View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17945_high_15 (Length: 433)

Name: NF17945_high_15
Description: NF17945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17945_high_15
NF17945_high_15
[»] chr3 (28 HSPs)
chr3 (11-419)||(33914575-33914983)
chr3 (249-415)||(1475296-1475463)
chr3 (248-414)||(13911196-13911363)
chr3 (280-415)||(25919478-25919616)
chr3 (249-413)||(19219229-19219394)
chr3 (280-417)||(21017840-21017978)
chr3 (248-415)||(8402566-8402734)
chr3 (284-415)||(10341763-10341894)
chr3 (273-408)||(16970196-16970331)
chr3 (317-414)||(2729635-2729733)
chr3 (257-392)||(12409399-12409533)
chr3 (280-411)||(12573252-12573385)
chr3 (280-411)||(13549716-13549849)
chr3 (248-412)||(11521071-11521235)
chr3 (326-407)||(19263922-19264004)
chr3 (314-414)||(25883100-25883201)
chr3 (332-414)||(21829149-21829232)
chr3 (333-408)||(18065832-18065905)
chr3 (326-414)||(26297758-26297847)
chr3 (340-414)||(27415194-27415266)
chr3 (325-415)||(23007081-23007172)
chr3 (345-414)||(4775724-4775794)
chr3 (340-409)||(19546005-19546075)
chr3 (294-414)||(4780704-4780824)
chr3 (339-414)||(11474868-11474944)
chr3 (249-340)||(17637035-17637126)
chr3 (337-413)||(33577754-33577831)
chr3 (284-352)||(10303427-10303495)
[»] chr8 (19 HSPs)
chr8 (273-415)||(14977122-14977266)
chr8 (279-418)||(12956451-12956591)
chr8 (279-415)||(28901356-28901493)
chr8 (273-415)||(24120187-24120331)
chr8 (248-415)||(16052293-16052461)
chr8 (247-408)||(16054224-16054386)
chr8 (279-415)||(32239249-32239386)
chr8 (280-414)||(13081954-13082090)
chr8 (314-414)||(5570158-5570259)
chr8 (294-392)||(29047359-29047454)
chr8 (332-415)||(35135438-35135522)
chr8 (284-396)||(28902056-28902168)
chr8 (279-386)||(6358660-6358767)
chr8 (332-418)||(24584737-24584824)
chr8 (249-412)||(11310223-11310387)
chr8 (332-414)||(27097818-27097901)
chr8 (280-343)||(28252470-28252533)
chr8 (335-415)||(10867006-10867087)
chr8 (339-415)||(14424828-14424905)
[»] chr1 (26 HSPs)
chr1 (246-414)||(11770011-11770180)
chr1 (248-415)||(30675414-30675583)
chr1 (273-412)||(12810278-12810418)
chr1 (273-415)||(26657432-26657575)
chr1 (279-415)||(50047143-50047280)
chr1 (249-390)||(8247699-8247840)
chr1 (279-415)||(23223373-23223511)
chr1 (249-415)||(12423930-12424097)
chr1 (249-414)||(25730588-25730754)
chr1 (313-414)||(25494496-25494598)
chr1 (280-414)||(34381671-34381806)
chr1 (249-418)||(23519771-23519939)
chr1 (248-391)||(21451857-21451999)
chr1 (280-392)||(25266385-25266496)
chr1 (340-415)||(26102080-26102156)
chr1 (279-414)||(18301020-18301158)
chr1 (281-412)||(18391046-18391178)
chr1 (294-373)||(24903354-24903433)
chr1 (345-415)||(25727925-25727996)
chr1 (345-415)||(25736333-25736404)
chr1 (273-340)||(30781715-30781783)
chr1 (332-409)||(25126495-25126573)
chr1 (335-415)||(19884190-19884271)
chr1 (273-330)||(25777933-25777990)
chr1 (378-414)||(31313613-31313650)
chr1 (347-414)||(27461198-27461266)
[»] chr5 (26 HSPs)
chr5 (273-420)||(17382046-17382194)
chr5 (248-415)||(24841684-24841852)
chr5 (257-415)||(17027467-17027626)
chr5 (280-415)||(24517317-24517453)
chr5 (279-412)||(18222455-18222589)
chr5 (249-414)||(25594709-25594875)
chr5 (314-418)||(16634043-16634148)
chr5 (312-414)||(25680591-25680694)
chr5 (249-412)||(15205577-15205739)
chr5 (253-414)||(12340031-12340191)
chr5 (279-357)||(30072140-30072218)
chr5 (332-412)||(23157807-23157888)
chr5 (279-414)||(16622684-16622819)
chr5 (249-415)||(22229741-22229903)
chr5 (336-415)||(24268574-24268654)
chr5 (336-415)||(24345203-24345283)
chr5 (332-414)||(24410946-24411029)
chr5 (284-415)||(11274346-11274479)
chr5 (332-412)||(20083480-20083561)
chr5 (334-409)||(7742891-7742967)
chr5 (279-395)||(22967879-22967995)
chr5 (291-414)||(26330084-26330209)
chr5 (362-415)||(18873059-18873111)
chr5 (332-412)||(19331526-19331607)
chr5 (279-415)||(26070436-26070573)
chr5 (332-392)||(20694655-20694715)
[»] chr7 (18 HSPs)
chr7 (279-396)||(29544481-29544598)
chr7 (249-415)||(7142030-7142197)
chr7 (273-418)||(23124857-23125002)
chr7 (294-415)||(22067822-22067944)
chr7 (312-414)||(1255230-1255333)
chr7 (282-411)||(20470830-20470960)
chr7 (335-414)||(21545816-21545896)
chr7 (280-414)||(7815285-7815421)
chr7 (279-381)||(20446200-20446303)
chr7 (332-415)||(30405611-30405694)
chr7 (314-415)||(315182-315284)
chr7 (333-413)||(20461665-20461746)
chr7 (248-380)||(21471728-21471860)
chr7 (332-415)||(4828806-4828890)
chr7 (279-414)||(46054660-46054796)
chr7 (332-414)||(3268982-3269065)
chr7 (294-414)||(2632453-2632574)
chr7 (332-392)||(7372606-7372666)
[»] chr2 (20 HSPs)
chr2 (247-414)||(21505156-21505324)
chr2 (248-415)||(28278439-28278606)
chr2 (249-392)||(35707735-35707878)
chr2 (249-415)||(25473969-25474136)
chr2 (312-415)||(30998766-30998870)
chr2 (311-412)||(35031696-35031798)
chr2 (294-415)||(16593766-16593890)
chr2 (295-418)||(21843015-21843139)
chr2 (319-415)||(15829136-15829229)
chr2 (273-389)||(19949597-19949714)
chr2 (280-392)||(1733063-1733175)
chr2 (295-414)||(21844646-21844766)
chr2 (337-415)||(24047402-24047481)
chr2 (329-415)||(27917999-27918086)
chr2 (332-416)||(17152168-17152253)
chr2 (339-415)||(34063861-34063938)
chr2 (279-396)||(32619604-32619717)
chr2 (345-416)||(39730475-39730547)
chr2 (329-415)||(19541049-19541136)
chr2 (328-415)||(18236318-18236406)
[»] chr6 (10 HSPs)
chr6 (282-417)||(13759465-13759602)
chr6 (279-414)||(16527858-16527988)
chr6 (279-414)||(30355288-30355423)
chr6 (280-418)||(16387259-16387400)
chr6 (294-415)||(15574902-15575023)
chr6 (324-415)||(17860464-17860556)
chr6 (278-413)||(26512795-26512931)
chr6 (278-413)||(26517911-26518047)
chr6 (279-340)||(15576254-15576315)
chr6 (279-414)||(20495811-20495946)
[»] chr4 (24 HSPs)
chr4 (280-415)||(34864309-34864443)
chr4 (273-409)||(5906742-5906879)
chr4 (284-415)||(25315247-25315379)
chr4 (252-396)||(12111367-12111510)
chr4 (282-396)||(18897956-18898070)
chr4 (291-415)||(1676311-1676436)
chr4 (291-415)||(1682839-1682964)
chr4 (248-414)||(27302709-27302876)
chr4 (250-392)||(9783023-9783165)
chr4 (251-396)||(15192137-15192282)
chr4 (285-376)||(4953650-4953741)
chr4 (278-415)||(46647157-46647295)
chr4 (251-415)||(10320235-10320400)
chr4 (279-356)||(25050141-25050218)
chr4 (322-414)||(47024773-47024866)
chr4 (279-414)||(22119608-22119744)
chr4 (345-416)||(13275759-13275831)
chr4 (279-414)||(24925767-24925903)
chr4 (345-415)||(1695863-1695934)
chr4 (286-349)||(1696652-1696715)
chr4 (369-415)||(17026712-17026759)
chr4 (335-396)||(10576471-10576532)
chr4 (332-415)||(19601813-19601897)
chr4 (332-392)||(21077248-21077308)
[»] scaffold0171 (2 HSPs)
scaffold0171 (249-396)||(6128-6275)
scaffold0171 (273-414)||(21353-21495)
[»] scaffold0386 (2 HSPs)
scaffold0386 (280-415)||(13087-13223)
scaffold0386 (284-415)||(8725-8857)
[»] scaffold1149 (1 HSPs)
scaffold1149 (328-414)||(1796-1882)
[»] scaffold0043 (1 HSPs)
scaffold0043 (332-416)||(58760-58845)
[»] scaffold0188 (1 HSPs)
scaffold0188 (279-414)||(26972-27107)
[»] scaffold0002 (1 HSPs)
scaffold0002 (249-370)||(446937-447058)


Alignment Details
Target: chr3 (Bit Score: 353; Significance: 0; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 11 - 419
Target Start/End: Complemental strand, 33914983 - 33914575
Alignment:
Q  11 cataggcaacacaatcgtcattaaaggcaacatagtcattacgtttcaacatattgggaggtggtttaatccacctgactatagaagcatactctgctat 110  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||    
T  33914983 cataggcaacacaatcgtcattaaaggcaacatagtcattacatttcaacatattgggaggtagtttaatccacctgactatagaaacgtactctgctat 33914884  T
Q  111 agattatggagttacaaacatgttattggttgattgcaatacagaaggaagacaaaagcacatgttaattgacgtagtttcttttacggtttcatcccct 210  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  33914883 agattatggagttacaaacatgtcattggttgattgcaatgcagaaggaagacaaaagcacatggtaattgacgtagtttcttttacagtttcatcccct 33914784  T
Q  211 taatgtagcttcataccgtactaacgactctatggtagtgatgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaa 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  33914783 taatgtagcttcataccgtactaacgactctatggtagtgatgacagagcatcacatgccactttttactatgtttttagtacttttctttgcatttcaa 33914684  T
Q  311 aacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcactttatcctaaatcatgc 410  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||    
T  33914683 gacaaataagatgagagttataggagttgtcaacggtttgaggaacatattgtattgtttttactcgagtcgttgtaattcacgttatcccaaatcatgc 33914584  T
Q  411 aactctatg 419  Q
    |||||||||    
T  33914583 aactctatg 33914575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 249 - 415
Target Start/End: Complemental strand, 1475463 - 1475296
Alignment:
Q  249 tgatgacagagcatcacatgccactttttactatgtttttaatactttt-ctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggt 347  Q
    |||||||| ||||||| ||| || ||||  ||||||||||| ||||||| ||||| |||| ||  | |||||||||||||||| ||||||| |||| |||    
