View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17943_low_29 (Length: 250)

Name: NF17943_low_29
Description: NF17943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17943_low_29
NF17943_low_29
[»] chr2 (48 HSPs)
chr2 (3-240)||(44955146-44955384)
chr2 (4-114)||(44721682-44721792)
chr2 (7-75)||(22538549-22538617)
chr2 (4-84)||(36665437-36665517)
chr2 (4-75)||(2114452-2114523)
chr2 (4-75)||(22297469-22297540)
chr2 (17-96)||(23683716-23683795)
chr2 (4-99)||(36426849-36426944)
chr2 (17-75)||(32891619-32891677)
chr2 (7-56)||(16028144-16028193)
chr2 (4-65)||(24034080-24034141)
chr2 (4-97)||(32988357-32988450)
chr2 (4-104)||(9547115-9547215)
chr2 (4-84)||(17239908-17239988)
chr2 (4-64)||(39726462-39726522)
chr2 (4-75)||(580800-580871)
chr2 (18-97)||(9796918-9796997)
chr2 (4-55)||(32943346-32943397)
chr2 (4-75)||(36520797-36520868)
chr2 (4-99)||(38820582-38820676)
chr2 (7-57)||(10262749-10262799)
chr2 (18-114)||(11133097-11133193)
chr2 (7-99)||(15392204-15392296)
chr2 (19-75)||(25731956-25732012)
chr2 (8-64)||(27495549-27495605)
chr2 (4-84)||(32891288-32891368)
chr2 (7-75)||(41699112-41699180)
chr2 (4-75)||(7086260-7086331)
chr2 (4-99)||(20122468-20122563)
chr2 (7-66)||(31956876-31956935)
chr2 (2-56)||(38530230-38530285)
chr2 (17-75)||(17154669-17154727)
chr2 (4-66)||(36481076-36481138)
chr2 (4-57)||(40044114-40044168)
chr2 (2-82)||(2304294-2304375)
chr2 (18-75)||(9802913-9802970)
chr2 (4-77)||(16973915-16973988)
chr2 (4-57)||(20208868-20208921)
chr2 (4-57)||(25050275-25050328)
chr2 (18-75)||(29034997-29035054)
chr2 (4-57)||(30474230-30474283)
chr2 (4-57)||(34620525-34620578)
chr2 (8-69)||(45523676-45523737)
chr2 (7-59)||(3179334-3179386)
chr2 (4-44)||(10207652-10207692)
chr2 (4-56)||(18386848-18386900)
chr2 (18-66)||(19905681-19905729)
chr2 (23-75)||(40471179-40471231)
[»] chr1 (48 HSPs)
chr1 (4-84)||(48110536-48110616)
chr1 (4-99)||(15368812-15368907)
chr1 (4-57)||(4429517-4429570)
chr1 (7-75)||(11802037-11802105)
chr1 (4-99)||(4354098-4354193)
chr1 (8-99)||(23930537-23930628)
chr1 (4-75)||(37733762-37733833)
chr1 (4-57)||(16110055-16110108)
chr1 (23-66)||(43020637-43020680)
chr1 (4-66)||(18923911-18923973)
chr1 (7-57)||(20357470-20357520)
chr1 (7-57)||(20562435-20562485)
chr1 (7-57)||(49251430-49251480)
chr1 (29-78)||(5315594-5315643)
chr1 (18-75)||(29491491-29491548)
chr1 (4-77)||(49010715-49010788)
chr1 (27-75)||(8227977-8228025)
chr1 (18-66)||(11907328-11907376)
chr1 (7-75)||(15774329-15774397)
chr1 (8-100)||(23463978-23464070)
chr1 (5-57)||(30649101-30649153)
chr1 (4-66)||(17871107-17871167)
chr1 (4-75)||(27745164-27745235)
chr1 (4-99)||(29331157-29331252)
chr1 (4-75)||(42831954-42832025)
chr1 (4-99)||(43555867-43555962)
chr1 (4-75)||(46116191-46116262)
chr1 (4-75)||(49606715-49606786)
chr1 (24-66)||(23758279-23758321)
chr1 (17-99)||(49916460-49916542)
chr1 (20-57)||(749621-749658)
chr1 (17-98)||(8865171-8865252)
chr1 (4-97)||(11213444-11213537)
chr1 (18-75)||(11405477-11405534)
chr1 (18-75)||(17350082-17350139)
chr1 (17-66)||(43092173-43092222)
chr1 (18-75)||(52833123-52833180)
chr1 (23-75)||(2903044-2903096)
chr1 (4-40)||(5172654-5172690)
chr1 (22-62)||(5680737-5680777)
chr1 (4-52)||(8261715-8261763)
chr1 (17-57)||(17056915-17056955)
chr1 (30-66)||(28564343-28564379)
chr1 (23-75)||(31965538-31965590)
chr1 (19-75)||(35619025-35619081)
chr1 (7-99)||(37490900-37490992)
chr1 (4-40)||(38020000-38020036)
chr1 (19-55)||(40814803-40814839)
[»] chr8 (51 HSPs)
chr8 (8-99)||(6978831-6978922)
chr8 (5-75)||(24074514-24074584)
chr8 (4-66)||(43847709-43847771)
chr8 (18-75)||(6064398-6064455)
chr8 (18-62)||(6970674-6970718)
chr8 (4-99)||(23857316-23857412)
chr8 (17-57)||(25119228-25119268)
chr8 (8-64)||(25139915-25139971)
chr8 (7-75)||(26703907-26703975)
chr8 (17-77)||(30942614-30942674)
chr8 (4-75)||(7649536-7649606)
chr8 (4-75)||(10970273-10970344)
chr8 (26-77)||(12560060-12560111)
chr8 (4-75)||(15042382-15042453)
chr8 (21-75)||(13702369-13702423)
chr8 (18-75)||(1588788-1588845)
chr8 (4-57)||(5184922-5184975)
chr8 (4-57)||(9524964-9525017)
chr8 (4-57)||(24608518-24608571)
chr8 (8-77)||(42688067-42688136)
chr8 (17-65)||(2376538-2376586)
chr8 (19-75)||(5323944-5324000)
chr8 (17-53)||(7603751-7603787)
chr8 (4-75)||(1032978-1033048)
chr8 (18-57)||(4293904-4293943)
chr8 (4-75)||(4798558-4798629)
chr8 (4-75)||(27868713-27868784)
chr8 (4-55)||(39484407-39484458)
chr8 (32-82)||(2282547-2282597)
chr8 (17-75)||(8034550-8034608)
chr8 (17-75)||(10199759-10199817)
chr8 (4-66)||(17980289-17980351)
chr8 (18-56)||(35301199-35301237)
chr8 (4-66)||(35556412-35556474)
chr8 (4-114)||(43468683-43468793)
chr8 (18-75)||(2696554-2696611)
chr8 (18-75)||(2800040-2800097)
chr8 (4-57)||(8682388-8682441)
chr8 (18-75)||(10292373-10292430)
chr8 (29-66)||(12676271-12676308)
chr8 (18-75)||(22426422-22426479)
chr8 (4-49)||(28465625-28465670)
chr8 (18-75)||(33570446-33570503)
chr8 (7-56)||(40249916-40249965)
chr8 (4-69)||(41089173-41089238)
chr8 (1-34)||(42523883-42523916)
chr8 (17-57)||(7540523-7540563)
chr8 (29-65)||(10573136-10573172)
chr8 (23-75)||(25470863-25470915)
chr8 (7-75)||(37219515-37219583)
chr8 (4-55)||(41225701-41225753)
[»] chr7 (36 HSPs)
chr7 (4-99)||(7262991-7263086)
chr7 (4-75)||(27047732-27047803)
chr7 (17-66)||(30699822-30699871)
chr7 (4-77)||(46716340-46716413)
chr7 (2-75)||(30152746-30152819)
chr7 (4-60)||(38025348-38025404)
chr7 (20-75)||(24304300-24304355)
chr7 (4-75)||(36315991-36316062)
chr7 (7-56)||(2366367-2366416)
chr7 (4-57)||(23685589-23685642)
chr7 (4-57)||(34962007-34962060)
chr7 (18-75)||(48525599-48525655)
chr7 (23-75)||(35195869-35195921)
chr7 (7-67)||(43970878-43970938)
chr7 (7-75)||(45198115-45198183)
chr7 (4-75)||(34948113-34948184)
chr7 (4-99)||(42887161-42887256)
chr7 (7-69)||(14967657-14967719)
chr7 (7-69)||(15397133-15397195)
chr7 (4-99)||(22741210-22741307)
chr7 (7-57)||(24396955-24397005)
chr7 (7-65)||(25818296-25818354)
chr7 (23-77)||(39524714-39524767)
chr7 (4-66)||(44437851-44437913)
chr7 (4-66)||(47552220-47552282)
chr7 (4-57)||(924327-924380)
chr7 (23-64)||(10020497-10020538)
chr7 (20-57)||(15912798-15912835)
chr7 (18-75)||(20527446-20527503)
chr7 (7-84)||(25711139-25711216)
chr7 (4-57)||(30644176-30644229)
chr7 (18-55)||(41139108-41139145)
chr7 (8-57)||(46337903-46337952)
chr7 (4-40)||(4590658-4590694)
chr7 (4-40)||(21086111-21086147)
chr7 (4-40)||(22047527-22047563)
[»] chr5 (38 HSPs)
chr5 (4-75)||(18872528-18872599)
chr5 (4-66)||(27440324-27440386)
chr5 (18-99)||(3102120-3102201)
chr5 (4-84)||(19982256-19982336)
chr5 (23-77)||(7147034-7147088)
chr5 (2-75)||(32158431-32158504)
chr5 (8-60)||(14487572-14487624)
chr5 (4-84)||(42801449-42801529)
chr5 (7-57)||(26169047-26169097)
chr5 (17-114)||(2029106-2029203)
chr5 (18-75)||(4674832-4674889)
chr5 (18-75)||(6447497-6447554)
chr5 (18-75)||(9408967-9409024)
chr5 (4-57)||(21017641-21017694)
chr5 (22-75)||(28378082-28378135)
chr5 (20-84)||(6614046-6614110)
chr5 (7-75)||(31934892-31934960)
chr5 (20-75)||(36045151-36045206)
chr5 (22-72)||(4418334-4418383)
chr5 (18-56)||(9963437-9963475)
chr5 (21-99)||(10943740-10943818)
chr5 (2-56)||(29144147-29144201)
chr5 (7-57)||(33800903-33800953)
chr5 (17-75)||(39760094-39760152)
chr5 (4-58)||(40339133-40339187)
chr5 (18-75)||(1463892-1463949)
chr5 (7-84)||(13754016-13754093)
chr5 (4-57)||(18478010-18478063)
chr5 (4-57)||(19059039-19059092)
chr5 (4-73)||(29050807-29050876)
chr5 (4-57)||(42455429-42455482)
chr5 (17-57)||(7234907-7234947)
chr5 (4-52)||(7645142-7645190)
chr5 (4-56)||(19608620-19608672)
chr5 (7-55)||(23925553-23925601)
chr5 (23-55)||(24653168-24653200)
chr5 (4-84)||(29266075-29266155)
chr5 (7-55)||(33729788-33729836)
[»] chr4 (62 HSPs)
chr4 (7-66)||(9172397-9172456)
chr4 (4-98)||(53697974-53698068)
chr4 (4-84)||(20181218-20181298)
chr4 (4-75)||(32885695-32885766)
chr4 (20-98)||(6637716-6637794)
chr4 (5-75)||(51077875-51077945)
chr4 (3-75)||(27296827-27296900)
chr4 (18-75)||(36954158-36954215)
chr4 (7-99)||(33944356-33944448)
chr4 (4-75)||(23661375-23661446)
chr4 (8-99)||(34773676-34773767)
chr4 (4-75)||(47017963-47018034)
chr4 (4-66)||(5635196-5635258)
chr4 (17-75)||(8690234-8690292)
chr4 (17-75)||(35333005-35333063)
chr4 (6-75)||(47416477-47416546)
chr4 (18-75)||(48501675-48501732)
chr4 (18-75)||(53815717-53815774)
chr4 (4-56)||(6053987-6054039)
chr4 (26-66)||(15507575-15507615)
chr4 (19-59)||(15640476-15640516)
chr4 (18-82)||(42411464-42411528)
chr4 (4-75)||(17859785-17859856)
chr4 (4-75)||(22751016-22751087)
chr4 (4-99)||(24234067-24234162)
chr4 (18-69)||(26708575-26708625)
chr4 (20-75)||(40150496-40150551)
chr4 (4-75)||(45350283-45350354)
chr4 (4-75)||(45359762-45359833)
chr4 (4-75)||(46734986-46735057)
chr4 (4-99)||(56546442-56546537)
chr4 (7-57)||(8241408-8241458)
chr4 (18-84)||(9084780-9084846)
chr4 (17-75)||(37032196-37032254)
chr4 (29-63)||(42425919-42425953)
chr4 (17-99)||(43327318-43327400)
chr4 (17-75)||(56314781-56314839)
chr4 (4-57)||(3544467-3544520)
chr4 (4-57)||(9285694-9285747)
chr4 (8-57)||(9924867-9924916)
chr4 (8-57)||(13211387-13211436)
chr4 (18-75)||(14149814-14149871)
chr4 (18-75)||(28520748-28520805)
chr4 (8-57)||(35909198-35909247)
chr4 (18-75)||(36008296-36008353)
chr4 (2-75)||(43115273-43115346)
chr4 (4-97)||(45141228-45141321)
chr4 (18-75)||(48968227-48968284)
chr4 (4-57)||(52560771-52560824)
chr4 (7-75)||(3465593-3465661)
chr4 (4-40)||(4722516-4722552)
chr4 (4-84)||(10098132-10098212)
chr4 (4-56)||(16201303-16201355)
chr4 (4-84)||(29269323-29269402)
chr4 (4-40)||(35031390-35031426)
chr4 (19-75)||(35451138-35451194)
chr4 (17-57)||(43142523-43142563)
chr4 (4-40)||(43606152-43606188)
chr4 (4-40)||(50657887-50657923)
chr4 (2-57)||(52031211-52031267)
chr4 (4-64)||(55266463-55266523)
chr4 (31-75)||(56555582-56555626)
[»] chr3 (50 HSPs)
chr3 (4-99)||(13539957-13540052)
chr3 (4-75)||(50724375-50724445)
chr3 (4-75)||(50788403-50788473)
chr3 (2-99)||(49146089-49146186)
chr3 (4-75)||(33206764-33206835)
chr3 (4-99)||(36727456-36727550)
chr3 (4-59)||(43566829-43566884)
chr3 (4-69)||(19540348-19540413)
chr3 (18-99)||(36331719-36331800)
chr3 (7-84)||(55195869-55195946)
chr3 (7-75)||(32508811-32508879)
chr3 (20-75)||(28226204-28226259)
chr3 (4-59)||(40786287-40786342)
chr3 (4-75)||(49639035-49639106)
chr3 (17-99)||(13616067-13616149)
chr3 (17-99)||(31698553-31698635)
chr3 (18-75)||(14868706-14868763)
chr3 (4-57)||(20244141-20244194)
chr3 (18-75)||(47191394-47191451)
chr3 (3-55)||(21420226-21420278)
chr3 (4-56)||(34136770-34136822)
chr3 (19-75)||(38555045-38555100)
chr3 (9-57)||(39492833-39492881)
chr3 (19-75)||(43598821-43598876)
chr3 (4-75)||(14417875-14417946)
chr3 (4-55)||(35483276-35483327)
chr3 (4-59)||(35849312-35849367)
chr3 (17-84)||(37059467-37059534)
chr3 (7-66)||(41121881-41121940)
chr3 (23-114)||(44953139-44953230)
chr3 (4-75)||(48173293-48173364)
chr3 (8-75)||(53467960-53468026)
chr3 (4-66)||(24751286-24751348)
chr3 (2-56)||(29507222-29507276)
chr3 (23-57)||(34407125-34407159)
chr3 (18-75)||(9625004-9625061)
chr3 (18-75)||(27183698-27183755)
chr3 (18-75)||(36476380-36476437)
chr3 (18-66)||(3784091-3784139)
chr3 (4-52)||(13874874-13874921)
chr3 (4-56)||(16277987-16278039)
chr3 (7-99)||(23820639-23820731)
chr3 (23-75)||(26583127-26583179)
chr3 (23-75)||(28951892-28951944)
chr3 (4-40)||(34344829-34344865)
chr3 (4-40)||(34503222-34503258)
chr3 (20-56)||(37279650-37279686)
chr3 (4-56)||(42271049-42271101)
chr3 (18-114)||(43774206-43774302)
chr3 (5-105)||(47062054-47062153)
[»] chr6 (37 HSPs)
chr6 (4-57)||(19165358-19165411)
chr6 (7-66)||(9438312-9438371)
chr6 (4-75)||(10377141-10377212)
chr6 (8-99)||(34365746-34365837)
chr6 (4-57)||(18244047-18244100)
chr6 (4-57)||(32057041-32057094)
chr6 (4-75)||(35190770-35190841)
chr6 (4-74)||(22850818-22850888)
chr6 (4-57)||(19642582-19642635)
chr6 (7-75)||(5288362-5288430)
chr6 (4-100)||(22389742-22389838)
chr6 (4-75)||(12089104-12089175)
chr6 (4-75)||(23771040-23771111)
chr6 (20-75)||(26528590-26528645)
chr6 (18-57)||(31949860-31949899)
chr6 (4-66)||(7392545-7392607)
chr6 (20-66)||(10373618-10373664)
chr6 (4-54)||(24623529-24623579)
chr6 (23-57)||(25064704-25064738)
chr6 (18-75)||(2945617-2945674)
chr6 (4-57)||(12127944-12127997)
chr6 (19-64)||(26878822-26878867)
chr6 (4-57)||(34792879-34792931)
chr6 (23-75)||(1488114-1488166)
chr6 (18-114)||(3448373-3448469)
chr6 (4-60)||(6296940-6296996)
chr6 (4-60)||(6303750-6303806)
chr6 (4-104)||(8233093-8233193)
chr6 (18-82)||(9064887-9064951)
chr6 (7-75)||(9491752-9491820)
chr6 (23-75)||(11520743-11520795)
chr6 (12-64)||(12524986-12525037)
chr6 (29-65)||(19374839-19374875)
chr6 (4-56)||(20716428-20716480)
chr6 (4-40)||(22501025-22501061)
chr6 (7-75)||(30566068-30566136)
chr6 (17-69)||(34522013-34522065)
[»] scaffold0008 (1 HSPs)
scaffold0008 (4-75)||(43714-43784)
[»] scaffold0343 (1 HSPs)
scaffold0343 (17-66)||(8580-8629)
[»] scaffold0308 (1 HSPs)
scaffold0308 (4-75)||(7082-7154)
[»] scaffold0191 (1 HSPs)
scaffold0191 (4-66)||(16854-16915)
[»] scaffold0178 (1 HSPs)
scaffold0178 (4-57)||(4330-4383)
[»] scaffold0070 (1 HSPs)
scaffold0070 (18-75)||(12586-12643)
[»] scaffold0036 (1 HSPs)
scaffold0036 (18-75)||(25047-25104)
[»] scaffold0227 (1 HSPs)
scaffold0227 (20-75)||(21873-21927)
[»] scaffold1990 (1 HSPs)
scaffold1990 (17-55)||(914-952)
[»] scaffold0092 (1 HSPs)
scaffold0092 (17-55)||(47354-47392)
[»] scaffold0062 (1 HSPs)
scaffold0062 (4-57)||(7053-7106)
[»] scaffold1086 (1 HSPs)
scaffold1086 (7-75)||(2498-2566)
[»] scaffold0011 (1 HSPs)
scaffold0011 (23-75)||(19412-19464)


