacatggatcaaattaaaccaaaatgttttatcatataccatatttctattcaactcattaatctctata 26784449  T
Q  210 tctttcataatggttt 225  Q
    |||||| |||| ||||    
T  26784450 tctttcttaatagttt 26784465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 12520064 - 12520146
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatt 184  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||||| | |||| |||| |||||| || ||||||    
T  12520064 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttttatcataaaccatatt 12520146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 17581687 - 17581621
Alignment:
Q  154 tatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataat 220  Q
    ||||||||| ||||||||||| |||||||||| ||||| |||||| ||  | |||||||||| ||||    
T  17581687 tatgtcatattgttctatcataaatcatatttagattcaactcataaatatgtaaatctttcgtaat 17581621  T

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Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 19863514 - 19863432
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatt 184  Q
    |||||||||||||  ||||| || ||| || |  |||||| ||||||||||| ||| |||||||||||||||| || ||||||    
T  19863514 aacaacaaccaagctttatcccactaagtggggacggctacatggatcaaatcatgccataatgttctatcataaaccatatt 19863432  T

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Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 19867846 - 19867764
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatt 184  Q
    |||||||||||||  ||||| || ||| || |  |||||| ||||||||||| ||| |||||||||||||||| || ||||||    
T  19867846 aacaacaaccaagctttatcccactaagtggggacggctacatggatcaaatcatgccataatgttctatcataaaccatatt 19867764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 184
Target Start/End: Complemental strand, 19872747 - 19872665
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatt 184  Q
    |||||||||||||  ||||| || ||| || |  |||||| ||||||||||| ||| |||||||||||||||| || ||||||    
T  19872747 aacaacaaccaagctttatcccactaagtggggacggctacatggatcaaatcatgccataatgttctatcataaaccatatt 19872665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 31254511 - 31254445
Alignment:
Q  159 cataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||||||||| |||| ||||||||||  |||| ||||||||| ||||| ||||||| |||| ||||    
T  31254511 cataatgttctgtcataaatcatatttctattcaactcattaatctctagatctttcttaatagttt 31254445  T

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Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 38328372 - 38328479
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| ||  ||||| |    
T  38328372 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgaagccatagtgttctatcatgcaccaaatttggatcct--tcattga 38328469  T
Q  202 cctctaaatc 211  Q
    ||||||||||    
T  38328470 cctctaaatc 38328479  T

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Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 335750 - 335786
Alignment:
Q  138 gctatatggatcaaattatgtcataatgttctatcat 174  Q
    |||||||||||||||||||| | ||||||||||||||    
T  335750 gctatatggatcaaattatgccgtaatgttctatcat 335786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 4807875 - 4807767
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| ||||||||| |  | |  |||||||| | ||||||| |    
T  4807875 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcgtacaccgaatttggatccaactcattga 4807776  T
Q  202 cctctaaat 210  Q
    |||||||||    
T  4807775 cctctaaat 4807767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 9647613 - 9647685
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||| ||||||||||||| || |||||| |  ||| ||||||  ||| |||||||||| |||||    
T  9647613 aacaacaaccaagccttatctcattaaatgggatcggttgcatgaatcaaacgatgccataatgttccatcat 9647685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 12474929 - 12475001
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||    
T  12474929 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcat 12475001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 4e-28; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 24598190 - 24598312
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||||||||| |||||| |||| ||||||| ||||||||||| ||| || ||| ||||||||  |||||||||||||||| ||||||| |    
T  24598190 aacaacaaccaagtcttatcccattaaatgag-tcggctacatggatcaaatgatgccaaaatattctatcaaaaatcatatttggattcaactcattga 24598288  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  24598289 cctctaaatcttttctaatggttt 24598312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 140 - 225
Target Start/End: Complemental strand, 35922495 - 35922410
Alignment:
Q  140 tatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    |||||||||||||||| |||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||| |||| ||||    
T  35922495 tatatggatcaaattaggtcataatgttctatcataaatcatatttagattcaactcattaacctctaaatctttcttaatagttt 35922410  T