T  1475463 tgatgacatagcatcatatgaca-ttttggctatgtttttagtactttttctttgcatttgaagtctaataagatgagagttagaggagttttcaatggt 1475365  T
Q  348 ttgaggaacatatcgtattgtttttactcgagtcgttgtaattcactt-tatcctaaatcatgcaactc 415  Q
    |||||||| |||| ||||| |||| |||||||||||||||||||| || ||||||| ||||||||||||    
T  1475364 ttgaggaatatattgtattattttcactcgagtcgttgtaattcaattatatcctagatcatgcaactc 1475296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 248 - 414
Target Start/End: Original strand, 13911196 - 13911363
Alignment:
Q  248 gtgatgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggt 347  Q
    |||||||| ||| |||| |||  | ||||| ||||||||||| || |||||||||||||| || |||| ||||  ||||| || | |||||||||| |||    
T  13911196 gtgatgacggagaatcaaatgatatttttttctatgtttttagtaattttctttgtatttgaagacaagtaagtagagagatagaagagttgtcaatggt 13911295  T
Q  348 ttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaact 414  Q
    ||||||||||||| |||||||||| ||| || || ||||||||||| ||||||||| |||||||||||    
T  13911296 ttgaggaacatatggtattgttttcacttgaatcattgtaattcacttttatcctagatcatgcaact 13911363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 280 - 415
Target Start/End: Complemental strand, 25919616 - 25919478
Alignment:
Q  280 tatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaac--atatcgtattgtttttactcg 377  Q
    |||||||||| ||| |||||||| |||| || ||||||||||||||||||| | || ||||||| ||||||||||||  |||| || ||||||||||| |    
T  25919616 tatgtttttagtacatttctttgaatttgaagacaaataagatgagagttagatgatttgtcaatggtttgaggaacatatattgtgttgtttttacttg 25919517  T
Q  378 agtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    |||| | ||||||||| ||||||||||||||||||||||    
T  25919516 agtcatcgtaattcacttttatcctaaatcatgcaactc 25919478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 249 - 413
Target Start/End: Complemental strand, 19219394 - 19219229
Alignment:
Q  249 tgatgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtt 348  Q
    |||||||  ||||||| |||  ||||||  || |||||||| || |||||||||  ||| || | |||||||||||||||||| ||||||||||| ||||    
T  19219394 tgatgacgaagcatcatatgatacttttagctgtgtttttagtatttttctttgcttttgaagataaataagatgagagttattggagttgtcaatggtt 19219295  T
Q  349 tgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaac 413  Q
    |||||| |||||  ||||  ||| ||| ||||||||||||||||| ||||||| ||||||||||||    
T  19219294 tgaggagcatattttattactttcactagagtcgttgtaattcacttttatccaaaatcatgcaac 19219229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 417
Target Start/End: Original strand, 21017840 - 21017978
Alignment:
Q  280 tatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgag 379  Q
    |||||||||| || ||||||||| |||| || | ||||||||||||||||| |||||||| |||   ||||||||||||||  |||| |||| |  ||||    
T  21017840 tatgtttttagtatttttctttgcatttgaagaaaaataagatgagagttagaggagttggcaataatttgaggaacatattatattattttcaaccgag 21017939  T
Q  380 tcgttgtaattca-ctttatcctaaatcatgcaactcta 417  Q
    |||||||||||||  ||||||||| ||||||||||||||    
T  21017940 tcgttgtaattcagttttatcctagatcatgcaactcta 21017978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 248 - 415
Target Start/End: Complemental strand, 8402734 - 8402566
Alignment:
Q  248 gtgatgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggt 347  Q
    ||||||||||||||||| |||  | |||  ||||||||||||    ||| ||||| |||| ||  |||||||||||  | ||| |||||||||||| |||    
T  8402734 gtgatgacagagcatcatatgatattttagactatgtttttatgtatttactttgcatttgaaggcaaataagatgtaatttagaggagttgtcaatggt 8402635  T
Q  348 ttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaactc 415  Q
    ||||||||||  | |||||||||| | ||||||||||||||||||  |||||| |||||||||||||||    
T  8402634 ttgaggaacaatttgtattgttttcattcgagtcgttgtaattcatttttatcttaaatcatgcaactc 8402566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 284 - 415
Target Start/End: Original strand, 10341763 - 10341894
Alignment:
Q  284 tttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgt 383  Q
    |||||| ||||||||| || |||| ||| ||||||||||| || ||| |||||||||||| || |||||||||| || |||||||||| |||  ||||||    
T  10341763 tttttagtacttttctctgcatttgaaatcaaataagatgtgaattagaggagttgtcaatgg-ttgaggaacaaattgtattgttttcactaaagtcgt 10341861  T
Q  384 tgtaattcac-tttatcctaaatcatgcaactc 415  Q
    |||||||||| ||||| | ||||||||||||||    
T  10341862 tgtaattcacttttattcaaaatcatgcaactc 10341894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 273 - 408
Target Start/End: Original strand, 16970196 - 16970331
Alignment:
Q  273 tttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgttttt 372  Q
    |||| |||||||||||| | ||||||||||||||| || ||||||||| ||||||||||| |||||||| | |||| |||||||| |  |||||| |||     
T  16970196 ttttgactatgtttttagtgcttttctttgtatttgaacacaaataagttgagagttatatgagttgtcgatggttcgaggaacaaacagtattg-tttc 16970294  T
Q  373 actcgagtcgttgtaattcac-tttatcctaaatcat 408  Q
    | |  |||||||||||||||| |||||||||||||||    
T  16970295 atttaagtcgttgtaattcacgtttatcctaaatcat 16970331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 317 - 414
Target Start/End: Complemental strand, 2729733 - 2729635
Alignment:
Q  317 taagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaact 414  Q
    |||||||||| |||||||||||||||| ||||  ||||||||||  ||||||||| ||||||||| ||||||||||  ||||||||||| |||||||||    
T  2729733 taagatgagaattataggagttgtcaatggttcaaggaacatattatattgttttcactcgagtccttgtaattcatttttatcctaaaccatgcaact 2729635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 392
Target Start/End: Original strand, 12409399 - 12409533
Alignment:
Q  257 gagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaac 356  Q
    |||||||||||| || |||| ||||| |||||| ||||||| ||||||||| || | ||||||  || ||| || | |||||||||| ||||||| ||||    
T  12409399 gagcatcacatgaca-ttttgactatatttttagtacttttatttgtatttgaagaaaaataacttgggagataaaagagttgtcaatggtttgaagaac 12409497  T
Q  357 atatcgtattgtttttactcgagtcgttgtaattca 392  Q
    |||| ||||| |||| ||| ||||||||||||||||    
T  12409498 atattgtattattttcacttgagtcgttgtaattca 12409533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 411
Target Start/End: Original strand, 12573252 - 12573385
Alignment:
Q  280 tatgtttttaatactttt-ctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    |||||||||| ||||||| ||||| |||  || ||||||||||||||||||| | || ||||||| |||||||||||    | |||||||||| ||||||    
T  12573252 tatgtttttagtactttttctttgcattagaagacaaataagatgagagttagatgatttgtcaatggtttgaggaatgctttgtattgttttcactcga 12573351  T
Q  379 gtcgttgtaattca-ctttatcctaaatcatgca 411  Q
    | ||||||||||||  ||||||||| ||||||||    
T  12573352 gacgttgtaattcatttttatcctagatcatgca 12573385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 280 - 411
Target Start/End: Original strand, 13549716 - 13549849
Alignment:
Q  280 tatgtttttaatactttt-ctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    |||||||||| ||||||| ||||| |||  || ||||||||||||||||||| | || ||||||| |||||||||||    | |||||||||| ||||||    
T  13549716 tatgtttttagtactttttctttgcattagaagacaaataagatgagagttagatgatttgtcaatggtttgaggaatgctttgtattgttttcactcga 13549815  T
Q  379 gtcgttgtaattca-ctttatcctaaatcatgca 411  Q
    | ||||||||||||  ||||||||| ||||||||    
T  13549816 gacgttgtaattcatttttatcctagatcatgca 13549849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 248 - 412
Target Start/End: Original strand, 11521071 - 11521235
Alignment:
Q  248 gtgatgacagagcatcacatgccactttttactatgtttttaatactttt-ctttgtatttcaaaacaaataagatgagagttataggagttgtcaacgg 346  Q
    ||||||||||||||||| ||  || ||||  ||||  ||||||||||||| | ||| |||| || | |||||||||||| |||  |||||||||||| ||    
T  11521071 gtgatgacagagcatcatattaca-ttttggctataattttaatactttttcattgcatttgaagaaaaataagatgagcgttggaggagttgtcaatgg 11521169  T
Q  347 tttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaa 412  Q
    |||||||||||||| ||||| |||||||| || | | |||||||||  ||||||||| |||||||||    
T  11521170 tttgaggaacatattgtattatttttacttgatttg-tgtaattcagttttatcctagatcatgcaa 11521235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 326 - 407
Target Start/End: Complemental strand, 19264004 - 19263922
Alignment:
Q  326 agttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatca 407  Q
    ||||| |||||||||||| |||||||||| |||||  ||||||| | ||| ||||||||||||||||| ||||||||||||||    
T  19264004 agttagaggagttgtcaatggtttgaggatcatattatattgttgtcactagagtcgttgtaattcacttttatcctaaatca 19263922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 414
Target Start/End: Original strand, 25883100 - 25883201
Alignment:
Q  314 aaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaa 412  Q
    ||||||||||||||| | | ||||||||||   ||||||||||||||  ||||||||| |||||| |||||||||||||  ||||||||| || ||||||    
T  25883100 aaataagatgagagtcagaagagttgtcaattttttgaggaacatattatattgttttcactcgaatcgttgtaattcagttttatcctagattatgcaa 25883199  T
Q  413 ct 414  Q
    ||    
