View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17944_high_1 (Length: 322)

Name: NF17944_high_1
Description: NF17944
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17944_high_1
NF17944_high_1
[»] chr3 (47 HSPs)
chr3 (16-250)||(45559941-45560175)
chr3 (246-321)||(9484593-9484668)
chr3 (246-321)||(29793365-29793440)
chr3 (248-321)||(901075-901148)
chr3 (248-321)||(42098614-42098687)
chr3 (249-321)||(48927789-48927861)
chr3 (249-321)||(49076413-49076485)
chr3 (249-314)||(29720395-29720460)
chr3 (249-321)||(12948040-12948112)
chr3 (249-321)||(16434844-16434916)
chr3 (249-321)||(34263691-34263763)
chr3 (247-321)||(34555149-34555223)
chr3 (249-321)||(29455695-29455767)
chr3 (249-321)||(50673677-50673749)
chr3 (246-321)||(2643256-2643331)
chr3 (249-321)||(28958986-28959058)
chr3 (246-321)||(1778358-1778433)
chr3 (251-310)||(14751040-14751099)
chr3 (246-321)||(29809342-29809417)
chr3 (254-321)||(34669613-34669680)
chr3 (248-321)||(53274982-53275055)
chr3 (249-321)||(38833952-38834024)
chr3 (248-312)||(44781979-44782043)
chr3 (249-313)||(46866343-46866407)
chr3 (252-321)||(49818760-49818829)
chr3 (249-321)||(4464881-4464953)
chr3 (249-321)||(4945838-4945910)
chr3 (249-321)||(18013457-18013529)
chr3 (254-321)||(38878465-38878532)
chr3 (249-321)||(32961246-32961318)
chr3 (249-321)||(36179123-36179195)
chr3 (249-319)||(43169994-43170064)
chr3 (247-321)||(52094081-52094155)
chr3 (252-321)||(1334282-1334351)
chr3 (249-321)||(36364750-36364820)
chr3 (260-321)||(36594406-36594467)
chr3 (249-321)||(4229175-4229247)
chr3 (266-321)||(26759496-26759551)
chr3 (250-321)||(53055612-53055683)
chr3 (268-314)||(43370310-43370356)
chr3 (249-315)||(47069406-47069472)
chr3 (256-318)||(50035077-50035139)
chr3 (278-321)||(43394545-43394588)
chr3 (249-315)||(28229038-28229104)
chr3 (291-321)||(29588415-29588445)
chr3 (249-315)||(46818382-46818450)
chr3 (249-321)||(3547420-3547492)
[»] chr6 (28 HSPs)
chr6 (249-321)||(17496314-17496386)
chr6 (246-321)||(24798542-24798617)
chr6 (249-321)||(2667321-2667393)
chr6 (249-321)||(2397770-2397842)
chr6 (249-321)||(29795451-29795523)
chr6 (249-321)||(2656666-2656738)
chr6 (249-321)||(30699261-30699333)
chr6 (249-321)||(32541473-32541545)
chr6 (247-321)||(9022838-9022912)
chr6 (244-321)||(16661598-16661675)
chr6 (249-321)||(28483037-28483110)
chr6 (246-314)||(24949532-24949600)
chr6 (247-321)||(4890122-4890196)
chr6 (249-321)||(31708893-31708965)
chr6 (249-321)||(6142503-6142575)
chr6 (277-321)||(24825193-24825237)
chr6 (249-321)||(31948637-31948709)
chr6 (246-321)||(995560-995635)
chr6 (254-321)||(13358514-13358581)
chr6 (249-315)||(10109413-10109478)
chr6 (251-321)||(29515022-29515092)
chr6 (256-321)||(32673755-32673820)
chr6 (249-321)||(2141568-2141640)
chr6 (277-321)||(6188652-6188696)
chr6 (279-321)||(16969408-16969450)
chr6 (279-321)||(35117310-35117352)
chr6 (256-321)||(10105818-10105883)
chr6 (248-321)||(16434542-16434615)
[»] chr1 (42 HSPs)
chr1 (247-321)||(45299316-45299390)
chr1 (245-321)||(1821624-1821700)
chr1 (249-321)||(6017445-6017517)
chr1 (249-321)||(8251145-8251217)
chr1 (249-321)||(10100509-10100581)
chr1 (255-321)||(26543874-26543940)
chr1 (248-321)||(10124108-10124181)
chr1 (249-321)||(29253479-29253551)
chr1 (249-321)||(31932174-31932246)
chr1 (249-321)||(52749281-52749353)
chr1 (246-321)||(8048744-8048819)
chr1 (249-321)||(5606387-5606459)
chr1 (249-321)||(7075326-7075398)
chr1 (249-321)||(28490160-28490232)
chr1 (249-321)||(41414203-41414275)
chr1 (249-321)||(41855717-41855789)
chr1 (249-321)||(44240519-44240591)
chr1 (251-321)||(44452197-44452267)
chr1 (266-321)||(10648197-10648252)
chr1 (255-321)||(40883417-40883483)
chr1 (249-321)||(2126652-2126724)
chr1 (249-321)||(5945765-5945837)
chr1 (249-321)||(12685894-12685966)
chr1 (249-321)||(50014557-50014629)
chr1 (259-315)||(52688540-52688595)
chr1 (255-321)||(4489067-4489133)
chr1 (264-321)||(48389081-48389138)
chr1 (249-321)||(43453161-43453233)
chr1 (249-321)||(9334377-9334453)
chr1 (249-321)||(9358150-9358226)
chr1 (258-321)||(31651897-31651960)
chr1 (262-321)||(49903681-49903740)
chr1 (249-314)||(48312029-48312093)
chr1 (249-321)||(33526158-33526230)
chr1 (266-321)||(38786942-38786997)
chr1 (262-321)||(44741356-44741415)
chr1 (279-321)||(33730190-33730232)
chr1 (248-314)||(38737377-38737443)
chr1 (247-321)||(47912279-47912353)
chr1 (248-321)||(22328150-22328223)
chr1 (249-321)||(3138605-3138676)
chr1 (249-321)||(41855797-41855869)
[»] scaffold0221 (1 HSPs)
scaffold0221 (249-321)||(5376-5448)
[»] chr7 (32 HSPs)
chr7 (249-321)||(30462213-30462285)
chr7 (247-321)||(38069049-38069123)
chr7 (249-321)||(16807138-16807210)
chr7 (249-321)||(37101018-37101090)
chr7 (246-321)||(36819613-36819688)
chr7 (249-319)||(25274011-25274081)
chr7 (249-321)||(35693822-35693894)
chr7 (247-321)||(32972319-32972393)
chr7 (256-321)||(40818689-40818754)
chr7 (249-321)||(40231928-40232000)
chr7 (246-321)||(9136654-9136729)
chr7 (246-321)||(40665760-40665835)
chr7 (248-321)||(4620065-4620139)
chr7 (255-321)||(38850708-38850774)
chr7 (279-321)||(46242472-46242514)
chr7 (248-321)||(28016115-28016187)
chr7 (252-321)||(47713424-47713493)
chr7 (249-321)||(7314337-7314409)
chr7 (249-321)||(9173328-9173400)
chr7 (249-321)||(31496637-31496709)
chr7 (249-321)||(33376775-33376847)
chr7 (249-321)||(18756599-18756671)
chr7 (249-321)||(38259484-38259556)
chr7 (249-321)||(42493517-42493589)
chr7 (266-321)||(19817322-19817377)
chr7 (249-307)||(35265823-35265881)
chr7 (279-321)||(38441843-38441885)
chr7 (249-321)||(41007948-41008020)
chr7 (247-312)||(32222548-32222613)
chr7 (249-314)||(36404925-36404990)
chr7 (247-315)||(3124144-3124212)
chr7 (247-299)||(19327328-19327380)
[»] chr5 (37 HSPs)
chr5 (249-321)||(1098175-1098247)
chr5 (249-321)||(14633007-14633079)
chr5 (248-321)||(20040407-20040480)
chr5 (249-321)||(1781137-1781209)
chr5 (252-321)||(14057711-14057780)
chr5 (249-321)||(19344691-19344763)
chr5 (249-321)||(31191169-31191241)
chr5 (249-321)||(33402583-33402655)
chr5 (249-321)||(40316818-40316890)
chr5 (249-321)||(41263121-41263193)
chr5 (249-321)||(41410651-41410723)
chr5 (256-321)||(8627142-8627207)
chr5 (248-321)||(13548212-13548285)
chr5 (249-321)||(1831351-1831423)
chr5 (249-321)||(20022860-20022932)
chr5 (255-321)||(30211733-30211799)
chr5 (252-321)||(14607549-14607618)
chr5 (248-321)||(30721677-30721750)
chr5 (249-321)||(39925203-39925275)
chr5 (246-321)||(9936880-9936955)
chr5 (247-321)||(40079979-40080053)
chr5 (248-321)||(10465287-10465360)
chr5 (252-321)||(34169832-34169901)
chr5 (256-321)||(34347474-34347539)
chr5 (249-321)||(27675540-27675612)
chr5 (249-321)||(30788205-30788277)
chr5 (249-321)||(32110664-32110736)
chr5 (249-321)||(14139935-14140007)
chr5 (249-321)||(20503040-20503112)
chr5 (256-315)||(2799638-2799697)
chr5 (247-321)||(2551619-2551693)
chr5 (266-315)||(2805814-2805863)
chr5 (264-321)||(28142943-28143000)
chr5 (260-321)||(41042829-41042890)
chr5 (279-321)||(967222-967264)
chr5 (268-321)||(35641788-35641841)
chr5 (249-321)||(32474014-32474086)
[»] chr4 (36 HSPs)
chr4 (249-321)||(43447165-43447237)
chr4 (247-321)||(31152659-31152733)
chr4 (249-321)||(3708253-3708325)
chr4 (249-321)||(10384848-10384920)
chr4 (249-321)||(37667765-37667837)
chr4 (249-321)||(39332821-39332893)
chr4 (249-321)||(40411600-40411672)
chr4 (249-321)||(55631866-55631938)
chr4 (246-321)||(46608210-46608285)
chr4 (248-321)||(48380472-48380545)
chr4 (254-321)||(39170963-39171030)
chr4 (247-321)||(42185272-42185346)
chr4 (246-321)||(31657347-31657422)
chr4 (248-321)||(8525407-8525480)
chr4 (249-321)||(29821050-29821122)
chr4 (249-321)||(43047387-43047459)
chr4 (249-320)||(28899063-28899134)
chr4 (246-321)||(33394074-33394149)
chr4 (251-314)||(48336426-48336489)
chr4 (255-321)||(1613209-1613275)
chr4 (247-321)||(6520433-6520507)
chr4 (249-321)||(28914368-28914440)
chr4 (245-321)||(39376863-39376939)
chr4 (249-320)||(24334373-24334444)
chr4 (249-321)||(1377503-1377575)
chr4 (249-321)||(23605893-23605965)
chr4 (249-321)||(28988385-28988457)
chr4 (246-321)||(53987771-53987846)
chr4 (254-321)||(47834135-47834202)
chr4 (265-321)||(1981373-1981429)
chr4 (265-321)||(50684936-50684992)
chr4 (266-321)||(37164033-37164088)
chr4 (255-317)||(52818680-52818742)
chr4 (247-312)||(4860078-4860142)
chr4 (249-321)||(18881348-18881420)
chr4 (249-321)||(44210149-44210221)
[»] chr2 (31 HSPs)
chr2 (249-321)||(8373434-8373506)
chr2 (251-321)||(7724602-7724672)
chr2 (248-321)||(12208988-12209061)
chr2 (247-321)||(10333569-10333643)
chr2 (251-321)||(31603407-31603477)
chr2 (248-321)||(16126073-16126146)
chr2 (248-321)||(16333479-16333552)
chr2 (249-321)||(8896271-8896343)
chr2 (245-321)||(38963791-38963867)
chr2 (250-321)||(16127771-16127842)
chr2 (249-321)||(40471736-40471808)
chr2 (249-321)||(41436832-41436904)
chr2 (249-321)||(41575562-41575634)
chr2 (248-321)||(5096247-5096320)
chr2 (249-321)||(6730094-6730166)
chr2 (249-321)||(22718534-22718606)
chr2 (246-321)||(18504469-18504544)
chr2 (249-320)||(37316876-37316947)
chr2 (247-321)||(44022266-44022340)
chr2 (260-321)||(11277562-11277623)
chr2 (248-321)||(20682653-20682726)
chr2 (248-321)||(25766443-25766516)
chr2 (249-321)||(2831707-2831779)
chr2 (248-321)||(25762193-25762266)
chr2 (264-321)||(43328792-43328849)
chr2 (249-321)||(4137410-4137481)
chr2 (249-321)||(6075125-6075197)
chr2 (249-321)||(45036363-45036435)
chr2 (246-321)||(16646243-16646318)
chr2 (256-321)||(15177376-15177441)
chr2 (266-321)||(37987927-37987982)
[»] chr8 (40 HSPs)
chr8 (248-321)||(30464431-30464504)
chr8 (247-321)||(14378675-14378749)
chr8 (247-321)||(25009142-25009216)
chr8 (249-321)||(20671256-20671328)
chr8 (249-321)||(23437802-23437874)
chr8 (249-321)||(28583292-28583364)
chr8 (249-321)||(44887704-44887776)
chr8 (248-321)||(761549-761622)
chr8 (248-321)||(25691586-25691659)
chr8 (249-321)||(4960151-4960223)
chr8 (248-314)||(3466282-3466348)
chr8 (248-321)||(11756775-11756848)
chr8 (249-321)||(4327108-4327180)
chr8 (249-321)||(37094132-37094204)
chr8 (249-321)||(44717296-44717368)
chr8 (247-321)||(8496875-8496949)
chr8 (248-321)||(43184768-43184841)
chr8 (249-321)||(40645609-40645681)
chr8 (248-321)||(38842161-38842235)
chr8 (245-308)||(8123651-8123714)
chr8 (249-320)||(44361921-44361992)
chr8 (279-321)||(21132917-21132959)
chr8 (256-321)||(29917917-29917981)
chr8 (256-321)||(43049258-43049323)
chr8 (246-321)||(8059013-8059086)
chr8 (249-321)||(14584196-14584268)
chr8 (246-314)||(23547065-23547133)
chr8 (249-321)||(30653360-30653432)
chr8 (248-321)||(17523804-17523877)
chr8 (249-314)||(44947018-44947082)
chr8 (249-321)||(5777543-5777615)
chr8 (249-321)||(15870175-15870247)
chr8 (279-321)||(18419028-18419070)
chr8 (248-321)||(40035286-40035359)
chr8 (279-315)||(2026602-2026638)
chr8 (249-321)||(7475374-7475446)
chr8 (253-321)||(10658166-10658234)
chr8 (249-321)||(12893717-12893789)
chr8 (289-321)||(25866103-25866135)
chr8 (257-321)||(44039833-44039897)
[»] scaffold0001 (1 HSPs)
scaffold0001 (249-321)||(183966-184038)
[»] scaffold0500 (1 HSPs)
scaffold0500 (249-321)||(667-739)
[»] scaffold0281 (1 HSPs)
scaffold0281 (249-321)||(13104-13176)
[»] scaffold0204 (1 HSPs)
scaffold0204 (251-314)||(23948-24011)
[»] scaffold1248 (1 HSPs)
scaffold1248 (249-321)||(1448-1520)
[»] scaffold0952 (1 HSPs)
scaffold0952 (249-321)||(793-865)
[»] scaffold0069 (1 HSPs)
scaffold0069 (249-321)||(4441-4513)
[»] scaffold0289 (1 HSPs)
scaffold0289 (249-312)||(9135-9198)
[»] scaffold0283 (1 HSPs)
scaffold0283 (249-314)||(2996-3060)


Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 45560175 - 45559941
Alignment:
Q  16 atttttgtacaaaccaaacaactgaaacaacatcaagatctttttctgctcacacattctaataccaataaaattctacagattcaggagaaacctatac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45560175 atttttgtacaaaccaaacaactgaaacaacatcaagatctttttctgctcacacattctaataccaataaaattttacagattcaggagaaacctatac 45560076  T
Q  116 gtataatcttgctgcaaaatatagtttttcactttcagtctagctgtggagcacatgattgtgcatgtccttggcaatcctttctaggtgatcagtaaaa 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  45560075 gtataatcttgctgcaaaatatagtttttcactttcagtctagctgtggagcacatgattgtgcatgtccttggcaatcctttctaggagatcagtaaaa 45559976  T
Q  216 tctggatgcaatgatgctatagctagtccctatta 250  Q
    |||||||||||||||||||||||||||||||||||    