Alignment Details
Target: chr2 (Bit Score: 158; Significance: 3e-84; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 3 - 240
Target Start/End: Complemental strand, 44955384 - 44955146
Alignment:
Q  3 ttagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgat 102  Q
    ||||||||||||| |||||||||||||||||||||  | ||||||||||||||||||| ||||| ||||||||||| |||||||||  ||||||||||||    
T  44955384 ttagctcagttgttaggacaatgcattattatatgtcgcggttggggttcgaacctcggacaccccatttatttatcttatacagtaaattctagccgat 44955285  T
Q  103 aggttatctgacnnnnnnn-tacattaaaataacctaggaataattttacagtcttgttcaaagccaaaaattatttttattcttaattttaaattccag 201  Q
    || ||| || ||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44955284 agattacctcacaaaaaaaatacattaaaataacctaggaataattttacagtcttgttcaaagccaaaaattatttttattcttaattttaaattccag 44955185  T
Q  202 ggttgttcaacaaagcatcccacagcattcccatttcat 240  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  44955184 ggttgttcaacaaagcatcccacagcattccgatttcat 44955146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 44721792 - 44721682
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgata 103  Q
    |||||||||||  || ||||||||||||||||||||| ||| ||||||||||||||| ||||| |||||||| |  |||||  ||| |||||||||  ||    
T  44721792 tagctcagttggtagaacaatgcattattatatgcaggggtcggggttcgaacctcggacaccccatttattcaccttataaggtgaattctagccacta 44721693  T
Q  104 ggttatctgac 114  Q
    |||||||||||    
T  44721692 ggttatctgac 44721682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 22538549 - 22538617
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||||    
T  22538549 ctcagttggtaggacaatgcattattatatgcaggggttggggttcgaatcccgaacacctcacttatt 22538617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 36665437 - 36665517
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 84  Q
    ||||||||||   |||||||||||||||||||||||| ||  ||||||||||||||| ||||| || ||||| ||||||||    
T  36665437 tagctcagtttgtaggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttattcattttata 36665517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 2114523 - 2114452
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  || |||||||||||||||||| || ||| |||||||||||| || ||||||||||||||    
T  2114523 tagctcagttggtagaacaatgcattattatatgtaggggtcggggttcgaaccccggacacctcatttatt 2114452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 22297540 - 22297469
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||||||||||||||||||||||| ||  |||||||||||| || ||||| ||||||||    
T  22297540 tagctcagttggtaggacaatgcattattatatgcaggggcaggggttcgaaccccggacaccccatttatt 22297469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 23683716 - 23683795
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattcta 96  Q
    |||||||| |||||||||||| || ||||||||||||||||||  ||||| |||||||| || ||||| |||| ||||||    
T  23683716 aggacaatacattattatatgtaggggttggggttcgaacctcagacaccccatttattcatcttataaagtgaattcta 23683795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 36426944 - 36426849
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    ||||||| |||  ||||||||||||||||||||| || |||||||||||||||  |||||||| || ||||| || |||||  ||| |||||||||    
T  36426944 tagctcacttggtaggacaatgcattattatatgtaggggttggggttcgaactccgaacaccccacttattcatcttataaggtgaattctagcc 36426849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 32891619 - 32891677
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||||||| || |||||    
T  32891619 aggacaatgcattattatatgcaggggttggggttcgaaccctgaacaccccacttatt 32891677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 16028193 - 16028144
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaac 56  Q
    ||||||||  |||||||||||||||||||||||||||| |||||||||||    
T  16028193 ctcagttggtaggacaatgcattattatatgcagtggtcggggttcgaac 16028144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 24034141 - 24034080
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacac 65  Q
    ||||| |||||  |||||||||||||||||||||||| ||| ||||||||||||||| ||||    
T  24034141 tagcttagttggtaggacaatgcattattatatgcaggggtcggggttcgaacctcggacac 24034080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 32988357 - 32988450
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctag 97  Q
    |||||||||||  | ||||||||||||||||| |||| || |||||||||||| ||||||||| || |||||   |||||| |||| |||||||    
T  32988357 tagctcagttggtaagacaatgcattattatacgcaggggctggggttcgaacatcgaacaccccacttattctctttataaagtgaattctag 32988450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 9547215 - 9547115
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgata 103  Q
    |||||||||||  ||||||||| |||||||||||||| ||  |||||||||| | |||||||| || ||||| || |||||  ||| ||||||||| |||    
T  9547215 tagctcagttgataggacaatgtattattatatgcaggggccggggttcgaatcccgaacaccccacttattcatcttataaggtgaattctagccaata 9547116  T
Q  104 g 104  Q
    |    
T  9547115 g 9547115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 17239908 - 17239988
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 84  Q
    |||||||||||  || ||||||||||||||||||||| ||| ||| ||||||||||| ||||| || ||||| || |||||    
T  17239908 tagctcagttggtagaacaatgcattattatatgcaggggtcgggattcgaacctcggacaccccacttattcatcttata 17239988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 39726522 - 39726462
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaaca 64  Q
    |||||||||||  ||||||||||||||||||||| || ||| | |||||||||||||||||    
T  39726522 tagctcagttggtaggacaatgcattattatatgtaggggtcgaggttcgaacctcgaaca 39726462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 580871 - 580800
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  580871 tagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 580800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 9796918 - 9796997
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctag 97  Q
    ||||||||||||||||||||||| ||| |||||||||||| || ||||| || ||||| || |||||  ||| |||||||    
T  9796918 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcatcttataaggtgaattctag 9796997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 32943346 - 32943397
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaa 55  Q
    |||||||||||  |||||||||||||||||||||||| || |||||||||||    
T  32943346 tagctcagttggtaggacaatgcattattatatgcagaggctggggttcgaa 32943397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 36520868 - 36520797
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  ||||||||||||||||||||| || ||| |||||||||||| || ||||| || |||||    
T  36520868 tagctcagttggtaggacaatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttatt 36520797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 38820582 - 38820676
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||||||| ||||||||||||||||||||| || || ||||||| ||||| |  ||||| |||||||| || |||||  ||| |||||||||    
T  38820582 tagctcagttgttaggacaatgcattattatatgtaggggctggggtttgaacc-cagacaccccatttattcatcttataaggtgaattctagcc 38820676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 10262749 - 10262799
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||||  |||||||||||||||||||||||| ||| ||||||||||||    
T  10262749 ctcagttggtaggacaatgcattattatatgcaggggtcggggttcgaacc 10262799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 11133097 - 11133193
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgataggttatctgac 114  Q
    |||||||||||| |||||||||| ||| |||||||||||| || ||||| || ||||| |  |||||  ||| |||||||||  ||||||| |||||    
T  11133097 ggacaatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttattcaccttataaggtgaattctagccactaggttacctgac 11133193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 15392296 - 15392204
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    ||||||||  ||||||||||||||||||||| ||  |  | ||||||||||||| |||||||| ||||| | ||||||  ||||||| |||||    
T  15392296 ctcagttggtaggacaatgcattattatatgtaggagacgaggttcgaacctcggacacctcacttattcactttataaggtgtattttagcc 15392204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 25731956 - 25732012
Alignment:
Q  19 gacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||||||| ||| || |||||||||||| ||||| || |||||    
T  25731956 gacaatgcattattatatgcaggggtcggagttcgaacctcggacaccccacttatt 25732012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 27495549 - 27495605
Alignment:
Q  8 tcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaaca 64  Q
    |||||||  |||||||||||||||||||||||| ||||| | |||||||| ||||||    
T  27495549 tcagttggtaggacaatgcattattatatgcaggggttgagattcgaaccccgaaca 27495605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 32891288 - 32891368
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 84  Q
    |||||||||||  |||||||||||||||||||||||| ||| ||  |||||||| || ||||| || ||||| || |||||    
T  32891288 tagctcagttggtaggacaatgcattattatatgcaggggtcggttttcgaaccccggacaccccacttattcatcttata 32891368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 41699112 - 41699180
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||  |||| | ||||||||||||||||| ||| |||||||||||| |||||||| || |||||    
T  41699112 ctcagttggtaggatattgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttatt 41699180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 7086260 - 7086331
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  ||| |||||||||||||||||||| ||  ||| |||||||| |||||||| || |||||    
T  7086260 tagctcagttggtagggcaatgcattattatatgcaggggccgggattcgaaccccgaacaccccaattatt 7086331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 20122563 - 20122468
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||||||  ||||||||||||||||||||| || ||  |||||||||||| || ||||  || ||||| || |||||  ||| |||||||||    
T  20122563 tagctcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccggacacgccacttattcatcttataaggtgaattctagcc 20122468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 31956876 - 31956935
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||||||  ||||||||||||||||||||| || || ||||||||||||  ||||||||    
T  31956876 ctcagttggtaggacaatgcattattatatgtaggggctggggttcgaactccgaacacc 31956935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 38530285 - 38530230
Alignment:
Q  2 cttagctcagttgtgaggacaatgcattattatatgcagtgg-ttggggttcgaac 56  Q
    |||||||||||||  |||||||||||||||||||| ||| || |||||||||||||    
T  38530285 cttagctcagttggtaggacaatgcattattatatacaggggcttggggttcgaac 38530230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 17154669 - 17154727
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  17154669 aggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 17154727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 36481076 - 36481138
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    |||||||||||  |||||||||||||||||||||||  || ||| ||||||||| | ||||||    
T  36481076 tagctcagttggtaggacaatgcattattatatgcatgggctggagttcgaaccccaaacacc 36481138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 40044168 - 40044114
Alignment:
Q  4 tagctcagttg-tgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||||||| | ||||||||| |||||||||||||| ||| ||||||||||||    
T  40044168 tagctcagttggtaaggacaatgtattattatatgcaggggtcggggttcgaacc 40044114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 2304294 - 2304375
Alignment:
Q  2 cttagctcagttgtgagg-acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttatttta 82  Q
    |||||||||||||  ||| |||||| ||||||||||| || ||| |||||||||||| || ||||| || ||||||| ||||    
T  2304294 cttagctcagttggcagggacaatgtattattatatgtaggggtcggggttcgaaccccggacaccccacttatttacttta 2304375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 9802913 - 9802970
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||  ||| |||||||||||| || ||||| || |||||    
T  9802913 ggacaatgcattattatatgcaagggtcggggttcgaaccccggacaccccacttatt 9802970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 16973915 - 16973988
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttattta 77  Q
    ||||||||||   ||||||||| |||||||||||||| |||| || |||||||| || ||||| || |||||||    
T  16973915 tagctcagtttgtaggacaatggattattatatgcaggggttaggattcgaaccccggacaccccacttattta 16973988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 20208868 - 20208921
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  | |||||||||||||||||| ||| ||||| ||||||||||    
T  20208868 tagctcagttggtaagacaatgcattattatatacagaggttgaggttcgaacc 20208921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 25050328 - 25050275
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||| ||||||||||||||||||| ||| ||| ||||||||    
T  25050328 tagctcagttggtaggataatgcattattatatgcaggggtcgggattcgaacc 25050275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 29034997 - 29035054
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  29034997 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 29035054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 30474283 - 30474230
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||||||||||||||||||| ||  | ||||||||||    
T  30474283 tagctcagttggtaggacaatgcattattatatgcaggggccgaggttcgaacc 30474230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 34620525 - 34620578
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||| ||||  |||||||||||||||||||||||  |||||||||| |||||    
T  34620525 tagctcggttggtaggacaatgcattattatatgcaagggttggggtttgaacc 34620578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 45523676 - 45523737
Alignment:
Q  8 tcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctca 69  Q
    |||||||  ||||||||| || ||||||||||| ||| |||||||||||| | |||||||||    
T  45523676 tcagttggtaggacaatgtataattatatgcaggggtcggggttcgaaccccaaacacctca 45523737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 3179334 - 3179386
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctc 59  Q
    ||||||||  || ||||||||||||||||||||| ||| | ||||||||||||    
T  3179334 ctcagttggtagaacaatgcattattatatgcaggggtcgaggttcgaacctc 3179386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 10207652 - 10207692
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggt 44  Q
    |||||||||||  |||| |||||||||||||||||||||||    
T  10207652 tagctcagttggtaggataatgcattattatatgcagtggt 10207692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 18386900 - 18386848
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaac 56  Q
    ||||||| |||  ||||||||||||||||||||| || || ||||||||||||    
T  18386900 tagctcaattggtaggacaatgcattattatatgtaggggctggggttcgaac 18386848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 19905729 - 19905681
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||||||||||||||||| ||| ||| |||||||||||| || |||||    
T  19905729 ggacaatgcattattatatacaggggtcggggttcgaaccccggacacc 19905681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 40471179 - 40471231
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||| ||||||| |||||| | |||||||| || |||||    
T  40471179 atgcattattatatgcaggggttgggattcgaatcccgaacaccccacttatt 40471231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 48110536 - 48110616
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 84  Q
    |||||||||||  || ||||||||||||||||||||| |||||| |||||||||||| |||||||| ||||| || |||||    
T  48110536 tagctcagttggtagaacaatgcattattatatgcaggggttggagttcgaacctcggacacctcacttattcatcttata 48110616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 15368812 - 15368907
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||||||  |||||||||||||||||||||||| ||  |||||||||||| || ||||| || ||||| ||||||||  ||| |||||||||    
T  15368812 tagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcattttataaggtgaattctagcc 15368907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 4429570 - 4429517
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||||||||    
T  4429570 tagctcagttggtaggacaatgcattattatatgcaggggttggggttcgaacc 4429517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 11802105 - 11802037
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||  ||||||||||||||||||||| || |||||||||||||||| || |||| |||||||||    
T  11802105 ctcagttggtaggacaatgcattattatatgtaggggttggggttcgaaccccggacacttcatttatt 11802037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 4354193 - 4354098
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||||||  |||||||||||||||||||||||| ||  ||||||||||| ||| ||||| || ||||| |  ||||| |||| |||||||||    
T  4354193 tagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaacttcggacaccccacttattcaccttataaagtgaattctagcc 4354098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 23930628 - 23930537
Alignment:
Q  8 tcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||  |||||||||||||||||||||||| ||| ||||||||||||  | ||||| ||||||||||  ||||| |||| | |||||||    
T  23930628 tcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccctggacaccccatttatttaccttataaagtgaactctagcc 23930537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 37733762 - 37733833
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||||||||||||||||||||||||||  |||||||||||| || ||||| || |||||    
T  37733762 tagctcagttggtaggacaatgcattattatatgcagtggacggggttcgaaccccggacaccccacttatt 37733833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 16110108 - 16110055
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||||||||||||||||||| ||||| ||||||||||    
T  16110108 tagctcagttgataggacaatgcattattatatgcaggggttgaggttcgaacc 16110055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 43020637 - 43020680
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    |||||||||||||||||| ||||||||||||||||||| |||||    
T  43020637 atgcattattatatgcaggggttggggttcgaacctcggacacc 43020680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 18923973 - 18923911
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    |||||||||||  |||||||||||||||||||||||| | |  |||||||||||||| |||||    
T  18923973 tagctcagttggtaggacaatgcattattatatgcagggttcagggttcgaacctcggacacc 18923911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 20357470 - 20357520
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||||  |||||||||||||||||||||||| || |||||||||||||    
T  20357470 ctcagttggtaggacaatgcattattatatgcaggggctggggttcgaacc 20357520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 20562485 - 20562435
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||||  |||||||||||||||||||||||| || |||||||||||||    
T  20562485 ctcagttggtaggacaatgcattattatatgcaggggctggggttcgaacc 20562435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 49251480 - 49251430
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||||  |||||||||||||||||||||||| ||| ||||||||||||    
T  49251480 ctcagttggtaggacaatgcattattatatgcaggggtcggggttcgaacc 49251430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 5315594 - 5315643
Alignment:
Q  29 tattatatgcagtggttggggttcgaacctcgaacacctcatttatttat 78  Q
    |||||||||||| |||||||||||||||| | || |||||||||||||||    
T  5315594 tattatatgcagaggttggggttcgaaccccaaatacctcatttatttat 5315643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 29491491 - 29491548
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||| |||||||||||| || ||||| || |||||    
T  29491491 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttatt 29491548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 49010788 - 49010715
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttattta 77  Q
    |||||||||||  ||||||||| |||||||||||||   |||||||||||||  ||||||| |||| |||||||    
T  49010788 tagctcagttggtaggacaatgtattattatatgcatgagttggggttcgaatttcgaacatctcacttattta 49010715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 8227977 - 8228025
Alignment:
Q  27 attattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||| ||||||| ||||||||  ||||||||||||||||    
T  8227977 attattatatgcaggggttgggattcgaaccctgaacacctcatttatt 8228025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 11907376 - 11907328
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  11907376 ggacaatgcattattatatgcagaggccggggttcgaaccccgaacacc 11907328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 15774397 - 15774329
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||  ||||||||||||||||||||| || ||| |||||||||||| || ||||| || |||||    
T  15774397 ctcagttggtaggacaatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttatt 15774329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 23464070 - 23463978
Alignment:
Q  8 tcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccg 100  Q
    |||||||  |||||||||||||||||||||||| ||  |||||||||||| || ||||| || || || | ||||||  ||| ||||||||||    
T  23464070 tcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttgttcactttataaggtgaattctagccg 23463978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 30649101 - 30649153
Alignment:
Q  5 agctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||||||  ||||||| ||||||||||||||||  |||||||||||||||    