T  25883200 ct 25883201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 414
Target Start/End: Complemental strand, 21829232 - 21829149
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaact 414  Q
    |||||||||||| |||||||||||||| | ||||| |||| | | ||||||||||||||||  ||||||||||||||| |||||    
T  21829232 aggagttgtcaatggtttgaggaacattttgtattattttcatttgagtcgttgtaattcagttttatcctaaatcatacaact 21829149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 333 - 408
Target Start/End: Original strand, 18065832 - 18065905
Alignment:
Q  333 ggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcat 408  Q
    ||||||||||| |||||||| ||||||| |||||||||| |||||||||   ||||||||| |||||||||||||||    
T  18065832 ggagttgtcaatggtttgagaaacatattgtattgttttcactcgagtc---gtaattcacttttatcctaaatcat 18065905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 326 - 414
Target Start/End: Original strand, 26297758 - 26297847
Alignment:
Q  326 agttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattc-actttatcctaaatcatgcaact 414  Q
    ||||| ||||||||| || |||||||| ||| | |  ||||||||| | ||||||||||||||||| | |||||||||||||||||||||    
T  26297758 agttagaggagttgttaatggtttgagaaactttttatattgttttcattcgagtcgttgtaattcaattttatcctaaatcatgcaact 26297847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 414
Target Start/End: Original strand, 27415194 - 27415266
Alignment:
Q  340 tcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaact 414  Q
    |||||||||| |||||||||| |||||||||| |||||||||   ||||||||| |||||| ||||||||||||||    
T  27415194 tcaacggtttaaggaacatattgtattgttttcactcgagtc---gtaattcacttttatcgtaaatcatgcaact 27415266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 325 - 415
Target Start/End: Complemental strand, 23007172 - 23007081
Alignment:
Q  325 gagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcacttt-atcctaaatcatgcaactc 415  Q
    |||||| | |||||||||| | ||||||||| |||| ||||||||||  |||||||| || ||| ||||||| |||||||||||| ||||||    
T  23007172 gagttagatgagttgtcaatgatttgaggaatatattgtattgttttccctcgagtcattataaatcacttttatcctaaatcatacaactc 23007081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 414
Target Start/End: Complemental strand, 4775794 - 4775724
Alignment:
Q  345 ggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcact-ttatcctaaatcatgcaact 414  Q
    |||||| |||||||||  ||||||||| ||  |||||||||||||||||| |||||||| |||||||||||    
T  4775794 ggtttgtggaacatattttattgttttcacctgagtcgttgtaattcactcttatcctagatcatgcaact 4775724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 409
Target Start/End: Complemental strand, 19546075 - 19546005
Alignment:
Q  340 tcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcact-ttatcctaaatcatg 409  Q
    |||| |||||||||||| ||| |||||||||||| | ||||| |||||||||||| |||||||| ||||||    
T  19546075 tcaatggtttgaggaacttattgtattgtttttatttgagtcattgtaattcactattatcctatatcatg 19546005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 414
Target Start/End: Complemental strand, 4780824 - 4780704
Alignment:
Q  294 ttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac 393  Q
    |||||||||||||| || |||||| |||| |||  || ||||| | | || |||||||||| ||||| |||||||||| ||| || || |||||||||||    
T  4780824 ttttctttgtatttgaatacaaatgagataagatatagaggagctcttaatggtttgagga-catattgtattgttttcacttgaatcattgtaattcac 4780726  T
Q  394 t-ttatcctaaatcatgcaact 414  Q
    | |||||||| ||||| |||||    
T  4780725 tcttatcctacatcattcaact 4780704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 414
Target Start/End: Original strand, 11474868 - 11474944
Alignment:
Q  339 gtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattc-actttatcctaaatcatgcaact 414  Q
    ||||| |||||||||||| | | ||||| |||| | |||| |||||||||||| | |||||||||||||||||||||    
T  11474868 gtcaatggtttgaggaactttttgtattattttcattcgactcgttgtaattcaattttatcctaaatcatgcaact 11474944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 340
Target Start/End: Original strand, 17637035 - 17637126
Alignment:
Q  249 tgatgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgt 340  Q
    ||||||| |||||||| ||| || ||||  |||||||| || |||||||||||||| || || ||||||||||| ||| | | |||||||||    
T  17637035 tgatgacggagcatcatatgacatttttggctatgtttatattacttttctttgtaattaaagacaaataagataagaataagaggagttgt 17637126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 413
Target Start/End: Original strand, 33577754 - 33577831
Alignment:
Q  337 ttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcactt-tatcctaaatcatgcaac 413  Q
    ||||||| ||||||| |||| | | |||||||||||| | || || |||||||||| || ||||||||||||||||||    
T  33577754 ttgtcaatggtttgaagaacgttttgtattgtttttatttgattcattgtaattcatttatatcctaaatcatgcaac 33577831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 10303427 - 10303495
Alignment:
Q  284 tttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgag 352  Q
    |||||| ||||||||| |  |||| ||| ||||||||||| || ||| |||||||||||| ||||||||    
T  10303427 tttttagtacttttctctacatttgaaatcaaataagatgtgaattagaggagttgtcaatggtttgag 10303495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 9e-43; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 273 - 415
Target Start/End: Complemental strand, 14977266 - 14977122
Alignment:
Q  273 tttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgttttt 372  Q
    |||| ||||||||||||  ||||||||||| |||| || ||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||    
T  14977266 ttttaactatgtttttagcacttttctttgcattttaagacaaataagatgagagttagaggagttgtcaatggtttgaggaacatattgtattgttttt 14977167  T
Q  373 -actcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
     ||||||||| ||||||||||| ||||||||||||||||||||||    
T  14977166 cactcgagtcattgtaattcacttttatcctaaatcatgcaactc 14977122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 279 - 418
Target Start/End: Original strand, 12956451 - 12956591
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    ||||||||||| |||||||||||| |||| || | ||||||||||||||||| |||||||||||| ||||||||||| |||| |||||||||| ||||||    
T  12956451 ctatgtttttagtacttttctttgcatttgaagataaataagatgagagttagaggagttgtcaatggtttgaggaaaatattgtattgttttcactcga 12956550  T
Q  379 gtcgttgtaattcac-tttatcctaaatcatgcaactctat 418  Q
    ||| | ||||||||| |||||||||||||||| ||||||||    
T  12956551 gtcatcgtaattcacttttatcctaaatcatgtaactctat 12956591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 279 - 415
Target Start/End: Complemental strand, 28901493 - 28901356
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    ||||| |||||||||||||||||| |||| || ||||||||| |||||| || |||||||||||| |||||||||||||||| |||||||||| ||||||    
T  28901493 ctatgcttttaatacttttctttgcatttgaatacaaataagttgagagatagaggagttgtcaatggtttgaggaacatattgtattgttttcactcga 28901394  T
Q  379 gtcgttgtaattc-actttatcctaaatcatgcaactc 415  Q
    |||||||||||||   ||||||||| || |||||||||    
T  28901393 gtcgttgtaattcgtttttatcctagataatgcaactc 28901356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 273 - 415
Target Start/End: Original strand, 24120187 - 24120331
Alignment:
Q  273 tttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgttttt 372  Q
    ||||| ||||||||||| |||||||||||| |||| || | ||||||||||||||||| |||||||||||||||||||||||| |||| ||||| |||||    
T  24120187 tttttgctatgtttttagtacttttctttgcatttgaagagaaataagatgagagttagaggagttgtcaacggtttgaggaatatattgtatttttttt 24120286  T
Q  373 -actcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
     || | | |||||||| || || |||||||||||| |||||||||    
T  24120287 cacccaattcgttgtagttaacttttatcctaaataatgcaactc 24120331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 248 - 415
Target Start/End: Complemental strand, 16052461 - 16052293
Alignment:
Q  248 gtgatgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggt 347  Q
    |||||||| |||||||| |||  | ||||  ||||||||||| ||||||| |||| |||| |  |||||||| |||||||||| |||||||||||| |||    
T  16052461 gtgatgacggagcatcatatgatatttttggctatgtttttagtacttttatttgcatttgaggacaaataaaatgagagttagaggagttgtcaatggt 16052362  T
Q  348 ttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    ||||  |||||||  || |||||| |||||||||||| |||||||| |||| | |||||||||||||||    
T  16052361 ttgaataacatattttaatgttttcactcgagtcgttataattcacatttaccttaaatcatgcaactc 16052293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 247 - 408
Target Start/End: Original strand, 16054224 - 16054386
Alignment:
Q  247 agtgatgacagagcatcacatgccactttttactatgtttttaatactttt-ctttgtatttcaaaacaaataagatgagagttataggagttgtcaacg 345  Q
    |||||||||||||||||| ||| || ||||  |||||| |||| ||||||| ||||| |||| || ||||||||||| ||||||| |||||||||||| |    
T  16054224 agtgatgacagagcatcatatgaca-ttttggctatgtctttagtactttttctttgcatttgaagacaaataagataagagttagaggagttgtcaatg 16054322  T
Q  346 gtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcat 408  Q
     ||| |||||||| | |||||||||| |||||||| |||||||||||  ||||||||| |||||    
