View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17942_high_29 (Length: 217)

Name: NF17942_high_29
Description: NF17942
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17942_high_29
NF17942_high_29
[»] chr4 (9 HSPs)
chr4 (6-181)||(37991600-37991775)
chr4 (13-55)||(32570686-32570728)
chr4 (13-53)||(48262880-48262920)
chr4 (6-49)||(6807038-6807081)
chr4 (6-52)||(5474053-5474099)
chr4 (6-52)||(6882579-6882625)
chr4 (6-52)||(32882571-32882617)
chr4 (11-52)||(25684141-25684182)
chr4 (13-53)||(25607738-25607778)
[»] chr5 (10 HSPs)
chr5 (97-156)||(6378689-6378747)
chr5 (6-55)||(1445771-1445821)
chr5 (6-52)||(24431848-24431895)
chr5 (6-52)||(2011103-2011149)
chr5 (6-52)||(9499714-9499760)
chr5 (6-52)||(10118291-10118337)
chr5 (6-52)||(13956631-13956677)
chr5 (6-52)||(16602408-16602454)
chr5 (6-51)||(13593330-13593375)
chr5 (6-51)||(29665869-29665914)
[»] chr3 (4 HSPs)
chr3 (97-156)||(48817588-48817647)
chr3 (6-54)||(51996466-51996514)
chr3 (6-52)||(20199660-20199706)
chr3 (6-52)||(24397696-24397742)
[»] chr1 (13 HSPs)
chr1 (97-156)||(26068195-26068254)
chr1 (97-156)||(28975616-28975674)
chr1 (6-54)||(14077641-14077689)
chr1 (6-54)||(34410996-34411044)
chr1 (12-52)||(46918700-46918740)
chr1 (97-156)||(21274682-21274741)
chr1 (6-52)||(24511890-24511937)
chr1 (6-52)||(17203060-17203106)
chr1 (6-52)||(24677601-24677647)
chr1 (6-52)||(39084758-39084804)
chr1 (6-52)||(39871433-39871479)
chr1 (13-53)||(32912259-32912299)
chr1 (13-53)||(33986191-33986231)
[»] chr2 (7 HSPs)
chr2 (6-56)||(7069506-7069556)
chr2 (13-55)||(38073152-38073194)
chr2 (13-55)||(42640896-42640938)
chr2 (6-52)||(7366814-7366860)
chr2 (6-52)||(8504076-8504122)
chr2 (6-52)||(41184799-41184845)
chr2 (6-51)||(28318090-28318135)
[»] chr8 (4 HSPs)
chr8 (6-52)||(5982232-5982278)
chr8 (6-48)||(30777325-30777367)
chr8 (6-52)||(44636969-44637015)
chr8 (6-54)||(34520883-34520930)
[»] chr7 (2 HSPs)
chr7 (6-52)||(2932624-2932670)
chr7 (13-55)||(8577970-8578012)
[»] chr6 (2 HSPs)
chr6 (6-52)||(229859-229905)
chr6 (6-52)||(11273432-11273478)