T  30649101 agctcagttgataggacaacgcattattatatgcaggagttggggttcgaacc 30649153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 17871167 - 17871107
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    |||||||||||  |||||||||||||||||||||||  ||  |||||||||||| ||||||||    
T  17871167 tagctcagttgataggacaatgcattattatatgca--gggcggggttcgaaccccgaacacc 17871107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 27745164 - 27745235
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||| |||  |||| ||||||||||||||||||| | | |||||||||||| || ||||| ||||||||    
T  27745164 tagctcatttggtaggaaaatgcattattatatgcagggatcggggttcgaaccccggacaccccatttatt 27745235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 29331252 - 29331157
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    ||||| |||||  |||||||||||||||||||||||| |   ||| ||||||||||| |||||  |||||||||  |||||  ||| |||||||||    
T  29331252 tagcttagttggtaggacaatgcattattatatgcagggtccgggattcgaacctcggacaccctatttatttacattataaggtgaattctagcc 29331157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 42831954 - 42832025
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||||| ||||||||||||||||| || |||||||| |||| || ||||| || |||||    
T  42831954 tagctcagttggtaggacattgcattattatatgcaggggctggggttcaaaccccggacaccccacttatt 42832025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 43555962 - 43555867
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||||||  |||||||||||||||||||||||| | | ||||||| ||||  | ||||| || |||||||  |||||  ||| |||||||||    
T  43555962 tagctcagttggtaggacaatgcattattatatgcagggatcggggttcaaacccaggacaccccacttatttaccttataaggtggattctagcc 43555867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 46116262 - 46116191
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||| |||||  ||||||||||||||| |||||||| || ||||||||||||| || ||||| || |||||    
T  46116262 tagcttagttggtaggacaatgcattatcatatgcaggggctggggttcgaaccccggacaccccaattatt 46116191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 49606786 - 49606715
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||| ||||||||||||||||||||| || ||  || |||||||| ||| ||||| || |||||    
T  49606786 tagctcagttgttaggacaatgcattattatatgtaggggccggagttcgaacttcggacaccccacttatt 49606715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 23758321 - 23758279
Alignment:
Q  24 tgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||    
T  23758321 tgcattattatatgcaggggttgaggttcgaaccccgaacacc 23758279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 49916460 - 49916542
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    ||||||||||||||||||||| || ||| |||||||||| | || ||| | |||||||| || |||||  ||| |||||||||    
T  49916460 aggacaatgcattattatatgtaggggtcggggttcgaatcccggacatcccatttattcatattataaggtgaattctagcc 49916542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 749658 - 749621
Alignment:
Q  20 acaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||||||||| || ||||||||||||||||    
T  749658 acaatgcattattatatgtaggggttggggttcgaacc 749621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 8865252 - 8865171
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagc 98  Q
    |||| ||||||||||||||||||  | ||| ||||||||||  ||||||| || |||||||| |||||  ||| ||||||||    
T  8865252 aggataatgcattattatatgcaaggattgaggttcgaacccagaacaccccacttatttatcttataaggtgaattctagc 8865171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 11213537 - 11213444
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctag 97  Q
    |||||||||||  |  ||||| |||||||||||| || |||||| ||||||||| || ||||| || ||||||| ||||||  ||| |||||||    
T  11213537 tagctcagttggtaaaacaatacattattatatgtagaggttggagttcgaaccccggacaccccacttatttactttataaggtgaattctag 11213444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 11405477 - 11405534
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||| |||||||||| ||| |||||||||||| || ||||| || |||||    
T  11405477 ggacaatgcattgttatatgcaggggtcggggttcgaaccccggacaccccacttatt 11405534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 17350082 - 17350139
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  17350082 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 17350139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 43092173 - 43092222
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    |||| ||| ||||||||||||||| ||| ||||||||||||||| |||||    
T  43092173 aggataatacattattatatgcaggggtcggggttcgaacctcggacacc 43092222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 52833180 - 52833123
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||| | ||||||||    
T  52833180 ggacaatgcattattatatgcaggggccggggttcgaaccccggacatcccatttatt 52833123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 2903096 - 2903044
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||| |||||||||| ||| |||||||||||| |||||||| || |||||    
T  2903096 atgcattgttatatgcagaggtcggggttcgaaccccgaacaccccacttatt 2903044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 5172690 - 5172654
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcag 40  Q
    |||||||||||  ||||||||||||||||||||||||    
T  5172690 tagctcagttgataggacaatgcattattatatgcag 5172654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 5680737 - 5680777
Alignment:
Q  22 aatgcattattatatgcagtggttggggttcgaacctcgaa 62  Q
    |||||||||||||||| || ||| |||||||||||||||||    
T  5680737 aatgcattattatatgtaggggtcggggttcgaacctcgaa 5680777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 8261763 - 8261715
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttc 52  Q
    |||||||||||  |||| ||||||||||||||||||| ||| |||||||    
T  8261763 tagctcagttggtaggataatgcattattatatgcaggggtcggggttc 8261715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 17056955 - 17056915
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||||||||||||||| ||  ||||||||||||    
T  17056955 aggacaatgcattattatatgcaggggccggggttcgaacc 17056915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 28564379 - 28564343
Alignment:
Q  30 attatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  28564379 attatatgcaggggttggggttcgaacctcggacacc 28564343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 31965538 - 31965590
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||| | | |||||||||||  ||||||||||| |||||    
T  31965538 atgcattattatatgcagggatcggggttcgaactccgaacacctcacttatt 31965590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 35619081 - 35619025
Alignment:
Q  19 gacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||| |||||||||||||| || ||| |||||||||||| |||||| | ||||||||    
T  35619081 gacattgcattattatatgtaggggtcggggttcgaaccccgaacatcccatttatt 35619025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 37490900 - 37490992
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    ||||||||  |||||||||||||||||||||||| ||  ||||| |||||| || ||||| |  ||||| || |||||  ||| |||||||||    
T  37490900 ctcagttggtaggacaatgcattattatatgcaggggccggggtacgaaccacggacaccccgcttattcatcttataaggtgaattctagcc 37490992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 38020036 - 38020000
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcag 40  Q
    |||||||||||  ||||||||||||||||||||||||    
T  38020036 tagctcagttggtaggacaatgcattattatatgcag 38020000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 40814839 - 40814803
Alignment:
Q  19 gacaatgcattattatatgcagtggttggggttcgaa 55  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  40814839 gacaatgcattattatatgcaggggtcggggttcgaa 40814803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 6978831 - 6978922
Alignment:
Q  8 tcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||  |||| ||||||||||||||||||| |||||||||||||||| |||||||  |||||||| |  ||||| |||| |||||||||    
T  6978831 tcagttgataggataatgcattattatatgcaggggttggggttcgaaccacgaacactccatttattcaccttataaagtgaattctagcc 6978922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 24074514 - 24074584
Alignment:
Q  5 agctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||  ||||||||||||||||||||| || |||||  |||||||||||| |||||||| |||||    
T  24074514 agctcagttggtaggacaatgcattattatatgtaggggttgaagttcgaacctcggacacctcacttatt 24074584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 43847709 - 43847771
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    |||||||||||  |||||||||||||||||||||||| ||  |||||||||||| ||||||||    
T  43847709 tagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccgaacacc 43847771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 6064398 - 6064455
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| |||| ||| |||||    
T  6064398 ggacaatgcattattatatgcaggggtcggggttcgaacctcggacacttcacttatt 6064455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 6970718 - 6970674
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaa 62  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  6970718 ggacaatgcattattatatgcagaagttggggttcgaacctcgaa 6970674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 23857412 - 23857316
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgca-gtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||||||  ||||||||||||||||||||||| | ||  ||||||||||||||| |||||  | ||||| || |||||| ||| |||||||||    
T  23857412 tagctcagttggtaggacaatgcattattatatgcagggggccggggttcgaacctcggacacccgacttattcatcttatacggtgaattctagcc 23857316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 25119228 - 25119268
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  25119228 aggacaatgcattattatatgcaggggttggggttcgaacc 25119268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 25139971 - 25139915
Alignment:
Q  8 tcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaaca 64  Q
    |||||||| || ||||||||||||||||||||| ||| |||||||||||| ||||||    
T  25139971 tcagttgttagaacaatgcattattatatgcaggggtcggggttcgaaccccgaaca 25139915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 26703975 - 26703907
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||  |||||||||||||||||||||||  ||| |||||||||| | ||||||||||| |||||    
T  26703975 ctcagttggtaggacaatgcattattatatgcaagggtcggggttcgaatcccgaacacctcacttatt 26703907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 30942674 - 30942614
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttattta 77  Q
    |||||||||||||||||||||||| ||  |||||||||||| |||||||| || |||||||    
T  30942674 aggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttattta 30942614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 7649536 - 7649606
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||| |||  ||||||||||||||||||||| || || |||||||||||||||||||||| || |||||    
T  7649536 tagctcacttggtaggacaatgcattattatatgtag-ggctggggttcgaacctcgaacaccccacttatt 7649606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 10970273 - 10970344
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||| ||||||||||||||||||| || |||||||| |||| |||||||| || |||||    
T  10970273 tagctcagttggtaggataatgcattattatatgcaggggctggggttcaaaccccgaacaccccacttatt 10970344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 12560060 - 12560111
Alignment:
Q  26 cattattatatgcagtggttggggttcgaacctcgaacacctcatttattta 77  Q
    |||| |||||||||| |||||||||||||||||| ||||||||| |||||||    
T  12560060 cattgttatatgcaggggttggggttcgaacctcaaacacctcacttattta 12560111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 15042453 - 15042382
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  15042453 tagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 15042382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 13702423 - 13702369
Alignment:
Q  21 caatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||||| ||| ||||||||||||||  |||||||| |||||    
T  13702423 caatgcattattatatgcaggggtcggggttcgaacctcagacacctcacttatt 13702369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 1588788 - 1588845
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||  ||||||||||||||| ||||| || |||||    
T  1588788 ggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttatt 1588845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 5184975 - 5184922
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  ||||||||| |||||||||||||| || |||||||||||||    
T  5184975 tagctcagttggtaggacaatggattattatatgcaggggctggggttcgaacc 5184922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 9524964 - 9525017
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||||||||||||||||||| ||  ||||||||||||    
T  9524964 tagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaacc 9525017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 24608571 - 24608518
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||||||||||||||||||| ||  ||||||||||||    
T  24608571 tagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaacc 24608518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 42688067 - 42688136
Alignment:
Q  8 tcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttattta 77  Q
    |||||||  ||||||||||||||||||||| || ||| ||| |||||||| |||||||| || |||||||    
T  42688067 tcagttggtaggacaatgcattattatatgtaggggtcgggattcgaaccccgaacaccccacttattta 42688136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 2376538 - 2376586
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacac 65  Q
    |||||||||||||||||||||||| |||  |||||||||||||| ||||    
T  2376538 aggacaatgcattattatatgcaggggtccgggttcgaacctcggacac 2376586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 5323944 - 5324000
Alignment:
Q  19 gacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||||||| ||| |||||||||||| || || ||||| |||||    
T  5323944 gacaatgcattattatatgcaggggtcggggttcgaaccccggactcctcagttatt 5324000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 7603751 - 7603787
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcg 53  Q
    |||||||||||||||||||||||||||| ||||||||    
T  7603751 aggacaatgcattattatatgcagtggtcggggttcg 7603787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 1033048 - 1032978
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||   ||||||||||||||||||||||| ||| || ||||||||| |||||||| || |||||    
T  1033048 tagctcagttggtgggacaatgcattattatatgcaggggtcggagttcgaacc-cgaacaccccacttatt 1032978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 4293904 - 4293943
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  4293904 ggacaatgcattattatatgcaggggtcggggttcgaacc 4293943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 4798629 - 4798558
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||| ||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  4798629 tagctcagttggtaggataatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 4798558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 27868713 - 27868784
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  || | ||| ||||||||||||||| |||||| ||||||| |||||||| | ||||||||    
T  27868713 tagctcagttggtagaataatacattattatatgcaggggttggtgttcgaatctcgaacatcccatttatt 27868784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 39484458 - 39484407
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaa 55  Q
    |||||||||||  |||||||||||||||||||||||| ||  ||||||||||    
T  39484458 tagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaa 39484407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 2282597 - 2282547
Alignment:
Q  32 tatatgcagtggttggggttcgaacctcgaacacctcatttatttatttta 82  Q
    |||||| || ||||| |||||||| ||||||||||||| ||||||||||||    
T  2282597 tatatgtagaggttgaggttcgaatctcgaacacctcacttatttatttta 2282547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 8034550 - 8034608
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||||  |  |||||||||||| |||||||| || |||||    
T  8034550 aggacaatgcattattatatgcaggagccggggttcgaaccccgaacaccccacttatt 8034608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 10199817 - 10199759
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||||||||| ||  |||||||||||| | |||||| || |||||    
T  10199817 aggacaatgcattattatatgcaggggccggggttcgaaccccaaacaccccacttatt 10199759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 17980289 - 17980351
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    |||||||||||  ||||||| |||||||||||||||| ||  |||||||||||| || |||||    
T  17980289 tagctcagttggtaggacaaagcattattatatgcaggggccggggttcgaaccccggacacc 17980351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 35301237 - 35301199
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaac 56  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  35301237 ggacaatgcattattatatgcaggggtcggggttcgaac 35301199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 35556474 - 35556412
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||| |||||  |||||||||||||| |||||| || |||||||||||||||| || |||||    
T  35556474 tagcttagttggtaggacaatgcattagtatatgtaggggttggggttcgaaccccggacacc 35556412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 43468793 - 43468683
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgata 103  Q
    |||||||||||  ||||||||||||| ||||||| || ||| |||||||||||  || ||||| || ||||| |  |||||  ||| |||||||||  ||    
T  43468793 tagctcagttggtaggacaatgcattgttatatgtaggggtcggggttcgaactccggacaccccacttattcaccttataaggtgaattctagccacta 43468694  T
Q  104 ggttatctgac 114  Q
    || ||||||||    
T  43468693 ggctatctgac 43468683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 2696554 - 2696611
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  2696554 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 2696611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 2800040 - 2800097
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  2800040 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 2800097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 8682388 - 8682441
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||| | ||||||||||||| |||||| |||||||||    
T  8682388 tagctcagttggtaggacaattctttattatatgcaggggttggagttcgaacc 8682441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 10292373 - 10292430
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| || || | ||||||||||| ||||| || |||||    
T  10292373 ggacaatgcattattatatgcaggggctgagattcgaacctcggacaccccacttatt 10292430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 12676271 - 12676308
Alignment:
Q  29 tattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  12676271 tattatatgcagaggttggggttcgaaccccgaacacc 12676308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 22426422 - 22426479
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||||| || ||||| |||||||||| |  ||||| ||||||||    
T  22426422 ggacaatgcattattatatgtaggggttgaggttcgaacccctgacaccccatttatt 22426479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 28465625 - 28465670
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttgggg 49  Q
    |||||||||||  |||||||||||||||||||||||| || |||||    
T  28465625 tagctcagttggtaggacaatgcattattatatgcaggggctgggg 28465670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 33570503 - 33570446
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||| |||||||||  ||| ||||||||||||||| ||||| || |||||    
T  33570503 ggacaatgcattgttatatgcatgggtcggggttcgaacctcggacaccccacttatt 33570446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 40249965 - 40249916
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaac 56  Q
    ||||||||  |||||||||||||||||||||||||| | || ||||||||    
T  40249965 ctcagttggtaggacaatgcattattatatgcagtgatcggagttcgaac 40249916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 41089238 - 41089173
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctca 69  Q
    ||||| |||||  |||||||||||||||||||||||| ||| |||||| ||||  || ||||||||    
T  41089238 tagcttagttggtaggacaatgcattattatatgcaggggtcggggtttgaacaccggacacctca 41089173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 42523916 - 42523883
Alignment:
Q  1 acttagctcagttgtgaggacaatgcattattat 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  42523916 acttagctcagttgttaggacaatgcattattat 42523883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 7540563 - 7540523
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||||||||||||||| ||| ||||||| ||||    
T  7540563 aggacaatgcattattatatgcaggggtcggggttctaacc 7540523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 10573136 - 10573172
Alignment:
Q  29 tattatatgcagtggttggggttcgaacctcgaacac 65  Q
    |||||||||||| |||||||||||||||| |||||||    
T  10573136 tattatatgcaggggttggggttcgaaccccgaacac 10573172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 25470915 - 25470863
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||| ||  ||| ||||||||||||||| ||||| ||||||||    
T  25470915 atgcattattatattcatgggtcggggttcgaacctcggacaccccatttatt 25470863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 37219515 - 37219583