T  16054323 atttaaggaacattttgtattgttttcactcgagttgttgtaattcatttttatcctagatcat 16054386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 279 - 415
Target Start/End: Original strand, 32239249 - 32239386
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    |||||||||||  ||||||||||  |||| || | | ||||||| | | ||| |||||||||||| |||||||| ||||||| |||||||||||||| ||    
T  32239249 ctatgtttttagcacttttctttacatttgaagatagataagataataattagaggagttgtcaatggtttgagtaacatattgtattgtttttacttga 32239348  T
Q  379 gtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    ||||||| ||||||| |||||| |||||||||||||||    
T  32239349 gtcgttgcaattcacttttatcttaaatcatgcaactc 32239386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 280 - 414
Target Start/End: Complemental strand, 13082090 - 13081954
Alignment:
Q  280 tatgtttttaatactttt-ctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    |||||||||| ||||||| ||||| |||| || ||||||||||||||||||| |||||||||||| | |||||| ||||  | ||| |||||| ||||||    
T  13082090 tatgtttttagtactttttctttgcatttgaagacaaataagatgagagttagaggagttgtcaatgatttgagaaacacgttgtagtgttttcactcga 13081991  T
Q  379 gtcgttgtaattcactt-tatcctaaatcatgcaact 414  Q
    || ||||||||||| || ||||||| |||||||||||    
T  13081990 gtagttgtaattcagttgtatcctagatcatgcaact 13081954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 314 - 414
Target Start/End: Complemental strand, 5570259 - 5570158
Alignment:
Q  314 aaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaa 412  Q
    ||||||||||||| ||  ||||||||||||   |||||||||||||| |||||||||| |||||||| |||||||||||| ||||||||| |||||||||    
T  5570259 aaataagatgagatttgaaggagttgtcaatactttgaggaacatattgtattgttttcactcgagttgttgtaattcacttttatcctatatcatgcaa 5570160  T
Q  413 ct 414  Q
    ||    
T  5570159 ct 5570158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 294 - 392
Target Start/End: Complemental strand, 29047454 - 29047359
Alignment:
Q  294 ttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca 392  Q
    ||||||||| |||| |||||||||||||||||||||| |||||||||||| |||   ||||||| || |||||||||| |||||||||  |||||||||    
T  29047454 ttttctttgcatttgaaaacaaataagatgagagttagaggagttgtcaatggt---aggaacacattgtattgttttcactcgagtcactgtaattca 29047359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 415
Target Start/End: Complemental strand, 35135522 - 35135438
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaactc 415  Q
    |||||||||||| ||||| ||| |||| | |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  35135522 aggagttgtcaaaggttttaggtacattttgtattgtttttactcgagtcattgtaattcatttttatcctaaatcatgcaactc 35135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 28902056 - 28902168
Alignment:
Q  284 tttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgt 383  Q
    |||||| ||||||| |||| ||||  |  ||| |||||||| || || ||||||| | || |||||||| ||||||| |||||||||| | |||||||||    
T  28902056 tttttagtacttttatttgcatttataggcaagtaagatgatagatagaggagttattaatggtttgagaaacatattgtattgttttcattcgagtcgt 28902155  T
Q  384 tgtaattcacttt 396  Q
    |||||||||||||    
T  28902156 tgtaattcacttt 28902168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 386
Target Start/End: Original strand, 6358660 - 6358767
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    ||||||||||| ||||||| |||| |||| || ||| ||||| |||||| || ||||||||| || |||||| | ||||||| |||||||||| | ||||    
T  6358660 ctatgtttttagtacttttatttgcatttgaagacatataagttgagagatagaggagttgttaatggtttgggaaacatattgtattgttttcaatcga 6358759  T
Q  379 gtcgttgt 386  Q
    | ||||||    
T  6358760 gccgttgt 6358767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 418
Target Start/End: Complemental strand, 24584824 - 24584737
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaactctat 418  Q
    ||||||||||| ||||||||||||  | | |||||||||| | ||||||| ||||||||||  |||||| ||||||||||||||||||    
T  24584824 aggagttgtcatcggtttgaggaattttttgtattgttttcattcgagtcattgtaattcatttttatcataaatcatgcaactctat 24584737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 412
Target Start/End: Complemental strand, 11310387 - 11310223
Alignment:
Q  249 tgatgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtt 348  Q
    |||| ||||||||||| |||  | ||||| ||||||||||| ||||| |||||| |||| || | ||||||| |||||| || |  | ||||||| ||||    
T  11310387 tgataacagagcatcatatgatattttttgctatgtttttagtacttatctttgcatttgaagaaaaataagttgagagatagaaaaattgtcaatggtt 11310288  T
Q  349 tgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaa 412  Q
    | || |||||||  | ||||||| |||| ||| ||| |||||||  ||||||||| |||||||||    
T  11310287 taagaaacatatttttttgttttcactcaagttgttataattcatttttatcctagatcatgcaa 11310223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 414
Target Start/End: Complemental strand, 27097901 - 27097818
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaact 414  Q
    |||| ||||||| |||||||||||||| | | |||||||| | | ||||||||||||||||  |||||| ||||||||||||||    
T  27097901 aggaattgtcaatggtttgaggaacatgttgcattgttttcatttgagtcgttgtaattcagttttatcataaatcatgcaact 27097818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 343
Target Start/End: Complemental strand, 28252533 - 28252470
Alignment:
Q  280 tatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaa 343  Q
    |||||||||||||||||| || |||||| || ||||||||||||||||||| | ||| ||||||    
T  28252533 tatgtttttaatacttttattcgtatttaaagacaaataagatgagagttagaagagatgtcaa 28252470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 335 - 415
Target Start/End: Original strand, 10867006 - 10867087
Alignment:
Q  335 agttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaactc 415  Q
    ||||||||| ||||||||||| || | |||||||||| | | ||||||||||||||||  ||||||  ||||||||||||||    
T  10867006 agttgtcaatggtttgaggaatattttgtattgttttcatttgagtcgttgtaattcagttttatctcaaatcatgcaactc 10867087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 415
Target Start/End: Complemental strand, 14424905 - 14424828
Alignment:
Q  339 gtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcacttt-atcctaaatcatgcaactc 415  Q
    ||||| |||||||||||| | |  ||| ||||| | |||||||||||||||||| ||| |||||||||||||||||||    
T  14424905 gtcaatggtttgaggaactttttatatggttttcattcgagtcgttgtaattcagttttatcctaaatcatgcaactc 14424828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 246 - 414
Target Start/End: Complemental strand, 11770180 - 11770011
Alignment:
Q  246 tagtgatgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacg 345  Q
    ||||||||| |||||||||||||  | ||||  |||||||||||||||| ||||||| |||| || | ||||||||||||||||| || | ||||||| |    
T  11770180 tagtgatgatagagcatcacatgatatttttgtctatgtttttaatactattctttgcatttgaagataaataagatgagagttagagaatttgtcaatg 11770081  T
Q  346 gtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaact 414  Q
    |||| |||||||||| |||||||||| ||||| ||||||||||||||| |||||||||||||||| ||||    
T  11770080 gtttaaggaacatattgtattgttttcactcgtgtcgttgtaattcacttttatcctaaatcatgaaact 11770011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 248 - 415
Target Start/End: Original strand, 30675414 - 30675583
Alignment:
Q  248 gtgatgacagagcatcacatgccactttttactatgtttttaatacttttctttgt-atttcaaaacaaataagatgagagttataggagttgtcaacgg 346  Q
    ||||||||||||||||| ||| || ||||| |||||||||||  |||||||||| | ||||  | ||||||||||||| | ||| |||||||||||| ||    
T  30675414 gtgatgacagagcatcatatgacattttttgctatgtttttagaacttttctttttcatttgtagacaaataagatgaaaattagaggagttgtcaatgg 30675513  T
Q  347 tttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    |||||||||||||| |||||||||| ||||||||||||||||| ||| ||| ||||| ||||||||||||    
T  30675514 tttgaggaacatattgtattgttttcactcgagtcgttgtaatacacttttgtcctatatcatgcaactc 30675583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 273 - 412
Target Start/End: Original strand, 12810278 - 12810418
Alignment:
Q  273 tttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgttttt 372  Q
    ||||||||||||||||| ||||||||||| ||||| || ||||||||| |||||| || |||||||||||| |||||||||||||||| ||||||||||     
T  12810278 tttttactatgtttttagtacttttctttatatttaaagacaaataagttgagagatagaggagttgtcaatggtttgaggaacatattgtattgttttc 12810377  T
Q  373 actcgagtcgttgtaattca-ctttatcctaaatcatgcaa 412  Q
    | || |||||||||||||||  ||||||||| |||||||||    
T  12810378 attcaagtcgttgtaattcatttttatcctagatcatgcaa 12810418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 273 - 415
Target Start/End: Original strand, 26657432 - 26657575
Alignment:
Q  273 tttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgttttt 372  Q
    |||| |||||||||||| |||||||||||| |||| || ||||||| | |||||| || |||||||||||| ||||||||||| |||  ||||||||||     
T  26657432 ttttgactatgtttttattacttttctttgcatttgaagacaaatatgttgagagatagaggagttgtcaatggtttgaggaatataatgtattgttttc 26657531  T
Q  373 actcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    |||||| |||||||||||||| ||||||||| |||| |||||||    