Alignment Details
Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 6 - 181
Target Start/End: Complemental strand, 37991775 - 37991600
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaagtaaaactaccgtagaagttcccttgnnnnnnnnnnnnnnnnnnnattattgct 105  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||                   ||||||| |    
T  37991775 taactacttatttcataaaatgatcgttaatatataaatttatgaagtaaaactaccgtagaagttcccttgttttttttgttttgtttttattattgtt 37991676  T
Q  106 tttgttggaccaatgaaaatttgccaagtcaagagtggtgggaagggtgtacaatagaaggtgtgtctatttataa 181  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||    
T  37991675 tttgttggaccaatcaaaatttgccaagtcaagagtggttggaagggtgtagaatagaaggtgtgtctatctataa 37991600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 32570686 - 32570728
Alignment:
Q  13 ttatttcataaaatgatcgttagtatataaatttatgaagtaa 55  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  32570686 ttatttcataaaatgatcgttaatttataaatttatgaagtaa 32570728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 48262880 - 48262920
Alignment:
Q  13 ttatttcataaaatgatcgttagtatataaatttatgaagt 53  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  48262880 ttatttcataaaatgatcgttaatttataaatttatgaagt 48262920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 49
Target Start/End: Complemental strand, 6807081 - 6807038
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatg 49  Q
    |||||||||||||||||||||||| |||| | ||||||||||||    
T  6807081 taactacttatttcataaaatgattgttaatttataaatttatg 6807038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 5474099 - 5474053
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  5474099 taacaacttatttcataaaatgatcattaatttataaatttatgaag 5474053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 6882625 - 6882579
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  6882625 taacaacttatttcataaaatgatcattaatttataaatttatgaag 6882579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 32882571 - 32882617
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  32882571 taacaacttatttcataaaatgatcattaatttataaatttatgaag 32882617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 25684182 - 25684141
Alignment:
Q  11 acttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||||||||||||||||||| ||| | |||||||||||||||    
T  25684182 acttatttcataaaatgatcattaatttataaatttatgaag 25684141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 25607778 - 25607738
Alignment:
Q  13 ttatttcataaaatgatcgttagtatataaatttatgaagt 53  Q
    |||||||||||||| ||||||| | ||||||||||||||||    
T  25607778 ttatttcataaaataatcgttaatttataaatttatgaagt 25607738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 6378689 - 6378747
Alignment:
Q  97 attattgcttttgttggaccaatgaaaatttgccaagtcaagagtggtgggaagggtgta 156  Q
    ||||||||||||||||||||||| ||| |||||||||| |||| ||||||||||||||||    
T  6378689 attattgcttttgttggaccaataaaagtttgccaagt-aagaatggtgggaagggtgta 6378747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 1445821 - 1445771
Alignment:
Q  6 taactacttatttcataaaat-gatcgttagtatataaatttatgaagtaa 55  Q
    |||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  1445821 taactatttatttcataaaattgatcgttagtttataaatttatgaagtaa 1445771  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 24431895 - 24431848
Alignment:
Q  6 taactacttatttcataaaat-gatcgttagtatataaatttatgaag 52  Q
    |||||| |||||||||||||| |||||||||| |||||||||||||||    
T  24431895 taactatttatttcataaaattgatcgttagtttataaatttatgaag 24431848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 2011149 - 2011103
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  2011149 taacaacttatttcataaaatgatcattaatttataaatttatgaag 2011103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 9499714 - 9499760
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  9499714 taacaacttatttcataaaatgatccttaatttataaatttatgaag 9499760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 10118337 - 10118291
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  10118337 taacaacttatttcataaaatgatcattaatttataaatttatgaag 10118291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 13956677 - 13956631
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    ||||||||||||| ||||||||||||||| | ||||||||| |||||    
T  13956677 taactacttattttataaaatgatcgttaatttataaatttgtgaag 13956631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 16602454 - 16602408
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  16602454 taacaacttatttcataaaatgatcattaatttataaatttatgaag 16602408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 13593375 - 13593330
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaa 51  Q
    |||| |||||||||||||||||||| ||| | ||||||||||||||    
T  13593375 taacaacttatttcataaaatgatcattaatttataaatttatgaa 13593330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 29665914 - 29665869
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaa 51  Q
    |||| |||||||||||||||||||| ||| | ||||||||||||||    
T  29665914 taacaacttatttcataaaatgatccttaatttataaatttatgaa 29665869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 48817647 - 48817588
Alignment:
Q  97 attattgcttttgttggaccaatgaaaatttgccaagtcaagagtggtgggaagggtgta 156  Q
    |||||||||||| |||||||||| |||||||||||| |||  ||||||||||||||||||    
T  48817647 attattgcttttattggaccaataaaaatttgccaaatcagaagtggtgggaagggtgta 48817588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 51996514 - 51996466
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaagta 54  Q
    |||||||||||||||||||||||| |||| | |||||||||||| ||||    
T  51996514 taactacttatttcataaaatgattgttaatttataaatttatgtagta 51996466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 20199660 - 20199706
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  20199660 taacaacttatttcataaaatgatccttaatttataaatttatgaag 20199706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 24397696 - 24397742
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  24397696 taacaacttatttcataaaatgatcattaatttataaatttatgaag 24397742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 26068195 - 26068254
Alignment:
Q  97 attattgcttttgttggaccaatgaaaatttgccaagtcaagagtggtgggaagggtgta 156  Q
    |||||||||||| |||||||||| |||||||||||| |||  ||||||||||||||||||    
T  26068195 attattgcttttattggaccaataaaaatttgccaaatcagaagtggtgggaagggtgta 26068254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 28975674 - 28975616
Alignment:
Q  97 attattgcttttgttggaccaatgaaaatttgccaagtcaagagtggtgggaagggtgta 156  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||    
T  28975674 attattgcttttgttggaccaataaaagtttgccaagt-aagagtggtggaaagggtgta 28975616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 14077641 - 14077689
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaagta 54  Q
    |||||||||||||||||||||||| |||| | |||||||||||| ||||    
T  14077641 taactacttatttcataaaatgattgttaatttataaatttatgtagta 14077689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 34411044 - 34410996
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaagta 54  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||||    
T  34411044 taacaacttatttcataaaatgatcattaatttataaatttatgaagta 34410996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 46918700 - 46918740
Alignment:
Q  12 cttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    ||||||||||||||||||||||| | |||||||||||||||    
T  46918700 cttatttcataaaatgatcgttaatttataaatttatgaag 46918740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 21274682 - 21274741
Alignment:
Q  97 attattgcttttgttggaccaatgaaaatttgccaagtcaagagtggtgggaagggtgta 156  Q
    |||||||||||| ||||| |||| |||||||||||| |||  ||||||||||| ||||||    
T  21274682 attattgcttttattggatcaataaaaatttgccaaatcagaagtggtgggaatggtgta 21274741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 24511890 - 24511937
Alignment:
Q  6 taactacttatttcataaaat-gatcgttagtatataaatttatgaag 52  Q
    |||||| |||||||||||||| |||||||||| |||||||||||||||    
T  24511890 taactatttatttcataaaattgatcgttagtttataaatttatgaag 24511937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 17203060 - 17203106
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  17203060 taacaacttatttcataaaatgatcattaatttataaatttatgaag 17203106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 24677647 - 24677601
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  24677647 taacaacttatttcataaaatgatcattaatttataaatttatgaag 24677601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 39084804 - 39084758
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  39084804 taacaacttatttcataaaatgatcattaatttataaatttatgaag 39084758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 39871479 - 39871433
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  39871479 taacaacttatttcataaaatgatcattactttataaatttatgaag 39871433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 32912299 - 32912259
Alignment:
Q  13 ttatttcataaaatgatcgttagtatataaatttatgaagt 53  Q
    ||||||| |||||||||||||| | ||||||||||||||||    
T  32912299 ttatttcttaaaatgatcgttaatttataaatttatgaagt 32912259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 33986191 - 33986231
Alignment:
Q  13 ttatttcataaaatgatcgttagtatataaatttatgaagt 53  Q
    |||||||||||||||||||||| | ||||||||||| ||||    
T  33986191 ttatttcataaaatgatcgttaatttataaatttataaagt 33986231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000008; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 7069506 - 7069556
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaagtaaa 56  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||||||    
T  7069506 taacaacttatttcataaaatgatcattaatttataaatttatgaagtaaa 7069556  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 38073194 - 38073152
Alignment:
Q  13 ttatttcataaaatgatcgttagtatataaatttatgaagtaa 55  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  38073194 ttatttcataaaatgatcgttaatttataaatttatgaagtaa 38073152  T