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||  ||||||||  ||||||||||||||  |||||||||| |||| || ||||| ||||||||    
T  37219515 ctcagttggtaggacaatatattattatatgcaggtgttggggttcaaaccccggacaccccatttatt 37219583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 41225753 - 41225701
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatg-cagtggttggggttcgaa 55  Q
    |||||||||||  |||||||||||||||||||||  || ||||||||||||||    
T  41225753 tagctcagttggtaggacaatgcattattatatgtaaggggttggggttcgaa 41225701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 7263086 - 7262991
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||||||  ||||||||||||||||||||| || |||||| ||||||||| ||||||||  ||||||| || |||||  ||| |||||||||    
T  7263086 tagctcagttggtaggacaatgcattattatatgtagaggttggagttcgaaccccgaacaccctatttattcatcttataaggtgaattctagcc 7262991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 27047803 - 27047732
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||||||||||||||||||||||| ||  ||||||||||||||| ||||| ||||||||    
T  27047803 tagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccatttatt 27047732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 30699822 - 30699871
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||    
T  30699822 aggacaatgcattattatatgtaggggttggggttcgaacctcgaacacc 30699871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 46716340 - 46716413
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttattta 77  Q
    |||||||||||  |||||||||||||||||||||||| ||| ||||||||||||  ||||||| || |||||||    
T  46716340 tagctcagttggtaggacaatgcattattatatgcagaggtcggggttcgaaccctgaacaccccacttattta 46716413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 30152746 - 30152819
Alignment:
Q  2 cttagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||  ||||||||||||||||||||  || ||| |||||||||||| |||||||| || |||||    
T  30152746 cttagctcagttggtaggacaatgcattattatatataggggtcggggttcgaaccccgaacaccccacttatt 30152819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 38025348 - 38025404
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcg 60  Q
    ||||||| |||  ||||||||||||||||||||||||  ||||||||||||||||||    
T  38025348 tagctcatttgataggacaatgcattattatatgcaggagttggggttcgaacctcg 38025404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 24304355 - 24304300
Alignment:
Q  20 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||| ||| |||||||||||  |||||||| ||||||||    
T  24304355 acaatgcattattatatgcaggggtcggggttcgaactccgaacaccccatttatt 24304300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 36316062 - 36315991
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||| ||||||||||||||||||| ||  ||||||||||||||| ||||| || |||||    
T  36316062 tagctcagttggtaggataatgcattattatatgcaggggccggggttcgaacctcggacaccccacttatt 36315991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 2366367 - 2366416
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaac 56  Q
    ||||||||  |||||||||||||||||||||||| ||| |||||||||||    
T  2366367 ctcagttgataggacaatgcattattatatgcaggggtcggggttcgaac 2366416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 23685642 - 23685589
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||||||||||||||||||| ||  ||||||||||||    
T  23685642 tagctcagttgataggacaatgcattattatatgcaggggccggggttcgaacc 23685589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 34962060 - 34962007
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  ||||||||||||||||||||||||| | |||| ||||||||    
T  34962060 tagctcagttggtaggacaatgcattattatatgcagtagctgggattcgaacc 34962007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 48525599 - 48525655
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||| ||||||||||| |||||||||||||||| || |||||||| |||||    
T  48525599 ggacaatgcat-attatatgcaggggttggggttcgaaccccggacacctcacttatt 48525655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 35195869 - 35195921
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||| ||  |||||||||||| |||||||| ||||||||    
T  35195869 atgcattattatatgcaggggccggggttcgaaccccgaacaccccatttatt 35195921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 43970938 - 43970878
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacct 67  Q
    ||||||||  || |||||||||||||||||||||  |  ||||||||||||||||||||||    
T  43970938 ctcagttggtagaacaatgcattattatatgcagaagacggggttcgaacctcgaacacct 43970878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 45198183 - 45198115
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||  |||| ||||||||||||||||||||| ||| | |||||||| || ||||| ||||||||    
T  45198183 ctcagttggtaggataatgcattattatatgcagtgattgagattcgaaccccggacaccccatttatt 45198115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 34948113 - 34948184
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  ||||||||||||||| |||||||||||  | |||||||||| || ||||| || |||||    
T  34948113 tagctcagttggtaggacaatgcattatcatatgcagtggccgaggttcgaaccccggacaccccacttatt 34948184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 42887161 - 42887256
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||||||  | |||||| ||||||||||||||| || || |||||||||| || ||||| || |||||||  |||||  ||| |||||||||    
T  42887161 tagctcagttggtacgacaattcattattatatgcaggggctgaggttcgaaccccggacaccccacttatttaccttataaggtgaattctagcc 42887256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 14967719 - 14967657
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctca 69  Q
    ||||||||  ||||||||||||||||||||| || ||| |||||| |||||||  ||||||||    
T  14967719 ctcagttggtaggacaatgcattattatatgtaggggtcggggtttgaacctcagacacctca 14967657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 15397195 - 15397133
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctca 69  Q
    ||||||||  ||||||||||||||||||||| || ||| |||||| |||||||  ||||||||    
T  15397195 ctcagttggtaggacaatgcattattatatgtaggggtcggggtttgaacctcagacacctca 15397133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 22741210 - 22741307
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggt--tggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||| ||||  ||||||||||||||||||||||||| ||   |||||||||| |||| ||||| || ||||| || |||||  ||| |||||||||    
T  22741210 tagctcggttggtaggacaatgcattattatatgcagtagtcagggggttcgaatctcggacaccccacttattcatcttataaggtgaattctagcc 22741307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 24396955 - 24397005
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||||  |||||||||||||||||||||||| ||| || |||||||||    
T  24396955 ctcagttggcaggacaatgcattattatatgcaggggtcggagttcgaacc 24397005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 25818296 - 25818354
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacac 65  Q
    ||||||||  |||| ||||||||||||||||||| || ||| ||||||||| |||||||    
T  25818296 ctcagttggtaggataatgcattattatatgcaggggctggagttcgaaccccgaacac 25818354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 39524714 - 39524767
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttattta 77  Q
    ||||||| |||||||||| ||||| |||||||| | |||||||||||||||||||    
T  39524714 atgcattgttatatgcaggggttgaggttcgaatc-cgaacacctcatttattta 39524767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 44437913 - 44437851
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||||||||   |||||||||||||||||||||||| ||  |||||||||||| || |||||    
T  44437913 tagctcagttagtaggacaatgcattattatatgcaggggccggggttcgaaccccggacacc 44437851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 47552220 - 47552282
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    |||||||||||  |||||||||||||||||||||||  ||  |||||||||||| || |||||    
T  47552220 tagctcagttggtaggacaatgcattattatatgcaagggccggggttcgaaccccggacacc 47552282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 924380 - 924327
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||| | |||||||||||||| || ||||||||||||||||    
T  924380 tagctcagttggtaggatagtgcattattatatgtaggggttggggttcgaacc 924327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 10020538 - 10020497
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacctcgaaca 64  Q
    ||||||| |||||||||| |||||||||||||||| ||||||    
T  10020538 atgcattgttatatgcaggggttggggttcgaaccccgaaca 10020497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 15912798 - 15912835
Alignment:
Q  20 acaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  15912798 acaatgcattgttatatgcaggggttggggttcgaacc 15912835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 20527503 - 20527446
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||| |||||||||| ||  || ||||||||| ||||||||||| |||||    
T  20527503 ggacaatgcattgttatatgcaggggccggagttcgaaccccgaacacctcacttatt 20527446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 25711216 - 25711139
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 84  Q
    ||||||||  |||| |||||||||||||||| || ||  ||||||||||||||| ||||| || ||||| | ||||||    
T  25711216 ctcagttgataggataatgcattattatatgtaggggccggggttcgaacctcggacaccccacttattcactttata 25711139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 30644176 - 30644229
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||||||||||||||||||| ||  || |||||||||    
T  30644176 tagctcagttggtaggacaatgcattattatatgcaggggccggtgttcgaacc 30644229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 41139108 - 41139145
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaa 55  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  41139108 ggacaatgcattattatatgcaggggtcggggttcgaa 41139145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 46337952 - 46337903
Alignment:
Q  8 tcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||  |||||||||||||||||||||||| | | ||||||||||||    
T  46337952 tcagttggtaggacaatgcattattatatgcagggatcggggttcgaacc 46337903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 4590694 - 4590658
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcag 40  Q
    |||||||||||  ||||||||||||||||||||||||    
T  4590694 tagctcagttggtaggacaatgcattattatatgcag 4590658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 21086111 - 21086147
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcag 40  Q
    |||||||||||  ||||||||||||||||||||||||    
T  21086111 tagctcagttggtaggacaatgcattattatatgcag 21086147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 22047527 - 22047563
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcag 40  Q
    |||||||||||  ||||||||||||||||||||||||    
T  22047527 tagctcagttggtaggacaatgcattattatatgcag 22047563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 4e-16; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 18872528 - 18872599
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||||||||||||||||||||||| ||| |||||||||||| |||||||| || |||||    
T  18872528 tagctcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttatt 18872599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 27440386 - 27440324
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    |||||||||||  |||||||||||||||||||||||||||| | |||||||||| ||||||||    
T  27440386 tagctcagttggtaggacaatgcattattatatgcagtggtcgaggttcgaaccccgaacacc 27440324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 3102201 - 3102120
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||||||| ||||||| ||  || |||||||||||| |||||||| |||||||||| |||||| |||| |||||||||    
T  3102201 ggacaatgcattgttatatgtaggagtcggggttcgaaccccgaacaccccatttatttactttataaagtgaattctagcc 3102120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 19982336 - 19982256
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 84  Q
    |||||| ||||  |||| ||||||||||||||||||| |||||  ||||||||| |||||||| ||||||||||| |||||    
T  19982336 tagctcggttgataggataatgcattattatatgcaggggttgaagttcgaaccccgaacaccccatttatttatcttata 19982256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 77
Target Start/End: Complemental strand, 7147088 - 7147034
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttattta 77  Q
    |||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||    
T  7147088 atgcattattatatgcaggggtcggggttcgaacctctgacacctcatttattta 7147034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 32158504 - 32158431
Alignment:
Q  2 cttagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||| |||  |||||||||||||||||||||||| ||  |||||||||||| |||||||| || |||||    
T  32158504 cttagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttatt 32158431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 14487572 - 14487624
Alignment:
Q  8 tcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcg 60  Q
    |||||||  ||||||||||||||||||||| || |||||||||||||||||||    
T  14487572 tcagttggtaggacaatgcattattatatgtaggggttggggttcgaacctcg 14487624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 42801529 - 42801449
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 84  Q
    |||||||||||  | || ||||||||||||||||||| ||| |||||||||||| || |||||||| ||||| || |||||    
T  42801529 tagctcagttggtatgataatgcattattatatgcaggggtcggggttcgaaccccggacacctcacttattcatcttata 42801449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 26169097 - 26169047
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||||  |||||||||||||||||||||||| |||||| |||||||||    
T  26169097 ctcagttggtaggacaatgcattattatatgcaggggttggagttcgaacc 26169047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 2029203 - 2029106
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgataggttatctgac 114  Q
    ||||||||| |||||||||||||| ||| ||| |||||||| |||||||| || ||||| |  |||||  ||| |||||||||  |||| ||||||||    
T  2029203 aggacaatgtattattatatgcaggggtcgggattcgaaccccgaacaccccacttattcaccttataaggtgaattctagccactaggctatctgac 2029106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 4674889 - 4674832
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||| |||||||||||| || ||||| || |||||    
T  4674889 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttatt 4674832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 6447554 - 6447497
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||  ||||||||||||||| ||||| || |||||    
T  6447554 ggacaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttatt 6447497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 9409024 - 9408967
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||| |||||||||| ||| || ||||||||| || ||||||||||||||    
T  9409024 ggacaatgcattgttatatgcaggggtcggagttcgaaccccggacacctcatttatt 9408967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 21017694 - 21017641
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  ||||||||||||||||||||| ||||| ||||||| |||||    
T  21017694 tagctcagttggtaggacaatgcattattatatgtagtggctggggtttgaacc 21017641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 28378135 - 28378082
Alignment:
Q  22 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||| || |||||||||||||||| |||||||| || |||||    
T  28378135 aatgcattattatatgtaggggttggggttcgaaccccgaacaccccacttatt 28378082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 6614110 - 6614046
Alignment:
Q  20 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 84  Q
    ||||||||||||||||||||| ||  ||||||||||||||| ||||| || ||||| || |||||    
T  6614110 acaatgcattattatatgcaggggccggggttcgaacctcggacaccccacttattcatcttata 6614046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 31934960 - 31934892
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||  |||||||||||||||||||||||| | ||| ||||||||  ||| ||||| ||||||||    
T  31934960 ctcagttggtaggacaatgcattattatatgcagagattgaggttcgaatttcggacaccccatttatt 31934892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 36045206 - 36045151
Alignment:
Q  20 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||| ||| |||||||||||| || ||||| || |||||    
T  36045206 acaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttatt 36045151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 72
Target Start/End: Complemental strand, 4418383 - 4418334
Alignment:
Q  22 aatgcattattatatgcagtggttggggttcgaacctcgaacacctcattt 72  Q
    |||||||| |||||||||| || |||||||||||||||| |||||||||||    
T  4418383 aatgcatt-ttatatgcaggggctggggttcgaacctcggacacctcattt 4418334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 9963437 - 9963475
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaac 56  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  9963437 ggacaatgcattgttatatgcaggggttggggttcgaac 9963475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 99
Target Start/End: Original strand, 10943740 - 10943818
Alignment:
Q  21 caatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||||||||||||||| ||  |||||||||||| || ||||| || ||||| | |||| | |||| |||||||||    
T  10943740 caatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaaagtgaattctagcc 10943818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 29144147 - 29144201
Alignment:
Q  2 cttagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaac 56  Q
    |||| ||||||||  |||||||||||||||||||||||| ||| |||||| ||||    
T  29144147 cttaactcagttggtaggacaatgcattattatatgcaggggtcggggtttgaac 29144201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 33800903 - 33800953
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||||  |||||||||||||||||||||||| ||  ||||||||||||    
T  33800903 ctcagttggtaggacaatgcattattatatgcaggggccggggttcgaacc 33800953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 39760094 - 39760152
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||| |||||||||||||| |||||| ||| ||||| |||||| | ||||||||    
T  39760094 aggacaatgtattattatatgcaggggttggagtttgaaccccgaacatcccatttatt 39760152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 40339187 - 40339133
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacct 58  Q
    ||||||||||   |||||||||||||||||||||||| ||  |||||||||||||    
T  40339187 tagctcagttagtaggacaatgcattattatatgcaggggccggggttcgaacct 40339133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 1463892 - 1463949
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  1463892 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 1463949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 13754016 - 13754093
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 84  Q
    ||||||||  |||||||| ||||||||||||||| ||| |  |||||||| ||| ||||| |||||||| || |||||    
T  13754016 ctcagttggtaggacaatacattattatatgcaggggtcgatgttcgaacgtcggacaccccatttattcatcttata 13754093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 18478010 - 18478063
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||||||||||||||||| | ||  ||||||||||||    
T  18478010 tagctcagttggtaggacaatgcattattatatgctggggccggggttcgaacc 18478063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 19059092 - 19059039
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  ||||||||||||||| |||||||| ||  ||||||||||||    
T  19059092 tagctcagttggtaggacaatgcattatcatatgcaggggccggggttcgaacc 19059039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 29050807 - 29050876
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcattta 73  Q
    |||||||||||  |||||||||||||||||||||||| ||  |||||| ||||  || ||||| ||||||    
T  29050807 tagctcagttggtaggacaatgcattattatatgcaggggccggggtttgaactccggacaccccattta 29050876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 42455482 - 42455429
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||||||||||||||||||| ||  || |||||||||    
T  42455482 tagctcagttggtaggacaatgcattattatatgcaggggccggagttcgaacc 42455429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 7234947 - 7234907
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||||||||||||||||| || ||| ||||||||||||    
T  7234947 aggacaatgcattattatatgtagaggtcggggttcgaacc 7234907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 7645190 - 7645142
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttc 52  Q
    ||||| |||||  |||||||||||||||||||||||| |||||| ||||    
T  7645190 tagcttagttggtaggacaatgcattattatatgcagaggttggagttc 7645142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 19608620 - 19608672
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaac 56  Q
    |||||||||||  ||||  |||||||||||||||||| ||| |||||||||||    
T  19608620 tagctcagttgataggaatatgcattattatatgcaggggtcggggttcgaac 19608672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 23925553 - 23925601
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaa 55  Q
    ||||||||  |||||||||||||||||||||||| |||  |||||||||    
T  23925553 ctcagttgataggacaatgcattattatatgcaggggtctgggttcgaa 23925601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 24653168 - 24653200
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaa 55  Q
    |||||||||||||||||| ||||||||||||||    