T  26657532 actcgattcgttgtaattcacttttatcctagatcacgcaactc 26657575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 279 - 415
Target Start/End: Original strand, 50047143 - 50047280
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    |||||||||| ||||||||||||| |||| || ||||||||||||| |  || |||||||||||| | |||||| ||||||| |||||||||| ||||||    
T  50047143 ctatgtttttgatacttttctttgcatttgaagacaaataagatgaaaagtagaggagttgtcaatgatttgagaaacatattgtattgttttcactcga 50047242  T
Q  379 gtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    ||| | ||||||||| ||||||||||||||| ||||||    
T  50047243 gtcatggtaattcacttttatcctaaatcatacaactc 50047280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 249 - 390
Target Start/End: Complemental strand, 8247840 - 8247699
Alignment:
Q  249 tgatgacagagcatcacatgccactttttactatgtttttaatac-ttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggt 347  Q
    |||||||||||||||| ||| || |||| |||||||||||||||| ||||||||| |||| || ||||||||||||||||||| ||||| | |||| |||    
T  8247840 tgatgacagagcatcatatgaca-ttttgactatgtttttaataccttttctttgcatttgaagacaaataagatgagagttagaggagatatcaatggt 8247742  T
Q  348 ttgaggaacatatcgtattgtttttactcgagtcgttgtaatt 390  Q
    |||||||||||||  |||| |||| ||| ||||| ||||||||    
T  8247741 ttgaggaacatattttattattttcacttgagtcattgtaatt 8247699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 279 - 415
Target Start/End: Original strand, 23223373 - 23223511
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgttttt-actcg 377  Q
    ||||||||| | |||||||||||| ||||  | |||| ||||||| |||||| |||||||||||| ||||||||||||| || ||||| ||||| |||||    
T  23223373 ctatgttttaagtacttttctttgcattttgagacaattaagatgggagttagaggagttgtcaatggtttgaggaacacattgtattttttttcactcg 23223472  T
Q  378 agtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    | ||||||||||| || ||||||||||||||||||||||    
T  23223473 attcgttgtaatttacttttatcctaaatcatgcaactc 23223511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 249 - 415
Target Start/End: Complemental strand, 12424097 - 12423930
Alignment:
Q  249 tgatgacagagcatcacatgccactttttactatgtttttaatactttt-ctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggt 347  Q
    |||||||||||||||| |||  | ||||  ||||||||||| ||||||| ||||| |||| || ||||||||||||||||  | ||| ||||| || |||    
T  12424097 tgatgacagagcatcatatgata-ttttggctatgtttttagtactttttctttgcatttgaagacaaataagatgagagacagaggcgttgttaatggt 12423999  T
Q  348 ttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaactc 415  Q
    |||||||||||||  ||||||||| ||||||||| ||||||||||  |||||| || ||||||||||||    
T  12423998 ttgaggaacatatgatattgttttcactcgagtcattgtaattcagttttatcttagatcatgcaactc 12423930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 249 - 414
Target Start/End: Complemental strand, 25730754 - 25730588
Alignment:
Q  249 tgatgacagagcatcacatgccacttttta-ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggt 347  Q
    |||||||||||||||| |||  | |||||  ||||||||| | |||||||||||| |||| |||||||||||||||||||||| ||| | |||||| ||     
T  25730754 tgatgacagagcatcatatgatatttttttgctatgtttt-agtacttttctttgcatttgaaaacaaataagatgagagttagagggggtgtcaatggc 25730656  T
Q  348 ttgaggaacatatcgtattgtttttactcgagtcgttgtaattc-actttatcctaaatcatgcaact 414  Q
    ||||||| | ||| |||||||||| | || | || ||| ||||| | |||||||||||||||||||||    
T  25730655 ttgaggagcgtattgtattgttttcattcaaatcattgaaattcaattttatcctaaatcatgcaact 25730588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 313 - 414
Target Start/End: Complemental strand, 25494598 - 25494496
Alignment:
Q  313 caaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgca 411  Q
    |||||| ||||| ||||| |||||||||||| |||||||||||||||| || |||||||  || ||||| |||||||| || ||||||||||||||||||    
T  25494598 caaataggatgaaagttagaggagttgtcaatggtttgaggaacatattgtcttgttttctcttgagtccttgtaatttacttttatcctaaatcatgca 25494499  T
Q  412 act 414  Q
    |||    
T  25494498 act 25494496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 414
Target Start/End: Original strand, 34381671 - 34381806
Alignment:
Q  280 tatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgag 379  Q
    |||||||||| || |||| |||| |||| ||  |||||||||||  | ||| ||||||||| || ||||||| ||||||||  ||||||||| | |||||    
T  34381671 tatgtttttattagttttatttgcatttgaaggcaaataagatgtaatttagaggagttgttaatggtttgaagaacatattatattgttttcattcgag 34381770  T
Q  380 tcgttgtaattcactt-tatcctaaatcatgcaact 414  Q
    |||||||||||||||| ||| |||||||| ||||||    
T  34381771 tcgttgtaattcacttctattctaaatcacgcaact 34381806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 249 - 418
Target Start/End: Complemental strand, 23519939 - 23519771
Alignment:
Q  249 tgatgacagagcatcacatgccactttttactatgttttt--aatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacgg 346  Q
    |||||||| ||||||| ||| | ||||| |||||||||||  | ||||||||||||  ||| || ||||||| |||||||| || |  |||||| ||  |    
T  23519939 tgatgacaaagcatcatatgac-cttttgactatgtttttttagtacttttctttgcttttgaagacaaatatgatgagagatagaaaagttgttaatag 23519841  T
Q  347 tttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactctat 418  Q
    |||||||||||||| |||   |||| |||| |||| ||||||||||| ||||||||| |||||||||||||||    
T  23519840 tttgaggaacatattgta---ttttcactcaagtcattgtaattcacttttatcctagatcatgcaactctat 23519771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 391
Target Start/End: Complemental strand, 21451999 - 21451857
Alignment:
Q  248 gtgatgacagagcatcacatgccactttttactatgtttttaatac-ttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacgg 346  Q
    ||||||||| ||||||| ||| || ||||  ||||||||||| ||| ||||||||| |||| || |||||||||||||||| || | |||||||||| ||    
T  21451999 gtgatgacatagcatcatatgaca-ttttggctatgtttttagtacgttttctttgcatttgaagacaaataagatgagagatagaagagttgtcaatgg 21451901  T
Q  347 tttgaggaacatatcgtattgtttttactcgagtcgttgtaattc 391  Q
    | | |||||||||| ||||| |||| |||||| || || ||||||    
T  21451900 tat-aggaacatattgtattattttcactcgactcattataattc 21451857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 280 - 392
Target Start/End: Complemental strand, 25266496 - 25266385
Alignment:
Q  280 tatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgag 379  Q
    |||||||||| |||||||||||| |||| || ||| | ||||| |||| || || ||||||||| ||| |||  ||||||| |||||||||| |||||||    
T  25266496 tatgtttttagtacttttctttgcatttgaagacaga-aagataagagatagagaagttgtcaatggtatgaaaaacatattgtattgttttcactcgag 25266398  T
Q  380 tcgttgtaattca 392  Q
    || ||||||||||    
T  25266397 tcattgtaattca 25266385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 415
Target Start/End: Original strand, 26102080 - 26102156
Alignment:
Q  340 tcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    |||| |||||||||| ||| | |||||||||| | |||||| |||||||||||| ||||||||||||||||||||||    
T  26102080 tcaatggtttgaggaccattttgtattgttttcattcgagttgttgtaattcacttttatcctaaatcatgcaactc 26102156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 414
Target Start/End: Complemental strand, 18301158 - 18301020
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataaga--tgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactc 376  Q
    ||||||||||  |||||||||||| |||| || ||||| || |  ||||||||||||| |||||||| ||||||||||| |||| ||| ||||||   |     
T  18301158 ctatgtttttggtacttttctttgcatttgaagacaaacaaaaaatgagagttataggggttgtcaatggtttgaggaatatattgtactgttttcttta 18301059  T
Q  377 gagtcgttgtaattcac-tttatcctaaatcatgcaact 414  Q
     ||||||||||||| || ||||||  |||||||||||||    
T  18301058 aagtcgttgtaattgacttttatcgaaaatcatgcaact 18301020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 412
Target Start/End: Original strand, 18391046 - 18391178
Alignment:
Q  281 atgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagt 380  Q
    ||||||||| |  |||||| ||||||| || ||||||||||||  | ||| || ||||||||| |||||||| ||||| |  |||| |||| | | ||||    
T  18391046 atgtttttagttattttctgtgtatttaaagacaaataagatgtcatttaaagaagttgtcaatggtttgagtaacattttatattattttcatttgagt 18391145  T
Q  381 cgttgtaattcac-tttatcctaaatcatgcaa 412  Q
    |||||||||| || ||||||||| |||||||||    
T  18391146 cgttgtaattaacttttatcctagatcatgcaa 18391178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 373
Target Start/End: Complemental strand, 24903433 - 24903354
Alignment:
Q  294 ttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgttttta 373  Q
    ||||||||| |||| || ||||||| ||||||| |||  ||||||||||| | |||||||||||||| ||||| ||||||    
T  24903433 ttttctttgcatttgaagacaaatatgatgagaattagtggagttgtcaatgatttgaggaacatattgtatttttttta 24903354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 415
Target Start/End: Complemental strand, 25727996 - 25727925
Alignment:
Q  345 ggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    ||||| |||||  ||| |||||||||| |||| | |||||||||||||| ||||||||||||||||||||||    