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Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 40979930 - 40980042
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||||| | |||| ||||||||||| || ||||||||||| | ||||||| |    
T  40979930 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactcattga 40980029  T
Q  202 cctctaaatcttt 214  Q
    |||||||||||||    
T  40980030 cctctaaatcttt 40980042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 36101779 - 36101897
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||  ||| ||||||||||||| |||||||||||||||||| || ||||||| ||| | |||||||||    
T  36101779 aacaacaaccaagccttatcccactaagtggggtcaactacatggatcaaattacgtcataatgttctatcataaaccatattttgatccaactcattaa 36101878  T
Q  202 cctctaaatctttcataat 220  Q
     || |||||||||||||||    
T  36101879 tctataaatctttcataat 36101897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 225
Target Start/End: Complemental strand, 45601755 - 45601633
Alignment:
Q  103 acaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaac 202  Q
    |||||||||||| |||||| || ||| |||| || |||| |||||||||||||   |||| ||||||||||| |||||||||| ||| | |||||||||     
T  45601755 acaacaaccaagccttatcccactaagtgagttcagctacatggatcaaattacaccatagtgttctatcataaatcatattttgatccaactcattaat 45601656  T
Q  203 ctctaaatctttcataatggttt 225  Q
    ||||| ||||||| |||||||||    
T  45601655 ctctagatctttcttaatggttt 45601633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 21078197 - 21078074
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| |||  ||||||| ||||||||||| | | ||||||||||||||||  | || |||||||| | ||||||| |    
T  21078197 aacaacaaccaagccttatcccactaaatgaagtcggctacatggatcaaatgacgccataatgttctatcatacaccaaatttggatccaactcattga 21078098  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  21078097 cctctaaatctttactaatggttt 21078074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 27649060 - 27648937
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||||| | || | ||||||||||| || || |||||||| | ||||||| |    
T  27649060 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccacagtgttctatcataaaccaaatttggatccaactcattga 27648961  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  27648960 cctctaaatcttttctaatggttt 27648937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 9210706 - 9210819
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||| ||| |||||| || ||| || | || |||| ||||||||||||| | ||||||||| |||||| || ||||||||||| | |||||||||    
T  9210706 aacaacaacgaagccttatcccactaagtggggtcagctacatggatcaaattacgccataatgttgtatcataaaccatatttggatccaactcattaa 9210805  T
Q  202 cctctaaatctttc 215  Q
    ||||||||| ||||    
T  9210806 cctctaaatttttc 9210819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 27893565 - 27893689
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| |  | ||||||| ||| ||||||||||| |||||||||||||||| || ||||||| | | |  ||||||||    
T  27893565 aacaacaaccaagccttatcgcactaagtagggtcggctacatgaatcaaattatgccataatgttctatcataaaacatatttcggtccagctcattaa 27893664  T
Q  202 cctctaaatctttcataatggtttt 226  Q
     ||||||||||||| |||| |||||    
T  27893665 tctctaaatctttcttaatagtttt 27893689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 43491588 - 43491480
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| |||||| ||||||  ||||| ||||||||||| |||||||||||||| | ||| ||| |    
T  43491588 aacaacaaccaagccttatcccactaagtggggtcggctacatggatgaaattacatcatagtgttctatcataaatcatatttggatccaacttattga 43491489  T
Q  202 cctctaaat 210  Q
    |||||||||    
T  43491488 cctctaaat 43491480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 12841277 - 12841400
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| ||||||||||| || || |||||||| | ||||||| |    
T  12841277 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatacaactcattga 12841376  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  12841377 cctctaaatcctttctaatggttt 12841400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 43281954 - 43281831
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||| || || ||| || | ||||||| ||||||||||| | | |||| ||||||||||  || ||||||||||| | ||||||| |    
T  43281954 aacaacaaccaagccttgtcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattga 43281855  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  43281854 cctctaaatcttttctaatggttt 43281831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 45836484 - 45836607
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||| || |||||| || ||| || | ||||||| ||||||||||| | | |||| ||||||||||| || ||||||||||| | ||||||| |    
T  45836484 aacaacaaccgagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcattga 45836583  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  45836584 cctctaaatcctttctaatggttt 45836607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 46355858 - 46355981
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||||||||| ||| || | ||||||| ||||||||||| ||| |||| |||||||||||  | || |||||||| | ||||||| |    
T  46355858 aacaacaaccaagccttatctcactaagtggggtcggctacatggatcaaatgatggcatagtgttctatcatacaccagatttggatccaactcattga 46355957  T
Q  202 cctctaaatctttcataatggttt 225  Q
    ||| |||||| ||  |||||||||    
T  46355958 cctttaaatcctttctaatggttt 46355981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 28627968 - 28628058
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||||| ||||||||||||| | |||||||||||||||| || || ||||| || | ||||||||| ||||||||||||| |||| ||||    
T  28627968 tcggctacatggatcaaattacgccataatgttctatcataaaccacatttgcatccaactcattaatctctaaatctttcctaatagttt 28628058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 218
Target Start/End: Complemental strand, 37976480 - 37976399
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcata 218  Q
    ||||| ||||||| ||||  | |||||||||||||||| || ||||||||||| | ||||||||| ||||||||||||||||    
T  37976480 ggctacatggatctaatttagccataatgttctatcataaaccatatttggatccaactcattaatctctaaatctttcata 37976399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 32631844 - 32631720
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| || |||||||| | | ||||  |||||||||  || ||||||||||| | ||||||| |    
T  32631844 aacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaatgacgccatagcgttctatcaaaaaccatatttggatccaactcattga 32631745  T
Q  202 cctctaaatctttcataatggtttt 226  Q
    |||||||||||||  ||||||||||    
T  32631744 cctctaaatcttttctaatggtttt 32631720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 36239833 - 36239921
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||| ||||||||||||| | |||||||||||||||| || ||||||||||| | |||| |||| |||||||| |||| |||| ||||    
T  36239833 ggctacatggatcaaattacgccataatgttctatcataaagcatatttggatccaactcgttaatctctaaatttttcctaatagttt 36239921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 40008433 - 40008505
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||||||||||||||||| |||| || |||| ||||||||||  | | ||||||||||||||||    
T  40008433 aacaacaaccaagtcttatctcattaagtgaggtcagctacatggatcaaacaacgacataatgttctatcat 40008505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 47185810 - 47185881
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||||||||||||||||| || | ||||||| || |||||||  ||||||||||||||||||||    
T  47185810 aacaacaaccaagtcttatctcattaagtggggtcggcta-atagatcaaacaatgtcataatgttctatcat 47185881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 2885724 - 2885847
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| |||||||||||||   |||| ||||||||||| || ||||||||| | | ||||||| |    
T  2885724 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacaccatagtgttctatcataaaccatatttgggtccaactcattga 2885823  T
Q  202 cctctaaatctttcataatggttt 225  Q
    || ||||||| ||  |||||||||    
T  2885824 ccactaaatcatttctaatggttt 2885847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 11594240 - 11594117
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  11594240 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 11594141  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  11594140 cctctaaatcctttctaatggttt 11594117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 29650664 - 29650541
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | | || ||||||||||  || |||||||||||   ||||||| |    
T  29650664 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccttagtgttctatcaaaaaccatatttggatcaaactcattga 29650565  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  29650564 cctctaaatcttttctaatggttt 29650541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 34869700 - 34869577
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || |||||  | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  34869700 aacaacaaccaagccttatcccactaattagggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 34869601  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  34869600 cctctaaatcctttctaatggttt 34869577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 35558995 - 35559118
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||| ||| ||||||| | ||| |||| || |||| ||||||||||| |||  ||||||||||| ||| ||  | |||||||| | ||||||| |    
T  35558995 aacaacaactaagccttatcttactaaatgaggtccgctacatggatcaaatgatgctataatgttctaccataaactaaatttggatccaactcattga 35559094  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  35559095 cctctaaatcttttctaatggttt 35559118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 42969945 - 42969870
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaat 210  Q
    ||||||| ||||||||||||||   ||||||||| ||||| || ||||||||||| | ||||||||||||||||||    
T  42969945 tcggctacatggatcaaattatacgataatgttcaatcataaaccatatttggatccaactcattaacctctaaat 42969870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 15682454 - 15682345
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||| ||||||  |||||||| ||| || | | ||||| |||||||||| || | |||| ||||||||||| |||||||||||||| | ||| ||| |    
T  15682454 aacaactaccaagctttatctcactaagtggggttggctacatggatcaaagtacgccatagtgttctatcataaatcatatttggatccaacttattga 15682355  T
Q  202 cctctaaatc 211  Q
    ||||||||||    
T  15682354 cctctaaatc 15682345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 25731476 - 25731589
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||||||||| ||||||  ||| || |||| || |||||||||| | |||||||||||||    || ||||||||||| | | | |||||    
T  25731476 aacaacaaccaagtcttatcccattaaacgaggtctgctacattgatcaaattacgccataatgttctattcgaaaccatatttggatccaatttattaa 25731575  T
Q  202 cctctaaatctttc 215  Q
    ||| ||||||||||    
T  25731576 cctgtaaatctttc 25731589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 44401164 - 44401250
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||| ||||||||||||| |||||||||||||||||| || ||||||| |||   |||| |||| ||||||||||||| |||| ||||    
T  44401164 ggctacatggatcaaattacgtcataatgttctatcataaaacatattttgat--aactcgttaatctctaaatctttcttaatagttt 44401250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 216
Target Start/End: Complemental strand, 6072329 - 6072218
Alignment:
Q  104 caacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacc 203  Q
    |||||||||||||||| |||| ||| || | || |||| ||| |||||| || |||||||| |||| |||| |||||||||| ||||| ||| ||||| |    
T  6072329 caacaaccaagtctta-ctcactaagtgtggtcagctacatgtatcaaactacgtcataatattctgtcataaatcatatttcgattcaactaattaaac 6072231  T
Q  204 tctaaatctttca 216  Q
    |||| ||||||||    
T  6072230 tctagatctttca 6072218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 14057723 - 14057635
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||| |||||||||||||   |||||||||||||||| || |||||||| ||   || |||||||||||||||||||| |||| ||||    
T  14057723 ggctacatggatcaaattaccccataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagttt 14057635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 14367751 - 14367663
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||| |||||||||||||   |||||||||||||||| || |||||||| ||   || |||||||||||||||||||| |||| ||||    
T  14367751 ggctacatggatcaaattaccccataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagttt 14367663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 210
Target Start/End: Original strand, 21517426 - 21517490
Alignment:
Q  146 gatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaat 210  Q
    |||||||||| ||||||||||| |||||| |||||||||||||| | ||| ||||| ||||||||    
T  21517426 gatcaaattacgtcataatgttatatcataaatcatatttggatccaacttattaatctctaaat 21517490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 34035156 - 34035264
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| || ||| || ||| || | ||||||| ||||||||||| | | |||| ||||||||||| || ||||||||||| | ||||||| |    
T  34035156 aacaacaaccaagcctaatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatgaaccatatttggatccaactcattga 34035255  T
Q  202 cctctaaat 210  Q
     ||||||||    
T  34035256 tctctaaat 34035264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 44425210 - 44425270
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcata 162  Q
    |||||||| |||||||||||||||||| || | |||| || ||||||||||||||||||||    
T  44425210 aacaacaaacaagtcttatctcattaaatggggtcggttacatggatcaaattatgtcata 44425270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 44855176 - 44855297
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||| ||||||| | |||| ||||  ||||| || || |||||||| | ||||||| |    
T  44855176 aacaacaaccaagccttatcccactaagtggggtcggctacatggaccaaattacgccatagtgtt--atcataaaccaaatttggatccaactcattga 44855273  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  44855274 cctctaaatcttttctaatggttt 44855297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 48919392 - 48919268
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| |||||| || | ||| ||| ||||||||||| | | |||| || | |||||| || |||||||||||   ||||||| |    
T  48919392 aacaacaaccaagccttatcccattaagtggggtcgactacatggatcaaatgacgccatagtggtttatcataaaccatatttggatcaaactcattga 48919293  T
Q  202 cctctaaatctttcataatggtttt 226  Q
    |||||||||| ||  ||||||||||    
T  48919292 cctctaaatcatttctaatggtttt 48919268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 7273380 - 7273257
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||| |||| |||||| || ||| || | ||||||| ||||||||||||| |||||| || | |||||| || |||||||| || | ||||||| |    
T  7273380 aacaacaatcaagccttatcccactaagtggggtcggctacatggatcaaattacgtcatagtgctatatcataaaccatatttgaatccaactcattga 7273281  T
Q  202 cctctaaatctttcataatggttt 225  Q
    ||||| ||| |||  |||||||||    
T  7273280 cctctgaatattttctaatggttt 7273257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 28208330 - 28208417
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggat 189  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| ||||||||||| || |||||||||||    
T  28208330 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggat 28208417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 31681022 - 31681145
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||| || || ||| || | ||||||| ||||||||||||| |||||| | ||||||||| |  ||||||||||| | ||||||| |    
T  31681022 aacaacaaccaagccttttcccactaagtggggtcggctacatggatcaaattacgtcatagtattctatcataagccatatttggatccaactcattga 31681121  T
Q  202 cctctaaatctttcataatggttt 225  Q
    ||  |||||| ||  |||||||||    
T  31681122 cccttaaatcctttctaatggttt 31681145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 31682604 - 31682727
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| ||||||||||| || || || ||||| | | ||||| |    
T  31682604 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatatggatccaattcattga 31682703  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  31682704 cctctaaatcctttctaatggttt 31682727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 33349808 - 33349931
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| |||||| |||| ||||||| ||||||||||| | |  ||| |||||||  ||  | || |||||||| | ||||||| |    
T  33349808 aacaacaaccaagccttatcccattaagtgaggtcggctacatggatcaaatgacgctatagtgttctactatacaccaaatttggatccaactcattga 33349907  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  33349908 cctctaaatcatttctaatggttt 33349931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 39906374 - 39906497
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | | ||||| |    
T  39906374 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaagtcattga 39906473  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  39906474 cctctaaatcctttctaatggttt 39906497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 33732112 - 33732001
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || || |||||| |||||||||||  || |||||||||||||||| || ||||||| |||   |||||||||    
T  33732112 aacaacaaccaagccttatcccactaagtgggaccggctacatggatcaaat--tgccataatgttctatcataaaccatatttcgatctcactcattaa 33732015  T
Q  202 cctctaaatctttc 215  Q
     || || |||||||    
T  33732014 tctttagatctttc 33732001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 8492282 - 8492351
Alignment:
Q  146 gatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttc 215  Q
    |||||||||||| |||| | ||||||||| || ||||| ||||| | |||| ||||||||||||||||||    
T  8492282 gatcaaattatgccatagttttctatcataaaccatatatggatccaactcgttaacctctaaatctttc 8492351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 215
Target Start/End: Original strand, 8519092 - 8519161
Alignment:
Q  146 gatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttc 215  Q
    |||||||||||| |||| | ||||||||| || ||||| ||||| | |||| ||||||||||||||||||    
T  8519092 gatcaaattatgccatagttttctatcataaaccatatatggatccaactcgttaacctctaaatctttc 8519161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 36137044 - 36136931
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || |||  | |||||| || ||  |||||||||    ||||||||||||||| || ||||||||||| | | |||||||    
T  36137044 aacaacaaccaagccttatcccactaagcgcgatcggttaaataaatcaaattaccctataatgttctatcataaaccatatttggatccaattcattaa 36136945  T
Q  202 cctctaaatctttc 215  Q
    | ||||||||||||    
T  36136944 catctaaatctttc 36136931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 220
Target Start/End: Complemental strand, 40415254 - 40415169
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataat 220  Q
    ||||||| ||||||||||||| |  |||  |||| ||||| || |||||||||||   ||||||||||||||||||||||| ||||    
T  40415254 tcggctacatggatcaaattaagctatagggttcaatcataaaacatatttggatcaaactcattaacctctaaatctttcctaat 40415169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 38607272 - 38607148
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||| | || ||| ||   ||||||| ||||||||||  | | |||| ||||||||||  || ||||||||||| | ||||||| |    
T  38607272 aacaacaaccaagccttaacccactaagtggagtcggctacatggatcaaacgacgccatagtgttctatcaaaaaccatatttggatccaactcattga 38607173  T
Q  202 cctctaaatctttcataatggtttt 226  Q
    |||||||||| ||  ||||||||||    
T  38607172 cctctaaatcctttctaatggtttt 38607148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 42187721 - 42187598
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcat-aatgttctatcatcaatcatatttggattctactcatta 200  Q
    ||||||||| ||| |||||| || ||| || | ||||||| ||||||||||||| | ||| ||||||||||||| || || |||||||| | ||| ||||    
T  42187721 aacaacaacaaagccttatcccactaagtggggtcggctacatggatcaaattacgccataaatgttctatcataaacca-atttggatccaactaatta 42187623  T
Q  201 acctctaaatctttcataatggttt 225  Q
    | |||||||| |||| |||| ||||    
T  42187622 atctctaaatatttcctaatagttt 42187598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 48515555 - 48515475
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcata 182  Q
    ||||| |||||||||||||| || ||| || | ||||||| | ||||||||||| |||||| ||| ||||||| |||||||    
T  48515555 aacaaaaaccaagtcttatcccactaagtggggtcggctacacggatcaaattacgtcatagtgtactatcataaatcata 48515475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 2882738 - 2882837
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||| |||||| ||| ||||| ||| |||| || |||| || |||||||||| | |||||||||||||||| || ||| ||| ||| | |||||||||    
T  2882738 aacaaccaccaagccttttctcactaagtgaggtcagctaaatagatcaaattacgccataatgttctatcataaaccatgtttcgatccaactcattaa 2882837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 28541979 - 28542070
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggtttt 226  Q
    ||||||| | |||||||| |||| ||| |||||||||||| || |||| ||  || | ||||||||| ||||||||||||| |||| |||||    
T  28541979 tcggctacacggatcaaactatgccatgatgttctatcataaaccatagttcaatccaactcattaatctctaaatctttcttaatagtttt 28542070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 36652272 - 36652149
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||| ||||| || |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||||| ||||||| |    
T  36652272 aacagcaaccgagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggattcaactcattga 36652173  T
Q  202 cctctaaatctttcataatggttt 225  Q
    ||||| |||| ||  |||||||||    
T  36652172 cctctgaatcctttctaatggttt 36652149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 37618225 - 37618102
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| |   |||| |||||||||||  | || |||||||| | ||| ||| |    
T  37618225 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgttctatcatacaccaaatttggatccaacttattga 37618126  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  37618125 cctctaaatcctttctaatggttt 37618102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 38900236 - 38900114
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| ||||| |||||  | || |||||||| | ||||||| |    
T  38900236 aacaacaaccaagccttatcccactaagtggg-tcggctacatggatcaaatgacgccatagtgttcaatcatacaccaaatttggatccaactcattga 38900138  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  38900137 cctctaaatcctttctaatggttt 38900114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 186
Target Start/End: Complemental strand, 44951402 - 44951351
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttg 186  Q
    ||||||| ||||||||||||| |||||| ||||||||||| ||| |||||||    
T  44951402 tcggctacatggatcaaattacgtcatagtgttctatcataaataatatttg 44951351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 1011326 - 1011209
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| || ||||||||||   |||||||||||||| | || |||| |||||| | | |||||||    
T  1011326 aacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaattacaccataatgttctatcctaaaccata-ttggatccaaatcattaa 1011228  T
Q  202 cctctaaatctttcataat 220  Q
    ||| ||||| |||| ||||    
T  1011227 cctttaaatatttcctaat 1011209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 220
Target Start/End: Complemental strand, 1569252 - 1569178
Alignment:
Q  146 gatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataat 220  Q
    |||||||||| | | |||||||||||||| || ||||||| ||| | ||||||||| ||||| ||||||| ||||    
T  1569252 gatcaaattacgccgtaatgttctatcataaaccatattttgatccaactcattaatctctagatctttcttaat 1569178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 6263539 - 6263477
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataat 164  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||||||| ||||||    
T  6263539 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattatgccataat 6263477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 214
Target Start/End: Complemental strand, 18795893 - 18795855
Alignment:
Q  176 aatcatatttggattctactcattaacctctaaatcttt 214  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  18795893 aatcatatttgaattcaactcattaacctctaaatcttt 18795855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 26332908 - 26332958
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatattt 185  Q
    ||||||| ||||||||||||| |||||||| ||||||||| || |||||||    
T  26332908 tcggctacatggatcaaattacgtcataatattctatcataaaccatattt 26332958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 185
Target Start/End: Original strand, 26763213 - 26763259
Alignment:
Q  139 ctatatggatcaaattatgtcataatgttctatcatcaatcatattt 185  Q
    |||||||||||||||||||||  || |||||||||| ||||||||||    
T  26763213 ctatatggatcaaattatgtccgaacgttctatcataaatcatattt 26763259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 30814160 - 30814210
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatattt 185  Q
    ||||||| ||||||||||||| || ||||||||||||||| || |||||||    
T  30814160 tcggctacatggatcaaattacgtgataatgttctatcataaaacatattt 30814210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 211
Target Start/End: Complemental strand, 31859140 - 31859046
Alignment:
Q  117 ttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatc 211  Q
    |||||||||||| | ||  ||| || ||| |||||||||||||||| |||||||| || ||| | |||||||| | ||||||| || ||||||||    
T  31859140 ttatctcattaactaaggccggttacatgaatcaaattatgtcatagtgttctattataaattaaatttggatccaactcattgacttctaaatc 31859046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 225
Target Start/End: Original strand, 35906208 - 35906326
Alignment:
Q  107 caaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctct 206  Q
    |||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |||||     
T  35906208 caaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctcg 35906307  T
Q  207 aaatctttcataatggttt 225  Q
    ||||| ||  |||||||||    
T  35906308 aaatcctttctaatggttt 35906326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 9796364 - 9796299
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgtt 167  Q
    ||||||||| || ||||||| |||||| |||| ||||||| ||| ||| ||||| |||||||||||    
T  9796364 aacaacaactaaatcttatcccattaagtgaggtcggctacatgaatcgaattacgtcataatgtt 9796299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 28355403 - 28355322
Alignment:
Q  144 tggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    |||||||||||  | ||||||||| |||||| || ||||||| ||| |  ||||||||||| |||||||||| |||| ||||    
T  28355403 tggatcaaattccgccataatgttttatcataaaccatattttgatccacctcattaacctataaatctttcctaatagttt 28355322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 206
Target Start/End: Complemental strand, 33073206 - 33073105
Alignment:
Q  105 aacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacct 204  Q
    |||||||||| |||||| || ||| || ||||||||| ||||||||||| | |||||| |||| ||| ||  | || |||||||| | ||||||| ||||    
T  33073206 aacaaccaagccttatcccactaagtgggatcggctacatggatcaaatgacgtcatattgttttattatacaccaaatttggatccaactcattgacct 33073107  T
Q  205 ct 206  Q
    ||    
T  33073106 ct 33073105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 33103173 - 33103092
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttca 216  Q
    ||||||| ||||||||||||| |  ||  ||||||||||| || ||||||  ||||| ||||||||| |||||| |||||||    
T  33103173 tcggctacatggatcaaattacgctatggtgttctatcataaaccatattccgattcaactcattaatctctaagtctttca 33103092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 207
Target Start/End: Complemental strand, 47652827 - 47652722
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| | ||||||| ||| | ||||||||||||||   || |||||||||||   ||| |||||    
T  47652827 aacaacaaccaagccttatcccactaagtggggtcggctacagggatcaagttacgccataatgttctatccgaaaccatatttggatcaaacttattaa 47652728  T
Q  202 cctcta 207  Q
    ||||||    
T  47652727 cctcta 47652722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 204
Target Start/End: Complemental strand, 47852334 - 47852265
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacct 204  Q
    ||||||| ||||||||||||| | ||||||||||||| ||  | || |||||||| | ||||||||||||    
T  47852334 tcggctacatggatcaaattacgccataatgttctatgatacaccacatttggatccaactcattaacct 47852265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 4604827 - 4604755
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||| |||||||||||||| || ||| || | | ||||| |||||||||| || | ||||||||||||||||    
T  4604827 aacaagaaccaagtcttatcccactaagtggggttggctacatggatcaaagtacgccataatgttctatcat 4604755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 38103617 - 38103719
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||||||||| || ||| || | ||||||| | |||||||||||   ||||||||| |||||| ||  |||||||||| | |||||||||    
T  38103617 aacaacaaccaagtcttatcccactaactggggtcggctaca-ggatcaaattacaccataatgtt-tatcataaacaatatttggatccaactcattaa 38103714  T
Q  202 cctct 206  Q
     ||||    
T  38103715 tctct 38103719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 38135251 - 38135327
Alignment:
Q  138 gctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatcttt 214  Q
    |||| ||||||||||||| | |||||| ||||||||| |  ||||||| | | | ||||||||| ||||||||||||    
T  38135251 gctagatggatcaaattacgccataatattctatcataacccatatttcggtccaactcattaatctctaaatcttt 38135327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 47848912 - 47848840
Alignment:
Q  143 atggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttc 215  Q
    |||||||||||||   |||||||||||||||| || ||||||||||| |  |||||||| | | |||||||||    
T  47848912 atggatcaaattaaaccataatgttctatcataaaccatatttggatccagctcattaatccccaaatctttc 47848840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 49029521 - 49029433
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| ||||||||||| ||  |||||||||    
T  49029521 ggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatggttt 49029433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 1e-25; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 103 - 214
Target Start/End: Complemental strand, 1793741 - 1793630
Alignment:
Q  103 acaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaac 202  Q
    |||||||| ||| ||||||||| ||| |||||||||||| ||| ||||||||| |||||| || |||||||| |||||||||||||| | ||||||| ||    
T  1793741 acaacaactaagccttatctcactaagtgagatcggctacatgaatcaaattacgtcatagtgctctatcataaatcatatttggatccaactcattgac 1793642  T
Q  203 ctctaaatcttt 214  Q
    ||||||||||||    
T  1793641 ctctaaatcttt 1793630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 51422010 - 51421887
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||  ||||| || ||| |||||| ||||| ||||||||||||| |||||||||||||||||| || ||| ||||||| | | |||||||    
T  51422010 aacaacaaccaagctttatcccactaagtgagattggctacatggatcaaattacgtcataatgttctatcataaaccatttttggatccaattcattaa 51421911  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||| |||| ||||    
T  51421910 cctctaaatctttcctaatagttt 51421887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 6957878 - 6957755
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || ||||||||| ||||||||||| | |||||| |||||||||||  |||| |||||||| | ||||||| |    
T  6957878 aacaacaaccaagccttatcccactaagtgggatcggctacatggatcaaatgacgtcatagtgttctatcatacatcaaatttggatccaactcattga 6957779  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  6957778 cctctaaatcctttctaatggttt 6957755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 56375570 - 56375447
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||||||||| || ||| |||| ||||||| ||||||||||| | |||||| |||||||||||  | || |||||||| | ||||||| |    
T  56375570 aacaacaaccaagtcttatcccactaagtgaggtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattca 56375471  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  56375470 cctctaaatcctttctaatggttt 56375447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 55008026 - 55007908
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||||| ||||||||| |||||||| || ||||||| | | | |||||||||    
T  55008026 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgtcataatgatctatcataaaccatatttcggtccaactcattaa 55007927  T
Q  202 cctctaaatctttcataat 220  Q
     ||||||||||||| ||||    
T  55007926 tctctaaatctttcttaat 55007908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 1777019 - 1777142
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| |||||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  1777019 aacaacaaccaagccttatcccattaagtggggtcggctacatggatcaaatgacgccatactgttctatcatacaccaaatttggatccaactcattga 1777118  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  1777119 cctctaaatcttttctaatggttt 1777142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 26037507 - 26037630
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||  |||||| || ||| || | ||||||| ||||||| ||||| | |||| ||||||||||| || ||||||||||| | ||||||| |    
T  26037507 aacaacaaccaaaccttatcccactaagtggggtcggctacatggatccaattacgccatagtgttctatcataaaccatatttggatccaactcattca 26037606  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||| |||| ||||    
T  26037607 cctctaaatctttcctaatagttt 26037630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 39708708 - 39708590
Alignment:
Q  107 caaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctct 206  Q
    ||||||||||||||| || ||| || | ||| ||| ||||||||||||| | |||| ||||||||||| || ||||||||||| | ||||||| ||||||    
T  39708708 caaccaagtcttatcccactaagtggggtcgactacatggatcaaattacgacatagtgttctatcataaaccatatttggatccaactcattgacctct 39708609  T
Q  207 aaatctttcataatggttt 225  Q
    ||||| ||  |||||||||    
T  39708608 aaatcctttctaatggttt 39708590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 436509 - 436400
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| ||| |||| |||||||||||  | || |||||||||| ||||||| |    
T  436509 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcatacaccaaatttggattcaactcattga 436410  T
Q  202 cctctaaatc 211  Q
    ||||||||||    
T  436409 cctctaaatc 436400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 8286719 - 8286596
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || |  |||||| ||||||||||| | |||||| ||||||||||| || || |||||||| | ||||||| |    
T  8286719 aacaacaaccaagccttatcccactaagtgggggcggctacatggatcaaatgacgtcatagtgttctatcataaaccaaatttggatccaactcattga 8286620  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  8286619 cctctaaatcctttctaatggttt 8286596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 16003206 - 16003083
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||||  ||||  ||||| || |||||  ||||||||| |||||| |||||| |||| |||||| |||||||||| ||| | ||||||| |    
T  16003206 aacaacaaccaagttatatcctattaaatgggatcgcttatatggattaaattacgtcatagtgttttatcataaatcatatttagatccaactcattga 16003107  T
Q  202 cctctaaatctttcataatggttt 225  Q
    ||||||||| |||  |||||||||    
T  16003106 cctctaaattttttctaatggttt 16003083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 35690551 - 35690428
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||| |||||||||||||| || ||| || | ||||||| ||||||||||||| | |||||||||||||||| || | |  ||||||   |||||||||    
T  35690551 aacaaaaaccaagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccctgattggatcaaactcattaa 35690452  T
Q  202 cctctaaatctttcataatggttt 225  Q
    ||||||||| |||| |||| ||||    
T  35690451 cctctaaatttttcgtaatagttt 35690428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 55771790 - 55771719
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatca 173  Q
    ||||||||| |||||||| |||||||| |||||||||||| ||||||||||  ||||||||||||| |||||    
T  55771790 aacaacaacaaagtcttaactcattaaatgagatcggctacatggatcaaaaaatgtcataatgttatatca 55771719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 55836026 - 55835955
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatca 173  Q
    ||||||||| |||||||| |||||||| |||||||||||| ||||||||||  ||||||||||||| |||||    
T  55836026 aacaacaacaaagtcttaactcattaaatgagatcggctacatggatcaaaaaatgtcataatgttatatca 55835955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 28236462 - 28236353
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||||||||| || ||| || | ||||||| || ||||||||||   |||||| ||||||||| || || |||||||| | ||||||| |    
T  28236462 aacaacaaccaagtcttatcccactaagtggggtcggctacatagatcaaattacaccataatattctatcataaaccaaatttggatccaactcattga 28236363  T
Q  202 cctctaaatc 211  Q
    ||||||||||    
T  28236362 cctctaaatc 28236353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 27450182 - 27450293
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||| |||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| ||||||||||  |||||||||||||| | ||||||| |    
T  27450182 aacagcaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaa-aatcatatttggatccaactcattga 27450280  T
Q  202 cctctaaatcttt 214  Q
    |||||||||||||    
T  27450281 cctctaaatcttt 27450293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 225
Target Start/End: Original strand, 37773468 - 37773576
Alignment:
Q  117 ttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttca 216  Q
    ||||||||||||  | | |||||||||| ||||||||||||||||| ||||||||||| || || || ||||| | ||||||| ||||| ||||| ||      
T  37773468 ttatctcattaagcggggtcggctatatagatcaaattatgtcatagtgttctatcataaaccaaatctggatccaactcattgacctccaaatcctttc 37773567  T
Q  217 taatggttt 225  Q
    |||||||||    
T  37773568 taatggttt 37773576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 53518366 - 53518438
Alignment:
Q  143 atggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttc 215  Q
    ||||||||||||| | |||| ||||||||||| || ||||||| ||| | |||||||||||||||||||||||    
T  53518366 atggatcaaattacgccatagtgttctatcataaaccatatttagatccaactcattaacctctaaatctttc 53518438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 53540567 - 53540487
Alignment:
Q  105 aacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatattt 185  Q
    ||||||||||||||||| || | | || | | ||||||||||||||||||||| |||||||||||||||| || |||||||    
T  53540567 aacaaccaagtcttatcccactcagtggggttggctatatggatcaaattatgccataatgttctatcataaaccatattt 53540487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 12443375 - 12443292
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatattt 185  Q
    ||||||||||||| ||||||  |  | ||| ||||||||| ||||||||||||||| |||||||||||||||| || |||||||    
T  12443375 aacaacaaccaagccttatcctacgatttgggatcggctacatggatcaaattatgccataatgttctatcataaaccatattt 12443292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 26024852 - 26024975
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| |||| ||||||| |||||| ||||||   |||||||||||||||| || ||| | | ||| | |||||||||    
T  26024852 aacaacaaccaagccttatcccactaagtgaggtcggctacatggataaaattacaccataatgttctatcataaaccatgtctcgatccaactcattaa 26024951  T
Q  202 cctctaaatctttcataatggttt 225  Q
     ||||| ||||||| |||| ||||    
T  26024952 tctctagatctttcttaatagttt 26024975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 52569517 - 52569640
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  52569517 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 52569616  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  52569617 cctctaaatcctttctaatggttt 52569640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 211
Target Start/End: Complemental strand, 7947214 - 7947108
Alignment:
Q  105 aacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacct 204  Q
    |||||||||| |||||| || ||| || | ||||||| |||||||||||||  | ||| ||||||||||| ||||| |||||||| | ||| ||| ||||    
T  7947214 aacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacatgatagtgttctatcataaatcaaatttggatccaactgattgacct 7947115  T
Q  205 ctaaatc 211  Q
    |||||||    
T  7947114 ctaaatc 7947108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 25575104 - 25574986
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | || |||| |||||||||||||   || ||||||||||||| || ||||||| ||| | |||||||||    
T  25575104 aacaacaaccaagccttatcccactaaatggggtctgctacatggatcaaattacaccacaatgttctatcataaaccatatttcgatccaactcattaa 25575005  T
Q  202 cctctaaatctttcataat 220  Q
     ||||| ||||||| ||||    
T  25575004 tctctagatctttcttaat 25574986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 220
Target Start/End: Complemental strand, 28486165 - 28486083
Alignment:
Q  138 gctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataat 220  Q
    |||| ||||||||||||| | |||| ||||| ||  | |||||||||||||| | ||||||||| ||||||||||||||||||    
T  28486165 gctacatggatcaaattacgccatattgttcaattgtaaatcatatttggatccaactcattaatctctaaatctttcataat 28486083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 171
Target Start/End: Complemental strand, 27983473 - 27983404
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctat 171  Q
    ||||||||||||  |||||| ||||||||| ||||||||| ||||||||||| | |||||| ||||||||    
T  27983473 aacaacaaccaaaccttatcccattaattgggatcggctacatggatcaaatgacgtcatagtgttctat 27983404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 31959816 - 31959925
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  31959816 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 31959915  T
Q  202 cctctaaatc 211  Q
    ||||||||||    
T  31959916 cctctaaatc 31959925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 226
Target Start/End: Complemental strand, 33227458 - 33227365
Alignment:
Q  133 gatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggtttt 226  Q
    ||||||||| ||||||||||| | |||||| |||||||||||  | || |||||||| | ||||||| ||||||||||| ||  ||||||||||    
T  33227458 gatcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatggtttt 33227365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 37798131 - 37798022
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||| ||||||| |||||| || ||| ||   ||||||| || |||||||| | |||||| ||||||||||| || ||||||||||||| ||||||| |    
T  37798131 aacaataaccaagccttatcccactaaatggagtcggctacattgatcaaatgacgtcatattgttctatcataaaccatatttggattcaactcattga 37798032  T
Q  202 cctctaaatc 211  Q
    | ||||||||    
T  37798031 cttctaaatc 37798022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 48609841 - 48609772
Alignment:
Q  138 gctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctcta 207  Q
    |||||||| |||||||||| ||||||||||| | ||| ||||||||||| ||||  ||||||||||||||    
T  48609841 gctatatgaatcaaattatatcataatgttcaagcataaatcatatttgtattcatctcattaacctcta 48609772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 31043309 - 31043229
Alignment:
Q  145 ggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    |||||||||||||  ||| ||||||||||  || ||||||||||| | ||||||||| ||||||||||||| |||| ||||    
T  31043309 ggatcaaattatgcaatagtgttctatcacaaaccatatttggatccaactcattaatctctaaatctttcctaatagttt 31043229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 33190853 - 33190973
Alignment:
Q  105 aacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacct 204  Q
    |||||||||| |||||| || ||  || | ||||||| |||| |||||| | |||||| |||||||||||  | || |||||||||| ||||||| ||||    
T  33190853 aacaaccaagccttatcccactaggtggggtcggctacatgggtcaaatgacgtcatagtgttctatcatacaccaaatttggattcaactcattgacct 33190952  T
Q  205 ctaaatctttcataatggttt 225  Q
    ||||||| ||  |||||||||    
T  33190953 ctaaatcctttctaatggttt 33190973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 47265197 - 47265305
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||| ||||||| |||||| || ||| |||| ||||||| |||||||||||||    ||| |||||||||||  |||| |||||||| | ||||||| |    
T  47265197 aacaataaccaagccttatcccactaagtgaggtcggctacatggatcaaattacactatagtgttctatcatagatcaaatttggatccaactcattga 47265296  T
Q  202 cctctaaat 210  Q
    |||||||||    
T  47265297 cctctaaat 47265305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 12494943 - 12494820
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | || |||| |||||| |||| | |||||| |||||||||||  | || |||||||| | ||||||| |    
T  12494943 aacaacaaccaagccttatcccactaagtggggtccgctacatggattaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattga 12494844  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  12494843 cctctaaatcctttctaatggttt 12494820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 21528568 - 21528445
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| |||||||||||     |||| ||||||||||  || |||||||| || | ||||||| |    
T  21528568 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgccaccatagtgttctatcaaaaaccatatttgaatccaactcattga 21528469  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  21528468 cctctaaatcttttctaatggttt 21528445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 23906299 - 23906422
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | || |||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  23906299 aacaacaaccaagccttatcccactaagtggggtcagctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 23906398  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  23906399 cctctaaatcctttctaatggttt 23906422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 32479318 - 32479195
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||| |  || ||| || | ||||||| ||||||||||| | | |||| ||||||||||  || ||||||| ||| | ||||||| |    
T  32479318 aacaacaaccaagcctttttccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatattttgatccaactcattga 32479219  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  32479218 cctctaaatcttttctaatggttt 32479195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 34208271 - 34208378
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || |||  | | |||  || ||||||||||||  | |||||||||||||||| || ||||||||||| | |||||||||    
T  34208271 aacaacaaccaagccttatcccaataaggggggtcgagtacatggatcaaattgcgccataatgttctatcataaaccatatttggatccaactcattaa 34208370  T
Q  202 cctctaaa 209  Q
     |||||||    
T  34208371 tctctaaa 34208378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 39100538 - 39100661
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| |||||| | |||| | ||||||||||||| || ||  |||||||||| | ||||||| |    
T  39100538 aacaacaaccaagccttatcccactaagtggggtcggctacatggattatattacgccataatgttctatgataaacaatatttggatccaactcattga 39100637  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||| ||||| ||  |||||||||    
T  39100638 cctccaaatcctttctaatggttt 39100661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 45204842 - 45204964
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| |  | | ||||| || |||||||||| | | |||||||||||||| || ||||||||||| | ||| |||||    
T  45204842 aacaacaaccaagccttatcccactaagttgggtgggctacatagatcaaattacgcc-taatgttctatcataaaccatatttggatccaacttattaa 45204940  T
Q  202 cctctaaatctttcataatggttt 225  Q
     ||||||||||||| |||| ||||    
T  45204941 actctaaatctttcctaatagttt 45204964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 48174095 - 48174218
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | || |||| ||||||||||| | | ||||||||| ||||||  | || |||||||| | ||||||| |    
T  48174095 aacaacaaccaagccttatcccactaagtggggtctgctacatggatcaaatgacgccataatgttttatcatacaccaaatttggatccaactcattga 48174194  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  48174195 cctctaaatcctttctaatggttt 48174218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 53708074 - 53707951
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||| |||| |||||| || ||| |||  ||| ||| ||||||||||| | |||||| |||||||||||  | || |||||||| | ||||||| |    
T  53708074 aacaacaatcaagccttatcccactaagtgatgtcgactaaatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattga 53707975  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  53707974 cctctaaatcctttctaatggttt 53707951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 55388213 - 55388331
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||| | | |||||||||||||   || ||||||||||||| |||||||||| |||   |||||||||    
T  55388213 aacaacaaccaagccttatcccactaagtggggtcgacaacatggatcaaattacaccacaatgttctatcataaatcatatttcgatctaactcattaa 55388312  T
Q  202 cctctaaatctttcataat 220  Q
     ||| ||||||||| ||||    
T  55388313 tctccaaatctttcttaat 55388331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 5306540 - 5306471
Alignment:
Q  138 gctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctcta 207  Q
    |||||||||||||||||| | ||||||||| | |||| || ||||||||||| | ||||||||| |||||    
T  5306540 gctatatggatcaaattacgccataatgttatgtcataaaccatatttggatccaactcattaatctcta 5306471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 20601699 - 20601756
Alignment:
Q  147 atcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacct 204  Q
    ||||||||| |||||||||||||||||| ||||||||||| || | ||||||| ||||    
T  20601699 atcaaattacgtcataatgttctatcataaatcatatttgaatccaactcattgacct 20601756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 25427864 - 25427917
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaatta 155  Q
    ||||||||||||||||||||||||||| || | |||| || |||||||||||||    
T  25427864 aacaacaaccaagtcttatctcattaagtggggtcggttacatggatcaaatta 25427917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 19154865 - 19154973
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | || |||  ||||||||||| | | |||| ||||||||||| || || |||||||| | ||||||| |    
T  19154865 aacaacaaccaagccttatcccactaagtggggtcagctgcatggatcaaataacgccatagtgttctatcataaaccaaatttggatccaactcattga 19154964  T
Q  202 cctctaaat 210  Q
    |||||||||    
T  19154965 cctctaaat 19154973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 20131025 - 20131093
Alignment:
Q  136 cggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacct 204  Q
    |||||| ||| |||||||||| | || |||||||||||| |||||||||| ||||  ||||||||||||    
T  20131025 cggctacatgaatcaaattatcttattatgttctatcataaatcatatttagattaaactcattaacct 20131093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 38809601 - 38809669
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttcta 170  Q
    ||||||| | |||||||||| |||||| || | | |||||||||||||||| |||| ||||||||||||    
T  38809601 aacaacagcgaagtcttatcccattaagtggggttggctatatggatcaaaatatgccataatgttcta 38809669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 40420261 - 40420321
Alignment:
Q  147 atcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctcta 207  Q
    ||||||||| ||| |||||||||||||| || |||||| |||||| ||||||||| |||||    
T  40420261 atcaaattacgtcgtaatgttctatcataaaccatattaggattcaactcattaatctcta 40420321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 48622545 - 48622657
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| |||||| |||| | | |||| |||||||||||  | || ||||||||   ||||||| |    
T  48622545 aacaacaaccaagccttatcccactaagtggggtcggctacatggattaaatgacgccatagtgttctatcatacaccaaatttggatcaaactcattga 48622644  T
Q  202 cctctaaatcttt 214  Q
    |||||||||||||    
T  48622645 cctctaaatcttt 48622657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 56439608 - 56439696
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    |||||||||||| |||||| |  ||||||||||||||| || ||||||| ||| | ||| |||||  || |||||||||||||| ||||    
T  56439608 ggctatatggattaaattacgctataatgttctatcataaaccatatttcgatccaactaattaatttccaaatctttcataatagttt 56439696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 13805267 - 13805350
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatattt 185  Q
    ||||||||||||| | |||| || ||| || | | ||||| ||||||||||||||  |||||||||||||||| || |||||||    
T  13805267 aacaacaaccaagccatatcccactaagtggggttggctacatggatcaaattatcccataatgttctatcataaaccatattt 13805350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 28550457 - 28550580
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||  |||||| || ||| || | || |||| || |||||||||||  ||||   ||||||||  || |||||||||||   |||||||||    
T  28550457 aacaacaaccaaaccttatcccaataagtggggtcagctacattgatcaaattataacatagctttctatcaaaaaccatatttggatcaaactcattaa 28550556  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||| |||| ||||    
T  28550557 cctctaaatctttcctaatagttt 28550580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 31459273 - 31459150
Alignment:
Q  103 acaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaac 202  Q
    |||||||||||| |||||| || ||| || | |||| || ||||||||| ||  | |||||||||| ||||   | |||||| |||| | |||||||||     
T  31459273 acaacaaccaagccttatcccactaagtggggtcgggtacatggatcaagttccgccataatgttcaatcacacaccatattgggatccaactcattaat 31459174  T
Q  203 ctctaaatctttcataatggtttt 226  Q
    ||||||||||||| |||| |||||    
T  31459173 ctctaaatctttcctaatagtttt 31459150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 4441100 - 4441010
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| ||||||||||| ||  |||||||||    
T  4441100 tcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatggttt 4441010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 30621244 - 30621326
Alignment:
Q  143 atggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||||||| ||| | |||||||||||||||| || ||||||| | | | || |||||| ||||||||||||| |||| ||||    
T  30621244 atggatcaagttaagccataatgttctatcataaaccatatttcggtccaacacattaatctctaaatctttcttaatagttt 30621326  T