T  24653168 atgcattattatatgcaggggttggggttcgaa 24653200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 29266075 - 29266155
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 84  Q
    ||||||| |||  |||||||||||||||||||||||| |||  | |||||||| ||  ||||| || ||||||| ||||||    
T  29266075 tagctcaattgataggacaatgcattattatatgcaggggtcagagttcgaacatcagacaccacacttatttactttata 29266155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 33729788 - 33729836
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaa 55  Q
    ||||||||  |||||||||||||||||||||||| ||  ||||||||||    
T  33729788 ctcagttggtaggacaatgcattattatatgcaggggccggggttcgaa 33729836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 9172456 - 9172397
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||||||  |||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  9172456 ctcagttggtaggacaatgcattattatatgcaggggtcggggttcgaacctcgaacacc 9172397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 53698068 - 53697974
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagc 98  Q
    |||||||||||| |||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||||  |||||  ||| ||||||||    
T  53698068 tagctcagttgttaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatttaccttataaggtgaattctagc 53697974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 20181218 - 20181298
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 84  Q
    |||||||||||  ||||||||||| ||||||||| || ||| |||||||||| |||  |||||||||||||| ||||||||    
T  20181218 tagctcagttggtaggacaatgcagtattatatgtaggggtaggggttcgaatctcagacacctcatttattaattttata 20181298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 32885695 - 32885766
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||||||||||||||||||||||| ||| || |||||||||||| ||||| || |||||    
T  32885695 tagctcagttggtaggacaatgcattattatatgcaggggtcggagttcgaacctcggacaccccacttatt 32885766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 98
Target Start/End: Complemental strand, 6637794 - 6637716
Alignment:
Q  20 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagc 98  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||| || ||||| || |||||  ||| ||||||||    
T  6637794 acaatacattattatatgcaggggttggggttcgaaccccgaacaccccacttattcatcttataaggtgaattctagc 6637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 51077875 - 51077945
Alignment:
Q  5 agctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||  |||||||||||||||||||||||| ||| || ||||||| |||||||||| || |||||    
T  51077875 agctcagttggtaggacaatgcattattatatgcaggggtcggagttcgaatctcgaacaccccacttatt 51077945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 27296827 - 27296900
Alignment:
Q  3 ttagctcagttgtgagga-caatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||  |||| ||||||||||||||||  || |||||||||||||||| |||||| ||||||||||    
T  27296827 ttagctcagttggcaggaacaatgcattattatatataggggttggggttcgaaccccgaacatctcatttatt 27296900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 36954158 - 36954215
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||| |||||||||||| || ||||| ||||||||    
T  36954158 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccatttatt 36954215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 33944448 - 33944356
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    ||||||||  |||| ||||||||||||||||||| ||  ||||||||||||||||| ||  || ||||| ||||||||  ||| |||||||||    
T  33944448 ctcagttggtaggataatgcattattatatgcaggggccggggttcgaacctcgaatactccacttattcattttataaggtgaattctagcc 33944356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 23661446 - 23661375
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  ||||||||||||| ||||||| || ||| |||||||||||| |||||||| || |||||    
T  23661446 tagctcagttgctaggacaatgcattgttatatgtaggggtaggggttcgaaccccgaacaccccacttatt 23661375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 34773767 - 34773676
Alignment:
Q  8 tcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||  |||||||||||||||||||||||| || || |||||||||| || ||||| || ||||| | ||||||  ||| |||||||||    
T  34773767 tcagttgataggacaatgcattattatatgcaggggctgaggttcgaaccccggacaccccacttattcactttataaggtgaattctagcc 34773676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 47018034 - 47017963
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  47018034 tagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 47017963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 5635196 - 5635258
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    |||||||||||  |||||||||||||||||||||||| ||| ||||||| |||| || |||||    
T  5635196 tagctcagttgctaggacaatgcattattatatgcaggggtcggggttcaaaccccggacacc 5635258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 8690234 - 8690292
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||||||||| ||| |||||||||||| || ||||| || |||||    
T  8690234 aggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttatt 8690292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 35333063 - 35333005
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||||||||||||  || ||||||||  |||||||| ||||||||    
T  35333063 aggacaatgcattattatatgcagtggccggagttcgaactccgaacaccccatttatt 35333005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 47416477 - 47416546
Alignment:
Q  6 gctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||  |||| |||| |||||||||||||| |||||||||||||| |||| ||||| || |||||    
T  47416477 gctcagttggtaggataatggattattatatgcaggggttggggttcgaatctcggacaccccacttatt 47416546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 48501732 - 48501675
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||| |||||||||||||| || |||||||||||| ||||||||| || |||||    
T  48501732 ggacaatgtattattatatgcaggggctggggttcgaacatcgaacaccccacttatt 48501675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 53815717 - 53815774
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| || ||||||||||||| || ||||| || |||||    
T  53815717 ggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttatt 53815774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 6053987 - 6054039
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaac 56  Q
    |||||||||||  |||||||||||||||||||||||| ||  |||||||||||    
T  6053987 tagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaac 6054039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 15507575 - 15507615
Alignment:
Q  26 cattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||||||||||||| |||||||||||||||| ||||||||    
T  15507575 cattattatatgcaggggttggggttcgaaccccgaacacc 15507615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 15640516 - 15640476
Alignment:
Q  19 gacaatgcattattatatgcagtggttggggttcgaacctc 59  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  15640516 gacaatgcattattatatgcagtgttcggggttcgaacctc 15640476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 42411528 - 42411464
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttatttta 82  Q
    ||||||||||| ||||||||||| ||| |||||||||||| || ||||| || ||||||| ||||    
T  42411528 ggacaatgcataattatatgcaggggtcggggttcgaaccccggacaccccacttatttacttta 42411464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 17859785 - 17859856
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  ||||||||||||||||||| | || ||  || ||||||||| ||||||||||| |||||    
T  17859785 tagctcagttggtaggacaatgcattattatacgtaggggccggagttcgaaccccgaacacctcacttatt 17859856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 22751016 - 22751087
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||   ||| |||||| ||||||||||||| ||| ||||||| |||| |||||||| ||||||||    
T  22751016 tagctcagttcgtaggtcaatgcgttattatatgcaggggtcggggttcaaaccccgaacaccccatttatt 22751087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 24234162 - 24234067
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||||||  ||| |||||||||||||||||||| ||  |||||| ||||| || ||||| || ||||| || |||||  ||| |||||||||    
T  24234162 tagctcagttggtaggtcaatgcattattatatgcaggggccggggtttgaaccccggacaccccacttattcatcttataaggtgaattctagcc 24234067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 26708625 - 26708575
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctca 69  Q
    ||||||||||||||||||||||| |||| |||||||||||||  ||||||||    
T  26708625 ggacaatgcattattatatgcaggggtt-gggttcgaacctcagacacctca 26708575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 40150496 - 40150551
Alignment:
Q  20 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||| ||| ||| |||||||||||| || |||||||| |||||    
T  40150496 acaatgcattattatatacaggggtcggggttcgaaccccggacacctcacttatt 40150551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 45350283 - 45350354
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||||| ||||||||||||||||| ||| || ||||||||| || ||||| || |||||    
T  45350283 tagctcagttggtaggacagtgcattattatatgcagaggtcggagttcgaaccccggacaccccacttatt 45350354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 45359762 - 45359833
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||||| ||||||||||||||||| ||| || ||||||||| || ||||| || |||||    
T  45359762 tagctcagttggtaggacagtgcattattatatgcagaggtcggagttcgaaccccggacaccccacttatt 45359833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 46735057 - 46734986
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||||| ||||||||||||||||| | | ||||||| ||||||| ||||| || |||||    
T  46735057 tagctcagttggtaggacactgcattattatatgcagggatcggggttcaaacctcggacaccccacttatt 46734986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 56546537 - 56546442
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    ||||||| |||  |||||||||||||||||||||||| ||  |||||||||||| |  ||||| || ||||| | |||| | |||| |||||||||    
T  56546537 tagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaaccacagacaccccacttattcactttaaaaagtgaattctagcc 56546442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 8241458 - 8241408
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||||| ||||  ||||||||||||||||||  |||||||||||||||    
T  8241458 ctcagttgtcaggaacatgcattattatatgcagacgttggggttcgaacc 8241408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 9084780 - 9084846
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 84  Q
    |||||||||||| |||||||||| ||| ||| ||||||||||| ||||| || ||||| || |||||    
T  9084780 ggacaatgcattgttatatgcaggggtcgggattcgaacctcggacaccccacttattcatcttata 9084846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 37032254 - 37032196
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||||||||| ||| ||| |||||||| || ||||| || |||||    
T  37032254 aggacaatgcattattatatgcaggggtcgggattcgaaccccggacaccccacttatt 37032196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 42425919 - 42425953
Alignment:
Q  29 tattatatgcagtggttggggttcgaacctcgaac 63  Q
    |||||||||||| ||||||||||||||||||||||    
T  42425919 tattatatgcagaggttggggttcgaacctcgaac 42425953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 43327400 - 43327318
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||| ||||||||||||||||||| || | ||||||||||| || ||||| || |||||||  ||||| |||| ||| |||||    
T  43327400 aggataatgcattattatatgcagggggttgggttcgaaccccgcacaccccacttatttaccttataaagtgaattttagcc 43327318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 56314781 - 56314839
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||||||||| |||  ||||||||||| || ||||| || |||||    
T  56314781 aggacaatgcattattatatgcaggggtcagggttcgaaccacggacaccacacttatt 56314839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 3544520 - 3544467
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||||||||||||||||||  ||  ||||||||||||    
T  3544520 tagctcagttggtaggacaatgcattattatatgcaaaggccggggttcgaacc 3544467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 9285747 - 9285694
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||| |||  |||||||||||||||||||||||| |  |||||||||||||    
T  9285747 tagctcaattggtaggacaatgcattattatatgcagggtctggggttcgaacc 9285694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 9924867 - 9924916
Alignment:
Q  8 tcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||  ||||||| |||||||||||||||| ||| ||||||||||||    
T  9924867 tcagttggtaggacaacgcattattatatgcaggggtcggggttcgaacc 9924916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 13211436 - 13211387
Alignment:
Q  8 tcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||  |||||||||||||||||||||||  ||| ||||||||||||    
T  13211436 tcagttggtaggacaatgcattattatatgcatgggtcggggttcgaacc 13211387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 14149814 - 14149871
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  14149814 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 14149871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 28520805 - 28520748
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  28520805 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 28520748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 35909247 - 35909198
Alignment:
Q  8 tcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||  |||||||| ||||||||||||||| ||| ||||||||||||    
T  35909247 tcagttggtaggacaatacattattatatgcagaggtcggggttcgaacc 35909198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 36008296 - 36008353
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||| |||||||||| ||  |||||||||||| |||||||| || |||||    
T  36008296 ggacaatgcattgttatatgcaggggccggggttcgaaccccgaacaccccacttatt 36008353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 43115273 - 43115346
Alignment:
Q  2 cttagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||| |||||||  ||||||||| |||||||||||||| ||| | | |||||||| || ||||| ||||||||    
T  43115273 cttagttcagttggtaggacaatgtattattatatgcaggggtcgagattcgaaccccggacaccccatttatt 43115346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 45141321 - 45141228
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctag 97  Q
    ||||| |||||| || | ||||||||||||||| ||  ||| |||||||||||| || |||||||| ||||| || |||||  ||| |||||||    
T  45141321 tagctgagttgttagtataatgcattattatatacaagggtcggggttcgaaccccggacacctcacttattcatgttataaggtgaattctag 45141228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 48968284 - 48968227
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  48968284 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 48968227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 52560771 - 52560824
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||| |||  |||||||||||||||||||||||| ||  ||||||||||||    
T  52560771 tagctcaattggtaggacaatgcattattatatgcaggggccggggttcgaacc 52560824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 3465593 - 3465661
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||  |||||||||||||||||||||||| ||  || ||||||||| || ||||| || |||||    
T  3465593 ctcagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttatt 3465661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 4722552 - 4722516
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcag 40  Q
    |||||||||||  ||||||||||||||||||||||||    
T  4722552 tagctcagttggtaggacaatgcattattatatgcag 4722516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 10098132 - 10098212
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 84  Q
    |||||||| ||  |||||||||||||||||||||||| ||  ||| |||||||| || ||||| || ||||| || |||||    
T  10098132 tagctcagctggtaggacaatgcattattatatgcaggggccgggattcgaaccccggacaccccacttattcatcttata 10098212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 16201303 - 16201355
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaac 56  Q
    |||||||||||  ||||||||||||||||| ||| || |||||||||| ||||    
T  16201303 tagctcagttggtaggacaatgcattattacatgtaggggttggggtttgaac 16201355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 29269402 - 29269323
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 84  Q
    ||||||||||| | |||||||||||||||||||| || || |||| |||||||| || ||||| || ||||| || |||||    
T  29269402 tagctcagttg-gtggacaatgcattattatatgtaggggctgggattcgaaccccggacaccccacttattcatcttata 29269323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 35031390 - 35031426
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcag 40  Q
    |||||||||||  ||||||||||||||||||||||||    
T  35031390 tagctcagttggtaggacaatgcattattatatgcag 35031426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 35451194 - 35451138
Alignment:
Q  19 gacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||||||| ||| || ||||||||  || |||||||| |||||    
T  35451194 gacaatgcattattatatgcaggggtcggagttcgaactacggacacctcacttatt 35451138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 43142523 - 43142563
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||| |||||||||||||| || ||||||||||||||||    
T  43142523 aggacagtgcattattatatgtaggggttggggttcgaacc 43142563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 43606188 - 43606152
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcag 40  Q
    |||||||||||  ||||||||||||||||||||||||    
T  43606188 tagctcagttgataggacaatgcattattatatgcag 43606152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 50657887 - 50657923
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcag 40  Q
    |||||||||||  ||||||||||||||||||||||||    
T  50657887 tagctcagttggtaggacaatgcattattatatgcag 50657923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 52031211 - 52031267
Alignment:
Q  2 cttagctcagttgtgagga-caatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||||  |||| |||||||||| ||||||||| ||| ||||||||||||    
T  52031211 cttagctcagttggcaggaacaatgcattagtatatgcaggggtcggggttcgaacc 52031267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 55266523 - 55266463
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaaca 64  Q
    |||||||||||  || ||||||||||||||||||||| ||| || ||||||| | ||||||    
T  55266523 tagctcagttggtagaacaatgcattattatatgcaggggtcggagttcgaatcccgaaca 55266463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 56555582 - 56555626
Alignment:
Q  31 ttatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||| ||| ||||||||||||||||||||| || |||||    
T  56555582 ttatatgcaggggtcggggttcgaacctcgaacaccccacttatt 56555626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 13540052 - 13539957
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||||||  ||||||||||||||||||||| || |||||||||||||||| || ||||| || |||||||  |||||  ||| |||||||||    
T  13540052 tagctcagttggtaggacaatgcattattatatgtaggggttggggttcgaaccccggacaccccacttatttaccttataaggtgaattctagcc 13539957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 50724375 - 50724445
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||    
T  50724375 tagctcagttg-gtggacaatgcattattatatgcaggggttggggttcgaacctcggacaccccacttatt 50724445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 50788473 - 50788403
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||    
T  50788473 tagctcagttg-gtggacaatgcattattatatgcaggggttggggttcgaacctcggacaccccacttatt 50788403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 49146089 - 49146186
Alignment:
Q  2 cttagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||| ||||||||  |||||||||||||||||||||||| ||| |||||||||||| || ||||| || ||||| | ||||||  ||| |||||||||    
T  49146089 cttaactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttataaggtgaattctagcc 49146186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 33206764 - 33206835
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||||||||||||||||||||||| || ||||||||||||| || ||||| || |||||    
T  33206764 tagctcagttggtaggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttatt 33206835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 99
Target Start/End: Complemental strand, 36727550 - 36727456
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||||||  |||||||||||||||||||||||  ||| ||||||||||||||| ||||| || ||||| || |||||  ||| |||||||||    
T  36727550 tagctcagttggtaggacaatgcattattatatgca-aggtcggggttcgaacctcggacaccccacttattcatcttataaggtgaattctagcc 36727456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 43566884 - 43566829
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctc 59  Q
    |||||||||||  |||||||||||||||||||||||| ||| ||||||||||||||    
T  43566884 tagctcagttggtaggacaatgcattattatatgcaggggtcggggttcgaacctc 43566829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 19540348 - 19540413
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctca 69  Q
    |||||||||||  |||||||| |||||||||||||||  | ||||||||||||| |||||||||||    
T  19540348 tagctcagttggtaggacaatacattattatatgcaggagctggggttcgaaccccgaacacctca 19540413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 36331800 - 36331719
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    ||||||||||||||||||||||| ||| |||||||||||| || ||||| || ||||| | |||| | |||| |||||||||    