T  45559975 tctggatgcaatgatgctatagctagtccctatta 45559941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 9484593 - 9484668
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9484593 tattactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 9484668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 29793440 - 29793365
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29793440 tattactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 29793365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 901148 - 901075
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  901148 ttactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgatcatatt 901075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 42098687 - 42098614
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42098687 ttactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 42098614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 48927861 - 48927789
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48927861 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaatttttacctaacttactttgaccatatt 48927789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 49076485 - 49076413
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  49076485 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 49076413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 249 - 314
Target Start/End: Original strand, 29720395 - 29720460
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttga 314  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29720395 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttga 29720460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 12948040 - 12948112
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  12948040 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 12948112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 16434916 - 16434844
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  16434916 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgaccatatt 16434844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 34263763 - 34263691
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  34263763 tactccctccgtcccgcaataaatgacctgtttaaaaatgtgcaattttgacctaacttactttgaccatatt 34263691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 247 - 321
Target Start/End: Original strand, 34555149 - 34555223
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  34555149 attactccctccgtcccgcaataagtgacctgtttgaaaatgtgcatttttgacctaacttactttgaccatatt 34555223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 29455767 - 29455695
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||| | |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29455767 tactccctccgtcctgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 29455695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 50673677 - 50673749
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  50673677 tactccctccgttccgcaataaatgacctgtttgaaaatgtgcaattttgacttaacttactttgaccatatt 50673749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 2643331 - 2643256
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||  ||||||||||||||||    
T  2643331 tattactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgacctagtttactttgaccatatt 2643256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 28959058 - 28958986
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||| ||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||||    
T  28959058 tactccctccgtctcgcaatagatgatctatttaaaaatttgcaattttgacctagcttactttgaccatatt 28958986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 1778358 - 1778433
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| ||||||||||||||||||||| || ||||||||| |||||||||||| || |||||||||||||||||    
T  1778358 tattacttcctccgtcccgcaatagatgacctatttgaaaatttgcaattttgacttagcttactttgaccatatt 1778433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 251 - 310
Target Start/End: Complemental strand, 14751099 - 14751040
Alignment:
Q  251 ctccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttact 310  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14751099 ctccctccctcccgcaatagatgacctgtttgaaaatgtgcaattttgacctaacttact 14751040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 29809342 - 29809417
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||||||||||| || ||||||||| ||||||||||| ||| ||||||| |||||||||    
T  29809342 tattactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgatctagcttacttcgaccatatt 29809417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 254 - 321
Target Start/End: Original strand, 34669613 - 34669680
Alignment:
Q  254 cctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||| ||||||    
T  34669613 cctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgatcatatt 34669680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 53275055 - 53274982
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| |||||||||||||| |||| || |||||||||||||||||||||||||||||| ||||| ||||||    
T  53275055 ttactccttccgtcccgcaataaatgacctatttgaaaatgtgcaattttgacctaacttattttgatcatatt 53274982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 38834024 - 38833952
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||| |||| ||||||||||| |||| |||||| |||||||| ||||||||||||||||||||||||||||||    
T  38834024 tacttcctctgtcccgcaataaatgacctgtttaaaaatgtgtaattttgacctaacttactttgaccatatt 38833952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 44782043 - 44781979
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttacttt 312  Q
    ||||||||||||||||||||||||||| || ||||||||| ||||||||||| ||||||||||||    
T  44782043 ttactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgaactaacttacttt 44781979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 46866343 - 46866407
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttg 313  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| ||||    
T  46866343 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttattttg 46866407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 321
Target Start/End: Original strand, 49818760 - 49818829
Alignment:
Q  252 tccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||| |||||||||||||||||| |  |||||||| |||||||||||||||| ||||||||||||||||    
T  49818760 tcccttcgtcccgcaatagatgatttagttgaaaatttgcaattttgacctaatttactttgaccatatt 49818829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 4464881 - 4464953
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||| || |||||  ||||||||| ||||||    
T  4464881 tactccctccgtcccgcaatagatgatctatttgaaaatttgcaatgttaacctagtttactttgatcatatt 4464953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 4945910 - 4945838
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||| | ||||||||  | ||||| ||| |||||||||||||||||||||||||||||||||    
T  4945910 tactccctccgtcccaccatagatgacgtatttgagaatttgcaattttgacctaacttactttgaccatatt 4945838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 18013529 - 18013457
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||| ||||||||| |  |||||||||||||||||||||| ||| ||||||||| ||||||    
T  18013529 tactccctccgtcccgtaatagatgacccatttgaaaatgtgcaattttgacataatttactttgatcatatt 18013457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 321
Target Start/End: Complemental strand, 38878532 - 38878465
Alignment:
Q  254 cctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||| |||| |||| ||||||||||||||||||||||||| ||| ||| ||||||||||||    
T  38878532 cctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacataaattattttgaccatatt 38878465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 32961246 - 32961318
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| | ||||||||||||||||| |  ||| ||||| |||||||||||||||||||| ||||||||||||    
T  32961246 tactcctttcgtcccgcaatagatgacccatttaaaaatttgcaattttgacctaacttagtttgaccatatt 32961318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 36179195 - 36179123
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||| ||||||||| ||||| || | ||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  36179195 tactctctccgtcccacaataaataacctgtttgaaaatgtgcaattttgacttaatttactttgatcatatt 36179123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 249 - 319
Target Start/End: Original strand, 43169994 - 43170064
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccata 319  Q
    ||||| |||| | ||||||||||||||| |||| ||||| | |||||||||| ||||||||||||||||||    
T  43169994 tactctctccattccgcaatagatgatccgtttaaaaatatacaattttgacttaacttactttgaccata 43170064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 52094155 - 52094081
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| ||||||| |||||||||||||    ||||||||| ||||||||||| |||||||| ||||||||||||    
T  52094155 attacttcctccgttccgcaatagatgactcatttgaaaatttgcaattttgatctaacttaatttgaccatatt 52094081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 1334351 - 1334282
Alignment:
Q  252 tccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||| ||||||||||||| |  |||||||||||| |||||||| |||||||| ||| ||||||||    
T  1334351 tccctccgttccgcaatagatgacccatttgaaaatgtgtaattttgatctaacttaattttaccatatt 1334282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 36364820 - 36364750
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||| |||||||||||| || | || ||||||||||  |||||||||||||||||| ||||||||||||    
T  36364820 tactcccttcgtcccgcaataaataacctatttgaaaatg--caattttgacctaacttattttgaccatatt 36364750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 36594467 - 36594406
Alignment:
Q  260 tcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||| ||||||||  |||||||||||| ||||||||||||||||| ||||| ||||||    
T  36594467 tcccgcaacagatgatccatttgaaaatgtgtaattttgacctaacttattttgatcatatt 36594406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 4229247 - 4229175
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||| ||| |||||| ||||  | ||||||||| ||||||||||||||| |||||||||| ||||||    
T  4229247 tactccctccatcctgcaataaatgacttatttgaaaatttgcaattttgacctagcttactttgatcatatt 4229175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 26759496 - 26759551
Alignment:
Q  266 aatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||| ||||||| ||| ||||| || ||||||||||||||||||||||||||||||    
T  26759496 aataaatgatctatttaaaaatttgtaattttgacctaacttactttgaccatatt 26759551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 53055683 - 53055612
Alignment:
Q  250 actccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||  ||||| |||| |  |||||||||||| ||||||||||||||| | ||||||||||||    
T  53055683 actccctccgtcctacaataaatgaccaatttgaaaatgtgtaattttgacctaactaattttgaccatatt 53055612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 43370310 - 43370356
Alignment:
Q  268 tagatgatctgtttgaaaatgtgcaattttgacctaacttactttga 314  Q
    ||||||| || |||||||||||||||||||||| |||||||||||||    
T  43370310 tagatgacctatttgaaaatgtgcaattttgacataacttactttga 43370356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 315
Target Start/End: Original strand, 47069406 - 47069472
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgac 315  Q
    ||||||||||||||| ||||||||||    ||||||||| | ||||||||||||||| |||||||||    
T  47069406 tactccctccgtcccacaatagatgacacatttgaaaattttcaattttgacctaacctactttgac 47069472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 318
Target Start/End: Original strand, 50035077 - 50035139
Alignment:
Q  256 tccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccat 318  Q
    |||||||||||||||||||   |||| |||| |  ||||||||||||||||||||||||||||    
T  50035077 tccgtcccgcaatagatgactcgtttaaaaagggacaattttgacctaacttactttgaccat 50035139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 43394588 - 43394545
Alignment:
Q  278 gtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||    
T  43394588 gtttgaaaatgtgcaattctgatctaacttattttgaccatatt 43394545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 315
Target Start/End: Complemental strand, 28229104 - 28229038
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgac 315  Q
    ||||||||||||||  |||||||||| || ||||||||||| || | |||||||||| || ||||||    
T  28229104 tactccctccgtcctacaatagatgacctatttgaaaatgttcactattgacctaacatattttgac 28229038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 321
Target Start/End: Original strand, 29588415 - 29588445
Alignment:
Q  291 caattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||||||||||||    