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Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 54935394 - 54935348
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcatcaatcatat 183  Q
    ||||| |||||||||||||||| ||||||||||||||| || |||||    
T  54935394 ggctacatggatcaaattatgttataatgttctatcataaaccatat 54935348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 3979165 - 3979128
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||| ||||||||||||| ||||||||||||||||||    
T  3979165 ggctacatggatcaaattacgtcataatgttctatcat 3979128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 4879111 - 4879164
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaatta 155  Q
    ||||||||||||| |||||| || ||| |||| ||||||| |||||||||||||    
T  4879111 aacaacaaccaagccttatcccagtaagtgaggtcggctacatggatcaaatta 4879164  T

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Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 43434204 - 43434095
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||| ||| ||||||||||| | | | || ||||||||| |  |||| |||||||| | ||||||| |    
T  43434204 aacaacaaccaagccttatcccactaagtgggctcgactacatggatcaaatgacgccgtagtgttctatcctacatcaaatttggatccgactcattga 43434105  T
Q  202 cctctaaatc 211  Q
    ||||||||||    
T  43434104 cctctaaatc 43434095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 1211394 - 1211446
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaatt 154  Q
    |||||||||||||||||||| |||||| || | ||||||| ||| ||||||||    
T  1211394 aacaacaaccaagtcttatcccattaagtggggtcggctacatgaatcaaatt 1211446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 7274347 - 7274276
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||| |||| |||||| ||| | || ||||||||||||| |||||||||| | ||| |||||||||||    
T  7274347 aacaacaactaagttttatcttattgagtg-gatcggctatatgaatcaaattatattatagtgttctatcat 7274276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 225
Target Start/End: Original strand, 33225881 - 33225958
Alignment:
Q  146 gatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    |||||||| | |||||||||||||||||| || ||||||| |||   |||| |||| ||||||||||||| |||| ||||    
T  33225881 gatcaaatcacgtcataatgttctatcataaaacatattttgat--aactcgttaatctctaaatctttcttaatagttt 33225958  T

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Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 45209207 - 45209279
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||| |||||| || ||| || | ||||||| |||||||||| || | |||||| |||||||||    
T  45209207 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaactacgccataatattctatcat 45209279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 82998 - 82875
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||  |||||| || | ||||||| ||||||||||| | |||||| ||||||||||| |||||||||||||| | ||||||| |    
T  82998 aacaacaaccaagccttattccattaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcataaatcatatttggatccaactcattga 82899  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  82898 cctctaaatcctttctaatggttt 82875  T

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Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 12966314 - 12966434
Alignment:
Q  102 aacaacaaccaagtcttatctcatta-attgagatcggctatatggatcaaattatgtcataatg--ttctatcatcaatcatatttggattctactcat 198  Q
    |||||||||||||||||||||||||| |  | | |||||||||||||||||||||||||||||||   |||||||| || |||||||| |||| ||||||    
T  12966314 aacaacaaccaagtcttatctcattacacagtg-tcggctatatggatcaaattatgtcataatgctctctatcataaaccatatttgaattcaactcat 12966412  T
Q  199 taacctctaaatctttcataat 220  Q
    ||| ||||||||||||| ||||    
T  12966413 taatctctaaatctttcttaat 12966434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 490615 - 490502
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||| |||| |||||| || ||| || | ||||||| ||||||||||||| | |||||||||||||||| || ||||||||||| | |||||| ||    
T  490615 aacaacaaacaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcatcaa 490516  T
Q  202 cctctaaatctttc 215  Q
     |||||||||||||    
T  490515 tctctaaatctttc 490502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 44529505 - 44529395
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| ||| |||| ||||||||||| || || |||||||| | ||||||| |    
T  44529505 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcataaaccaaatttggatccaactcattga 44529406  T
Q  202 cctctaaatct 212  Q
    |||||||||||    
T  44529405 cctctaaatct 44529395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 29520929 - 29520820
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||  ||||| || ||| || | | ||||| ||||||||||||| | |||||||||||||||| || ||||||||||| | |||||||||    
T  29520929 aacaacaaccaagcattatcccactaaatggggtgggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcattaa 29520830  T
Q  202 cctctaaatc 211  Q
     |||||||||    
T  29520829 tctctaaatc 29520820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 30559932 - 30559860
Alignment:
Q  143 atggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttc 215  Q
    ||||||||||||| |||||||||||||||||| || ||||| ||||| | ||||||||| |||||||||||||    
T  30559932 atggatcaaattacgtcataatgttctatcataaaccatatatggatccaactcattaatctctaaatctttc 30559860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 43904700 - 43904784
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataa 219  Q
    ||||||| ||||||||||||| | |||||||||||||||| || ||||||| ||| | ||||||||| |||||||||| ||||||    
T  43904700 tcggctacatggatcaaattacgccataatgttctatcataaaccatatttagatccaactcattaatctctaaatctctcataa 43904784  T