T  36331800 ggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattcactttaaaaagtgaattctagcc 36331719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 55195946 - 55195869
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 84  Q
    ||||||||  ||||||||||||||| ||||| || |||||| ||||||||  ||||||||||||||||| || |||||    
T  55195946 ctcagttgataggacaatgcattatcatatgtaggggttggagttcgaactccgaacacctcatttattcatcttata 55195869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 32508879 - 32508811
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||  |||| ||||||||||||||||||| ||| |||||||||||| |||||||| || |||||    
T  32508879 ctcagttgataggataatgcattattatatgcaggggtcggggttcgaaccccgaacaccccacttatt 32508811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 28226259 - 28226204
Alignment:
Q  20 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||| |||||||||||||| | |||||||| || |||||    
T  28226259 acaatgcattattatatgcaggggttggggttcgaatcccgaacaccccacttatt 28226204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 40786287 - 40786342
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctc 59  Q
    |||||||||||  |||||||||||||||||||||||  ||| ||||||||||||||    
T  40786287 tagctcagttggtaggacaatgcattattatatgcatgggtcggggttcgaacctc 40786342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 49639035 - 49639106
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  ||||||||||||||||||||| || ||  |||||||||||| |||||||| || |||||    
T  49639035 tagctcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccgaacaccccacttatt 49639106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 13616149 - 13616067
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    ||||||||||||||||||||| || ||| || |||||||||||| ||||| || ||||| || |||||  ||| |||||||||    
T  13616149 aggacaatgcattattatatgtaggggtcggagttcgaacctcggacaccccacttattcatcttataaggtgaattctagcc 13616067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 31698553 - 31698635
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||| |||||||||||||||||||  |  ||||||||||||||||||||| || ||||| || |||||  ||| |||||||||    
T  31698553 aggataatgcattattatatgcaggagccggggttcgaacctcgaacaccccacttattcatcttataaggtgaattctagcc 31698635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 14868706 - 14868763
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||  |||||||||||| |||||||| || |||||    
T  14868706 ggacaatgcattattatatgcaggggccggggttcgaaccccgaacaccccacttatt 14868763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 20244141 - 20244194
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||||||||||||||||||| ||  ||||||||||||    
T  20244141 tagctcagttggtaggacaatgcattattatatgcaggggccggggttcgaacc 20244194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 47191394 - 47191451
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| || ||| ||||||||| |||||||| || |||||    
T  47191394 ggacaatgcattattatatgcaggggctggagttcgaaccccgaacaccccacttatt 47191451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 21420278 - 21420226
Alignment:
Q  3 ttagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaa 55  Q
    ||||||||||||  |||||||||||||||||||||||| ||| | ||||||||    
T  21420278 ttagctcagttggtaggacaatgcattattatatgcagcggtcgaggttcgaa 21420226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 34136770 - 34136822
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaac 56  Q
    |||||||||||  || |||||||||||||||||| || |||||||||||||||    
T  34136770 tagctcagttggtagaacaatgcattattatatgtaggggttggggttcgaac 34136822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 38555100 - 38555045
Alignment:
Q  19 gacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||||||| || | ||||||||||||| ||||||||| |||||    
T  38555100 gacaatgcattattatatgcag-gggtcgggttcgaacctcaaacacctcacttatt 38555045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 39492833 - 39492881
Alignment:
Q  9 cagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||| |||||||||||||||||||||||  || |||||||||||||    
T  39492833 cagttgttaggacaatgcattattatatgcatgggctggggttcgaacc 39492881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 43598821 - 43598876
Alignment:
Q  19 gacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||||| || |||||    
T  43598821 gacaatgcattattatatgcagaggtcggggttcgaa-ctcgaacaccccacttatt 43598876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 14417875 - 14417946
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||| |||  |||||||||||||||||||||||| || ||| ||||||||| || ||||| || |||||    
T  14417875 tagctcaattggtaggacaatgcattattatatgcaggggctggagttcgaaccccggacaccccacttatt 14417946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 35483276 - 35483327
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaa 55  Q
    ||||||||||   |||||||||||||||||||||||| ||| ||||||||||    
T  35483276 tagctcagttagtaggacaatgcattattatatgcaggggtcggggttcgaa 35483327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 35849367 - 35849312
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctc 59  Q
    |||||||||||  |||||||||||||||||||||||| |  || ||||||||||||    
T  35849367 tagctcagttggtaggacaatgcattattatatgcagggactgtggttcgaacctc 35849312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 84
Target Start/End: Original strand, 37059467 - 37059534
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttata 84  Q
    |||| ||||||||||||||||||| || ||| ||||||| | ||||||||||| ||||| || |||||    
T  37059467 aggataatgcattattatatgcaggggctggagttcgaatcccgaacacctcacttattcatcttata 37059534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 41121881 - 41121940
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||||||  |||||||||||||||||||||||| ||| ||||||| |||| || |||||    
T  41121881 ctcagttggtaggacaatgcattattatatgcagaggtcggggttcaaaccccggacacc 41121940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 44953230 - 44953139
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgataggttatctgac 114  Q
    |||||||||||||||||| |||||  ||||||||| |  |||||||||||||| |  |||||  ||| |||||||||  ||| |||||||||    
T  44953230 atgcattattatatgcaggggttgatgttcgaaccccagacacctcatttattcaccttataatgtgaattctagccactagattatctgac 44953139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 48173293 - 48173364
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  | ||||||||||||||||||| |  |||||| ||||||||| || |||||||| |||||    
T  48173293 tagctcagttggtaagacaatgcattattatatgtatgggttggagttcgaaccccggacacctcacttatt 48173364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 53467960 - 53468026
Alignment:
Q  8 tcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||  |||||||||||||||||||||||| ||  ||||||||||||||| ||||| || |||||    
T  53467960 tcagttggtaggacaatgcattattatatgcag-gggcggggttcgaacctcggacaccccacttatt 53468026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 24751348 - 24751286
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||||||||   |||||||||||||||||||||||| ||  |||||||||||| || |||||    
T  24751348 tagctcagttagtaggacaatgcattattatatgcaggggccggggttcgaaccccggacacc 24751286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 29507222 - 29507276
Alignment:
Q  2 cttagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaac 56  Q
    |||| ||||||||  ||||||||||||||||||||||||  |||| |||||||||    
T  29507222 cttaactcagttggtaggacaatgcattattatatgcaggagttgtggttcgaac 29507276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 34407159 - 34407125
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||||||||| ||||||||||||||||    
T  34407159 atgcattattatatgcaggggttggggttcgaacc 34407125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 9625004 - 9625061
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  9625004 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 9625061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 27183755 - 27183698
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||  |||||||||||| || ||||| || |||||    
T  27183755 ggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttatt 27183698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 36476380 - 36476437
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| ||  || ||||||||| |||||||| || |||||    
T  36476380 ggacaatgcattattatatgcaggggccggagttcgaaccccgaacaccccacttatt 36476437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 3784091 - 3784139
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||||||||||||||||| ||| ||| |||||||||||| || |||||    
T  3784091 ggacaatgcattattatatacaggggtcggggttcgaaccccggacacc 3784139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 13874921 - 13874874
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttc 52  Q
    ||||||||||| | ||||||||||||||||||||||| ||| |||||||    
T  13874921 tagctcagttg-gtggacaatgcattattatatgcaggggtcggggttc 13874874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 16278039 - 16277987
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaac 56  Q
    |||||||||||  ||||| |||||||||||||||||| ||| ||| |||||||    
T  16278039 tagctcagttggtaggaccatgcattattatatgcaggggtcgggattcgaac 16277987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 23820639 - 23820731
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    ||||||||  |||||||||||||||||||||||| ||  || ||||||||| |  ||||| || ||||| || |||||  ||| |||||||||    
T  23820639 ctcagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccagacaccccacttattcatcttataaggtgaattctagcc 23820731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 26583127 - 26583179
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||| ||| |||||||||||  || |||||||| |||||    
T  26583127 atgcattattatatgcaggggtcggggttcgaactacggacacctcaattatt 26583179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 28951892 - 28951944
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||||||||| |||  ||||||||||| |||||||| || |||||    
T  28951892 atgcattattatatgcaggggtcagggttcgaaccccgaacaccccacttatt 28951944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 34344865 - 34344829
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcag 40  Q
    |||||||||||  ||||||||||||||||||||||||    
T  34344865 tagctcagttgataggacaatgcattattatatgcag 34344829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 34503222 - 34503258
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcag 40  Q
    |||||||||||  ||||||||||||||||||||||||    
T  34503222 tagctcagttggtaggacaatgcattattatatgcag 34503258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 37279650 - 37279686
Alignment:
Q  20 acaatgcattattatatgcagtggttggggttcgaac 56  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  37279650 acaatacattattatatgcagaggttggggttcgaac 37279686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 42271101 - 42271049
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaac 56  Q
    |||||||||||  ||||||||||||| |||||||||| ||  |||||||||||    
T  42271101 tagctcagttggtaggacaatgcattgttatatgcaggggccggggttcgaac 42271049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 43774206 - 43774302
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgataggttatctgac 114  Q
    |||||||||||| |||||||||| ||| |||||||||||| |  ||||| || ||||| |  |||||  ||| |||||||||  ||||||| |||||    
T  43774206 ggacaatgcattgttatatgcaggggtcggggttcgaaccccagacaccccacttattcaccttataaggtgaattctagccactaggttacctgac 43774302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 47062153 - 47062054
Alignment:
Q  5 agctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgatag 104  Q
    ||||||||||  ||||||||||||||||||||| |  ||| || ||||||||| || ||||| |||||||| | ||||||  |||  |||||||| ||||    
T  47062153 agctcagttggtaggacaatgcattattatatg-atgggtcggagttcgaaccccggacaccccatttattaactttataaggtgagttctagccaatag 47062055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 19165358 - 19165411
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||||||||    
T  19165358 tagctcagttggtaggacaatgcattattatatgcagaggttggggttcgaacc 19165411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 9438312 - 9438371
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||| || |||||    
T  9438312 ctcagttggtaggacaatgcattattatatgcaggggttggggttcgaaccccggacacc 9438371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 10377212 - 10377141
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||||||||||||||||||||||| ||  |||||||||||| |||||||| || |||||    
T  10377212 tagctcagttggtaggacaatgcattattatatgcagaggccggggttcgaaccccgaacaccccacttatt 10377141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 34365746 - 34365837
Alignment:
Q  8 tcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagcc 99  Q
    |||||||  |||||||||||||||||| ||||| ||  ||||||||||||||||||||  || ||||| || ||||| |||| |||||||||    
T  34365746 tcagttggtaggacaatgcattattatgtgcaggggccggggttcgaacctcgaacactccacttattcatcttataaagtgaattctagcc 34365837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 18244100 - 18244047
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||||||||||||||||||| ||| ||||||||||||    
T  18244100 tagctcagttggtaggacaatgcattattatatgcagaggtcggggttcgaacc 18244047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 32057041 - 32057094
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||||||||||||||||||||||| | ||||||||||    
T  32057041 tagctcagttgataggacaatgcattattatatgcagtggtcgaggttcgaacc 32057094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 35190770 - 35190841
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  || ||||||||||||||||||||| ||| || ||||||||| |||||||| || |||||    
T  35190770 tagctcagttggtagaacaatgcattattatatgcaggggtcggagttcgaaccccgaacaccccacttatt 35190841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 22850818 - 22850888
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttat 74  Q
    ||||||||||   |||| ||| ||||||||||||||| |||||||||||||| | |||||||| |||||||    
T  22850818 tagctcagttagtaggaaaatacattattatatgcaggggttggggttcgaagcccgaacaccccatttat 22850888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 19642635 - 19642582
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||||||||||||||||||  ||| ||||||||||||    
T  19642635 tagctcagttggtaggacaatgcattattatatgcatcggtcggggttcgaacc 19642582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 5288430 - 5288362
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||  |||||||||||||||||||||||| ||| ||||| |||||  || |||||||| |||||    
T  5288430 ctcagttggtaggacaatgcattattatatgcaggggtcggggtccgaactccggacacctcaattatt 5288362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 22389838 - 22389742
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccg 100  Q
    |||||||||||  |||||||||||||||||||||||| |||  ||||||||| | || ||||| || ||||| |  |||||  ||| ||||||||||    
T  22389838 tagctcagttggtaggacaatgcattattatatgcaggggtcagggttcgaatcccggacaccccacttattcaccttataaggtgaattctagccg 22389742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 12089104 - 12089175
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||||||||||||||||||||||| ||  || ||||||||| || ||||| || |||||    
T  12089104 tagctcagttggtaggacaatgcattattatatgcaggggccggagttcgaaccccggacaccccacttatt 12089175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 23771040 - 23771111
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||| |||  |||||||||||||||||||||||| ||  |||||||||||  || ||||| ||||||||    
T  23771040 tagctcaattggtaggacaatgcattattatatgcaggggaaggggttcgaactccggacaccccatttatt 23771111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 26528590 - 26528645
Alignment:
Q  20 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||| ||| ||||||| ||||||| ||||| || |||||    
T  26528590 acaatgcattattatatgcaggggtcggggttcaaacctcggacaccccacttatt 26528645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 31949899 - 31949860
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||||||||||||||||||| ||| ||||||||||||    
T  31949899 ggacaatgcattattatatgcaggggtcggggttcgaacc 31949860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 7392545 - 7392607
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||||||||   |||| ||||||||||||||||||  ||||||| |||||||||| ||||||    
T  7392545 tagctcagttagtaggataatgcattattatatgcaaaggttgggattcgaacctcaaacacc 7392607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 10373618 - 10373664
Alignment:
Q  20 acaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||||||||||||||||||| ||| |||||||||||| || |||||    
T  10373618 acaatgcattattatatgcaggggtcggggttcgaaccccggacacc 10373664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 24623529 - 24623579
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcga 54  Q
    |||||||||||  |||||||||||||||||||||||  ||| |||||||||    
T  24623529 tagctcagttggtaggacaatgcattattatatgcaagggtcggggttcga 24623579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 25064738 - 25064704
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||||||||| ||||||||||||||||    
T  25064738 atgcattattatatgcaggggttggggttcgaacc 25064704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 2945617 - 2945674
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||| |||||||||| ||| ||||||| ||||||| ||||| || |||||    
T  2945617 ggacaatgcattgttatatgcaggggtcggggttcaaacctcggacaccccacttatt 2945674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 12127997 - 12127944
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||||||||||||||||||| ||| ||  ||||||||    
T  12127997 tagctcagttggtaggacaatgcattattatatgcaggggtcggaattcgaacc 12127944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 26878822 - 26878867
Alignment:
Q  19 gacaatgcattattatatgcagtggttggggttcgaacctcgaaca 64  Q
    |||||||||||||||||||||| ||||| |||||||| | ||||||    
T  26878822 gacaatgcattattatatgcaggggttgtggttcgaatcccgaaca 26878867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 34792931 - 34792879
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    ||||||||||| | ||||||||||||||||||||||| |||  |||||||||||    
T  34792931 tagctcagttg-gtggacaatgcattattatatgcaggggtctgggttcgaacc 34792879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 1488114 - 1488166
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||| |||||||||| ||| |||||||||||| | |||||| ||||||||    
T  1488114 atgcattgttatatgcagaggtcggggttcgaaccccaaacaccccatttatt 1488166  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 3448373 - 3448469
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgataggttatctgac 114  Q
    |||||||||||| ||||| |||| ||  |||||||||||| || ||||| || ||||| || |||||  ||| ||||||||| ||||| || |||||    
T  3448373 ggacaatgcattgttatacgcaggggccggggttcgaaccccggacaccccacttattcatcttataaggtgaattctagccaataggctacctgac 3448469  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 6296996 - 6296940
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcg 60  Q
    |||||| ||||  ||||||||||||||||||||||| |||| ||  |||||||||||    
T  6296996 tagctcggttgataggacaatgcattattatatgcaatggtcggaattcgaacctcg 6296940  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 6303806 - 6303750
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcg 60  Q
    |||||| ||||  ||||||||||||||||||||||| |||| ||  |||||||||||    
T  6303806 tagctcggttgataggacaatgcattattatatgcaatggtcggaattcgaacctcg 6303750  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 8233093 - 8233193
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttattttatacagtgtattctagccgata 103  Q
    |||||||||||  |||||||| ||||||||||| ||| |||  ||||||||||  ||||||||| | ||||| |  |||||  ||| ||||||||| |||    
T  8233093 tagctcagttggtaggacaatacattattatatacagaggtcagggttcgaactccgaacaccttacttattcaccttataatgtgaattctagccaata 8233192  T
Q  104 g 104  Q
    |    
T  8233193 g 8233193  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 9064887 - 9064951
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatttatttta 82  Q
    ||||||||||||||||||||||| ||  |||||||||||| |  ||||| || ||||||| ||||    
T  9064887 ggacaatgcattattatatgcaggggccggggttcgaaccccagacaccccacttatttacttta 9064951  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 9491820 - 9491752
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||  ||||||||||||||||||||| || ||  |||||||||||| || ||||| || |||||    
T  9491820 ctcagttggtaggacaatgcattattatatgtaggggccggggttcgaaccccggacaccccacttatt 9491752  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Original strand, 11520743 - 11520795
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||| |||||||||||||  |||||||||||  ||||||| |||||||||    
T  11520743 atgcattcttatatgcagtggccggggttcgaactccgaacacatcatttatt 11520795  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 12525037 - 12524986
Alignment:
Q  12 ttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaaca 64  Q
    |||| |||||| ||||||||| ||||||||| |||||||||||||| ||||||    
T  12525037 ttgtaaggacattgcattatt-tatgcagtgtttggggttcgaaccccgaaca 12524986  T