T  29588415 caattttgacctaacttactttgaccatatt 29588445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 315
Target Start/End: Complemental strand, 46818450 - 46818382
Alignment:
Q  249 tactccctccgt--cccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgac 315  Q
    ||||||||||||  | ||||||||||||||  ||| ||||||| ||||||||| |||| ||||||||||    
T  46818450 tactccctccgtgtctcgcaatagatgatccatttaaaaatgtacaattttgatctaatttactttgac 46818382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 3547420 - 3547492
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||| |||||| |||||||||| || ||||| ||| | || | ||||| |||| |||||||||||||||    
T  3547420 tactcccttcgtccctcaatagatgacctatttgacaatatacattattgacttaacatactttgaccatatt 3547492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 6e-31; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 17496386 - 17496314
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17496386 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 17496314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 24798617 - 24798542
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24798617 tattactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 24798542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 2667393 - 2667321
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2667393 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgactatatt 2667321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 2397770 - 2397842
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  2397770 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttactttgaccatatt 2397842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 29795451 - 29795523
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  29795451 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactttaaccatatt 29795523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 2656738 - 2656666
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  2656738 tactccatccgtcccgcaataaatgagctgtttgaaaatgtgcaattttgacctaacttactttgactatatt 2656666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 30699261 - 30699333
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||| |||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  30699261 tactccctccgttccgcaataaatgatctgtttaaaaatgtgtaattttgacctaacttactttgaccatatt 30699333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 32541545 - 32541473
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| |||||||||||| |||||||||||||||| ||||||||||||||||    
T  32541545 tactccctccgtcccgcaataaatgacctgtttgaaaatatgcaattttgacctaatttactttgaccatatt 32541473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 247 - 321
Target Start/End: Original strand, 9022838 - 9022912
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||| |||||| |||| |||||||||||| ||||||||||||||||| |||||||||||||||    
T  9022838 attactccctccgtcctgcaataaatgacctgtttgaaaatatgcaattttgacctaacatactttgaccatatt 9022912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 244 - 321
Target Start/End: Complemental strand, 16661675 - 16661598
Alignment:
Q  244 cctattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||| ||||||||| ||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||| ||||    
T  16661675 cctagtactccctcagtcccgcaatagatgatccatttgaaaatgtgtaattttgacctaacttactttgaccgtatt 16661598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 28483037 - 28483110
Alignment:
Q  249 tactccctcc-gtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  28483037 tactccctcccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactttaaccatatt 28483110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 24949532 - 24949600
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttga 314  Q
    ||||||||||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||||||    
T  24949532 tattactccctccgtcccgcaatagatgacccatttgaaaatgtgcaattttgatctaacttactttga 24949600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 4890196 - 4890122
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||  |||||||||||||  ||| |||||||||||||||||||||| ||||||||||||||||    
T  4890196 attactccctccgtcatgcaatagatgatccatttaaaaatgtgcaattttgacctaatttactttgaccatatt 4890122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 31708893 - 31708965
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||| |||||||||||||| ||| |||||||||||||||||| ||| ||||||||||| ||||    
T  31708893 tactccctccgtcctgcaatagatgatctatttaaaaatgtgcaattttgacttaatttactttgaccgtatt 31708965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 6142575 - 6142503
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| ||||||||  ||||  ||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  6142575 tactccatccgtcccttaataagtgacctgtttgaaaatgtgcaattttgacctaacttactttgatcatatt 6142503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 24825193 - 24825237
Alignment:
Q  277 tgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  24825193 tgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 24825237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 31948709 - 31948637
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||| ||||||||||||||  |||||||||||| |||| |||| ||||||| ||||||||||||    
T  31948709 tactccctccgtctcgcaatagatgatccatttgaaaatgtgtaattatgacttaacttattttgaccatatt 31948637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 995560 - 995635
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||| |||||| ||||  |||||||||||||| |||||||||| || |||||||||| |||||    
T  995560 tattactccctccgtcctgcaataaatgacatgtttgaaaatgtgtaattttgaccaaatttactttgactatatt 995635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 254 - 321
Target Start/End: Original strand, 13358514 - 13358581
Alignment:
Q  254 cctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| || ||||||||||  | |||||||||||| ||||||||||||||||||||||||||||||    
T  13358514 cctccgttccacaatagatgacttatttgaaaatgtgtaattttgacctaacttactttgaccatatt 13358581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 315
Target Start/End: Complemental strand, 10109478 - 10109413
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgac 315  Q
    |||| ||||||||| |||||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  10109478 tacttcctccgtcc-gcaatagatgatccatttaaaaatgtgcaattttgacctaacttactttgac 10109413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 29515092 - 29515022
Alignment:
Q  251 ctccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||  ||||  | | ||||||||||||||||||||||||||||||||||||||| ||||||    
T  29515092 ctccctccgtcccttaataagtaacctgtttgaaaatgtgcaattttgacctaacttactttgatcatatt 29515022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 32673755 - 32673820
Alignment:
Q  256 tccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||| |||||||||||| ||| ||||| ||||||||||| |||||||| ||||||||||||    
T  32673755 tccgtcccgtaatagatgatctatttaaaaatttgcaattttgatctaacttattttgaccatatt 32673820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 2141568 - 2141640
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| ||||||||  ||||  ||| |||||||||||||| |||||||||||||||||||||||| ||||||    
T  2141568 tactccgtccgtcccttaataagtgacctgtttgaaaatgtacaattttgacctaacttactttgatcatatt 2141640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 6188696 - 6188652
Alignment:
Q  277 tgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  6188696 tgtttgaaaatgtgcaattttgacctaacttactttgagcatatt 6188652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 16969408 - 16969450
Alignment:
Q  279 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||| ||| ||||||||||||||||    
T  16969408 tttgaaaatgtgcaattttgacttaatttactttgaccatatt 16969450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 35117310 - 35117352
Alignment:
Q  279 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  35117310 tttgaaaatgtgcaattttaacataacttactttgaccatatt 35117352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 10105818 - 10105883
Alignment:
Q  256 tccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||| ||||||||||   |||| |||||| ||||||||||| ||||||| ||| ||||||||    
T  10105818 tccgtcccacaatagatgactcgtttaaaaatgagcaattttgacttaacttattttaaccatatt 10105883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 16434542 - 16434615
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||  | |||||||| ||||||  ||| |||| |||||| || || |||||||||||||||    
T  16434542 ttactccctccgtcccatattagatgatttgtttggcaatttgcacttttgatctgacatactttgaccatatt 16434615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 9e-30; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 247 - 321
Target Start/End: Original strand, 45299316 - 45299390
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  45299316 attactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 45299390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 1821700 - 1821624
Alignment:
Q  245 ctattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||| ||||||||||  || |||||||||||||||||||||||||||||||||||||||||||    
T  1821700 ctattactccctccgtccggcaatagatggcctatttgaaaatgtgcaattttgacctaacttactttgaccatatt 1821624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 6017517 - 6017445
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6017517 tacttcctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgatctaacttactttgaccatatt 6017445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 8251217 - 8251145
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  8251217 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgatctaacttactttgaccatatt 8251145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 10100581 - 10100509
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  10100581 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 10100509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 26543874 - 26543940
Alignment:
Q  255 ctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  26543874 ctccgtcccgcaataaatgatctgtttgaaaatgtacaattttgacctaacttactttgaccatatt 26543940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 10124108 - 10124181
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| ||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10124108 ttactccatccatcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 10124181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 29253479 - 29253551
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  29253479 tactccatccgtcccgcaatagatgatctatttgaaaatttgcaattttgacctagcttactttgaccatatt 29253551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 31932246 - 31932174
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||  ||||||||||||||||    
T  31932246 tactccctccgtcccgcaatagatgatctatttgaaaatttgcaattttgacctagtttactttgaccatatt 31932174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 52749281 - 52749353
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||| ||||||||||||    
T  52749281 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaatttttacctaacttattttgaccatatt 52749353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 8048819 - 8048744
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||| ||||||||||| || ||||||||| ||||||||||||||| |||| ||||||||||||    
T  8048819 tattactccctccgtcctgcaatagatgacctatttgaaaatttgcaattttgacctagcttattttgaccatatt 8048744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 5606459 - 5606387
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| || |||||||| |||||||||||| |||||||||||| ||||||||    
T  5606459 tactccctccgtcccgcaataaatgacctatttgaaaaagtgcaattttgatctaacttactttaaccatatt 5606387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 7075398 - 7075326
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||| |||||||||| ||||  |||||||||| |||||||||||| |||||||||||||||||||||    
T  7075398 tactccctccatcccgcaataaatgacttgtttgaaaacgtgcaattttgatctaacttactttgaccatatt 7075326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 28490160 - 28490232
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||||||| || ||||||||| |||||||||||| ||  ||||||||||||||||    
T  28490160 tactccctccgtcccgcaatagatgacctatttgaaaatttgcaattttgacatagtttactttgaccatatt 28490232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 41414203 - 41414275
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||| ||||||||| | || ||||||||| ||||||||||||||| |||||||||||||||||    