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Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 35914603 - 35914686
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatattt 185  Q
    ||||||||||||||||||||||| ||| || | || |||| ||||||||||||| | |||||||||||||||| || |||||||    
T  35914603 aacaacaaccaagtcttatctcactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatattt 35914686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 36545429 - 36545306
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | |||||| |||||||||||  | || |||||||| | ||||||| |    
T  36545429 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattga 36545330  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  36545329 cctctaaatcctttctaatggttt 36545306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 42469729 - 42469852
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | || |||| ||||||||||| | | |||| ||||||||||  || ||||||||||| | ||||||| |    
T  42469729 aacaacaaccaagccttatcccaataagtggggtcagctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattga 42469828  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  42469829 cctctaaatcttttctaatggttt 42469852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 187
Target Start/End: Original strand, 3464173 - 3464258
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttgg 187  Q
    |||||||| ||||||||||| |||||| ||  |||| |||||||||||||| |||  |||||||||||||||| ||| ||||||||    
T  3464173 aacaacaatcaagtcttatcccattaagtggaatcgactatatggatcaaactataccataatgttctatcataaattatatttgg 3464258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 21425290 - 21425213
Alignment:
Q  138 gctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttc 215  Q
    |||| ||||||||||||||| ||||||| |||||||| |||||||||| ||| | ||||||||| ||||| |||||||    
T  21425290 gctacatggatcaaattatgccataatggtctatcataaatcatatttcgatccaactcattaatctctatatctttc 21425213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 42584638 - 42584526
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||| ||||||||||| || ||| || | ||||||| | | ||||||||| |||||||||||||||||| || ||||||||||| | | |||||||    
T  42584638 aacaacaatcaagtcttatcccactaagtggggtcggctacaag-atcaaattacgtcataatgttctatcataaaccatatttggatccaaatcattaa 42584540  T
Q  202 cctctaaatctttc 215  Q
    ||| || |||||||    
T  42584539 cctatagatctttc 42584526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 225
Target Start/End: Original strand, 45041320 - 45041440
Alignment:
Q  104 caacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacc 203  Q
    ||||||||||| |||||| || ||| || | || |||| ||||||||||||| | |||||||  ||||||| || |||||| |||| | |||||||||||    
T  45041320 caacaaccaagccttatcccactaagtggggtcagctacatggatcaaattacgccataatgcgctatcataaaccatatt-ggatccaactcattaacc 45041418  T
Q  204 tctaaatctttcataatggttt 225  Q
    |||||||||||| |||| ||||    
T  45041419 tctaaatctttcctaatagttt 45041440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 213
Target Start/End: Original strand, 28269685 - 28269792
Alignment:
Q  105 aacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacct 204  Q
    |||||| ||||||||||||||||  |  | || | || ||||||||||||||||||||| ||| |||||| ||| | |||||||| | ||||||||||||    
T  28269685 aacaacaaagtcttatctcattatgtatggtctgttacatggatcaaattatgtcataacgttatatcat-aattaaatttggatccaactcattaacct 28269783  T
Q  205 ctaaatctt 213  Q
    |||||||||    
T  28269784 ctaaatctt 28269792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 11523725 - 11523848
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  11523725 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 11523824  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  11523825 cctctaaatcctttctaatggttt 11523848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 41031422 - 41031489
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttct 169  Q
    ||||||||||||| |||||| || ||| || | |||||||||||||||||||||| ||||||||||||    
T  41031422 aacaacaaccaagccttatcccactaagtggggtcggctatatggatcaaattatctcataatgttct 41031489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 41031528 - 41031595
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttct 169  Q
    ||||||||||||| |||||| || ||| || | |||||||||||||||||||||| ||||||||||||    
T  41031528 aacaacaaccaagccttatcccactaagtggggtcggctatatggatcaaattatctcataatgttct 41031595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 25300335 - 25300270
Alignment:
Q  146 gatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatc 211  Q
    ||||||||||||||||| |||| |||||| || ||||||||||| | ||||||| |||||||||||    
T  25300335 gatcaaattatgtcatagtgttatatcataaaccatatttggatccaactcattgacctctaaatc 25300270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 36565243 - 36565366
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||| || |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  36565243 aacaacaaccgagccttatcccactaagtggggtcggctacatggatcaaataacgccatagtgttctatcatacaccaaatttggatccaactcattga 36565342  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  36565343 cctctaaatcctttctaatggttt 36565366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 42854006 - 42854129
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||| |||||  |||||| || ||| || | ||||||| ||||||||||| | | |||| |||| |||||  || ||||||||||| | ||||||| |    
T  42854006 aacaaccaccaaaccttatcccactaaatggggtcggctacatggatcaaatgacgccatagtgttatatcaaaaaccatatttggatccaactcattga 42854105  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  42854106 cctctaaatcttttctaatggttt 42854129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 45419515 - 45419428
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggat 189  Q
    ||||||||||||| |||||| || ||| || | ||||||| |||||||||||||   |||||||||||||||| || || ||||||||    
T  45419515 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacaccataatgttctatcataaaccaaatttggat 45419428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 1928589 - 1928659
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatc 172  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||||| | ||||||||||||||    
T  1928589 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatc 1928659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 225
Target Start/End: Original strand, 12491141 - 12491263
Alignment:
Q  103 acaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaac 202  Q
    |||||||| ||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| ||    
T  12491141 acaacaactaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgac 12491240  T
Q  203 ctctaaatctttcataatggttt 225  Q
    ||||||||| ||  |||||||||    
T  12491241 ctctaaatcctttctaatggttt 12491263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 18741908 - 18741838
Alignment:
Q  106 acaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatca 176  Q
    |||||||||||||||| || ||| || | |||||||  |||||||||||| ||||||||||||||| ||||    
T  18741908 acaaccaagtcttatcccactaagtggggtcggctacttggatcaaattacgtcataatgttctattatca 18741838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 18746872 - 18746802
Alignment:
Q  106 acaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatca 176  Q
    |||||||||||||||| || ||| || | |||||||  |||||||||||| ||||||||||||||| ||||    
T  18746872 acaaccaagtcttatcccactaagtggggtcggctacttggatcaaattacgtcataatgttctattatca 18746802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 32931238 - 32931168
Alignment:
Q  104 caacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||| ||| || || ||| || | ||||||| ||||||||||||||| ||||||||||||||||    
T  32931238 caacaaccaaggcttttcccactaagtggggtcggctacatggatcaaattatgccataatgttctatcat 32931168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 14742084 - 14742204
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| ||||||   |||||  |||||||||| | ||||||| |    
T  14742084 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttct---atcaaaaatatttggatccaactcattga 14742180  T
Q  202 cctctaaatctttcataatggttt 225  Q
    | |||||||||||  |||||||||    
T  14742181 cttctaaatcttttctaatggttt 14742204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 25289000 - 25288935
Alignment:
Q  146 gatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatc 211  Q
    |||||||||||||||||  ||| |||||| || ||||||||||| | ||||||| |||||||||||    
T  25289000 gatcaaattatgtcatagagttatatcataaaccatatttggatccaactcattgacctctaaatc 25288935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 27556304 - 27556376
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    |||||||||||||  ||| | || ||| || | ||||||| ||||||||||||||| ||||||||||||||||    
T  27556304 aacaacaaccaagctttaacccactaagtggggtcggctacatggatcaaattatgccataatgttctatcat 27556376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 31716064 - 31715992
Alignment:
Q  138 gctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaat 210  Q
    |||| ||||||||||||| | |||||||||||||| | || ||||||||||| | ||| ||||| ||||||||    
T  31716064 gctacatggatcaaattacgccataatgttctatcttaaaccatatttggatccaactaattaatctctaaat 31715992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 37078029 - 37077908
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||| ||||| |||||| || | ||||||  ||||||||||||| |||  | ||||||||| || |   ||||||||| | ||||||| |    
T  37078029 aacaacaaccaagttttatcccattaagtggggtcggctgcatggatcaaattacgtc--agtgttctatcttccaaagtatttggatccaactcattga 37077932  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  37077931 cctctaaatcctttctaatggttt 37077908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 225
Target Start/End: Complemental strand, 39947074 - 39947014
Alignment:
Q  165 gttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    |||||||||| || || |||||||||| ||||||| ||||||||||||||  |||||||||    
T  39947074 gttctatcataaaccaaatttggattcaactcattgacctctaaatcttttctaatggttt 39947014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 215
Target Start/End: Original strand, 41971793 - 41971905
Alignment:
Q  103 acaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaac 202  Q
    ||||||||||||| ||| | |||||| |||| || |||| ||| || | |||| |||||||||||||||||| ||  ||||||   | | |||||||||     
T  41971793 acaacaaccaagttttaccccattaaatgaggtcagctacatgaattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaat 41971892  T
Q  203 ctctaaatctttc 215  Q
    |||||||||||||    
T  41971893 ctctaaatctttc 41971905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 2216566 - 2216456
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||| |||||| ||||||||| | | || | ||||||| |||||||||||||    ||||||||||||||| || |||||| |||| | ||||||| |    
T  2216566 aacaaccaccaagccttatctcactgagtggggtcggctacatggatcaaattacactataatgttctatcat-aaacatattaggatccaactcattga 2216468  T
Q  202 cctctaaatctt 213  Q
     |||||||||||    
T  2216467 tctctaaatctt 2216456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 2518400 - 2518483
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatattt 185  Q
    ||||||||||||  ||||||| | ||| || | || |||| | ||||||||||||| |||||||||||||||  ||||||||||    
T  2518400 aacaacaaccaaaccttatcttactaagtggggtcagctacaaggatcaaattatgccataatgttctatcagaaatcatattt 2518483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 4955471 - 4955388
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatattt 185  Q
    ||||||||||||  ||||||||| ||| |||||||| ||| ||  ||||||||| ||| ||||||| ||| || ||||||||||    
T  4955471 aacaacaaccaaaccttatctcactaagtgagatcgactacataaatcaaattacgtcgtaatgttttattataaatcatattt 4955388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 21121425 - 21121303
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||| || || ||| || | ||||||| ||| ||||||||| | |||| ||||||||||| || |||||| |||| | ||||||| |    
T  21121425 aacaacaaccaagccttttcccactaagtggggtcggctacatg-atcaaattacgccatagtgttctatcataaaccatattaggatccaactcattga 21121327  T
Q  202 cctctaaatctttcataatggttt 225  Q
    | |||||||| ||  |||||||||    
T  21121326 cttctaaatcctttctaatggttt 21121303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 25473405 - 25473528
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | |  ||| |||||||||||  | || ||||||||   ||||||| |    
T  25473405 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgctatagtgttctatcatacaccaaatttggatcaaactcattga 25473504  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  25473505 cctctaaatcctttctaatggttt 25473528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 36042478 - 36042407
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatca 173  Q
    |||||||||||| |||| || ||||||||| | || |||| ||||||||||| | |||||| ||||||||||    
T  36042478 aacaacaaccaaatcttttcccattaattggggtccgctacatggatcaaatgacgtcatagtgttctatca 36042407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 40813604 - 40813481
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||| |||| ||||| || ||| || | | ||||| ||||||||||| |||||||| ||||||||||   | || |||||||| | ||||| | |    
T  40813604 aacaacaacgaagttttatcccactaagtggggttggctacatggatcaaatgatgtcatagtgttctatcacacaccaaatttggatccaactcactga 40813505  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  40813504 cctctaaatcctttctaatggttt 40813481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 44047534 - 44047641
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | || |||| ||||||||||| | | |||  ||||||||||| || || |||||||| | ||||||| |    
T  44047534 aacaacaaccaagccttatcccactaagtggggtcagctacatggatcaaatgacgccatggtgttctatcataaaccaaatttggatccaactcattga 44047633  T
Q  202 cctctaaa 209  Q
    ||||||||    
T  44047634 cctctaaa 44047641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Complemental strand, 12611777 - 12611727
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaa 152  Q
    ||||||||||||| |||||| || |||||| ||||||||| ||||||||||    
T  12611777 aacaacaaccaagccttatcccactaattgggatcggctacatggatcaaa 12611727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 12026002 - 12025933
Alignment:
Q  157 gtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggtttt 226  Q
    |||||| ||||||||||  || ||||||||||| | ||| ||| ||||||||||||||  ||||||||||    
T  12026002 gtcatagtgttctatcaaaaaccatatttggatccaacttattgacctctaaatcttttctaatggtttt 12025933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 24558730 - 24558693
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatc 172  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  24558730 tcggctacatggatcaaattacgtcataatgttctatc 24558693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 36069847 - 36069774
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaat 210  Q
    ||||||||||||||||||| | | |||||||||||||| || |||||||  |  | ||||||||| ||||||||    
T  36069847 ggctatatggatcaaattacgccgtaatgttctatcataaaccatatttctacccaactcattaatctctaaat 36069774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 15215414 - 15215526
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||||||  | ||| || | ||||||| |||||||| || | |||||| |||||||| |  || |||||||||||   ||||||| |    
T  15215414 aacaacaaccaagccttatcctactaagtggggtcggctacatggatcatatgacgtcatagtgttctattaaaaaccatatttggatcaaactcattga 15215513  T
Q  202 cctctaaatcttt 214  Q
     ||||||||||||    
T  15215514 tctctaaatcttt 15215526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 29736042 - 29735998
Alignment:
Q  147 atcaaattatgtcataatgttctatcatcaatcatatttggattc 191  Q
    ||||||||| ||||||| |||| ||||| ||||||||||||||||    
T  29736042 atcaaattacgtcataaagttcaatcataaatcatatttggattc 29735998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 32276965 - 32276893
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    |||||||||||||  ||||| || ||| || | ||| ||| ||||||||||||| | ||||||||||||||||    
T  32276965 aacaacaaccaagctttatcccactaagtgggttcgtctacatggatcaaattacgccataatgttctatcat 32276893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 32569712 - 32569784
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    |||||||||||||||||||| || ||| || | ||||||| ||  ||||||| | |||||| |||||||||||    
T  32569712 aacaacaaccaagtcttatcccactaaatggggtcggctacataaatcaaatgacgtcatagtgttctatcat 32569784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 39967501 - 39967569
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttcta 170  Q
    |||||||||||||  ||||| || ||| || ||||||||| |||||||||| || | ||||||||||||    
T  39967501 aacaacaaccaagcattatcacaataagtgggatcggctacatggatcaaactacgccataatgttcta 39967569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 54128659 - 54128546
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||| ||| ||||||||||||||| |||||||||||||||| || ||||||||| | | ||||||| |    
T  54128659 aacaacaaccaagccttatcccactaagtggggtcgcctacatggatcaaattatgccataatgttctatcataaaccatatttgggtccaactcattga 54128560  T
Q  202 cctctaaatctttc 215  Q
    ||||||||||||||    
T  54128559 cctctaaatctttc 54128546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 49042217 - 49042093
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat-caatcatatttggattctactcatta 200  Q
    ||||||||||||| |||||||||  || || | ||||||| ||||||||||||| | |||| |||||||||||  || ||||||||||| | ||||||||    
T  49042217 aacaacaaccaagccttatctcaccaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaaccatatttggatccaactcatta 49042118  T
Q  201 acctctaaatctttcataatggttt 225  Q
    ||||||||||||||| |||| ||||    
T  49042117 acctctaaatctttcctaatagttt 49042093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 53519860 - 53519736
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||||||||| ||| || | ||||||| ||||||||||| | |||||| ||||||||||  || | ||||||||| | ||||||| |    
T  53519860 aacaacaaccaagccttatctcactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcaaaaaccttatttggatccaactcattga 53519761  T
Q  202 cctctaaatctttcataatggtttt 226  Q
    |||||||||||||  ||||||||||    
T  53519760 cctctaaatcttttttaatggtttt 53519736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 45289093 - 45289216
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | | ||| | |||||||||||||||  ||||||||||||||| || ||||||||||| | |||||||||    
T  45289093 aacaacaaccaagccttatcccactaagtggggttggcgacatggatcaaattatgctataatgttctatcataaaccatatttggatccaactcattaa 45289192  T
Q  202 cctctaaatctttcataatggttt 225  Q
     ||||||||||||| |||| ||||    
T  45289193 tctctaaatctttcctaatagttt 45289216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 15296187 - 15296064
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||| | |||||||||||||   ||||||||||||||   |||||||||||||| | | |||||||    
T  15296187 aacaacaaccaagccttatcccactaagtggggtcggccacatggatcaaattacaccataatgttctatccgaaatcatatttggatccaattcattaa 15296088  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||| |||| ||||    
T  15296087 cctctaaatctttcctaatagttt 15296064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 35033426 - 35033303
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||  |||| ||||||| ||||||||||| | | |||| ||||||||||  || ||||||||||| | ||||||| |    
T  35033426 aacaacaaccaagccttatcccactagatgaggtcggctacatggatcaaataacgccatagtgttctatcaaaaaccatatttggatccaactcattga 35033327  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  35033326 cctctaaatcttttctaatggttt 35033303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 48508515 - 48508392
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||||| | |||| ||||||||||| || |||||||| || | ||||||| |    
T  48508515 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttgaatccaactcattga 48508416  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  48508415 cctctaaatcctttctaatggttt 48508392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 52678852 - 52678975
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||| |||| |||||| | ||| |||| | | ||  ||||||||||||| |  ||||| || |||||| ||||||||||| |||| |||||||||    
T  52678852 aacaacaactaagttttatcttactaaatgaggttgactgcatggatcaaattacgctataatattatatcatgaatcatatttgaattcaactcattaa 52678951  T
Q  202 cctctaaatctttcataatggttt 225  Q
    ||||||||||||||||||| ||||    
T  52678952 cctctaaatctttcataatagttt 52678975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 202
Target Start/End: Original strand, 40106622 - 40106722
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||  ||| || ||||||||||||||||||||||||||||| || ||||||||||| | |||||||||    
T  40106622 aacaacaaccaagccttatcccactaagtggggtccactacattgatcaaattatgtcataatgttctatcataaaccatatttggatccaactcattaa 40106721  T
Q  202 c 202  Q
    |    
T  40106722 c 40106722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 52139080 - 52138957
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | |||||| |||||||||||  | || |||||||| | ||||||| |    
T  52139080 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaataacgtcatagtgttctatcatacaccaaatttggatccaactcattga 52138981  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  52138980 cctctaaatcctttctaatggttt 52138957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 39208888 - 39208790
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcatta 200  Q
    ||||||||||||| | |||| || ||| || | ||  ||| ||||||||||||| |||||||||||||||||| || ||||||||||| ||||||||||    
T  39208888 aacaacaaccaagccatatcccactaactggggtcctctacatggatcaaattacgtcataatgttctatcataaaccatatttggatcctactcatta 39208790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 54279294 - 54279177
Alignment:
Q  108 aaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctcta 207  Q
    ||||||||||||||| ||||| || ||||||||| || |||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |||||||    
T  54279294 aaccaagtcttatcttattaagtgggatcggctacattgatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattgacctcta 54279195  T
Q  208 aatctttcataatggttt 225  Q
    |||| ||  |||||||||    
T  54279194 aatcctttctaatggttt 54279177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 12096707 - 12096831
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  12096707 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 12096806  T
Q  202 cctctaaatctttcataatggtttt 226  Q
    |||||||||| ||  ||||||||||    
T  12096807 cctctaaatcctttctaatggtttt 12096831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 19676086 - 19676206
Alignment:
Q  105 aacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacct 204  Q
    |||||||||| |||||| || ||| || | || |||| ||||||||||| | | ||||||| ||||||||  | ||||||||||| | ||||||||||||    
T  19676086 aacaaccaagccttatcccactaagtggggtcagctacatggatcaaatcacgccataatgctctatcatacagcatatttggatccaactcattaacct 19676185  T
Q  205 ctaaatctttcataatggttt 225  Q
    |||||| |||| |||| ||||    
T  19676186 ctaaatttttcctaatagttt 19676206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 36304246 - 36304122
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||| || ||| || |||| | || | ||||||| ||||||||||||| | |||||||| ||||||| || ||||||| ||| | |||||||||    
T  36304246 aacaacaaccgagccttgtcacattgagtggggtcggctacatggatcaaattacgccataatgtcctatcataaaccatattttgatccaactcattaa 36304147  T
Q  202 cctctaaatctttcataatggtttt 226  Q
     ||||| ||||||| |||| |||||    
T  36304146 tctctagatctttcttaatagtttt 36304122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 225
Target Start/End: Original strand, 39600682 - 39600806
Alignment:
Q  101 gaacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcatta 200  Q
    |||||| |||||||||||||| ||  || || | | || || |||||||||||||   |||||||||||||| | || || |||||||| | ||||||||    
T  39600682 gaacaaaaaccaagtcttatcccacaaagtggggttggttagatggatcaaattacaccataatgttctatcgtaaaccagatttggatccaactcatta 39600781  T
Q  201 acctctaaatctttcataatggttt 225  Q
    ||||||||||||||| |||| ||||    
T  39600782 acctctaaatctttcttaatagttt 39600806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 5169112 - 5168989
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| ||||||||||  || ||||||||||| | ||||||| |    
T  5169112 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattga 5169013  T
Q  202 cctctaaatctttcataatggttt 225  Q
    ||| |||||| ||  |||||||||    
T  5169012 cctataaatcctttctaatggttt 5168989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 174
Target Start/End: Complemental strand, 32170684 - 32170613
Alignment:
Q  103 acaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||  |||||||| ||| || | ||||||| ||||||||||||||||||||||||| ||||||    
T  32170684 acaacaaccaagctttatctcactaagtggggtcggctacatggatcaaattatgtcataatgttatatcat 32170613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 209
Target Start/End: Complemental strand, 38060994 - 38060887
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||| ||||||| || ||| || | ||||||| ||||||||||||| | |||  ||||||||||| || ||||||||||| | ||||||| |    
T  38060994 aacaacaaccaattcttatcccactaagtggggtcggctacatggatcaaattacgccatggtgttctatcataaaccatatttggatccaactcattga 38060895  T
Q  202 cctctaaa 209  Q
    | ||||||    
T  38060894 cttctaaa 38060887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 53262421 - 53262298
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| || |||||||| | | |||| ||||||||||  || ||||||||||| | ||||||| |    
T  53262421 aacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattga 53262322  T
Q  202 cctctaaatctttcataatggttt 225  Q
    ||||||||||| |  |||||||||    
T  53262321 cctctaaatctcttctaatggttt 53262298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 138 - 220
Target Start/End: Complemental strand, 29601136 - 29601054
Alignment:
Q  138 gctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataat 220  Q
    |||| |||||||||||||  ||||||||||||||||| ||  ||||||| || | ||||||||| ||||||||||||| ||||    
T  29601136 gctacatggatcaaattacatcataatgttctatcataaactatatttgaatccaactcattaatctctaaatctttcttaat 29601054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 28245717 - 28245608
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||| ||| |||| ||||||||| ||| || ||||||||| ||||||||||| | |||||| |||||||| ||  | || |||||||| | ||||||| |    
T  28245717 aacagcaatcaagccttatctcactaagtgggatcggctacatggatcaaatgacgtcatagtgttctattatacaccaaatttggatccaactcattga 28245618  T
Q  202 cctctaaatc 211  Q
    ||||||||||    
T  28245617 cctctaaatc 28245608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 48953454 - 48953523
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacct 204  Q
    ||||||| |||||| |||||| |||||| ||||||||||| |||||||||||||| | ||||||| ||||    
T  48953454 tcggctacatggattaaattacgtcatagtgttctatcataaatcatatttggatccaactcattgacct 48953523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 52156086 - 52156195
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||| || |||||| || ||| || | ||||||| |||||||| || | | |||| ||||||||||| || ||||||||||| | ||||||| |    
T  52156086 aacaacaaccgagccttatcccactaagtggggtcggctacatggatcagatgacgccatagtgttctatcataaaccatatttggatccaactcattga 52156185  T
Q  202 cctctaaatc 211  Q
    ||||||||||    
T  52156186 cctctaaatc 52156195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 19758131 - 19758043
Alignment:
Q  138 gctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggtttt 226  Q
    |||| ||||||||||||||  |||||||||||||||| || ||||||  ||| | ||||||||| |||||||| |||| |||| |||||    
T  19758131 gctacatggatcaaattataccataatgttctatcataaaccatattgagatccaactcattaatctctaaatatttcctaatagtttt 19758043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 214
Target Start/End: Complemental strand, 26490595 - 26490483
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||| |||||||||||| | ||| || ||||| ||||||||||||||||| | |||||| ||||||    ||||| ||||||||   ||||||||     
T  26490595 aacaacaatcaagtcttatcttactaagtgggatcgactatatggatcaaattacgccataatattctatatgaaatcacatttggatcaaactcattag 26490496  T
Q  202 cctctaaatcttt 214  Q
     ||||||||||||    
T  26490495 tctctaaatcttt 26490483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 52927852 - 52927936
Alignment:
Q  104 caacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttgga 188  Q
    ||||||||||| |||||| || ||| || | ||||||| ||||||||||||||| ||||||||||| || | || ||||||||||    
T  52927852 caacaaccaagccttatcccactaagtggggtcggctacatggatcaaattatgccataatgttctgtcgtaaaccatatttgga 52927936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 22352 - 22229
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||  ||||| || ||| || | ||||||| || |||||||| | | |||| ||||||||||  || ||||||||||| | ||||||| |    
T  22352 aacaacaaccaagctttatcccactaagtggggtcggctacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattga 22253  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  22252 cctctaaatcctttctaatggttt 22229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 14415262 - 14415360
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||||||||| || ||| || | ||||||| ||| ||||||||||| ||||||||| |||||| || ||||| ||| | | |||||||||    
T  14415262 aacaacaaccaagtcttatcccactaagtggggtcggctacatg-atcaaattatgccataatgttatatcataaaccatatgtgggtccaactcattaa 14415360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 40991711 - 40991628
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatattt 185  Q
    ||||||| ||||||||||||||| ||| || | || |||| |||||||||||||   |||||||||||||||| || |||||||    
T  40991711 aacaacagccaagtcttatctcactaagtggggtcagctacatggatcaaattacaccataatgttctatcataaaccatattt 40991628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 221
Target Start/End: Original strand, 48712077 - 48712196
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||  ||||| || ||| || ||||  ||| |||||| |||| ||||||||||||| |||||| || |||||||| || | |||||| ||    
T  48712077 aacaacaaccaagcattatcccactaagtgggatcaactacatggatgaaataatgtcataatgttatatcataaaccatatttgaatccaactcatcaa 48712176  T
Q  202 cctctaaatctttcataatg 221  Q
      |||||||||||| |||||    
T  48712177 tatctaaatctttcctaatg 48712196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 40116348 - 40116450
Alignment:
Q  110 ccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaa 209  Q
    ||||| |||||| || |||  ||| |||||||  |||||||||||| | |||||||||||||||| || ||||||| | | | ||||||||| |||||||    
T  40116348 ccaagccttatcccactaagcgaggtcggctacgtggatcaaattacgccataatgttctatcataaaccatatttcggtccaactcattaatctctaaa 40116447  T
Q  210 tct 212  Q
    |||    
T  40116448 tct 40116450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 184
Target Start/End: Original strand, 45486851 - 45486933
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatt 184  Q
    |||||||||||||  ||||| || ||| || |  |||||| ||||||||||||||| |||||||||||||||| || ||||||    
T  45486851 aacaacaaccaagctttatcccactaagtggggccggctacatggatcaaattatgccataatgttctatcataaaccatatt 45486933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 207
Target Start/End: Original strand, 2133614 - 2133719
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | |||  || ||||||||||| | | |||| ||||||||||| ||  |||||||||||| ||||||| |    
T  2133614 aacaacaaccaagccttatcccactaagtggggtcgagtacatggatcaaatcacgccatagtgttctatcataaactatatttggattcaactcattga 2133713  T
Q  202 cctcta 207  Q
    ||||||    
T  2133714 cctcta 2133719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 35481208 - 35481143
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgtt 167  Q
    ||||||||||||| |||||| |||||| || | ||||||| ||| ||||||||| |||||||||||    
T  35481208 aacaacaaccaagccttatcccattaagtggggtcggctaaatgaatcaaattacgtcataatgtt 35481143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 225
Target Start/End: Original strand, 50960641 - 50960762
Alignment:
Q  104 caacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacc 203  Q
    ||||||||||| |||||| || ||| || | | ||||| |||||||||||||   ||||||| ||||| ||  | ||||||||||| | ||||||||| |    
T  50960641 caacaaccaagccttatcccactaagtggggttggctaaatggatcaaattacaccataatggtctatgatacaccatatttggatccaactcattaatc 50960740  T
Q  204 tctaaatctttcataatggttt 225  Q
    |||||| ||||| |||| ||||    
T  50960741 tctaaacctttcctaatagttt 50960762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 7895882 - 7895954
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||| |||||| |||||| || | ||||||| ||||||||||| | | |||| |||||||||||    
T  7895882 aacaacaaccaagccttatcccattaagtggggtcggctacatggatcaaatgacgccatagtgttctatcat 7895954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 226
Target Start/End: Complemental strand, 19737228 - 19737140
Alignment:
Q  138 gctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggtttt 226  Q
    |||| ||||||||||||||  ||||||||| |||||| || ||||||  ||| | ||||||||| |||||||| |||| |||| |||||    
T  19737228 gctacatggatcaaattataccataatgttttatcataaaccatattgagatccaactcattaatctctaaatatttcctaatagtttt 19737140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 225
Target Start/End: Original strand, 23534576 - 23534695
Alignment:
Q  105 aacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacct 204  Q
    |||||||||| |||||| ||  || |||| ||| ||| ||||||||||||| | |||||||||||||||| |||||||||    | | ||||||||| ||    
T  23534576 aacaaccaagccttatc-cacaaagtgaggtcgactacatggatcaaattacgccataatgttctatcataaatcatattacagtccaactcattaatct 23534674  T
Q  205 ctaaatctttcataatggttt 225  Q
    |||| |||||| |||| ||||    
T  23534675 ctaagtctttcctaatagttt 23534695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 38431069 - 38431021
Alignment:
Q  161 taatgttctatcatcaatcatatttggattctactcattaacctctaaa 209  Q
    |||||||||||||| || ||||||||||| | |||||||||||||||||    
T  38431069 taatgttctatcataaaccatatttggatccaactcattaacctctaaa 38431021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 49841860 - 49841784
Alignment:
Q  138 gctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatcttt 214  Q
    |||| ||||||||||||||| ||||||||||||||||  | ||||||| ||| | ||||||||| || || ||||||    
T  49841860 gctacatggatcaaattatgccataatgttctatcatataccatatttcgatccaactcattaatctttagatcttt 49841784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 213
Target Start/End: Original strand, 311311 - 311422
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||| ||||||| | | |||| ||||||||||  || ||||| ||||| | ||| ||| |    
T  311311 aacaacaaccaagccttatcccactaagtggggtcggctacatgtatcaaatgacgccatagtgttctatcaaaaaccatatctggatccaactaattga 311410  T
Q  202 cctctaaatctt 213  Q
    ||||||||||||    
T  311411 cctctaaatctt 311422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 25191657 - 25191534
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||  ||||| || ||| || |||| |||| ||||||||||| | | |||| ||||||||||  || ||||||| |||   | ||||| |    
T  25191657 aacaacaaccaagcattatcccactaagtgggatcagctacatggatcaaatgacgccatagtgttctatcaaaaaccatattttgatctaattcattga 25191558  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  25191557 cctctaaatcttttctaatggttt 25191534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 49503570 - 49503693
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| |  | ||||||| ||||||||||||| | |||||| || ||||   || ||||||||||  | |||||||||    
T  49503570 aacaacaaccaagccttatcccactaagtagggtcggctacatggatcaaattacgccataatattatatccaaaaccatatttggacccaactcattaa 49503669  T
Q  202 cctctaaatctttcataatggttt 225  Q
    ||  |||||||||| |||| ||||    
T  49503670 ccgttaaatctttcctaatagttt 49503693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 51447719 - 51447842
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || |  |||||| ||| ||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  51447719 aacaacaaccaagccttatcccactaaatggggccggctacatgaatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 51447818  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  51447819 cctctaaatcctttctaatggttt 51447842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 39235361 - 39235295
Alignment:
Q  159 cataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    |||||||||||||| | || ||||||| ||| | |||||||||| |||||||||||| |||| ||||    
T  39235361 cataatgttctatcgtaaaccatatttagatccaactcattaacttctaaatctttcctaatagttt 39235295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 42510051 - 42510141
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||||| ||||||||||||| | |||||||||| ||||| || ||||||| | | | ||||||| |  || ||||||||| |||||||||    
T  42510051 tcggctacatggatcaaattacgccataatgttcaatcataaaccatattttggtccaactcatttatttccaaatctttcctaatggttt 42510141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 54365010 - 54365060
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatattt 185  Q
    ||||||| ||||||||||||| |||||| ||||||||||| || |||||||    
T  54365010 tcggctacatggatcaaattacgtcatagtgttctatcataaaccatattt 54365060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 38850401 - 38850312
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattc 191  Q
    ||||||||| |||| |||||  | ||| || | ||||||| ||||||||||||| |||||| ||||||||||| || || ||||| ||||    
T  38850401 aacaacaactaagttttatcctactaagtggggtcggctacatggatcaaattacgtcatagtgttctatcataaaccaaatttgaattc 38850312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 54422893 - 54422954
Alignment:
Q  150 aaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatc 211  Q
    ||||||||||||| | |||||| || || ||||||||||| | ||||||| |||||||||||    
T  54422893 aaattatgtcatagttttctataataaaccatatttggatccaactcattgacctctaaatc 54422954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 30797824 - 30797896
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||| |||||  || ||| || | |||| || || |||||||||| ||||||||||||||||||    
T  30797824 aacaacaaccaagccttattccactaagtggggtcggttacatagatcaaattacgtcataatgttctatcat 30797896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 46148308 - 46148236
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||| |||  | || ||| || | ||||||| ||||||||||||| | ||||||||||||||||    
T  46148308 aacaacaaccaagccttgacccactaagtggggtcggctacatggatcaaattacgccataatgttctatcat 46148236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 9707050 - 9706927
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| ||| |||| ||||||||||  || ||||||||||| | |||||||||    
T  9707050 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcaaaaaccatatttggatccaactcattaa 9706951  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||| ||| |||||    
T  9706950 cctctaaatccttcctaacggttt 9706927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 21351839 - 21351962
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||| || ||||||||||||| ||| |||| ||||||| ||||||||| | | |||||| ||||||||||  |||||||||||||| |  |||||| |    
T  21351839 aacaacgacgaagtcttatctcactaactgaggtcggctacatggatcaattaacgtcatagtgttctatcaaaaatcatatttggatccagctcattga 21351938  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  21351939 cctctaaatcttttctaatggttt 21351962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 5096114 - 5096001
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||  |||||| || ||| || ||||||||| || |||||||||| | |||||||||||||||| || ||||||| ||| | |||||||||    
T  5096114 aacaacaaccaaaccttatcccactaagtgggatcggctacatagatcaaattacgccataatgttctatcataaaccatattttgatccaactcattaa 5096015  T
Q  202 cctctaaatctttc 215  Q
    || |||||||||||    
T  5096014 ccactaaatctttc 5096001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 34507 - 34630
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||||||||| || ||| || | || |||| ||||||||||||| | |||||||||||||||| || |||||||  || | |||||||||    
T  34507 aacaacaaccaagtcttatcccactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatatttcaatccaactcattaa 34606  T
Q  202 cctctaaatctttcataatggttt 225  Q
     || || ||||||| |||||||||    
T  34607 tctttagatctttcttaatggttt 34630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 6055774 - 6055896
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||| |||||||| |||||||||||| || | ||||||| ||| ||||||||| ||| ||||||||||| ||  |  ||||||||||   |||||||||    
T  6055774 aacaataaccaagtgttatctcattaaatg-gttcggctacatgcatcaaattacgtcgtaatgttctattatacactatatttggatctaactcattaa 6055872  T
Q  202 cctctaaatctttcataatggttt 225  Q
    ||||||||||||||||||| ||||    
T  6055873 cctctaaatctttcataatagttt 6055896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 30031535 - 30031427
Alignment:
Q  103 acaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaac 202  Q
    |||||||||||| |||||| || ||| |||| ||||||| ||||||||||||| | |||| ||||||||||| || |||||||  || | ||||||| ||    
T  30031535 acaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttaaatccaactcattgac 30031436  T
Q  203 ctctaaatc 211  Q
    |||||||||    
T  30031435 ctctaaatc 30031427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 608441 - 608318
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||||||||| || ||| |  | ||||||| ||||||||||| | |||||| | ||||||||  || ||||||||||| | ||||||| |    
T  608441 aacaacaaccaagtcttatcccactaagtagggtcggctacatggatcaaatgacgtcatagtattctatcaaaaaccatatttggatccaactcattga 608342  T
Q  202 cctctaaatctttcataatggttt 225  Q
     ||||||||||||  |||||||||    
T  608341 actctaaatcttttctaatggttt 608318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 12890855 - 12890732
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||||| | |||| ||||||||||| || |||||||||||   ||||||| |    
T  12890855 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatctaactcattga 12890756  T
Q  202 cctctaaatctttcataatggttt 225  Q
    | |||||||| ||  |||||||||    
T  12890755 cgtctaaatcctttctaatggttt 12890732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 32756201 - 32756078
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||| |||||||||| | || ||| || ||||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  32756201 aacaacatccaagtcttaccccactaagtgggatcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 32756102  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  32756101 cctctaaatcttttctaatggttt 32756078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 35043443 - 35043566
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||||| |||| || |||| |||| || |||||||| | |||||| ||||||||||  || ||||||||||| | || |||| |    
T  35043443 aacaacaaccaagccttatctctttaagtgggatcagctacattgatcaaatgacgtcatagtgttctatcaaaaaccatatttggatccaacacattga 35043542  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  35043543 cctctaaatcctttctaatggttt 35043566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 1615225 - 1615297
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    |||||||||||||||||||| || ||| |||| ||||||| ||||||||||| | |||||| |||||||||||    
T  1615225 aacaacaaccaagtcttatcccactaaatgaggtcggctacatggatcaaatgacgtcatagtgttctatcat 1615297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 3206461 - 3206573
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||| |||||||||||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||| |  || ||||||||||| | ||||||| |    
T  3206461 aacaataaccaagtcttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctattaaaaaccatatttggatccaactcattga 3206560  T
Q  202 cctctaaatcttt 214  Q
    |||||||||||||    
T  3206561 cctctaaatcttt 3206573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 9593712 - 9593833