T  25727996 ggtttaaggaatgtattgtattgttttcactctaatcgttgtaattcacttttatcctaaatcatgcaactc 25727925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 415
Target Start/End: Complemental strand, 25736404 - 25736333
Alignment:
Q  345 ggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    ||||| |||||  ||| |||||||||| |||| | |||||||||||||| ||||||||||||||||||||||    
T  25736404 ggtttaaggaatgtattgtattgttttcactctaatcgttgtaattcacttttatcctaaatcatgcaactc 25736333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 340
Target Start/End: Original strand, 30781715 - 30781783
Alignment:
Q  273 tttttactatgtttttaatactttt-ctttgtatttcaaaacaaataagatgagagttataggagttgt 340  Q
    ||||| ||||||||||| || |||| ||||| |||| || ||||||||||||||||||| |||||||||    
T  30781715 tttttgctatgtttttagtaatttttctttgcatttgaagacaaataagatgagagttagaggagttgt 30781783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 409
Target Start/End: Original strand, 25126495 - 25126573
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatg 409  Q
    |||||||||||| |||||||| ||  | | |||||||||||| | ||||||| ||||||||  ||||||||||||||||    
T  25126495 aggagttgtcaatggtttgagaaattttttgtattgtttttatttgagtcgtggtaattcagttttatcctaaatcatg 25126573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 415
Target Start/End: Original strand, 19884190 - 19884271
Alignment:
Q  335 agttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcacttt-atcctaaatcatgcaactc 415  Q
    |||| |||| |||||||||||| | |  ||||||||| | |||| ||| |||||||| |||| |||||||||||||||||||    
T  19884190 agttatcaatggtttgaggaaccttttatattgttttcattcgattcgatgtaattctcttttatcctaaatcatgcaactc 19884271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 25777990 - 25777933
Alignment:
Q  273 tttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagtta 330  Q
    ||||| ||||||| ||| | |||||||||| |||| |||| |||||||||||||||||    
T  25777990 tttttgctatgttcttagtgcttttctttgcatttgaaaataaataagatgagagtta 25777933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 414
Target Start/End: Original strand, 31313613 - 31313650
Alignment:
Q  378 agtcgttgtaattcacttt-atcctaaatcatgcaact 414  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  31313613 agtcgttgtaattcacttttatcctaaatcatgcaact 31313650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 414
Target Start/End: Complemental strand, 27461266 - 27461198
Alignment:
Q  347 tttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaact 414  Q
    |||||||||||| | |||||||||| | || ||| ||| |||||||| |||||||||||| ||||||||    
T  27461266 tttgaggaacattttgtattgttttcattcaagttgttataattcacttttatcctaaattatgcaact 27461198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 6e-38; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 273 - 420
Target Start/End: Complemental strand, 17382194 - 17382046
Alignment:
Q  273 tttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgttttt 372  Q
    ||||| |||||| |||| ||||||| |||| |||| || ||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||     
T  17382194 tttttgctatgtgtttagtacttttttttgcatttgaagacaaataagatgagagttagaggagttgtcaatggtttgaggaacatattgtattgttttc 17382095  T
Q  373 actcgagtcgttgtaattcac-tttatcctaaatcatgcaactctatga 420  Q
    |||| | |||||||| ||||| ||||||||||||||||||||| |||||    
T  17382094 actcaaatcgttgtatttcacttttatcctaaatcatgcaactttatga 17382046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 248 - 415
Target Start/End: Original strand, 24841684 - 24841852
Alignment:
Q  248 gtgatgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggt 347  Q
    ||||||||||||||||| ||| || ||||| ||||||||||| |||| ||||||| |||| || ||||||||| | |||| || ||||||| |||| |||    
T  24841684 gtgatgacagagcatcatatgacattttttgctatgtttttagtactattctttgcatttgaagacaaataagtttagagatagaggagttttcaatggt 24841783  T
Q  348 ttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||| ||||||||| |||||| |||||    
T  24841784 ttgaggaacatattgtattgttttcactcgagtcgttgtaagtcacttttatcctagatcatggaactc 24841852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 257 - 415
Target Start/End: Original strand, 17027467 - 17027626
Alignment:
Q  257 gagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaac 356  Q
    |||||||| ||| || ||||  ||||||||||| |||||||||||| |||| || |||| |||||||||||||| ||| || ||||| ||||||||||||    
T  17027467 gagcatcatatgacatttttggctatgtttttagtacttttctttgcatttaaagacaattaagatgagagttagaggcgtggtcaagggtttgaggaac 17027566  T
Q  357 atatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    |||| | |||||||| ||| ||||||||||||||||| |||||||||||||| |||||||    
T  17027567 atattgaattgttttcacttgagtcgttgtaattcacttttatcctaaatcacgcaactc 17027626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 280 - 415
Target Start/End: Original strand, 24517317 - 24517453
Alignment:
Q  280 tatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgag 379  Q
    |||||||||| | |||| ||||| |||| || ||||||||||||||| ||| |||||||||||| |||||||||||||||| |||||||||| || ||||    
T  24517317 tatgtttttagttctttgctttgcatttgaagacaaataagatgagaattagaggagttgtcaatggtttgaggaacatattgtattgttttcacccgag 24517416  T
Q  380 tcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    |||||||||||||| |||||||| ||||||| |||||    
T  24517417 tcgttgtaattcacatttatccttaatcatgtaactc 24517453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 279 - 412
Target Start/End: Original strand, 18222455 - 18222589
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    |||| |||||| || |||| ||| ||||| || ||||||||||||||||||| | |||||||||| |||||||| ||||||| |||||||||| ||||||    
T  18222455 ctatatttttagtatttttatttctatttgaagacaaataagatgagagttagatgagttgtcaatggtttgagaaacatattgtattgttttaactcga 18222554  T
Q  379 gtcgttgtaattcac-tttatcctaaatcatgcaa 412  Q
    ||| ||||||||||| |||||||||||||||||||    
T  18222555 gtcattgtaattcacttttatcctaaatcatgcaa 18222589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 249 - 414
Target Start/End: Complemental strand, 25594875 - 25594709
Alignment:
Q  249 tgatgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtt 348  Q
    |||||||||||||||| ||   | ||||  ||||||||||| ||||||| |||| |||| || ||||||||||||||||||| |||| || |||| ||||    
T  25594875 tgatgacagagcatcatatattatttttggctatgtttttagtacttttatttgcatttgaagacaaataagatgagagttagaggatttctcaatggtt 25594776  T
Q  349 tgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaact 414  Q
    |||||||||||| |||||||||| ||| |||| |||||| ||||  |||||||||||| ||||||||    
T  25594775 tgaggaacatattgtattgttttcactggagttgttgtatttcatttttatcctaaatgatgcaact 25594709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 314 - 418
Target Start/End: Original strand, 16634043 - 16634148
Alignment:
Q  314 aaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaa 412  Q
    ||||||||||||||||  | |||||||||| |||||||| ||||||| |||||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  16634043 aaataagatgagagttggatgagttgtcaatggtttgagaaacatattgtattgttttcactcgagtcgttgtaattcacttttattctaaatcatgcaa 16634142  T
Q  413 ctctat 418  Q
    ||||||    
T  16634143 ctctat 16634148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 312 - 414
Target Start/End: Original strand, 25680591 - 25680694
Alignment:
Q  312 acaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattc-actttatcctaaatcatgc 410  Q
    ||||| |||||||||||||| ||| || |||| |||||||||||||||| |||||||||| ||||||||||||||||||| | ||||| |||||||||||    
T  25680591 acaaaaaagatgagagttattggatttttcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaattcaattttattctaaatcatgc 25680690  T
Q  411 aact 414  Q
    ||||    
T  25680691 aact 25680694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 249 - 412
Target Start/End: Original strand, 15205577 - 15205739
Alignment:
Q  249 tgatgacagagcatcacatgccactttttactatgtttttaatacttttc-tttgtatttcaaaacaaataagatgagagttataggagttgtcaacggt 347  Q
    |||||||||||||||| |||  | |||| |||||||||||| || ||||  |||| |||| || ||||||||||||||  ||| |||||||||||  |||    
T  15205577 tgatgacagagcatcatatgata-ttttgactatgtttttagtattttttatttgcatttaaatacaaataagatgag--ttaaaggagttgtcagtggt 15205673  T
Q  348 ttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaa 412  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||  ||| ||||| |||||||||    
T  15205674 ttgaggaacatattgtattgttttcactcgagtcgttgtaattcagttttctcctagatcatgcaa 15205739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 253 - 414
Target Start/End: Complemental strand, 12340191 - 12340031
Alignment:
Q  253 gacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgag 352  Q
    |||||||||||| ||| || ||||  ||||||||||| || ||||||||| |||| || ||||||||| ||||||||| |||||||||||| ||||||||    
T  12340191 gacagagcatcatatgaca-ttttggctatgtttttagta-ttttctttgcatttgaagacaaataaggtgagagttagaggagttgtcaatggtttgag 12340094  T
Q  353 gaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaact 414  Q
    ||||||||  |||| |||| ||| | ||| ||||||||||  ||||| ||| |||||||||||    