T  41414203 tactccctccgtcctgcaatagattacctatttgaaaatttgcaattttgacctagcttactttgaccatatt 41414275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 41855789 - 41855717
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||| |||| |||| || ||||||||| ||||||||||||||| |||||||||||||||||    
T  41855789 tactccctccgtcccgtaataaatgacctatttgaaaatttgcaattttgacctagcttactttgaccatatt 41855717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 44240519 - 44240591
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| || ||| ||||| ||||||||||||||| |||||||||||||||||    
T  44240519 tactccctccgtcccgcaataaatgacctatttaaaaatttgcaattttgacctagcttactttgaccatatt 44240591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 44452197 - 44452267
Alignment:
Q  251 ctccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| |||||||||||||||  |  |||||||||||| ||||||||||||||||||||||||||||||    
T  44452197 ctccctctgtcccgcaatagatgtcccatttgaaaatgtgtaattttgacctaacttactttgaccatatt 44452267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 10648252 - 10648197
Alignment:
Q  266 aatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||    
T  10648252 aatagatgatctatttgaaaatgtgtaattttgacctaacttattttgaccatatt 10648197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 40883417 - 40883483
Alignment:
Q  255 ctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||| |||||||||||||||||  ||| |||||||| ||||||||||||||||||||||| ||||||    
T  40883417 ctccatcccgcaatagatgatccatttaaaaatgtgaaattttgacctaacttactttgatcatatt 40883483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 2126652 - 2126724
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||| | |||||||||||||  | ||| |||||||| ||||||||||||| ||||||||||||||||    
T  2126652 tactccctccattccgcaatagatgacttatttaaaaatgtgtaattttgacctaatttactttgaccatatt 2126724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 5945765 - 5945837
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||| ||||||||||||||| ||||  |||||||||||||||||||||||| ||| ||| ||| ||||||||    
T  5945765 tactctctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacataatttattttaaccatatt 5945837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 12685966 - 12685894
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||| ||||||| ||||||||| | |||||||||||||||||||||| |||| ||| ||||| ||||||    
T  12685966 tactcccttcgtcccgtaatagatgacccgtttgaaaatgtgcaattttgatctaatttattttgatcatatt 12685894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 50014629 - 50014557
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||  ||||||||  | ||||||||| ||||||||||| ||| |||||||||||||||||    
T  50014629 tactccctccgtcccgtcatagatgacttatttgaaaatttgcaattttgatctagcttactttgaccatatt 50014557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 52688540 - 52688595
Alignment:
Q  259 gtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgac 315  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||    
T  52688540 gtcccgcaatagatgatca-tttgaaaatgtggaattttgacctaacttactttgac 52688595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 4489067 - 4489133
Alignment:
Q  255 ctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||| | ||| ||||| |||||||||||    
T  4489067 ctccgtcccgcaatagacgatctatttgaaaatttgcaattttaatctagcttacgttgaccatatt 4489133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 48389081 - 48389138
Alignment:
Q  264 gcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| |||| || ||||||||| ||||||||||||||| |||||||||||||||||    
T  48389081 gcaataaatgacctatttgaaaatttgcaattttgacctagcttactttgaccatatt 48389138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 43453233 - 43453161
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||| |||||||    |||| | ||||| ||||||||||||||||| ||||||||||||    
T  43453233 tactccctccgtcccgcattagatgactcatttgcagatgtgtaattttgacctaacttattttgaccatatt 43453161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 9334377 - 9334453
Alignment:
Q  249 tactccctccgtcccgcaatag----atgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||| ||||||||||||    ||||||| ||||||||| || |||||||| ||||||| |||||||||||||    
T  9334377 tactccctctgtcccgcaatagatagatgatctatttgaaaatttgtaattttgatctaacttgctttgaccatatt 9334453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 9358150 - 9358226
Alignment:
Q  249 tactccctccgtcccgcaatag----atgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||| ||||||||||||    ||||||| ||||||||| || |||||||| ||||||| |||||||||||||    
T  9358150 tactccctctgtcccgcaatagatagatgatctatttgaaaatttgtaattttgatctaacttgctttgaccatatt 9358226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 321
Target Start/End: Complemental strand, 31651960 - 31651897
Alignment:
Q  258 cgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||| |||| || ||||||||||||||||||| ||||  |||| ||||||||||||    
T  31651960 cgtcccgcaataaatgacctatttgaaaatgtgcaattttaacctggcttaatttgaccatatt 31651897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 49903740 - 49903681
Alignment:
Q  262 ccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||  ||| |||||||| ||||||||||||| ||||||||| ||||||    
T  49903740 ccgcaatagatgatccatttaaaaatgtgaaattttgacctaatttactttgatcatatt 49903681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 314
Target Start/End: Original strand, 48312029 - 48312093
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttga 314  Q
    ||||||||| |||||||||||||||| |  |||||||||||||||||||| | ||||||| |||||    
T  48312029 tactccctcagtcccgcaatagatgacca-tttgaaaatgtgcaattttggcttaacttattttga 48312093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 33526230 - 33526158
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| |||||| |||||||||||||   ||| |||||||| |||||||| |||| |||||||||| |||||    
T  33526230 tactccatccgtctcgcaatagatgattcatttaaaaatgtgtaattttgatctaatttactttgactatatt 33526158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 38786997 - 38786942
Alignment:
Q  266 aatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||  ||||||||| |||||||||||  ||||||||||||| ||||||    
T  38786997 aatagatgatccatttgaaaatatgcaattttgatataacttactttgatcatatt 38786942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 44741356 - 44741415
Alignment:
Q  262 ccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||| ||||  | |||||| |||||||||||||| |||||||| ||||||||||||    
T  44741356 ccgcaataaatgacatatttgaatatgtgcaattttgatctaacttattttgaccatatt 44741415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 321
Target Start/End: Complemental strand, 33730232 - 33730190
Alignment:
Q  279 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||    
T  33730232 tttgaaaatgtgtaattttgacataacttactttaaccatatt 33730190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 38737377 - 38737443
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttga 314  Q
    |||||||||||||||| ||||||||||||| ||||| |||||  ||| ||||| |||| | ||||||    
T  38737377 ttactccctccgtcccacaatagatgatctatttgacaatgtataatattgacttaacattctttga 38737443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 321
Target Start/End: Original strand, 47912279 - 47912353
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| |||| ||| ||||||||| | || ||| |||||||| ||||||||| ||| ||| ||||||||||||    
T  47912279 attactctctccatcctgcaatagattacctctttaaaaatgtgtaattttgacataatttattttgaccatatt 47912353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 22328223 - 22328150
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||  | |||||||  | ||||| |||||||| | ||||||| || |||||||||||||||    
T  22328223 ttactccctccgtcccatattagatgacttatttgacaatgtgcactattgacctgacatactttgaccatatt 22328150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 3138605 - 3138676
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| | |||||| ||||||||| |  ||||||||||||   ||||||| ||||||||||||||||||||    
T  3138605 tactcccacagtcccgtaatagatgacca-tttgaaaatgtgtgtttttgacataacttactttgaccatatt 3138676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 41855869 - 41855797
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||  |||||||| | || |||||||||| ||| | || ||||||| || ||||||||||||    
T  41855869 tactccctccgtcctacaatagataacctatttgaaaatgagcattattaacctaacatattttgaccatatt 41855797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 5376 - 5448
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5376 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 5448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 30462285 - 30462213
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30462285 tactccctccgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacttaacttactttgaccatatt 30462213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 247 - 321
Target Start/End: Original strand, 38069049 - 38069123
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38069049 attactccctccgttccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 38069123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 16807210 - 16807138
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16807210 tactccctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 16807138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 37101090 - 37101018
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||    
T  37101090 tactccctccgtcccgcaatagatgacctatttgaaaatgtgtaattttgacctaacttactttgaccatatt 37101018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 36819613 - 36819688
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  36819613 tattactccctccgttccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgatcatatt 36819688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 249 - 319
Target Start/End: Complemental strand, 25274081 - 25274011
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccata 319  Q
    |||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25274081 tactccatccgtcctgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccata 25274011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 35693894 - 35693822
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  35693894 tactccctccgtcgcgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttacttcgaccatatt 35693822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 32972393 - 32972319
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||| ||||||||||||||| || ||||||||| ||||| ||||||||| |||||||||||||||||    
T  32972393 attactccctccctcccgcaatagatgacctatttgaaaatttgcaagtttgacctagcttactttgaccatatt 32972319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 40818754 - 40818689
Alignment:
Q  256 tccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||| |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||    
T  40818754 tccgtcccgtaatagatgatctatttgaaaatgtgcaattttgatctaacttactctgaccatatt 40818689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 40231928 - 40232000
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||| |||| || | ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  40231928 tactccctccgtcccgtaataaataacctgtttgaaaatgtgcaattttgacctaatttattttgaccatatt 40232000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 9136729 - 9136654
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||| |||||||||||||||||  ||||| |||||| ||||||||||||  ||| ||||||||||||    
T  9136729 tattactccctccatcccgcaatagatgatccatttgataatgtgtaattttgacctagtttattttgaccatatt 9136654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 40665835 - 40665760
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||| ||||| |||||||||||||| | ||||||||| || ||||||||| || |||||||||||||||||    
T  40665835 tattactccttccgttccgcaatagatgatttatttgaaaatttgtaattttgacttagcttactttgaccatatt 40665760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 4620065 - 4620139
Alignment:
Q  248 ttactccctccgtcccgcaatagatgat-ctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||| |||||||||||| | || |  |||||||||||| ||||||||||||||||||||||||||||||    
T  4620065 ttactccctctgtcccgcaataggtaattcattttgaaaatgtgtaattttgacctaacttactttgaccatatt 4620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 38850708 - 38850774
Alignment:
Q  255 ctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| || |||||||||| |  |||||||||||| ||||||||||||||||||||||||||||||    
T  38850708 ctccgttccacaatagatgacccatttgaaaatgtgtaattttgacctaacttactttgaccatatt 38850774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 321
Target Start/End: Complemental strand, 46242514 - 46242472
Alignment:
Q  279 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  46242514 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 46242472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 28016115 - 28016187
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||| | ||||| ||||| |  ||||||||||||||||||||| |||||||||||||||||||||    
T  28016115 ttactccctccgttctgcaat-gatgacccatttgaaaatgtgcaattttgatctaacttactttgaccatatt 28016187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 47713493 - 47713424
Alignment:
Q  252 tccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| |||||  ||||||||| |  |||||||||||||||||||||||||||||||||||||| ||||    
T  47713493 tccctctgtcccataatagatgacccatttgaaaatgtgcaattttgacctaacttactttgaccgtatt 47713424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 7314409 - 7314337
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||  ||||||||||||| ||||| ||| |||| | |||||||||| |||||||||||||||    
T  7314409 tactccctccgtcctacaatagatgatctatttgagaatttgcactattgacctaacatactttgaccatatt 7314337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 9173400 - 9173328
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||| ||| ||||||||| |  ||| |||| ||| ||||||||||||||||||||||||||||||    
T  9173400 tactccctccgttccggaatagatgaccaatttaaaaacgtgtaattttgacctaacttactttgaccatatt 9173328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 31496709 - 31496637
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||| || ||||||| ||   ||||||||||| |||||||||||||||||||||||||| ||||    
T  31496709 tactccctccgtctcgtaatagataattcatttgaaaatgtacaattttgacctaacttactttgaccgtatt 31496637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 33376775 - 33376847
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||| ||||||||||||||||||  ||||||| | |  ||||||||||||||||||||||||| ||||    
T  33376775 tactccctctgtcccgcaatagatgatccatttgaaattttttaattttgacctaacttactttgaccgtatt 33376847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 18756599 - 18756671
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| ||||| ||| ||||||||| |  ||||||||| ||||||||||||||| ||||||||||| |||||    
T  18756599 tactccatccgttccgtaatagatgacccatttgaaaatatgcaattttgacctatcttactttgactatatt 18756671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 38259484 - 38259556
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||  ||||||||||||||||||  |||||||| |||||||| || |||| ||||||||| ||||||    
T  38259484 tactccctctatcccgcaatagatgatctagttgaaaatttgcaatttcgatctaatttactttgatcatatt 38259556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 42493517 - 42493589
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||| |||||||||| || ||||| |||||||    |||||||||| |||||||||||||||    
T  42493517 tactccctccgtcccacaatagatgacctatttgacaatgtgcgcgattgacctaacatactttgaccatatt 42493589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 19817322 - 19817377
Alignment:
Q  266 aatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||| |||||||||||  |||||| ||||||||||||||||| |||||    
T  19817322 aatagatgatctatttgaaaatgtataattttaacctaacttactttgacaatatt 19817377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 307
Target Start/End: Complemental strand, 35265881 - 35265823
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaactt 307  Q
    |||||||||||||||| |||| ||||  ||||| ||||||| |||||||||||||||||    
T  35265881 tactccctccgtcccgtaataaatgacttgtttaaaaatgtacaattttgacctaactt 35265823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 38441843 - 38441885
Alignment:
Q  279 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  38441843 tttgaaaatgtgtaatttttacctaacttactttgaccatatt 38441885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 41008020 - 41007948
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||| || | ||||||||||    ||| ||||| || ||||||||||||||||||||||||||||||    
T  41008020 tactccctccatctcacaatagatgactcatttaaaaatatgtaattttgacctaacttactttgaccatatt 41007948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 312
Target Start/End: Original strand, 32222548 - 32222613
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttacttt 312  Q
    |||||||||||||| ||| ||||||||| |  | | ||||||||||||||||| |||| |||||||    
T  32222548 attactccctccgttccgtaatagatgacccatctcaaaatgtgcaattttgatctaatttacttt 32222613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 314
Target Start/End: Complemental strand, 36404990 - 36404925
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttga 314  Q
    |||||||||| | || || ||||| |||| ||||||||||||||||||||| ||||| || |||||    
T  36404990 tactccctccatgccccagtagatcatctatttgaaaatgtgcaattttgatctaacgtattttga 36404925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 315
Target Start/End: Complemental strand, 3124212 - 3124144
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgac 315  Q
    ||||||| |||||||| |||||||||||    |||||||||||| |||||||| |||| | ||||||||    
T  3124212 attactctctccgtcctgcaatagatgactcatttgaaaatgtgtaattttgatctaattgactttgac 3124144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 19327328 - 19327380
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttga 299  Q
    ||||||| ||||||||||||||||||||  | ||| ||||| |||||||||||    
T  19327328 attactctctccgtcccgcaatagatgacatatttaaaaatttgcaattttga 19327380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 1098175 - 1098247
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1098175 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 1098247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 14633007 - 14633079
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14633007 tactccctccgtcctgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 14633079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 20040480 - 20040407
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20040480 ttactccctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 20040407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 1781209 - 1781137
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  1781209 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaagttactttgaccatatt 1781137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 252 - 321
Target Start/End: Original strand, 14057711 - 14057780
Alignment:
Q  252 tccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  14057711 tccctccgtcccgcaataaatgatctgtttgaaaatatgcaattttgacctaacttactttgatcatatt 14057780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 19344763 - 19344691
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  19344763 tactccttccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgaccatatt 19344691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 31191241 - 31191169
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||||||||||||||||    
T  31191241 tactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaatttactttgaccatatt 31191169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 33402655 - 33402583
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  33402655 tactccctccgtcccgtaatagatgatctgtttaaaaatgtgtaattttgacctaacttactttgatcatatt 33402583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 40316818 - 40316890
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| |||||||||    
T  40316818 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttacttcgaccatatt 40316890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 41263193 - 41263121
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  41263193 tactccctccgtccctcaataaatgatatgtttaaaaatgtgcaattttgacctaacttactttgaccatatt 41263121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 41410723 - 41410651
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| |||||||||    
T  41410723 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttacttcgaccatatt 41410651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 8627142 - 8627207
Alignment:
Q  256 tccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||    
T  8627142 tccgtcccgcaatagatgacctatttgaaaatgtgcaattttgatctaacttactttgaccatatt 8627207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 13548212 - 13548285
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||  ||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13548212 ttactccctccgtcccttaataagtgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 13548285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 1831351 - 1831423
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||| |||||| |||||||||    
T  1831351 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacataatttacttcgaccatatt 1831423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 20022860 - 20022932
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||| ||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20022860 tacttcctccttctcgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 20022932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 30211799 - 30211733
Alignment:
Q  255 ctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||| |||| |||||| ||||||||||||||||| |||||||||||||||||||||    
T  30211799 ctccgtcccgcaataaatgacctgtttaaaaatgtgcaattttgatctaacttactttgaccatatt 30211733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 14607618 - 14607549
Alignment:
Q  252 tccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||| ||||||||||||    
T  14607618 tccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaatttaatttgaccatatt 14607549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 30721750 - 30721677
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||| |||||||||| ||||  | |||||||||||||||||||||||||||||| ||||||||||||    
T  30721750 ttactccctccatcccgcaataaatgacatatttgaaaatgtgcaattttgacctaacttattttgaccatatt 30721677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 39925203 - 39925275
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||||||||||  ||||||||| || |||||||||| || ||||||||||||||||    
T  39925203 tactccctccgtcccgcaatagatgatccatttgaaaatttgtaattttgaccaaatttactttgaccatatt 39925275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 9936955 - 9936880
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||||| ||||| | ||| ||||||||||||||||| |||| ||| ||||||||||||    
T  9936955 tattactccctccgtcccgcaataaatgatatatttaaaaatgtgcaattttgatctaatttattttgaccatatt 9936880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 247 - 321
Target Start/End: Original strand, 40079979 - 40080053
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||  |||||||||| || ||||||||| | ||||||| |||||||||||||||||||||||    
T  40079979 attactccctccgtcctacaatagatgacctatttgaaaatttacaattttaacctaacttactttgaccatatt 40080053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 10465360 - 10465287
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||| ||||||||||||||| || ||||||||| |  |||||||||||| |||||||||||||||||    
T  10465360 ttactccctccctcccgcaatagatgacctatttgaaaatttataattttgacctatcttactttgaccatatt 10465287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 252 - 321
Target Start/End: Original strand, 34169832 - 34169901
Alignment:
Q  252 tccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||| |||||||||||||||||||| ||||||||| ||||||||||| |||  ||||||||||||||||    
T  34169832 tcccttcgtcccgcaatagatgatctatttgaaaatttgcaattttgatctagtttactttgaccatatt 34169901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 34347474 - 34347539
Alignment:
Q  256 tccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||| ||||||||||||| || |||||||||||| ||||||||| ||||||||||||||||||||    
T  34347474 tccgttccgcaatagatgacctatttgaaaatgtgtaattttgacataacttactttgaccatatt 34347539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 27675540 - 27675612
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| ||||  | ||||||||| ||||||||||||||| |||||||||| ||||||    
T  27675540 tactccctccgtcccgcaataaatgacttatttgaaaatttgcaattttgacctagcttactttgatcatatt 27675612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 30788205 - 30788277
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||| |||| |||| |  |||||||||||| ||||||||| ||||||||||||||||||||    
T  30788205 tactccctccgtcccgtaatatatgacccatttgaaaatgtgtaattttgacataacttactttgaccatatt 30788277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 32110736 - 32110664
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||| ||||||||||| |||  ||||||||||||||||||||| |||| ||||||||||| ||||    