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||  || ||| || | || ||||||||||||||||||   |||||||||||||||| || |||||| |||| | |||||||||    
T  9593712 aacaacaaccaagccttatgccactaagtgtggtcagctatatggatcaaattac--cataatgttctatcataaaccatattgggatccaactcattaa 9593809  T
Q  202 cctctaaatctttcataatggttt 225  Q
     |||||| |||||| |||| ||||    
T  9593810 tctctaagtctttcctaatagttt 9593833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 30679676 - 30679604
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    |||||||||||||||||||| |||||| || ||||||||| || |||||||| | || |||||||||||||||    
T  30679676 aacaacaaccaagtcttatcccattaagtgggatcggctacatagatcaaatgacgttataatgttctatcat 30679604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 12133904 - 12134003
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||| ||||| ||| || | ||||||| |||||||| |||||| ||||||||||||| || ||||| |||| ||| | |||||||||    
T  12133904 aacaacaaccaagccttttctcactaagtggggtcggctacatggatcagattatgccataatgttctattatgaatcacatttcgatccaactcattaa 12134003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 225
Target Start/End: Complemental strand, 24666047 - 24665968
Alignment:
Q  146 gatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    |||||||||| |||||||||||||||||| || ||||||| ||| | ||||||| |||||||||| |||| |||| ||||    
T  24666047 gatcaaattaagtcataatgttctatcataaaccatatttcgatccaactcattgacctctaaatatttcttaatagttt 24665968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 26292012 - 26291939
Alignment:
Q  147 atcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataat 220  Q
    |||||||||||| |||||||| |||||| || |||||||  |||| |||||| || ||||||||||||||||||    
T  26292012 atcaaattatgttataatgttatatcataaaccatatttttattcaactcatgaatctctaaatctttcataat 26291939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 34934832 - 34934941
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  34934832 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgaggccatagtgttctatcatacaccaaatttggatccaactcattga 34934931  T
Q  202 cctctaaatc 211  Q
    ||||||||||    
T  34934932 cctctaaatc 34934941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 33711154 - 33711222
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttcta 170  Q
    ||||||||||| ||||||||| ||||| || ||| | ||||||||||||||||| ||||| ||||||||    
T  33711154 aacaacaaccaggtcttatcttattaaatgggattgactatatggatcaaattacgtcatcatgttcta 33711222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 28085656 - 28085533
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| |   |||| |||||||||||  | || |||||||| | ||||||| |    
T  28085656 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgttctatcatacaccaaatttggatccaactcattga 28085557  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  28085556 cctctaaatcctttctaatggttt 28085533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 34143767 - 34143890
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||| ||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  34143767 aacaacaaccaagccttatcccaataagtggggtcgactacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 34143866  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  34143867 cctctaaatcctttgtaatggttt 34143890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 34156383 - 34156506
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||| ||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  34156383 aacaacaaccaagccttatcccaataagtggggtcgactacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 34156482  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  34156483 cctctaaatcctttgtaatggttt 34156506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 2307905 - 2307843
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataat 164  Q
    ||||||||| |||||||||  |||||| || |||||||||||| ||||||||||||| |||||    
T  2307905 aacaacaacaaagtcttattccattaagtgggatcggctatattgatcaaattatgttataat 2307843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 5632061 - 5631979
Alignment:
Q  143 atggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||||||||| | |||||| |||| |||||  || ||||||||||| | ||||||| ||||||||||||||  |||||||||    
T  5632061 atggatcaaatgacgtcatagtgttatatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt 5631979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 31818778 - 31818688
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||||| ||||||||||||| | |||||||||||||||| || |||| || ||| | ||||||||| ||| ||| ||||| |||| ||||    
T  31818778 tcggctacatggatcaaattacgacataatgttctatcataaaccatactttgatccaactcattaatctccaaacctttcctaatagttt 31818688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 214
Target Start/End: Complemental strand, 5897737 - 5897625
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||| |||| |||||| || ||| || |||| |||| ||||||||||||| |||||||| ||||| |||  | ||||||| ||| | || ||||||    
T  5897737 aacaacaatcaagccttatcccactaagtgggatccgctacatggatcaaattacgtcataatattctaccatataccatattttgatccaacacattaa 5897638  T
Q  202 cctctaaatcttt 214  Q
      |||||||||||    
T  5897637 tatctaaatcttt 5897625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 9568944 - 9568872
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaa 209  Q
    ||||||||||||||||||| | ||||| | |||||||| || ||||||||||| | ||||| ||| |||||||    
T  9568944 ggctatatggatcaaattacgccataacggtctatcataaaccatatttggatccaactcaataatctctaaa 9568872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 30789075 - 30789147
Alignment:
Q  101 gaacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatca 173  Q
    |||||||||||||| |||||| || ||| |  ||||||||| ||||||||||| | |||||| ||||||||||    
T  30789075 gaacaacaaccaagccttatcccactaagtaggatcggctacatggatcaaatgacgtcatagtgttctatca 30789147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 5081079 - 5081012
Alignment:
Q  143 atggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaat 210  Q
    ||||||||||| | || ||| ||||||||||| ||||||||||| || | ||||||| ||||||||||    
T  5081079 atggatcaaatgacgttatagtgttctatcataaatcatatttgtatccaactcattgacctctaaat 5081012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 33497201 - 33497130
Alignment:
Q  140 tatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatc 211  Q
    |||||||||||||||| |  ||| |||| |||||| |||||||||||||| | ||||||| |||| ||||||    
T  33497201 tatatggatcaaattacgctatagtgttatatcataaatcatatttggatccaactcattgacctttaaatc 33497130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 225
Target Start/End: Original strand, 34560417 - 34560496
Alignment:
Q  146 gatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||||||||| | ||||| ||||||||| |||||||||| ||||| || || ||| |||| |||| |||||||| ||||    
T  34560417 gatcaaattatataataatcttctatcataaatcatatttagattcaacacactaatctctgaatcattcataatagttt 34560496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 7492611 - 7492550
Alignment:
Q  160 ataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatg 221  Q
    |||||||||||||   || |||||||||||   ||||||||||||||||||||||| |||||    
T  7492611 ataatgttctatccgaaaccatatttggataaaactcattaacctctaaatctttcctaatg 7492550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 28026896 - 28026953
Alignment:
Q  169 tatcatcaatcatatttggattctactcattaacctctaaatctttcataatggtttt 226  Q
    |||||| || |||||||| || | | |||||||||| |||||||||||||||||||||    
T  28026896 tatcataaaccatatttgaatacaaatcattaacctgtaaatctttcataatggtttt 28026953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 586130 - 586058
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    |||||||| ||||  ||||| |||||| |||| ||||||  ||| ||||||| | ||||||||||||||||||    
T  586130 aacaacaatcaaggtttatcccattaagtgaggtcggctccatgaatcaaatgacgtcataatgttctatcat 586058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 4245877 - 4245945
Alignment:
Q  105 aacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatca 173  Q
    |||||||||| |||||| || ||| || | |||||||  |||||||||  |||||||||||||||||||    
T  4245877 aacaaccaagccttatcccactaagtggggtcggctacttggatcaaacgatgtcataatgttctatca 4245945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 14389204 - 14389276
Alignment:
Q  143 atggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttc 215  Q
    ||||||||||||| | | ||||||| |||||| || |||||||||||   ||| ||||| |||||||||||||    
T  14389204 atggatcaaattacgccctaatgttatatcataaaccatatttggatctaacttattaatctctaaatctttc 14389276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 28162 - 28039
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||| ||||||||||||||| | ||| || | || |||| ||| ||||||||||| |||| ||||||||||  |||||||||||||| | ||| |||||    
T  28162 aacaaaaaccaagtcttatctaactaaatggggtcagctacatgtatcaaattatgccatagtgttctatcagaaatcatatttggatccaacttattaa 28063  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||| |||| ||||    
T  28062 cctctaaatctttcctaatagttt 28039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 106 - 209
Target Start/End: Complemental strand, 5558417 - 5558314
Alignment:
Q  106 acaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctc 205  Q
    ||||||||| |||||| || ||| || | ||||||| ||||||||||||||| |||| ||||||||||| || ||||||||||| ||||||||| |||||    
T  5558417 acaaccaagccttatcccactaagtggggtcggctacatggatcaaattatgccatagtgttctatcataaaccatatttggatcctactcattgacctc 5558318  T
Q  206 taaa 209  Q
    ||||    
T  5558317 taaa 5558314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 101 - 225
Target Start/End: Complemental strand, 14911453 - 14911329
Alignment:
Q  101 gaacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcatta 200  Q
    |||||||||||||  |||||  |||||| || | ||||||| ||||||||||| | | |||| | ||||||||  |||||||||||||| | ||||||||    
T  14911453 gaacaacaaccaaaccttattccattaagtggggtcggctacatggatcaaatgacgccatagtattctatcaaaaatcatatttggatccaactcatta 14911354  T
Q  201 acctctaaatctttcataatggttt 225  Q
    ||||||||||||||  |||||||||    
T  14911353 acctctaaatcttttctaatggttt 14911329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 3302124 - 3302001
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | | || ||||||||||  || ||||||||||| | ||||||| |    
T  3302124 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccgtagtgttctatcaaaaaccatatttggatccaactcattga 3302025  T
Q  202 cctctaaatctttcataatggttt 225  Q
    ||||||||||||| ||||||||||    
T  3302024 cctctaaatcttttataatggttt 3302001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 189
Target Start/End: Complemental strand, 18855887 - 18855800
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggat 189  Q
    |||||||||||||||||||| || ||| || | ||||||| |||||||||||||||  ||||||||||||||| || |||||||||||    
T  18855887 aacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaattatgctataatgttctatcataaaccatatttggat 18855800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 418069 - 418149
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttc 215  Q
    ||||||| ||||||||||||| | |||||||||||||||| || || |||||||| | ||||||||| |||||||||||||    
T  418069 tcggctacatggatcaaattacgccataatgttctatcataaaccacatttggatccaactcattaatctctaaatctttc 418149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 1275544 - 1275421
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||| | | |||||| || ||| || | ||||||| ||||||||||| | |||||||||||||||||   | || |||||||||| ||| |||||    
T  1275544 aacaacaactatgccttatcccactaagtggggtcggctacatggatcaaatgacgtcataatgttctatcaaacaccaaatttggattcaactgattaa 1275445  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| || ||||||||||    
T  1275444 cctctaaatcctttataatggttt 1275421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 4496664 - 4496541
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| ||| |||| |||||||||||  | || |||||||| | ||||||| |    
T  4496664 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcatacaccaaatttggatccaactcattga 4496565  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  4496564 cctctaaatcctttctaatggttt 4496541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 9235294 - 9235204
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||||| ||||||||||||||| |||||||||||||||| || ||||||| ||| |  |||||||| ||||| ||||||| |||| ||||    
T  9235294 tcggctacatggatcaaattatgccataatgttctatcataaaccatatttcgatccagctcattaatctctatatctttcttaatagttt 9235204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 38685242 - 38685124
Alignment:
Q  107 caaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctct 206  Q
    |||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| ||||||||||| || ||||||||||| | ||||||| ||||||    
T  38685242 caaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatattgttctatcataaaccatatttggatccaactcattgacctct 38685143  T
Q  207 aaatctttcataatggttt 225  Q
    ||||| ||  |||||||||    
T  38685142 aaatcctttctaatggttt 38685124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 215
Target Start/End: Complemental strand, 14668047 - 14667938
Alignment:
Q  106 acaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctc 205  Q
    |||||||||||||||| || ||| || | |||| || |||||||||||||   |||||||||||||||| || |||| |||||| | ||||||||| |||    
T  14668047 acaaccaagtcttatcccactaagtggggtcggttacatggatcaaattacaccataatgttctatcataaaccatacttggatccaactcattaatctc 14667948  T
Q  206 taaatctttc 215  Q
    || |||||||    
T  14667947 tagatctttc 14667938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 26884691 - 26884816
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcata-tttggattctactcatta 200  Q
    |||||||| |||| |||||  || ||| || | ||||||| ||||||||||||  ||| || ||||||||||| ||||||| ||||||| | || |||||    
T  26884691 aacaacaatcaagccttattccactaagtggggtcggctacatggatcaaattgcgtcgtagtgttctatcataaatcatattttggatccgacccatta 26884790  T
Q  201 acctctaaatctttcataatggtttt 226  Q
    ||||||||||||||| |||| |||||    
T  26884791 acctctaaatctttcctaatagtttt 26884816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 13561388 - 13561511
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||| |||| |||||| || ||| || | ||||||| ||||||||||| | | |||| ||||||||||  || |||| |||||| | ||||||| |    
T  13561388 aacaacaaacaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatagttggatccaactcattga 13561487  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  13561488 cctctaaatcttttctaatggttt 13561511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 20457053 - 20456930
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||| |||| |||||| || ||| || | ||||||| ||||||||||| | | ||||||||||||||||  |||| |||| ||||| ||| ||| |    
T  20457053 aacaacaatcaagccttatcccactaagtggggtcggctacatggatcaaatgacgccataatgttctatcatacatcaaatttagattcaacttattga 20456954  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  20456953 cctctaaatcctttctaatggttt 20456930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 28976861 - 28976984
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||| ||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  28976861 aacaacaaccaagccttatcccactaagtggggtcggctacatgaatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 28976960  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| || ||||||||||    
T  28976961 cctctaaatcctttataatggttt 28976984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 29816662 - 29816539
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  29816662 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 29816563  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  29816562 cctctaaatcctttctaatggttt 29816539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 32516831 - 32516725
Alignment:
Q  105 aacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacct 204  Q
    |||| |||||| |||||||||||| || |||||| ||||| |||||||||| |||||||| ||||||||| || |||||||| || | |||  |||| ||    
T  32516831 aacatccaagttttatctcattaagtg-gatcggttatatcgatcaaattacgtcataatattctatcataaaccatatttgaatccaacttgttaatct 32516733  T
Q  205 ctaaatct 212  Q
    ||||||||    
T  32516732 ctaaatct 32516725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 34273293 - 34273170
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||| ||| ||||||||| ||| |||| | ||||| ||||||| ||| | |||||| |||||||||||  | || |||||||| | ||||||| |    
T  34273293 aacaacaactaagccttatctcactaagtgaggttggctacatggatcgaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattga 34273194  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  34273193 cctctaaatcctttctaatggttt 34273170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 20367138 - 20367068
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctcta 207  Q
    ||||||||||||||||||| ||||||||||| | |||| || ||||||||||| | ||||||||| |||||    
T  20367138 ggctatatggatcaaattacgtcataatgttatgtcataaaccatatttggatccaactcattaatctcta 20367068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 17340468 - 17340556
Alignment:
Q  132 agatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataat 220  Q
    ||||||| || ||| |||||| ||||  |||||||| |||||| || |||||||||||   ||||||||||||||||||||||| ||||    
T  17340468 agatcggttaaatgaatcaaagtatgcaataatgttatatcataaaccatatttggatcaaactcattaacctctaaatctttcttaat 17340556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 43557835 - 43557947
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||| | |||||| || ||| || | ||||||| || |||||| ||| |||||||||||||||||| || ||||||| ||| | ||||| |||    
T  43557835 aacaacaaccaggccttatcccactaagtggggtcggctacatagatcaacttaagtcataatgttctatcataaaccatatttcgatccaactcaataa 43557934  T
Q  202 cctctaaatcttt 214  Q
     ||| ||||||||    
T  43557935 tctccaaatcttt 43557947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 2915498 - 2915620
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||| ||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| ||||||||||| || || |||||||| | ||||||| |    
T  2915498 aacaataaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcat-aaccaaatttggatccaactcattga 2915596  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  2915597 cctctaaatcctttctaatggttt 2915620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 10639582 - 10639459
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| ||  || || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  10639582 aacaacaaccaagccttatcccacaaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 10639483  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  10639482 cctctaaatcctttctaatggttt 10639459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 12492386 - 12492509
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||| ||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  12492386 aacaacaaccaagccttatcccactaagtggggtcggctacatgcatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 12492485  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  12492486 cctctaaatcctttctaatggttt 12492509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 24178790 - 24178667
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||||| ||||||| || | ||||||| || |||||||| ||| |||| |||||||||||  |  | |||||||| | ||||||| |    
T  24178790 aacaacaaccaagccttatttcattaagtggggtcggctacatagatcaaatgatgccatagtgttctatcatacactaaatttggatccaactcattga 24178691  T
Q  202 cctctaaatctttcataatggttt 225  Q
     ||||||||| ||  |||||||||    
T  24178690 actctaaatcctttctaatggttt 24178667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 36215768 - 36215645
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||| ||||||||||||  ||| ||   || ||| ||||||| |  ||||| ||||||||||| | |||| ||||||||| | | ||| |    
T  36215768 aacaacaaccaagttttatctcattaagcgaggtccattacatgaatcaaatcacatcatagtgttctatcataagtcatgtttggattcaattaattga 36215669  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  36215668 cctctaaatcttttttaatggttt 36215645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 36551426 - 36551320
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||||||||| ||| || | ||||||| ||||||||||||||  | ||||| ||||  |  || ||||||||||| | |||||||||    
T  36551426 aacaacaaccaagccttatctcactaagtggggtcggctacatggatcaaattataccgtaatgatctaatacaaaccatatttggatgcaactcattaa 36551327  T
Q  202 cctctaa 208  Q
     ||||||    
T  36551326 tctctaa 36551320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 38501422 - 38501528
Alignment:
Q  104 caacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacc 203  Q
    |||||||||||||||||| || ||| || ||||||||| || ||||| ||||    ||| | ||||||||| |||||||||||||| | ||| ||| |||    
T  38501422 caacaaccaagtcttatcccactaagtgggatcggctacatcgatcatattacactatagttttctatcataaatcatatttggatccaacttattgacc 38501521  T
Q  204 tctaaat 210  Q
    |||||||    
T  38501522 tctaaat 38501528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 42504293 - 42504358
Alignment:
Q  146 gatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatc 211  Q
    |||||||||| |||||||||||||||||| || |||||||||||   ||||||| || ||||||||    
T  42504293 gatcaaattacgtcataatgttctatcataaaccatatttggatataactcattgacatctaaatc 42504358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 14665992 - 14665871
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| || |||||||||| | || |  |||||||||| || ||||||||||| | ||||||| |    
T  14665992 aacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaattacgccaga--gttctatcataaaccatatttggatccaactcattga 14665895  T
Q  202 cctctaaatctttcataatggttt 225  Q
    | |||||||  ||| |||||||||    
T  14665894 cttctaaattcttcctaatggttt 14665871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 16913884 - 16914008
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgaga-tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcatta 200  Q
    ||||||||||||| |||||| || ||| || |  ||||||| ||||||||||| | | |||  ||||||||| | || ||||||||||| | |||||||     
T  16913884 aacaacaaccaagccttatcccactaagtgggggtcggctacatggatcaaatgacgccatggtgttctatcgtaaaccatatttggatccaactcattg 16913983  T
Q  201 acctctaaatctttcataatggttt 225  Q
    ||||||||||| ||  |||||||||    
T  16913984 acctctaaatcctttctaatggttt 16914008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 214
Target Start/End: Complemental strand, 31220662 - 31220551
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||  ||||||||||||| |  ||||| ||||||||||||||| |  |||||||  |||||||  |||||||||| ||| | ||||||| |    
T  31220662 aacaacaaccaaaccttatctcattaaataggatcgactatatggatcaaatgacatcataat-atctatcaaaaatcatatttagatccaactcattga 31220564  T
Q  202 cctctaaatcttt 214  Q
     ||| ||||||||    
T  31220563 tctcaaaatcttt 31220551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 36200961 - 36200885
Alignment:
Q  150 aaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggtttt 226  Q
    |||||| ||||||| |||  ||||| || ||||||||||| | ||||||||||||||| |||||| ||||| |||||    
T  36200961 aaattacgtcataaagtttgatcatgaaccatatttggatccaactcattaacctctatatcttttataatagtttt 36200885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 38132616 - 38132544
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||| |||||| || ||| || | ||||| | ||||||||||||| | ||||||||||||||||    
T  38132616 aacaacaaccaagccttatcccactaagtggggtcggccacatggatcaaattacgccataatgttctatcat 38132544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 225
Target Start/End: Complemental strand, 14725754 - 14725675
Alignment:
Q  146 gatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    |||| ||||||||| || ||||| ||||| || ||||||| ||| | |||||||||||| ||||||||| ||||| ||||    
T  14725754 gatcgaattatgtcgtattgttcgatcataaaccatattttgatccaactcattaacctttaaatcttttataatagttt 14725675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 35615530 - 35615455
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaat 210  Q
    ||||||||||| ||||| ||| |||||||||||||||||| ||  ||||||  || | ||||||||| ||||||||    
T  35615530 tcggctatatgaatcaagttaggtcataatgttctatcataaactatatttttatccaactcattaatctctaaat 35615455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 43475519 - 43475396
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| |||||| ||   | |||||  ||||||||||||   ||||| |||||| ||| |||||||||| ||| | |||||||||    
T  43475519 aacaacaaccaagccttatcccattaagtggagttggctacgtggatcaaattacaccataacgttctaccataaatcatatttcgatccaactcattaa 43475420  T
Q  202 cctctaaatctttcataatggttt 225  Q
     ||||  ||||||| |||| ||||    
T  43475419 tctctggatctttcttaatagttt 43475396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 2090693 - 2090575
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||| ||| |||||| || | | || | |||| || ||||||||||||| | |||||||||  ||||| ||  ||||||||||    ||||||||    
T  2090693 aacaacaacaaagccttatcccactcaatggggtcgggtacatggatcaaattacgccataatgttggatcataaactatatttggatcaagctcattaa 2090594  T
Q  202 cctctaaatctttcataat 220  Q
    |||||||||||||| ||||    
T  2090593 cctctaaatctttcctaat 2090575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 29922564 - 29922494
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatc 172  Q
    ||||||||||||| |||||| ||  || |||| | ||||| ||||||||||||| | ||||||||||||||    
T  29922564 aacaacaaccaaggcttatcccaccaagtgaggttggctacatggatcaaattacgccataatgttctatc 29922494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 201
Target Start/End: Original strand, 32442160 - 32442226
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||| ||||||||||||| | ||||||||||||||   || ||||||||||| | |||||||||    
T  32442160 tcggctacatggatcaaattacgccataatgttctatccaaaaccatatttggatccaactcattaa 32442226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 185
Target Start/End: Complemental strand, 41808197 - 41808119
Alignment:
Q  107 caaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatattt 185  Q
    |||||||||| ||||  | ||| | |||||| ||| ||||||||||  ||||||||||||||||||||  |||||||||    
T  41808197 caaccaagtcctatcctactaagtcagatcgactacatggatcaaacgatgtcataatgttctatcatacatcatattt 41808119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 7359263 - 7359328
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgtt 167  Q
    ||||||||||||||||| || || ||| || | || |||| ||||||||||||| |||||||||||    
T  7359263 aacaacaaccaagtcttgtcccactaagtggggtcagctacatggatcaaattacgtcataatgtt 7359328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 7678757 - 7678645
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||| ||||| || ||| || | ||||||| |||||||||| ||  |||||||||| ||| || || | ||||| ||| | |||||||||    
T  7678757 aacaacaaccaagttttatcccactaagtggggtcggctacatggatcaaactacctcataatgtt-tattataaaccgtatttcgatccaactcattaa 7678659  T
Q  202 cctctaaatctttc 215  Q
     ||||| |||||||    
T  7678658 tctctagatctttc 7678645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 4653532 - 4653476
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgt 158  Q
    ||||||||||||||||||||||| ||| || | |||| || ||| ||||||||||||    
T  4653532 aacaacaaccaagtcttatctcactaagtggggtcggatacatgaatcaaattatgt 4653476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 225
Target Start/End: Complemental strand, 6889250 - 6889150
Alignment:
Q  125 ttaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggtt 224  Q
    |||| |||| || |||| |||||| |||||| | |||||||||||||||| || ||||||| |   | ||| ||||| ||||||||||||| |||| |||    
T  6889250 ttaaatgagttcagctacatggattaaattacgccataatgttctatcataaaccatattttggcccaactaattaatctctaaatctttcctaatagtt 6889151  T
Q  225 t 225  Q
    |    
T  6889150 t 6889150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 9234166 - 9234102
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgt 166  Q
    |||||||| |||| |||||| || ||| || | |||| || ||||||||||||||||||||||||    
T  9234166 aacaacaatcaagccttatcccactaagtggggtcggttacatggatcaaattatgtcataatgt 9234102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 11069200 - 11069236
Alignment:
Q  138 gctatatggatcaaattatgtcataatgttctatcat 174  Q
    |||||||||||||||||| | ||||||||||||||||    
T  11069200 gctatatggatcaaattacgccataatgttctatcat 11069236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 11675810 - 11675686
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatattt-ggattctactcatta 200  Q
    ||||||||||||| ||||||  | ||| || | ||||||| |||||| ||| || | |||||||||||||||| || |||||||   || | ||||||||    
T  11675810 aacaacaaccaagccttatccaactaagtggggtcggctacatggattaaactacgccataatgttctatcataaaccatatttaaaatccaactcatta 11675711  T
Q  201 acctctaaatctttcataatggttt 225  Q
    | |||||||||| || |||| ||||    
T  11675710 atctctaaatctgtcctaatagttt 11675686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 30588694 - 30588614
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttc 215  Q
    ||||||| |||||||| || | ||||||||||||||| || || ||||||| ||| | ||||||| | ||||| |||||||    
T  30588694 tcggctacatggatcatatcacgtcataatgttctattataaaccatatttcgatccaactcattcatctctagatctttc 30588614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 42576290 - 42576218
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||| |||||| || ||| |  | ||||||| ||||||||||||| | ||| ||||||||||||    
T  42576290 aacaacaaccaagccttatcccactaagtcgggtcggctacatggatcaaattacgccattatgttctatcat 42576218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 220
Target Start/End: Original strand, 43375600 - 43375718
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||   ||||| || ||| || ||| ||||| |||||||||||||||||||||||||||||||| || ||||||| | | | |||||||||    
T  43375600 aacaacaaccaatctttatcccactaagtgggattggctacatggatcaaattatgtcataatgttctatcatgaaccatatttcggtccaactcattaa 43375699  T
Q  202 cctctaaatctttcataat 220  Q
     ||||||||||||| ||||    
T  43375700 tctctaaatctttcttaat 43375718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 210
Target Start/End: Complemental strand, 41560509 - 41560401
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||||| | |||||||||||||||| |  ||||||||||| | |||||||||    
T  41560509 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataacccatatttggatccaactcattaa 41560410  T
Q  202 cctctaaat 210  Q
     ||||||||    
T  41560409 tctctaaat 41560401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 25979233 - 25979356
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| ||||||||||| || ||||||||||| | ||||||| |    
T  25979233 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcattga 25979332  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  25979333 cctctaaatcctttctaatggttt 25979356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 28090696 - 28090783
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggat 189  Q
    |||||||||||||||||||| || ||| || | ||||||| ||||||||||||| | |||||||||||||||| || |||||||||||    
T  28090696 aacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttggat 28090783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 5338993 - 5338880
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||| || ||||||||| ||| |||| | ||||| ||||||||||||| | ||||||||||||| || ||||| |||| ||| | |||||||||    
T  5338993 aacaacaaccgagccttatctcactaagtgaggttggctacatggatcaaattacgccataatgttctataataaatcacatttcgatccaactcattaa 5338894  T
Q  202 cctctaaatctttc 215  Q
     ||||| |||||||    
T  5338893 tctctagatctttc 5338880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 15086202 - 15086093
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | | ||||| ||||||||||| | |||||| ||||||||||  |||||||||||||| | ||||||| |    
T  15086202 aacaacaaccaagccttatcccactaagtggggttggctacatggatcaaatgacgtcatagtgttctatcaaaaatcatatttggatccaactcattga 15086103  T
Q  202 cctctaaatc 211  Q
    ||||||||||    
T  15086102 cctctaaatc 15086093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 215
Target Start/End: Original strand, 52561591 - 52561704
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||||  | |||||||||||| |   || ||||||||||| | |||||||||    
T  52561591 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatttcgccataatgttctacccgaaaccatatttggatccaactcattaa 52561690  T
Q  202 cctctaaatctttc 215  Q
    ||||||||||||||    
T  52561691 cctctaaatctttc 52561704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 214
Target Start/End: Original strand, 10200308 - 10200420
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||  ||||| |||||| |||| ||||||| |||||||||||||   ||| |||||||||||| || ||||||||||| | ||||||  |    
T  10200308 aacaacaaccaagcattatcccattaagtgaggtcggctacatggatcaaattacaccatgatgttctatcataaaccatatttggatccaactcatcga 10200407  T
Q  202 cctctaaatcttt 214  Q
     ||||||||||||    
T  10200408 tctctaaatcttt 10200420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 19936740 - 19936616
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||| ||||||||||| || |||  |   ||||||| ||||||||||||| | | |||||||||||||| || |||||||||||   |||||||||    
T  19936740 aacaacaatcaagtcttatcccactaagcggagtcggctacatggatcaaattacgccgtaatgttctatcattaaccatatttggatctaactcattaa 19936641  T
Q  202 cctctaaatctttcataatggtttt 226  Q
    | |||||||||||| |||| |||||    
T  19936640 catctaaatctttcctaatagtttt 19936616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 206
Target Start/End: Original strand, 25715328 - 25715432
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| |||| ||||||| ||||||||||||| | |||||| ||||||||| || ||||||| | ||| |||||||||    
T  25715328 aacaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaattacgccataatattctatcataaaccatatttcggttcaactcattaa 25715427  T
Q  202 cctct 206  Q
     ||||    
T  25715428 tctct 25715432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 4001457 - 4001580
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||| || || ||| || | | ||||| ||||||||||| ||||||||  |||||||||  || ||||||||||| | ||||||| |    
T  4001457 aacaacaaccaagccttttcccactaagtggggttggctacatggatcaaatgatgtcatagggttctatcaaaaaccatatttggatccaactcattga 4001556  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  4001557 cctctaaatcttttttaatggttt 4001580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 4415629 - 4415506
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||||||| |  || ||| ||   ||||||| ||||||||||| ||| ||||||||||||| |  |||||||||| ||| | ||||||| |    
T  4415629 aacaacaaccaagtctttttccactaaatggagtcggctacatggatcaaatgatgccataatgttctataaaaaatcatatttagatccaactcattga 4415530  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  4415529 cctctaaatcttttctaatggttt 4415506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 34792351 - 34792474
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| |||||| || | ||||||| ||||||||||| | | |||| ||||||||||| || || |||||||| | ||||||| |    
T  34792351 aacaacaaccaagccttatcccattaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcattga 34792450  T
Q  202 cctctaaatctttcataatggttt 225  Q
    ||| |||||| ||  |||||||||    
T  34792451 cctttaaatcctttctaatggttt 34792474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 37311757 - 37311880
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||| || || ||| || | ||||||| ||||||||||| | | |||| ||||||||||  || ||||||||||| | ||||||| |    
T  37311757 aacaacaaccaagccttttcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattga 37311856  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  37311857 cctctaaatcttttctaatggttt 37311880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 38807673 - 38807796
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||| ||||||| | |||| ||||||||||| || ||||||||||| | |||| || |    
T  38807673 aacaacaaccaagccttatcccactaagtggggtcggctacatggaacaaattacgccatagtgttctatcataaaccatatttggatccaactcgttga 38807772  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  38807773 cctctaaatcctttctaatggttt 38807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 225
Target Start/End: Complemental strand, 39318376 - 39318286
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||||| ||||||||||||| | |||| ||||||||||| || ||||||||||| | ||||||| ||||||||||| ||  |||||||||    
T  39318376 tcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggttt 39318286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 4707223 - 4707331
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||| ||||||||| | |||| ||||||||||| || || |||||||| | |||||||||    
T  4707223 aacaacaaccaagccttatcccactaagtggggtcggctacatg-atcaaattacgccatagtgttctatcataaaccaaatttggatccaactcattaa 4707321  T
Q  202 cctctaaatc 211  Q
    ||||||||||    
T  4707322 cctctaaatc 4707331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 37462878 - 37462986
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||||| | ||||||||||||| || || ||||||| |||   |||||||||    
T  37462878 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatgataaaccatattt-gatcaaactcattaa 37462976  T
Q  202 cctctaaatc 211  Q
    ||||||||||    
T  37462977 cctctaaatc 37462986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 52739547 - 52739636
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatc-atcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||| ||| ||||||||| |||||||||||||||| || ||| |||||||||||| ||||||||||||  ||||||||| |||| ||||    
T  52739547 ggctacatgaatcaaattaagtcataatgttctatccataaattatatttggattcaactcattaacctaaaaatctttcctaatagttt 52739636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 29129064 - 29128940
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatgg-atcaaattatgtcataatgttctatcatcaatcatatttggattctactcatta 200  Q
    ||||| ||||||| ||||||||| ||| || | ||||||| |||| |||| ||||   |||||||||||||||| || ||||||||||| | |||  |||    
T  29129064 aacaaaaaccaagccttatctcactaagtggggtcggctacatgggatcatattacaccataatgttctatcataaaccatatttggatccaacttgtta 29128965  T
Q  201 acctctaaatctttcataatggttt 225  Q
    ||||||||||||||| |||| ||||    
T  29128964 acctctaaatctttcctaatagttt 29128940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 1211025 - 1210902
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  1211025 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 1210926  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  1210925 cctctaaatcctttctaatggttt 1210902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 12930356 - 12930431
Alignment:
Q  145 ggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataat 220  Q
    ||||||||||| |||||||| ||||||||| |||||||||||||| | ||||| ||| || ||||| |||||||||    
T  12930356 ggatcaaattacgtcataatcttctatcataaatcatatttggatccaactcactaatctttaaatttttcataat 12930431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 22090376 - 22090253
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || | | || | ||||||| ||||||||||| | |||||| |||||||||||  | || |||||||| | ||||||| |    
T  22090376 aacaacaaccaagccttatcccacttagtggggtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattga 22090277  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  22090276 cctctaaatcctttctaatggttt 22090253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 123 - 210
Target Start/End: Original strand, 27520230 - 27520317
Alignment:
Q  123 cattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaat 210  Q
    |||||| |||| ||| ||| ||| |||||||||  ||||||||||||||||| |||||||||||||| |  |||||||| ||||||||    
T  27520230 cattaagtgaggtcgactacatgaatcaaattacatcataatgttctatcataaatcatatttggatccagctcattaatctctaaat 27520317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 30202132 - 30202255
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  30202132 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 30202231  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  30202232 cctctaaatcctttctaatggttt 30202255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 32404529 - 32404651
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||| | |||||| || ||| || | ||||||| ||||||||||||| | ||| ||||| |||||| || ||| ||||||||  |||||||||    
T  32404529 aacaacaacca-gccttatcccactaagtggggtcggctacatggatcaaattacgccattatgttatatcataaaccatgtttggatttaactcattaa 32404627  T
Q  202 cctctaaatctttcataatggttt 225  Q
     ||||||||||||| |||| ||||    
T  32404628 tctctaaatctttcctaatagttt 32404651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 49347395 - 49347518
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  49347395 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 49347494  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  49347495 cctctaaatcctttctaatggttt 49347518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 52921360 - 52921237
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | |  ||| ||||||||||| || ||||||||||| | | ||||| |    
T  52921360 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgcaatagtgttctatcataaaccatatttggatccaattcattga 52921261  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  52921260 cctctaaatcctttctaatggttt 52921237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 225
Target Start/End: Complemental strand, 39140794 - 39140672
Alignment:
Q  103 acaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaac 202  Q
    ||||||||||||  ||||| || ||| || | ||||||| ||| ||||||||| | ||||||||||||||   || ||||||||||| | ||| ||||||    
T  39140794 acaacaaccaagcattatcccactaagtggggtcggctacatgaatcaaattacgccataatgttctatctgaaaccatatttggatccaactaattaac 39140695  T
Q  203 ctctaaatctttcataatggttt 225  Q
    |||||||| |||| |||| ||||    
T  39140694 ctctaaatttttcctaatagttt 39140672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 225
Target Start/End: Original strand, 52532619 - 52532741
Alignment:
Q  103 acaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaac 202  Q
    |||||||||||| ||| || || ||| || | ||||||| ||| ||||||||| | |||||||||||||||| || ||||||| | | | |||||||||     
T  52532619 acaacaaccaagccttttcccactaagtggggtcggctacatgaatcaaattacgccataatgttctatcataaaccatattttgttccaactcattaat 52532718  T
Q  203 ctctaaatctttcataatggttt 225  Q
     |||||||||||| |||| ||||    
T  52532719 ttctaaatctttcctaatagttt 52532741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 220
Target Start/End: Original strand, 16272864 - 16272941
Alignment:
Q  143 atggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataat 220  Q
    |||||||||| ||||||||| ||||||||||| || |||| || ||| ||||||||||| || ||||| |||||||||    
T  16272864 atggatcaaaatatgtcatattgttctatcataaaccataattagatactactcattaatctataaatatttcataat 16272941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 37430422 - 37430487
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgtt 167  Q
    ||||||||||||| ||||||||| ||| || |||||||||||||||||||| || | |||||||||    
T  37430422 aacaacaaccaagccttatctcactaagtgggatcggctatatggatcaaactacgccataatgtt 37430487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 28533747 - 28533675
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    |||||||||||||||||||| || ||| || | ||||||| ||||||||||| | |||||| |||||||||||    
T  28533747 aacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcat 28533675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 52878359 - 52878419
Alignment:
Q  160 ataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataat 220  Q
    |||| |||||||||| |||| || |||||||| |||||||||||||||||||||| |||||    
T  52878359 ataaagttctatcataaatcgtagttggattcaactcattaacctctaaatcttttataat 52878419  T