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Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 19374875 - 19374839
Alignment:
Q  29 tattatatgcagtggttggggttcgaacctcgaacac 65  Q
    |||||||||||| |||||||||||||||| |||||||    
T  19374875 tattatatgcaggggttggggttcgaaccccgaacac 19374839  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 20716480 - 20716428
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaac 56  Q
    |||||||||||  ||||||||||||||||||||| || ||| ||| |||||||    
T  20716480 tagctcagttggtaggacaatgcattattatatgtaggggtcgggattcgaac 20716428  T

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Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 22501025 - 22501061
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcag 40  Q
    |||||||||||  ||||||||||||||||||||||||    
T  22501025 tagctcagttggtaggacaatgcattattatatgcag 22501061  T

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Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 30566068 - 30566136
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||  |||||||||||||||||||||||| |||||  ||| ||||| || ||||| || |||||    
T  30566068 ctcagttggtaggacaatgcattattatatgcagaggttgaagtttgaaccccggacaccccacttatt 30566136  T

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Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 34522013 - 34522065
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctca 69  Q
    ||||||||| |||||||||| ||| ||  || |||||||||||||||||||||    
T  34522013 aggacaatgaattattatatccaggggacggagttcgaacctcgaacacctca 34522065  T

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Target: scaffold0008 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 43784 - 43714
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||  |||||||||||||||||||||||| |  |||||||||||||||||||||| || |||||    
T  43784 tagctcagttggtaggacaatgcattattatatgcag-gactggggttcgaacctcgaacaccccacttatt 43714  T