T  32110736 tactccctccgttccgcaatagataatccatttgaaaatgtgcaattttgatctaatttactttgaccgtatt 32110664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 14139935 - 14140007
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||| |||||||||||||||||||  |||||||| ||||||||||| |||  ||||||||| ||||||    
T  14139935 tactccctctgtcccgcaatagatgatctaattgaaaatttgcaattttgatctagtttactttgatcatatt 14140007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 20503112 - 20503040
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||| ||| |||| ||  ||| |||||||| |||||||||||||||||||| |||||||||    
T  20503112 tactccctccgtcccgaaattgatggtccatttaaaaatgtgtaattttgacctaacttacttagaccatatt 20503040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 256 - 315
Target Start/End: Original strand, 2799638 - 2799697
Alignment:
Q  256 tccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgac 315  Q
    ||||| ||| ||||||||| |  |||||||||||||||||||||||||||||||||||||    
T  2799638 tccgttccgtaatagatgacccatttgaaaatgtgcaattttgacctaacttactttgac 2799697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 2551693 - 2551619
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| |||| |||| | ||||||||| |  ||| |||||||||||||||||||||||||| ||| ||||||||    
T  2551693 attacttcctcagtcctgaaatagatgacccatttaaaaatgtgcaattttgacctaacttattttaaccatatt 2551619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 315
Target Start/End: Original strand, 2805814 - 2805863
Alignment:
Q  266 aatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgac 315  Q
    ||||||||| |  |||||||||||||||||||||||||| ||||||||||    
T  2805814 aatagatgacccatttgaaaatgtgcaattttgacctaatttactttgac 2805863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 28142943 - 28143000
Alignment:
Q  264 gcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||| |||  ||||||||||||||||||| | |||| ||||||||||||||||    
T  28142943 gcaatagataatccatttgaaaatgtgcaattttaatctaatttactttgaccatatt 28143000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 41042890 - 41042829
Alignment:
Q  260 tcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||| || | || ||||||||| ||||||||||| ||| |||||||||||||||||    
T  41042890 tcccgcaataaataacctatttgaaaatttgcaattttgatctagcttactttgaccatatt 41042829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 967222 - 967264
Alignment:
Q  279 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||| |||||||||||||||||||||||| || |||||    
T  967222 tttgaaaatttgcaattttgacctaacttactttaactatatt 967264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 35641788 - 35641841
Alignment:
Q  268 tagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||| ||||||| |||||||| |||||| || || |||||||||||||||    
T  35641788 tagatgatatgtttgacaatgtgcatttttgatctgacatactttgaccatatt 35641841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 32474086 - 32474014
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| ||||||   ||||||||| |  |||||||||||| |||||| || ||||||| ||||||||||||    
T  32474086 tactccccccgtccaaaaatagatgacccatttgaaaatgtgtaattttaacataacttattttgaccatatt 32474014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 43447165 - 43447237
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43447165 tactccctccgtcccgtaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 43447237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 247 - 321
Target Start/End: Original strand, 31152659 - 31152733
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31152659 attactccctccgtcccacaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 31152733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 3708253 - 3708325
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3708253 tactccctccgtcccacaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgatcatatt 3708325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 10384848 - 10384920
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  10384848 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttaaccatatt 10384920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 37667837 - 37667765
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  37667837 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttactttgaccatatt 37667765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 39332893 - 39332821
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39332893 tactccctccgtcacgcaataaatgatctgtttgaaaatgtgcaattttgaactaacttactttgaccatatt 39332821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 40411672 - 40411600
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40411672 tactccctccgtcccgtaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 40411600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 55631938 - 55631866
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  55631938 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgaccatatt 55631866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 46608210 - 46608285
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| |||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  46608210 tattacttcctccgtcccgcaataaatgacctgtttgaaaatgtgaaattttgacctaacttactttgaccatatt 46608285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 48380472 - 48380545
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  48380472 ttactccctccgtcccgcaataagtgacctgtttgaaaatgtgcatttttgacctaacttactttgaccatatt 48380545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 254 - 321
Target Start/End: Original strand, 39170963 - 39171030
Alignment:
Q  254 cctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  39170963 cctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttattttgaccatatt 39171030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 247 - 321
Target Start/End: Original strand, 42185272 - 42185346
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||| ||||||||||||    
T  42185272 attactccctccgtcccgcaatagatgatccatttgaaaatttgcaattttgacctaatttagtttgaccatatt 42185346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 31657422 - 31657347
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||||| |||| || ||| ||||| ||||||||||||||| |||||||||||||||||    
T  31657422 tattactccctccgtcccgcaataaatgacctatttaaaaatttgcaattttgacctagcttactttgaccatatt 31657347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 8525480 - 8525407
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||  |||| |||| |||||||||||| |||||||||||||||||||||||||| ||||||    
T  8525480 ttactccctccgtcccataataaatgacctgtttgaaaatatgcaattttgacctaacttactttgatcatatt 8525407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 29821050 - 29821122
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| | ||||||| |||||||||||  ||||||||||||||||||||| |||||||||||||||||||||    
T  29821050 tactcctttcgtcccgtaatagatgatccatttgaaaatgtgcaattttgatctaacttactttgaccatatt 29821122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 43047387 - 43047459
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||| ||||| |||||||||| ||||  ||||||||||||||||||||| |||||||||||||||||||||||    
T  43047387 tacttcctccatcccgcaataaatgacttgtttgaaaatgtgcaattttaacctaacttactttgaccatatt 43047459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 249 - 320
Target Start/End: Complemental strand, 28899134 - 28899063
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatat 320  Q
    ||||||||| |||||||||||||||| || ||||||||| |||||||||||||||  |||||||||||||||    
T  28899134 tactccctctgtcccgcaatagatgacctatttgaaaatttgcaattttgacctagtttactttgaccatat 28899063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 33394074 - 33394149
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| |||||||||| |||||| ||| |  ||| |||||||||||||||||||||||||||||||||||||||    
T  33394074 tattacttcctccgtcccacaataggtgacccatttaaaaatgtgcaattttgacctaacttactttgaccatatt 33394149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 48336489 - 48336426
Alignment:
Q  251 ctccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttga 314  Q
    ||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||    
T  48336489 ctccctccgtcccgcaatagatgacacatttgaaaatgtgcaattttgacctaacttactttga 48336426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 1613275 - 1613209
Alignment:
Q  255 ctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||| ||||||||| || |||||||||||| ||||||||||||| ||||||||||||||||    
T  1613275 ctccgtcccgtaatagatgacctatttgaaaatgtgtaattttgacctaatttactttgaccatatt 1613209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 247 - 321
Target Start/End: Original strand, 6520433 - 6520507
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||| |||||||||||||| |||| || ||||||||| ||||||||||||||| ||||||||||| |||||    
T  6520433 attactccatccgtcccgcaataaatgacctatttgaaaatttgcaattttgacctagcttactttgactatatt 6520507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 28914368 - 28914440
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||| |||||||| || | |||||| ||||| | |||||||||||||||||||||||||||||||    
T  28914368 tactccctccgttccgcaataaataaactgtttcaaaatttacaattttgacctaacttactttgaccatatt 28914440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 39376939 - 39376863
Alignment:
Q  245 ctattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||||||||||||  |  |||||||| |||||||||||||||  |||||||||| |||||    
T  39376939 ctattactccctccgtcccgcaatagatgacttagttgaaaatttgcaattttgacctagtttactttgacaatatt 39376863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 249 - 320
Target Start/End: Complemental strand, 24334444 - 24334373
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatat 320  Q
    ||||||||  |||||||||||||||| || ||||||||| |||||||||||||||  |||||||||||||||    
T  24334444 tactccctttgtcccgcaatagatgacctatttgaaaatttgcaattttgacctagtttactttgaccatat 24334373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 1377503 - 1377575
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||  ||||||||||| | || || ||||||||| ||||||||||||||| |||||||||||||||||    
T  1377503 tactccctttgtcccgcaataaacgacctatttgaaaatttgcaattttgacctatcttactttgaccatatt 1377575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 23605965 - 23605893
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||| |||| |||||||||| ||||||| ||||||||| | ||||||||||||| |||||||||| ||||||    
T  23605965 tactctctccatcccgcaataaatgatctatttgaaaatttacaattttgacctagcttactttgatcatatt 23605893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 28988457 - 28988385
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||| |||||||||||||||| || ||||||||| || ||| ||||||||  ||||||||||||||||    
T  28988457 tactccctcagtcccgcaatagatgacctatttgaaaatttgtaatgttgacctagtttactttgaccatatt 28988385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 53987846 - 53987771
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| |||| ||||  ||||||||||||  ||| |||||||||||| || |||||||||||||||||||||||    
T  53987846 tattacttcctctgtcctacaatagatgatccatttaaaaatgtgcaatattaacctaacttactttgaccatatt 53987771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 321
Target Start/End: Complemental strand, 47834202 - 47834135
Alignment:
Q  254 cctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||| ||| |||||    |||||||||||| ||||||||| ||||||||||||||||||||    
T  47834202 cctccgtcccggaatggatgacacatttgaaaatgtgtaattttgacataacttactttgaccatatt 47834135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 1981429 - 1981373
Alignment:
Q  265 caatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| ||||  ||||||||| || |||||||| |||||||||||||||||||||    
T  1981429 caatagacgatccatttgaaaatttgtaattttgatctaacttactttgaccatatt 1981373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 50684936 - 50684992
Alignment:
Q  265 caatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||| |||| ||| ||||| ||||||||||| |||||||||||||| ||||||    
T  50684936 caatagataatctatttaaaaatatgcaattttgatctaacttactttgatcatatt 50684992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 321
Target Start/End: Original strand, 37164033 - 37164088
Alignment:
Q  266 aatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||| |  ||||||||| | ||||||||||||||||||||||||| |||||    
T  37164033 aatagatgacccatttgaaaatatacaattttgacctaacttactttgactatatt 37164088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 52818742 - 52818680
Alignment:
Q  255 ctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgacca 317  Q
    |||| |||||||||||||||    |||||||||||| |||||| |||||| ||||||||||||    