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Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 3818858 - 3818981
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||| |||||| |||||| || ||| ||   ||||||| |||||||||||   | |||||||||| ||||| || |||||||  |||| |||||||||    
T  3818858 aacaacgaccaagccttatcccactaagtgcagtcggctacatggatcaaatggcgacataatgttccatcataaaccatatttctattcaactcattaa 3818957  T
Q  202 cctctaaatctttcataatggttt 225  Q
     ||||||||||||| |||| ||||    
T  3818958 tctctaaatctttcttaatagttt 3818981  T

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Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 8796489 - 8796406
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatattt 185  Q
    ||||||||||||| |||||| || ||| || | ||||||| |||||| |||||| | |||||||||||||||| || |||||||    
T  8796489 aacaacaaccaagccttatcccactaagtggggtcggctacatggattaaattacgccataatgttctatcataaaccatattt 8796406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 11331215 - 11331318
Alignment:
Q  111 caagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaat 210  Q
    ||||| |||||| | ||| |||||||| || ||||||||||||||  ||||||||||  ||||| || |||||||  || | ||| ||||||||||||||    
T  11331215 caagttttatctgagtaaatgagatcgactttatggatcaaattacatcataatgtttcatcataaaccatatttaaatccaacttattaacctctaaat 11331314  T
Q  211 cttt 214  Q
    ||||    
T  11331315 cttt 11331318  T