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Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 42640938 - 42640896
Alignment:
Q  13 ttatttcataaaatgatcgttagtatataaatttatgaagtaa 55  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  42640938 ttatttcataaaatgatcgttaatttataaatttatgaagtaa 42640896  T

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Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 7366814 - 7366860
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  7366814 taacaacttatttcataaaatgatcattaatttataaatttatgaag 7366860  T

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Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 8504122 - 8504076
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  8504122 taacaacttatttcataaaatgatcattaatttataaatttatgaag 8504076  T

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Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 41184799 - 41184845
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  41184799 taacaacttatttcataaaatgatcattaatttataaatttatgaag 41184845  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 28318135 - 28318090
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaa 51  Q
    |||| |||||||||||||||||||| ||| | ||||||||||||||    
T  28318135 taacaacttatttcataaaatgatcattaatttataaatttatgaa 28318090  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000002; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 5982278 - 5982232
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  5982278 taacaacttatttcataaaatgatcattaatttataaatttatgaag 5982232  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 48
Target Start/End: Complemental strand, 30777367 - 30777325
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttat 48  Q
    ||||||||||||||||||||||||||||| |  ||||||||||    
T  30777367 taactacttatttcataaaatgatcgttaattcataaatttat 30777325  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 44637015 - 44636969
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  44637015 taacaacttatttcataaaatgatcattaatttataaatttatgaag 44636969  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 34520883 - 34520930
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaagta 54  Q
    ||||||||||||||| ||||||||||||| |  ||||||||||||||||    
T  34520883 taactacttatttca-aaaatgatcgttaattcataaatttatgaagta 34520930  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 2932670 - 2932624
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  2932670 taacaacttatttcataaaatgatcattaatttataaatttatgaag 2932624  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 8578012 - 8577970
Alignment:
Q  13 ttatttcataaaatgatcgttagtatataaatttatgaagtaa 55  Q
    |||||| ||||||||||||||| | ||||||||||||||||||    
T  8578012 ttattttataaaatgatcgttaatttataaatttatgaagtaa 8577970  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 229905 - 229859
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  229905 taacaacttatttcataaaatgatcattaatttataaatttatgaag 229859  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 11273478 - 11273432
Alignment:
Q  6 taactacttatttcataaaatgatcgttagtatataaatttatgaag 52  Q
    |||| |||||||||||||||||||| ||| | |||||||||||||||    
T  11273478 taacaacttatttcataaaatgatctttaatttataaatttatgaag 11273432  T

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