T  52818742 ctccctcccgcaatagatgactcatttgaaaatgtgtaattttaacctaatttactttgacca 52818680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 312
Target Start/End: Complemental strand, 4860142 - 4860078
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttacttt 312  Q
    ||||||| ||||||||  |||||||||| || ||||||| |||||||| ||||||||| |||||||    
T  4860142 attactctctccgtcctacaatagatgacctatttgaaa-tgtgcaatattgacctaagttacttt 4860078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 18881420 - 18881348
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||  |||||||||| || |||||||||||| | | ||||| |||  ||||||||| |||||    
T  18881420 tactccctccgtcctacaatagatgacctatttgaaaatgtgaactattgacttaatatactttgactatatt 18881348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 44210149 - 44210221
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| || ||| ||| | |||||||||||  |   ||||||||||||||||    
T  44210149 tactccctccgtcccgcaataaatgacctatttaaaattttgcaattttgatatggattactttgaccatatt 44210221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 8373434 - 8373506
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8373434 tactccctctgtcccgcaataaatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 8373506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 7724672 - 7724602
Alignment:
Q  251 ctccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7724672 ctccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 7724602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 12208988 - 12209061
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12208988 ttacttcctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 12209061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 10333643 - 10333569
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||| || |||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  10333643 attactccctccgtctcgtaataaatgatctgtttgaaaatgtgtaattttgacctaacttattttgaccatatt 10333569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 31603477 - 31603407
Alignment:
Q  251 ctccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  31603477 ctccctccgtcccacaataaatgacctgtttgaaaatgtgcaattttgacctaacttactttgacaatatt 31603407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 16126146 - 16126073
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| ||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  16126146 ttactctctccgtcccgcaataaatgacccatttgaaaatgtgcaattttgacctaacttactttgaccatatt 16126073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 16333479 - 16333552
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| ||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  16333479 ttactctctccgtcccgcaataaatgacccatttgaaaatgtgcaattttgacctaacttactttgaccatatt 16333552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 8896271 - 8896343
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||| | ||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  8896271 tactccctccattccgcaatagatgacccatttgaaaatgtgcaattttgacctaacttactttgaccatatt 8896343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 38963791 - 38963867
Alignment:
Q  245 ctattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||| |||||  ||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38963791 ctattactccctctgtcccttaataagtgacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 38963867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 16127842 - 16127771
Alignment:
Q  250 actccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||| |||| || |||||||||||| ||||||||||||||||||||||| ||||||    
T  16127842 actccctccgtcccgcaataaatgacctatttgaaaatgtgtaattttgacctaacttactttgatcatatt 16127771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 40471736 - 40471808
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| || | ||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  40471736 tactccctccgtcccgcaataaataacctgtttgaaaatgtgcaattttgacttaacttattttgatcatatt 40471808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 41436832 - 41436904
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||| |||| ||||  |||||||||||||  ||||||||||||||||||||||||||||||    
T  41436832 tactccctccgtcccgtaataaatgaaatgtttgaaaatgtataattttgacctaacttactttgaccatatt 41436904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 41575562 - 41575634
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| || ||||||||| ||||||||||||||| |||||||||| ||||||    
T  41575562 tactccctccgtcccgcaataaatgacctatttgaaaatttgcaattttgacctagcttactttgatcatatt 41575634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 5096247 - 5096320
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||| || | |||||||||||||| |||||||||| ||||||| ||||| ||||||    
T  5096247 ttactccctccgtcccgcaataaattacctgtttgaaaatgtacaattttgacataacttattttgatcatatt 5096320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 6730166 - 6730094
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||| |||||||||||| ||  |||||||| ||||||||||||||| ||||| |||||||||||    
T  6730166 tactccctccgtctcgcaatagatgacctacttgaaaatttgcaattttgacctagcttacattgaccatatt 6730094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 22718606 - 22718534
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||| ||||||| || |||| ||||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  22718606 tactctctccgtcgcgtaataaatgatctatttgaaaatttgcaattttgacctagcttactttgaccatatt 22718534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 18504469 - 18504544
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| ||||||||||| |||||||||  | |||||||||||| ||||||||| ||||||| ||||||||||||    
T  18504469 tattacttcctccgtcccgtaatagatgacttatttgaaaatgtgtaattttgacgtaacttattttgaccatatt 18504544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 249 - 320
Target Start/End: Original strand, 37316876 - 37316947
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatat 320  Q
    |||||||||||||||||||| ||||| || ||||||||| ||||||||||||||   |||||||||||||||    
T  37316876 tactccctccgtcccgcaatcgatgacctatttgaaaatttgcaattttgacctggtttactttgaccatat 37316947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 321
Target Start/End: Original strand, 44022266 - 44022340
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||| | ||||  ||||||||||||  |||||||||||||||||||| ||||||||||||||||| |||||    
T  44022266 attactccattcgtcatgcaatagatgattcgtttgaaaatgtgcaattttaacctaacttactttgactatatt 44022340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 11277562 - 11277623
Alignment:
Q  260 tcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||| |||| || |||||||||||||||||||||| ||||||||||||| ||||||    
T  11277562 tcccgcaataaatgacctatttgaaaatgtgcaattttgacataacttactttgatcatatt 11277623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 20682653 - 20682726
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||||| ||| || ||| ||||| ||||||||||||| | ||||||||||| |||||    
T  20682653 ttactccctccgtcccgcaatagttgacctatttaaaaatttgcaattttgacccagcttactttgacaatatt 20682726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 25766443 - 25766516
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| ||||||| | ||||||||||||||||||||||||||| | |||||||||  ||||| |||||||||    
T  25766443 ttactccttccgtcctgtaatagatgatctgtttgaaaatgtgcactattgacctaatatacttcgaccatatt 25766516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 2831707 - 2831779
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| |||| |||| ||| ||||||  ||| |||||||| ||||||||||||||||||||||||||||||    
T  2831707 tactcccaccgtaccgcgataaatgatccatttaaaaatgtgtaattttgacctaacttactttgaccatatt 2831779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 25762193 - 25762266
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||   ||||||||||||||||||||||||||| | |||||||||  ||||| |||| ||||    
T  25762193 ttactccctccgtcctataatagatgatctgtttgaaaatgtgcactattgacctaatatacttcgaccctatt 25762266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 43328849 - 43328792
Alignment:
Q  264 gcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||  |||||||||||  |||||||| |||||||||||||||||||||    
T  43328849 gcaatagatgatccatttgaaaatgtataattttgatctaacttactttgaccatatt 43328792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 4137410 - 4137481
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| ||||  ||||||||||||| ||||||||| |||| ||| ||||| ||||||    
T  4137410 tactccctccgtcccgcaataaatgacatgtttgaaaatgtacaattttgatctaattta-tttgatcatatt 4137481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 6075125 - 6075197
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||| |||||||| ||||||||||||   |||||||||| | |||||||||  ||||||||||||||||||||    
T  6075125 tactacctccgtcgcgcaatagatgactcgtttgaaaattttcaattttgatttaacttactttgaccatatt 6075197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 45036363 - 45036435
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||| ||||||||||| |  ||| |||||||| ||||||||| ||||||||  ||||||||||    
T  45036363 tactccctccgtcctgcaatagatgacccatttaaaaatgtgtaattttgacttaacttacgctgaccatatt 45036435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 16646243 - 16646318
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||| |||||| ||||| ||||| |||| || ||| ||||| || |||||||||||| |||||||||||||||||    
T  16646243 tattattccctcagtcccacaataaatgagctatttaaaaatttgtaattttgacctagcttactttgaccatatt 16646318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 15177376 - 15177441
Alignment:
Q  256 tccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| || ||||||||| || ||||||||||| ||||||| |  ||||||||||||||||||||    
T  15177376 tccgtctcgtaatagatgacctatttgaaaatgtacaattttaatttaacttactttgaccatatt 15177441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 321
Target Start/End: Complemental strand, 37987982 - 37987927
Alignment:
Q  266 aatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||| |||| ||||||||||||| |||||||||| |||| ||||||||| ||||||    
T  37987982 aataaatgacctgtttgaaaatgcgcaattttgatctaagttactttgatcatatt 37987927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 9e-27; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 30464431 - 30464504
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  30464431 ttactccctccgtcccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 30464504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 14378749 - 14378675
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||| |||||    
T  14378749 attactccctccgtcccgcaataaatgataggtttgaaaatgtgcaattttgacctaacttactttgactatatt 14378675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 247 - 321
Target Start/End: Original strand, 25009142 - 25009216
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25009142 attacttcctccgtccctcaataaatgatctgtttgaaaatgtgcaattttgacctaatttactttgaccatatt 25009216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 20671256 - 20671328
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  20671256 tactccctccgtcgcgcaatagatgatcaatttgaaaatgtgtaattttgacctaacttactttgaccatatt 20671328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 23437874 - 23437802
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| || |||||||||||||    
T  23437874 tactccctccgtcccgcaataaatgacctgtttgaaaatgtgcaattttgacctaatttgctttgaccatatt 23437802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 28583364 - 28583292
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| ||||||    
T  28583364 tactccctccgtcccgcaatagatgacctttttgaaaatgtgcaattttgacctaatttactttgagcatatt 28583292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 44887776 - 44887704
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  44887776 tactccctccgtcccgcaataaatgatctatttgaaaatgtgcaattttgacctgacttagtttgaccatatt 44887704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 761549 - 761622
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||| ||||||||||| |||| ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  761549 ttactccctctgtcccgcaataaatgacctgtttgaaaatgtgtaattttgacctaatttactttgaccatatt 761622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 25691659 - 25691586
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| ||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  25691659 ttactccatccgttccgcaataaatgacatgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 25691586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 4960151 - 4960223