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Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 11489236 - 11489339
Alignment:
Q  111 caagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaat 210  Q
    ||||| |||||| | ||| |||||||| || ||||||||||||||  ||||||||||  ||||| || |||||||  || | ||| ||||||||||||||    
T  11489236 caagttttatctgagtaaatgagatcgactttatggatcaaattacatcataatgtttcatcataaaccatatttaaatccaacttattaacctctaaat 11489335  T
Q  211 cttt 214  Q
    ||||    
T  11489336 cttt 11489339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 21769713 - 21769784
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatca 173  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||||| | |||||||||||||||    
T  21769713 aacaacaaccaagccttatcacactaagtggggtcggctacatggatcaaattacgccataatgttctatca 21769784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 27847809 - 27847912
Alignment:
Q  109 accaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaa 208  Q
    |||||| |||||| || ||| |||||||||||| |||||| |||||| | |||||||||| ||||| || |||||||  |    ||||||||||||||||    
T  27847809 accaagccttatcccactaagtgagatcggctacatggataaaattacggcataatgttccatcataaaccatatttcaaccaaactcattaacctctaa 27847908  T
Q  209 atct 212  Q
    ||||    
T  27847909 atct 27847912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 189
Target Start/End: Original strand, 44941778 - 44941865
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggat 189  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||||| | |||| ||||||||||| || || ||||||||    
T  44941778 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccaaatttggat 44941865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 52832288 - 52832213
Alignment:
Q  139 ctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatcttt 214  Q
    ||||||||||||||||| ||||||||||||||||   ||  ||||||| |||| ||| || |||||||||||||||    
T  52832288 ctatatggatcaaattacgtcataatgttctatctgaaacaatatttgtattcaacttatcaacctctaaatcttt 52832213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 207
Target Start/End: Complemental strand, 6084252 - 6084150
Alignment:
Q  105 aacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacct 204  Q
    |||||||||| |||||| || ||| |||||||   || ||||||||||||| | |||| ||||||||||| || ||||||| ||| | ||||||||| ||    
T  6084252 aacaaccaagccttatcccactaagtgagatcaaatacatggatcaaattacgccatattgttctatcataaaccatattttgatccaactcattaatct 6084153  T
Q  205 cta 207  Q
    |||    
T  6084152 cta 6084150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 1290074 - 1290119
Alignment:
Q  143 atggatcaaattatgtcataatgttctatcatcaatcatatttgga 188  Q
    ||||||||||||||| |||||||||||||||| || ||||||||||    
T  1290074 atggatcaaattatgccataatgttctatcataaaccatatttgga 1290119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 174
Target Start/End: Original strand, 26113452 - 26113513
Alignment:
Q  113 agtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||| || ||| |||| ||||||| ||||||||||||| | ||||||||||||||||    
T  26113452 agtcttatcccactaagtgagctcggctacatggatcaaattaagccataatgttctatcat 26113513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 207
Target Start/End: Complemental strand, 34444636 - 34444531
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| || ||||||||||   ||||||||| ||| || || ||||||||||| | |||||||||    
T  34444636 aacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaattacaccataatgttttattataaaccatatttggatccaactcattaa 34444537  T
Q  202 cctcta 207  Q
     |||||    
T  34444536 tctcta 34444531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 51602336 - 51602227
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | | ||||| ||||||||||| | | ||| ||||||||||||  | || |||||||| | ||||||| |    
T  51602336 aacaacaaccaagccttatcccactaagtggggttggctacatggatcaaatgacgccatgatgttctatcatacaccaaatttggatccaactcattga 51602237  T
Q  202 cctctaaatc 211  Q
    ||||||||||    
T  51602236 cctctaaatc 51602227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 696550 - 696426
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtca-taatgttctatcatcaatcatatttggattctactcatta 200  Q
    ||||||||||||| |||||| || ||| || | ||||||| || |||||||| | | || || ||||||||||  || |||||||||||   |||||||     
T  696550 aacaacaaccaagccttatcccactaagtggggtcggctacattgatcaaatgacgccaatagtgttctatcaaaaaccatatttggatcaaactcattg 696451  T
Q  201 acctctaaatctttcataatggttt 225  Q
    ||||||||||||||  |||||||||    
T  696450 acctctaaatcttttctaatggttt 696426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 1704907 - 1704835
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    |||||||||||||||||||| || ||| || | || || | ||||||||||||||| ||| ||||||||||||    
T  1704907 aacaacaaccaagtcttatcacactaagtggggtcagcaacatggatcaaattatgccatgatgttctatcat 1704835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 22175425 - 22175341
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttg 186  Q
    |||| |||||||| |||||| || ||| || | ||||||| |||||||||||| |  |||||||||||||||| || ||||||||    
T  22175425 aacaccaaccaagccttatcccactaagtggggtcggctacatggatcaaattctaccataatgttctatcataaaccatatttg 22175341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 210
Target Start/End: Original strand, 24020269 - 24020377
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| ||  || || | | ||||  ||||||||||| | | |||| ||||||||||| ||||| |||||||| | ||||||| |    
T  24020269 aacaacaaccaagccttatcccacaaagtggggttggctgcatggatcaaatgacgccatagtgttctatcataaatcaaatttggatccaactcattga 24020368  T
Q  202 cctctaaat 210  Q
    |||||||||    
T  24020369 cctctaaat 24020377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 41612037 - 41611974
Alignment:
Q  150 aaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatcttt 214  Q
    ||||||||| |||||||||||| || || |||||||| |||| |||||||||| |||||||||||    
T  41612037 aaattatgt-ataatgttctatgataaaccatatttgaattcaactcattaacatctaaatcttt 41611974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 44751764 - 44751692
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||| |||||| || ||| |||| ||||||| ||||||||||| | | |||| |||||||||||    
T  44751764 aacaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaatgacgccatagtgttctatcat 44751692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 2544873 - 2544790
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatattt 185  Q
    ||||||||||||| ||| |  || ||| || | ||||||| ||||||||||||||| ||||||||||||| || || |||||||    
T  2544873 aacaacaaccaagccttttaccactaagtggggtcggctacatggatcaaattatgccataatgttctattataaaccatattt 2544790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 4029402 - 4029279
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||||||||| || ||| || | ||||||| |||||||||||   | |||| |||| ||||||  | || |||||||| | ||||||| |    
T  4029402 aacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaatgtcgccatagtgttatatcatacaccaaatttggatccaactcattga 4029303  T
Q  202 cctctaaatctttcataatggttt 225  Q
    ||| |||||| ||  |||||||||    
T  4029302 cctttaaatcctttctaatggttt 4029279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 8672198 - 8672075
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| ||||||  | ||| || | | ||||||||||||||||| | |  ||| |||||||||||  | || |||||||| | ||||||| |    
T  8672198 aacaacaaccaagccttatcctactaagtggggttggctatatggatcaaatgacgctatagtgttctatcatacaccaaatttggatccaactcattga 8672099  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  8672098 cctctaaatcctttctaatggttt 8672075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 225
Target Start/End: Original strand, 9599432 - 9599519
Alignment:
Q  138 gctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    |||| ||||||||||||| | ||||| |||||||||| || ||||| |||||   ||||||||| |||||||| |||| |||| ||||    
T  9599432 gctacatggatcaaattacgccataacgttctatcataaaccatatctggatcaaactcattaaactctaaatatttcctaatagttt 9599519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 39515870 - 39515969
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||||||||||||| |||||| | |  |||| || |||||||  ||| |||||||||||| ||| |  ||||||| ||| | |||||||||    
T  39515870 aacaacaaccaagtcttatctcactaattgtggttagctacatagatcaaacaatgccataatgttctaccataatccatattttgatccaactcattaa 39515969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 185
Target Start/End: Complemental strand, 50257850 - 50257767
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatattt 185  Q
    ||||||||| ||| ||||||||| ||| || | | ||||| |||||||||||||   |||||||||||||||| || |||||||    
T  50257850 aacaacaacgaagccttatctcactaagtggggttggctacatggatcaaattacaccataatgttctatcataaaccatattt 50257767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 52633215 - 52633298
Alignment:
Q  143 atggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggtttt 226  Q
    ||||| |||| ||||||||| ||||||||||| || |||||||  || | | ||||||| || ||||||||||||||| |||||    
T  52633215 atggaccaaaatatgtcatattgttctatcataaaccatatttatatacaattcattaatctataaatctttcataatagtttt 52633298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 16142023 - 16142105
Alignment:
Q  143 atggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||||||||||| |||||| ||||| ||||| || |||| ||||||   ||| ||||| ||||||||||||  |||||||||    
T  16142023 atggatcaaattacgtcatattgttcgatcataaaccataattggatctaacttattaaactctaaatcttttctaatggttt 16142105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 27072522 - 27072572
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatattt 185  Q
    ||||||| ||||||||||||| | |||||||||||||||| || |||||||    
T  27072522 tcggctacatggatcaaattacgccataatgttctatcataaaccatattt 27072572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 215
Target Start/End: Original strand, 48865744 - 48865822
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttc 215  Q
    ||||| |||||||||||||   |||||| ||||||||| || ||||| |||||   | |||||||||||||||||||||    
T  48865744 ggctacatggatcaaattacaccataatattctatcataaaccatatctggatctaattcattaacctctaaatctttc 48865822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 8392017 - 8391940
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatcttt 214  Q
    ||||| ||||||||||| | | |||| | ||||||||  |||||||||||||| | ||| ||| ||||||||||||||    
T  8392017 ggctacatggatcaaatgacgccatagtattctatcaaaaatcatatttggatccaacttattgacctctaaatcttt 8391940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 5114023 - 5113951
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||   ||||| || |||||||| ||||||| ||| ||||||| | |||||| |||||||||||    
T  5114023 aacaacaaccaaacgttatcccactaattgaggtcggctacatgaatcaaatgacgtcatagtgttctatcat 5113951  T