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Target: scaffold0343 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 8580 - 8629
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||||||    
T  8580 aggacaatgcattattatatgtaggggttggggttcgaaccccgaacacc 8629  T

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Target: scaffold0308 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 7082 - 7154
Alignment:
Q  4 tagctcagttgtgagg-acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||||||||| ||| ||||||||||||||||||||| ||  |||||||||||| || ||||| ||||||||    
T  7082 tagctcagttgttagggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccatttatt 7154  T

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Target: scaffold0191 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 16854 - 16915
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacc 66  Q
    |||||||||||  |||||||||||||||||||||||| || | ||||||||||| ||||||||    
T  16854 tagctcagttggtaggacaatgcattattatatgcag-gggtcgggttcgaaccccgaacacc 16915  T

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Target: scaffold0178 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 4330 - 4383
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||||||  |||||||| ||||||||||||||| ||| ||||||||||||    
T  4330 tagctcagttgataggacaatacattattatatgcaggggtcggggttcgaacc 4383  T

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Target: scaffold0070 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 12586 - 12643
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| |||  |||||||||||||| | ||| ||||||||    
T  12586 ggacaatgcattattatatgcaggggtcagggttcgaacctcggataccccatttatt 12643  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 25047 - 25104
Alignment:
Q  18 ggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||||||||||||||||| || ||||||||||||| || ||||| || |||||    
T  25047 ggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttatt 25104  T

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Target: scaffold0227 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 21873 - 21927
Alignment:
Q  20 acaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    |||||| |||||||||||||| |||||||||||||||| |||||||| || |||||    
T  21873 acaatgtattattatatgcaggggttggggttcgaacc-cgaacaccccacttatt 21927  T

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Target: scaffold1990 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1990
Description:

Target: scaffold1990; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 914 - 952
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaa 55  Q
    |||||||||||||||||||||||| || |||||||||||    
T  914 aggacaatgcattattatatgcaggggctggggttcgaa 952  T

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Target: scaffold0092 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 47392 - 47354
Alignment:
Q  17 aggacaatgcattattatatgcagtggttggggttcgaa 55  Q
    |||||||||||||||||||||||| || |||||||||||    
T  47392 aggacaatgcattattatatgcaggggctggggttcgaa 47354  T

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Target: scaffold0062 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 7106 - 7053
Alignment:
Q  4 tagctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacc 57  Q
    |||||||| ||  |||||||||||||||||||||||| ||  ||||||||||||    
T  7106 tagctcagctggtaggacaatgcattattatatgcaggggcgggggttcgaacc 7053  T

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Target: scaffold1086 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 2498 - 2566
Alignment:
Q  7 ctcagttgtgaggacaatgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||||  |||||||||||||||||||||||| |||||  ||| ||||| || ||||| || |||||    
T  2498 ctcagttggtaggacaatgcattattatatgcagaggttgaagtttgaaccccggacaccccacttatt 2566  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 19464 - 19412
Alignment:
Q  23 atgcattattatatgcagtggttggggttcgaacctcgaacacctcatttatt 75  Q
    ||||||| ||||||| || |||||||| | |||||||| ||||||||||||||    
T  19464 atgcattgttatatgtaggggttggggattgaacctcggacacctcatttatt 19412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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