T  12340093 gaacatattatattattttcacttgtgtcattgtaattcagttttatactagatcatgcaact 12340031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 357
Target Start/End: Original strand, 30072140 - 30072218
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaaca 357  Q
    ||||||||| | |||||||||||| |||| || ||||||||||||||| ||| |||||||||||| |||||||||||||    
T  30072140 ctatgttttaagtacttttctttggatttgaagacaaataagatgagaattagaggagttgtcaatggtttgaggaaca 30072218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 412
Target Start/End: Complemental strand, 23157888 - 23157807
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaa 412  Q
    |||||||||||| |||||||||||| | | |||||||||| | | ||||||||||||||||| |||||| ||||||||||||    
T  23157888 aggagttgtcaatggtttgaggaacttttggtattgttttcatttgagtcgttgtaattcacttttatcataaatcatgcaa 23157807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 279 - 414
Target Start/End: Complemental strand, 16622819 - 16622684
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    ||||||||||| || |||| |||  |||| || ||||||| ||  ||||||| |||||||||||| |||||||||||||| | ||||||| || |||| |    
T  16622819 ctatgtttttagtattttt-tttacatttgaagacaaatacgaaaagagttaaaggagttgtcaatggtttgaggaacatgttgtattgtattcactcta 16622721  T
Q  379 gtcgttgtaattcac-tttatcctaaatcatgcaact 414  Q
     | |||||||| ||| ||||||||| |||||||||||    
T  16622720 tttgttgtaatacacttttatcctagatcatgcaact 16622684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 415
Target Start/End: Original strand, 22229741 - 22229903
Alignment:
Q  249 tgatgacagagcatcacatgccactttttactatgtttttaa-tacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggt 347  Q
    |||||||||||||||| ||| || ||||  |||||||||| | |||||||||||| |||| || |||||||||||||||| || ||     | ||| |||    
T  22229741 tgatgacagagcatcatatgtca-ttttggctatgttttttagtacttttctttgcatttgaagacaaataagatgagagatagag-----gccaatggt 22229834  T
Q  348 ttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaactc 415  Q
    || |||||  ||| |||||||||| ||| ||||||||||||||||  ||||||||| | ||||||||||    
T  22229835 ttaaggaatgtattgtattgttttcacttgagtcgttgtaattcagttttatcctagaccatgcaactc 22229903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 415
Target Start/End: Original strand, 24268574 - 24268654
Alignment:
Q  336 gttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    |||||| | |||||||||||||| | |||||||||| ||||||||| || |||||||| ||||||||| ||||||||||||    
T  24268574 gttgtcgatggtttgaggaacatcttgtattgttttcactcgagtcattataattcacttttatcctagatcatgcaactc 24268654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 415
Target Start/End: Original strand, 24345203 - 24345283
Alignment:
Q  336 gttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    |||||| | |||||||||||||| | |||||||||| ||||||||| || |||||||| ||||||||| ||||||||||||    
T  24345203 gttgtcgatggtttgaggaacatcttgtattgttttcactcgagtcattataattcacttttatcctagatcatgcaactc 24345283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 414
Target Start/End: Complemental strand, 24411029 - 24410946
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaact 414  Q
    |||||||||||| ||||||||||| || | |||||||||| | | ||||||||||||||||  ||||||||||||| |||||||    
T  24411029 aggagttgtcaatggtttgaggaaaattttgtattgttttcatttgagtcgttgtaattcagttttatcctaaatcgtgcaact 24410946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 284 - 415
Target Start/End: Complemental strand, 11274479 - 11274346
Alignment:
Q  284 tttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgag-gaacatatcgtattgtttttactcgagtcg 382  Q
    |||||| |||||||||||| |||| || || |||||||| |||| || |  ||||||||| ||||||||  ||||||| |||||||||| ||| ||| ||    
T  11274479 tttttagtacttttctttgcatttaaagaccaataagataagagatagatcagttgtcaatggtttgagaaaacatattgtattgttttcacttgagccg 11274380  T
Q  383 ttgtaa-ttcactttatcctaaatcatgcaactc 415  Q
    ||| || ||   ||||||||||||||||||||||    
T  11274379 ttgcaacttgcttttatcctaaatcatgcaactc 11274346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 412
Target Start/End: Original strand, 20083480 - 20083561
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcactt-tatcctaaatcatgcaa 412  Q
    ||||||||||||  ||||||||||||| |  ||||||||||| ||||||  |||||||||| || |||||||||||||||||    
T  20083480 aggagttgtcaatagtttgaggaacattttttattgtttttattcgagtatttgtaattcagttctatcctaaatcatgcaa 20083561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 409
Target Start/End: Complemental strand, 7742967 - 7742891
Alignment:
Q  334 gagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatg 409  Q
    |||||||||| ||||||| |||||| | ||||||||||   ||||||| ||||||||||| ||||||||||||||||    
T  7742967 gagttgtcaatggtttgaagaacattttgtattgttttcgttcgagtctttgtaattcacttttatcctaaatcatg 7742891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 395
Target Start/End: Complemental strand, 22967995 - 22967879
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    ||||||||||| || ||||||||| || | || ||||||||||||    ||| ||||||||| || |||||||||||||||| ||| |||||| | || |    
T  22967995 ctatgtttttagtagttttctttgcatgttaagacaaataagatggattttagaggagttgtgaatggtttgaggaacatattgtactgttttcattcaa 22967896  T
Q  379 gtcgttgtaattcactt 395  Q
    |||  ||||||||||||    
T  22967895 gtcaatgtaattcactt 22967879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 414
Target Start/End: Complemental strand, 26330209 - 26330084
Alignment:
Q  291 tacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtc-gttgtaat 389  Q
    |||||||||||| |||  || ||||||||| |||||| |  || ||||||||| ||| | ||||| |||| |||||||||| ||| ||| | ||||||||    
T  26330209 tacttttctttgcattgtaagacaaataagttgagagatggagtagttgtcaatggtctaaggaatatattgtattgttttcacttgagccagttgtaat 26330110  T
Q  390 tcac-tttatcctaaatcatgcaact 414  Q
    || | ||||||||| |||||||||||    
T  26330109 tcccttttatcctagatcatgcaact 26330084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 18873111 - 18873059
Alignment:
Q  362 gtattgtttttactcgagtcgttgtaattcactttatcctaaatcatgcaactc 415  Q
    |||||||||| | |||||||| | |||||||||||||| |||||||||||||||    
T  18873111 gtattgttttcattcgagtcgct-taattcactttatcttaaatcatgcaactc 18873059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 412
Target Start/End: Original strand, 19331526 - 19331607
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaa 412  Q
    ||||||||||||  ||||||| ||| | | ||||||| || | |||||||||||||||| |  |||||||||||||||||||    
T  19331526 aggagttgtcaattgtttgagaaactttttgtattgtgttcattcgagtcgttgtaatttagttttatcctaaatcatgcaa 19331607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 415
Target Start/End: Original strand, 26070436 - 26070573
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    ||||||||||| |  ||||||||| |||| ||  ||||||||| |  | ||| ||||||||||||   ||||||||| || | |||||||||| | ||||    
T  26070436 ctatgtttttagttattttctttgcattttaaggcaaataagaggtcatttagaggagttgtcaatcatttgaggaaaatttagtattgttttcattcga 26070535  T
Q  379 gtcgttgtaattca-ctttatcctaaatcatgcaactc 415  Q
    ||   |||||||||  |||||| |||||||||||||||    
T  26070536 gttaatgtaattcagttttatcataaatcatgcaactc 26070573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 20694655 - 20694715
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca 392  Q
    |||| ||||||| |||||||||||| | | |||||||||| | ||||||| ||||||||||    
T  20694655 aggatttgtcaatggtttgaggaactttttgtattgttttcattcgagtcattgtaattca 20694715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 3e-36; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 279 - 396
Target Start/End: Original strand, 29544481 - 29544598
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    ||||||||||| || ||||||||| |||| || ||||||||||||||||||| ||||||||||||  ||||||||||||||| |||||||||| ||||||    
T  29544481 ctatgtttttattaattttctttgcatttgaagacaaataagatgagagttagaggagttgtcaatagtttgaggaacatattgtattgttttcactcga 29544580  T
Q  379 gtcgttgtaattcacttt 396  Q
    ||||||||||||||||||    
T  29544581 gtcgttgtaattcacttt 29544598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 249 - 415
Target Start/End: Original strand, 7142030 - 7142197
Alignment:
Q  249 tgatgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtt 348  Q
    |||||||||||||||| ||| || ||||  |||||||||||||| ||||||||| |||| || ||||||||| ||||||  ||| |||||||||| ||||    
T  7142030 tgatgacagagcatcatatgacatttttggctatgtttttaatagttttctttgcatttaaagacaaataagttgagagagatatgagttgtcaatggtt 7142129  T
Q  349 tgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    | ||||||||||  ||||| ||| ||||||||||||||||||||| ||||||| | ||||||||||||    
T  7142130 taaggaacatattttattgctttcactcgagtcgttgtaattcacttttatccaagatcatgcaactc 7142197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 273 - 418
Target Start/End: Original strand, 23124857 - 23125002
Alignment:
Q  273 tttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgttttt 372  Q