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Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 9593014 - 9592942
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||| |||||| |||||| || | ||||||| ||||||||||| | |  ||| |||||||||||    
T  9593014 aacaacaaccaagccttatcccattaagtggggtcggctacatggatcaaatgacgctatagtgttctatcat 9592942  T

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Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 10569073 - 10569145
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||| |||||| | |||| ||  | |||||| ||||||||||| || | |||||||||||||||    
T  10569073 aacaacaaccaagccttatccctttaagtggaaccggctacatggatcaaatgatattataatgttctatcat 10569145  T

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Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 19822127 - 19822083
Alignment:
Q  143 atggatcaaattatgtcataatgttctatcatcaatcatatttgg 187  Q
    ||||||||||||| ||| |||||||||||||| || |||||||||    
T  19822127 atggatcaaattacgtcgtaatgttctatcataaaccatatttgg 19822083  T

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Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 225
Target Start/End: Complemental strand, 26299274 - 26299242
Alignment:
Q  193 actcattaacctctaaatctttcataatggttt 225  Q
    |||||||||||||||||||||||||||| ||||    
T  26299274 actcattaacctctaaatctttcataatagttt 26299242  T

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Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 29577532 - 29577460
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||    
T  29577532 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcat 29577460  T

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Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 32082791 - 32082883
Alignment:
Q  135 tcggctatatggatcaaatta-tgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggtttt 226  Q
    ||||||| ||||||||||| | || | || ||||||||||  || |||||||| || | ||||||| ||||||||||||||  ||||||||||    
T  32082791 tcggctacatggatcaaatgactgccgtagtgttctatcaaaaaccatatttgaatccaactcattgacctctaaatcttttctaatggtttt 32082883  T

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Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 42337836 - 42337764
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||| |||||| || ||| || | | ||||| ||||||||||| ||| |||| |||||||||||    
T  42337836 aacaacaaccaagccttatcccactaagtggggttggctacatggatcaaatgatgccatagtgttctatcat 42337764  T

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Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 50846809 - 50846729
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttc 215  Q
    ||||||| || |||||||||||| |||||||||||||||| ||  |||||| | ||| |||| ||||  || |||||||||    
T  50846809 tcggctacatagatcaaattatgccataatgttctatcataaactatattttggttcaactcgttaatttccaaatctttc 50846729  T

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Target: scaffold0570 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 950 - 1073
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | || |||| ||||||||||| | | |||| |||||||||||  | || |||||||| | ||||||| |    
T  950 aacaacaaccaagccttatcccactaaatggggtcagctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcattga 1049  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  1050 cctctaaatcttttttaatggttt 1073  T

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Target: scaffold0041 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 16858 - 16735
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| ||   ||||||| || |||||||| | | |||| ||||||||||  || ||||||||||| | ||||||| |    
T  16858 aacaacaaccaagccttatcccactaagtggagtcggctacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattga 16759  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||||||  |||||||||    
T  16758 cctctaaatcttttctaatggttt 16735  T

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Target: scaffold0692 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 4916 - 4793
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||||||||  ||||| ||  || || | ||||||| | ||||||||||| | |||| ||||||||||| || ||||||||||||  ||||||| |    
T  4916 aacaacaaccaagcgttatcccacaaagtggggtcggctacacggatcaaattacgccatagtgttctatcataaaccatatttggatttaactcattga 4817  T
Q  202 cctctaaatctttcataatggttt 225  Q
    | |||||||| ||  |||||||||    
T  4816 cgtctaaatcctttctaatggttt 4793  T

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Target: scaffold0157 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 25534 - 25657
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | || |||| |||||| |||| | |||||| |||||||||||  | || |||||||| | ||||||| |    
T  25534 aacaacaaccaagccttatcccactaagtggggtccgctacatggattaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattga 25633  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  25634 cctctaaatcctttctaatggttt 25657  T

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Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 31748 - 31625
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| |  ||| | |||||||||||  | || |||||||| | ||||||| |    
T  31748 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacttcacagtgttctatcatacaccaaatttggatccaactcattga 31649  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  31648 cctctaaatcctttctaatggttt 31625  T

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Target: scaffold0491 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 3713 - 3643
Alignment:
Q  106 acaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatca 176  Q
    |||||||||||||||| || ||| || | |||||||  |||||||||||| ||||||||||||||| ||||    
T  3713 acaaccaagtcttatcccactaagtggggtcggctacttggatcaaattacgtcataatgttctattatca 3643  T

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Target: scaffold0245 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 16479 - 16524
Alignment:
Q  143 atggatcaaattatgtcataatgttctatcatcaatcatatttgga 188  Q
    ||||||||||||||| |||||||||||||||| || ||||||||||    
T  16479 atggatcaaattatgccataatgttctatcataaaccatatttgga 16524  T

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Target: scaffold1318 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 611 - 488
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaa 201  Q
    |||||||| |||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||  | || |||||| | | ||||||| |    
T  611 aacaacaatcaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttgggtacaactcattga 512  T
Q  202 cctctaaatctttcataatggttt 225  Q
    |||||||||| ||  |||||||||    
T  511 cctctaaatcctttctaatggttt 488  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 86652 - 86698
Alignment:
Q  143 atggatcaaattatgtcataatgttctatcatcaatcatatttggat 189  Q
    ||||||||||||| |||||| |||||||||||  |||||||||||||    
T  86652 atggatcaaattacgtcatagtgttctatcatacatcatatttggat 86698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 220
Target Start/End: Complemental strand, 39558 - 39481
Alignment:
Q  143 atggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataat 220  Q
    |||||| |||||| | ||| |||||||||||| || || |||||||| | |||||||| | |||||||||||| ||||    
T  39558 atggattaaattacgccatcatgttctatcataaaccacatttggatccaactcattaccatctaaatctttcctaat 39481  T

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Target: scaffold0199 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 225
Target Start/End: Complemental strand, 14828 - 14740
Alignment:
Q  137 ggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcattaacctctaaatctttcataatggttt 225  Q
    ||||| ||||||||||||| | |||| ||||| ||||| || |||||||| || | ||||||| |||| |||||| ||  |||||||||    
T  14828 ggctacatggatcaaattacgccatagtgttcaatcataaaccatatttgaatccaactcattgacctttaaatcctttctaatggttt 14740  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 28891 - 28963
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgagatcggctatatggatcaaattatgtcataatgttctatcat 174  Q
    ||||||||||||| |||||| || ||| || | ||||||| ||||||||||| | | |||| |||||||||||    
T  28891 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcat 28963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 58261 - 58309
Alignment:
Q  135 tcggctatatggatcaaattatgtcataatgttctatcatcaatcatat 183  Q
    ||||||| ||||||||||||| | |||||||||||||||| || |||||    
T  58261 tcggctacatggatcaaattacgacataatgttctatcataaaccatat 58309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 4282 - 4406
Alignment:
Q  102 aacaacaaccaagtcttatctcattaattgaga-tcggctatatggatcaaattatgtcataatgttctatcatcaatcatatttggattctactcatta 200  Q
    ||||| ||||||| |||||| |||||| || |  ||| ||| ||||||||||| | |||||| |||||||| || || || |||| ||| | |||||||     
T  4282 aacaagaaccaagccttatcccattaaatgggggtcgcctacatggatcaaataacgtcatagtgttctattataaaccaaatttagatccaactcattg 4381  T
Q  201 acctctaaatctttcataatggttt 225  Q
    ||||||||||| ||  |||||||||    
T  4382 acctctaaatcctttctaatggttt 4406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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