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| ||||||||| |||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||    
T  4960151 tactccttccgtcccgtaatagatgatctatttgaaaatttgcaattttgacctagcttactttgaccatatt 4960223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 248 - 314
Target Start/End: Original strand, 3466282 - 3466348
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttga 314  Q
    ||||||||||||||||||||||||||| |  |||||||||| |||||||||||||||||||||||||    
T  3466282 ttactccctccgtcccgcaatagatgacccatttgaaaatgcgcaattttgacctaacttactttga 3466348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 11756775 - 11756848
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||| || |||||||||||||  | ||||||||| |||||||||||||||||||||||||||||||||    
T  11756775 ttactccctctgttccgcaatagatgacttatttgaaaatttgcaattttgacctaacttactttgaccatatt 11756848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 4327180 - 4327108
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||| |||||||||||| ||||  ||||||||||||||||||||||| |||||||||||||| ||||||    
T  4327180 tactccctgcgtcccgcaataaatgacttgtttgaaaatgtgcaattttgatctaacttactttgatcatatt 4327108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 37094132 - 37094204
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||| |||||||||||||||| |||| || ||||||||| ||||||||||||||| |||||||||||||||||    
T  37094132 tacttcctccgtcccgcaataaatgacctatttgaaaatttgcaattttgacctagcttactttgaccatatt 37094204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 44717296 - 44717368
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||| |||||||  |||||||||||| |||||||| |||||||||||||| ||||||    
T  44717296 tactccctccgtcccgcaatggatgatccatttgaaaatgtgtaattttgaactaacttactttgatcatatt 44717368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 8496949 - 8496875
Alignment:
Q  247 attactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| |||||||| | ||||| ||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  8496949 attactctctccgtcctgtaatagttgacccatttgaaaatgtgcaattttgacctaacttactttgaccatatt 8496875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 43184841 - 43184768
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||| ||| |||||| |||| |||||| ||||||||  |||||||||||||||||||||||||||||    
T  43184841 ttactccctccatcctgcaataaatgacctgtttaaaaatgtgttattttgacctaacttactttgaccatatt 43184768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 40645609 - 40645681
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||||||  |  ||||||||| | |||||||||||||||||||||||| ||||||    
T  40645609 tactccctccgtcccgcaatagatggcccatttgaaaattttcaattttgacctaacttactttgatcatatt 40645681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 38842161 - 38842235
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaa-tgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||| ||||||||||| |||| |||| ||||||||||| |||| ||||||||||||||||||||||| ||||||    
T  38842161 ttacttcctccgtcccgtaataaatgacctgtttgaaaaatgtgtaattttgacctaacttactttgatcatatt 38842235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 8123651 - 8123714
Alignment:
Q  245 ctattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaactta 308  Q
    |||||||||||||||| | |||||||||||||  ||| |||||||| |||||||||||||||||    
T  8123651 ctattactccctccgttctgcaatagatgatccatttaaaaatgtgtaattttgacctaactta 8123714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 320
Target Start/End: Original strand, 44361921 - 44361992
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatat 320  Q
    |||||||||  ||||||||||||||| || ||||||||| ||||||||||| |||  |||||||||||||||    
T  44361921 tactccctcattcccgcaatagatgacctatttgaaaatttgcaattttgagctagtttactttgaccatat 44361992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 279 - 321
Target Start/End: Complemental strand, 21132959 - 21132917
Alignment:
Q  279 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  21132959 tttgaaaatgtgcaattttgacttaacttactttgaccatatt 21132917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 29917981 - 29917917
Alignment:
Q  256 tccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| |||||||||||||  ||| |||||||| ||||||||||||||||| ||||||||||||    
T  29917981 tccgtcctgcaatagatgatccattt-aaaatgtgtaattttgacctaacttattttgaccatatt 29917917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 256 - 321
Target Start/End: Complemental strand, 43049323 - 43049258
Alignment:
Q  256 tccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||| ||||||| ||||||||| || |||||||| ||| || ||||||||||||||    
T  43049323 tccgtcccgcaataaatgatctatttgaaaatttgtaattttgatctagctaactttgaccatatt 43049258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 8059086 - 8059013
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||| |||||| ||||||||||||||  |||||||||||| ||||||  | ||||||| ||||||||||||    
T  8059086 tattactccttccgtcacgcaatagatgatcaatttgaaaatgtgtaatttt--cttaacttattttgaccatatt 8059013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 14584268 - 14584196
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||||  |||||||||||| ||||||||| |  |||||||| ||| |||||||||| ||||||    
T  14584268 tactccctccgtcccataatagatgatctatttgaaaatttataattttgatctagcttactttgatcatatt 14584196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 246 - 314
Target Start/End: Original strand, 23547065 - 23547133
Alignment:
Q  246 tattactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttga 314  Q
    ||||||||||||||||||  |||| |||| |||||| ||| |||| |||||||| ||||||||||||||    
T  23547065 tattactccctccgtcccataataaatgacctgtttaaaattgtgtaattttgatctaacttactttga 23547133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 30653360 - 30653432
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| ||||||||| ||||||||  |  ||| ||||||||||||||| | |||||||||||||||||||||    
T  30653360 tactccatccgtcccgtaatagatgcccaatttaaaaatgtgcaattttaatctaacttactttgaccatatt 30653432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 17523804 - 17523877
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||| ||||| |||  |||||||||| |  |||||||||||||| |||| |||||||||||||||| ||||||    
T  17523804 ttacttcctccctcctacaatagatgacccatttgaaaatgtgcagttttaacctaacttactttgatcatatt 17523877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 314
Target Start/End: Original strand, 44947018 - 44947082
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttga 314  Q
    |||||||||||||| ||||||||||| |  ||| |||||||||||||||||||||  |||||||||    
T  44947018 tactccctccgtcc-gcaatagatgacccatttaaaaatgtgcaattttgacctattttactttga 44947082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 5777615 - 5777543
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| ||| ||| |||||| |||| ||||||||||||||| |||||||| ||| |||| ||| ||||||||    
T  5777615 tactccatccatcctgcaataaatgacctgtttgaaaatgtgtaattttgatctatcttattttaaccatatt 5777543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 15870175 - 15870247
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||||||||||| | |||| || | |||||||||||||  ||||||||| |||| ||||||||| ||||||    
T  15870175 tactccctccgtccagtaataaataacctgtttgaaaatgaacaattttgatctaatttactttgatcatatt 15870247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 18419028 - 18419070
Alignment:
Q  279 tttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||| || |||||||||||| |||||||||||||||||    
T  18419028 tttgaaaatttgtaattttgacctagcttactttgaccatatt 18419070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 40035286 - 40035359
Alignment:
Q  248 ttactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||| ||||||  |||||||||||||  ||||||||| ||||||||||| |||| ||| ||| | ||||||    
T  40035286 ttactccatccgtcatgcaatagatgatccatttgaaaatttgcaattttgatctaatttagtttaatcatatt 40035359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 315
Target Start/End: Original strand, 2026602 - 2026638
Alignment:
Q  279 tttgaaaatgtgcaattttgacctaacttactttgac 315  Q
    |||||||||||  ||||||||||||||||||||||||    
T  2026602 tttgaaaatgtttaattttgacctaacttactttgac 2026638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 7475446 - 7475374
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||| || |||||||||||||  | ||| ||||| ||||||||| | ||| |||||||||| ||||||    
T  7475446 tactccctcagttccgcaatagatgacgtatttaaaaatttgcaattttaatctagcttactttgatcatatt 7475374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 10658234 - 10658166
Alignment:
Q  253 ccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||  ||||||||||||| ||||| ||| | || | ||||| |||| |||||||||||||||    
T  10658234 ccctccgtccttcaatagatgatctatttgacaatatacattattgacttaacatactttgaccatatt 10658166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 12893789 - 12893717
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||| || || |||| || ||||| ||| |||| | ||||| |||| |||||||||||||||    
T  12893789 tactccctccgtccctcagtaaatgacctatttgacaatatgcattattgacttaacatactttgaccatatt 12893717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 321
Target Start/End: Original strand, 25866103 - 25866135
Alignment:
Q  289 tgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||| |||||||||||||||||||||    
T  25866103 tgcaattttgatctaacttactttgaccatatt 25866135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 44039833 - 44039897
Alignment:
Q  257 ccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| |||||| ||||||  ||||||||||||||||||||| ||  |||| ||||| ||||||    
T  44039833 ccgtcctgcaataaatgatccatttgaaaatgtgcaattttgatctggcttagtttgatcatatt 44039897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 183966 - 184038
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||| ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||    
T  183966 tactccctccgtctcgcaataaataacctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 184038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 739 - 667
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||| |||||||||||||| |  ||||||||| |||||||||||||||||||| ||||||||||||    
T  739 tactccctccgccccgcaatagatgacccatttgaaaatatgcaattttgacctaacttagtttgaccatatt 667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0281 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 13104 - 13176
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||||||||||||| ||||| |||| |||||| ||||| ||||||||||||||| |||||||||||||||||    
T  13104 tactccctccgtcccacaataaatgacctgtttaaaaatttgcaattttgacctagcttactttgaccatatt 13176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 24011 - 23948
Alignment:
Q  251 ctccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttga 314  Q
    ||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||    
T  24011 ctccctccgtcccgcaatagatgacacatttgaaaatgtgcaattttgacctaacttactttga 23948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1248 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 1520 - 1448
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||| |||| ||||| |||||||||| | ||| |||||||| ||||||||| ||||||||||||||||||||    
T  1520 tactctctccatcccgtaatagatgatttatttaaaaatgtgtaattttgacataacttactttgaccatatt 1448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 793 - 865
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    ||||| |||| ||||| |||||||||| | ||| |||||||| ||||||||| ||||||||||||||||||||    
T  793 tactctctccatcccgtaatagatgatttatttaaaaatgtgtaattttgacataacttactttgaccatatt 865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 4441 - 4513
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttgaccatatt 321  Q
    |||||| ||||||| |||||| |||||   ||| |||||||||||||||||||||||||| ||||||| ||||    
T  4441 tactccttccgtcctgcaataaatgattcatttaaaaatgtgcaattttgacctaacttattttgaccgtatt 4513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 312
Target Start/End: Original strand, 9135 - 9198
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttacttt 312  Q
    ||||| |||||| | || ||||||||||  ||||||||||||||||||||| ||||||||||||    
T  9135 tactctctccgttctgcgatagatgatccatttgaaaatgtgcaattttgatctaacttacttt 9198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 314
Target Start/End: Original strand, 2996 - 3060
Alignment:
Q  249 tactccctccgtcccgcaatagatgatctgtttgaaaatgtgcaattttgacctaacttactttga 314  Q
    |||||||||||||| ||||||||||| |  ||| |||||||||||||||||||||  |||||||||    
T  2996 tactccctccgtcc-gcaatagatgacccatttaaaaatgtgcaattttgacctattttactttga 3060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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