    ||||||||||||||||| |||||| ||||  |||| || ||||||||||||||| ||| ||||||||| |  ||| |||||||||||| ||||||||||     
T  23124857 tttttactatgtttttagtacttt-ctttacatttgaagacaaataagatgagatttagaggagttgttagtggtctgaggaacatattgtattgttttc 23124955  T
Q  373 actcgagtcgttgtaattcac-tttatcctaaatcatgcaactctat 418  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||||||    
T  23124956 actcgagtcgttgtaattcacatttatccaaaatcatacaactctat 23125002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 294 - 415
Target Start/End: Complemental strand, 22067944 - 22067822
Alignment:
Q  294 ttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattc-a 392  Q
    |||| |||| |||| || ||||||||||||||||||| |||||||||||| |||||||||||||||  |||||||||| ||||||||| ||||||||| |    
T  22067944 ttttatttgcatttgaagacaaataagatgagagttaaaggagttgtcaatggtttgaggaacataatgtattgttttcactcgagtcattgtaattcaa 22067845  T
Q  393 ctttatcctaaatcatgcaactc 415  Q
     ||||||||| ||||||||||||    
T  22067844 ttttatcctagatcatgcaactc 22067822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 312 - 414
Target Start/End: Complemental strand, 1255333 - 1255230
Alignment:
Q  312 acaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgc 410  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||| | || |||||||||| ||||||||| ||||||||||  |||||||||||||||||    
T  1255333 acaaataagttgagagttagaggagttgtcaatggtttgaggaataaattgtattgttttcactcgagtcattgtaattcatttttatcctaaatcatgc 1255234  T
Q  411 aact 414  Q
    ||||    
T  1255233 aact 1255230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 282 - 411
Target Start/End: Complemental strand, 20470960 - 20470830
Alignment:
Q  282 tgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtc 381  Q
    |||||||| ||||||| ||| ||| | || ||||||||||||| | ||| |||||||||||| ||||||||||||||||  ||||||||| |||  ||||    
T  20470960 tgtttttagtacttttatttatatgtgaagacaaataagatgataattagaggagttgtcaatggtttgaggaacatattatattgttttcacttaagtc 20470861  T
Q  382 gttgtaattcacttt-atcctaaatcatgca 411  Q
    ||||||||||||||| | |||||||||||||    
T  20470860 gttgtaattcactttcagcctaaatcatgca 20470830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 414
Target Start/End: Complemental strand, 21545896 - 21545816
Alignment:
Q  335 agttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaact 414  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||||||||||||||||    
T  21545896 agttgtcaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaactcacttttatcctaaatcatgcaact 21545816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 280 - 414
Target Start/End: Original strand, 7815285 - 7815421
Alignment:
Q  280 tatgtttttaatacttttct-ttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    |||||||||| ||||||| | ||| |||| || | ||||||||||||||||| |||| ||||||| ||||| || ||||||| ||||| |||| |||||     
T  7815285 tatgtttttagtacttttttgttgcatttgaagataaataagatgagagttaaaggacttgtcaatggtttaagaaacatattgtatttttttcactcgg 7815384  T
Q  379 gtcgttgtaattca-ctttatcctaaatcatgcaact 414  Q
    || |||||||||||  ||||| |||||||||||||||    
T  7815385 gtggttgtaattcagttttattctaaatcatgcaact 7815421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 279 - 381
Target Start/End: Original strand, 20446200 - 20446303
Alignment:
Q  279 ctatgtttttaatactttt-ctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcg 377  Q
    ||||||||||||||||||| ||||| |||| || |||| |||||||||| ||| |||||||||||| ||||| || ||||||| || ||||||| ||| |    
T  20446200 ctatgtttttaatactttttctttgcatttgaagacaattaagatgagaattagaggagttgtcaatggtttcagaaacatattgttttgttttcacttg 20446299  T
Q  378 agtc 381  Q
    ||||    
T  20446300 agtc 20446303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 332 - 415
Target Start/End: Original strand, 30405611 - 30405694
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcactttatcctaaatcatgcaactc 415  Q
    ||||||||| || |||||||||||| | | |||||||||||| | || || |||||||||||||||||||||| ||||||||||    
T  30405611 aggagttgttaatggtttgaggaactttttgtattgtttttatttgactcattgtaattcactttatcctaaaccatgcaactc 30405694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 315182 - 315284
Alignment:
Q  314 aaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaa 412  Q
    ||||||||||||||||| |||||||||||| ||||||| ||| |||| ||||| || | ||||||||  |||| |||||  ||||||||| |||||||||    
T  315182 aaataagatgagagttagaggagttgtcaatggtttgaagaatatattgtattattgtcactcgagttattgttattcagttttatcctagatcatgcaa 315281  T
Q  413 ctc 415  Q
    |||    
T  315282 ctc 315284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 413
Target Start/End: Complemental strand, 20461746 - 20461665
Alignment:
Q  333 ggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcacttt-atcctaaatcatgcaac 413  Q
    ||||||||||| |||||||||||||  | |||||||||| | |||||||||||||| ||| ||| ||||||||||| |||||    
T  20461746 ggagttgtcaatggtttgaggaacaatttgtattgttttcattcgagtcgttgtaactcaatttcatcctaaatcacgcaac 20461665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 380
Target Start/End: Original strand, 21471728 - 21471860
Alignment:
Q  248 gtgatgacagagcatcacatgccactttttactatgtttttaatactttt-ctttgtatttcaaaacaaataagatgagagttataggagttgtcaacgg 346  Q
    ||||||||||||||||| |||||| ||||   |||||||||| ||||||| | ||| |||| || ||||||||||||| | ||| |||| ||||||| |     
T  21471728 gtgatgacagagcatcatatgcca-ttttggttatgtttttagtactttttccttgcatttgaagacaaataagatgatatttagaggatttgtcaatga 21471826  T
Q  347 tttgaggaacatatcgtattgtttttactcgagt 380  Q
    ||| | ||||||||  ||||||||| ||||||||    
T  21471827 ttttaagaacatattatattgttttcactcgagt 21471860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 415
Target Start/End: Original strand, 4828806 - 4828890
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    ||||||| |||| |||||||||||| | | ||||| |||||| |||| || |||||||| || ||||||||||||||||||||||    
T  4828806 aggagttttcaatggtttgaggaactttttgtattctttttaatcgattcattgtaatttacttttatcctaaatcatgcaactc 4828890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 414
Target Start/End: Original strand, 46054660 - 46054796
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    |||||||||||||  |||| ||||||||| ||  |||||||||||  | ||| |||||||||||  | |||||||||||  |  ||||||||| | || |    
T  46054660 ctatgtttttaattattttttttgtatttgaaggcaaataagatgtcatttaaaggagttgtcattgatttgaggaacaatttatattgttttaattcaa 46054759  T
Q  379 gtcgttgtaattcac-tttatcctaaatcatgcaact 414  Q
    |||||||||||| || |||||  ||||||||||||||    
T  46054760 gtcgttgtaatttacttttataataaatcatgcaact 46054796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 414
Target Start/End: Complemental strand, 3269065 - 3268982
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaact 414  Q
    |||||||||||  |||||||| ||||| | ||||||||||   | |||| |||||||||||| |||||||||||||||||||||    
T  3269065 aggagttgtcattggtttgagtaacattttgtattgttttcgtttgagttgttgtaattcacttttatcctaaatcatgcaact 3268982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 294 - 414
Target Start/End: Complemental strand, 2632574 - 2632453
Alignment:
Q  294 ttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca- 392  Q
    ||||||||| |||| || || ||||  |||||||||| |||||||||  | | ||| |||||||||| ||||| |||| | |||| |||||||||||||     
T  2632574 ttttctttgcatttaaagactaatagtatgagagttagaggagttgttgatgattttaggaacatattgtattattttcaatcgaatcgttgtaattcag 2632475  T
Q  393 ctttatcctaaatcatgcaact 414  Q
     ||||||| | |||||||||||    
T  2632474 ttttatccaagatcatgcaact 2632453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 392
Target Start/End: Complemental strand, 7372666 - 7372606
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca 392  Q
    |||||||||||  ||||||| |||| | | |||||||||| | ||||||||||||||||||    
T  7372666 aggagttgtcattggtttgatgaactttttgtattgttttcattcgagtcgttgtaattca 7372606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 247 - 414
Target Start/End: Complemental strand, 21505324 - 21505156
Alignment:
Q  247 agtgatgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacgg 346  Q
    ||||||||| |||||||| |||  | ||||  ||||||||||| || ||||||||| |||| || ||||||||||||||||||| || ||||||||| ||    
T  21505324 agtgatgacggagcatcatatgatatttttggctatgtttttagtatttttctttgcatttgaagacaaataagatgagagttagagtagttgtcaatgg 21505225  T
Q  347 tttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaact 414  Q
    |||||||| ||||| |||||||||| ||||||||| || ||||| || |||||||||||||||||||||    
T  21505224 tttgaggagcatattgtattgttttcactcgagtctttataatttacttttatcctaaatcatgcaact 21505156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 248 - 415
Target Start/End: Complemental strand, 28278606 - 28278439
Alignment:
Q  248 gtgatgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggt 347  Q
    ||||||||||||||||| |||  | ||||| ||||||||| | |||||||||||| |||| ||  ||||||||| |||||||| |||| || |||| |||    
T  28278606 gtgatgacagagcatcatatgatattttttgctatgtttt-agtacttttctttgcatttgaaggcaaataagaagagagttagaggatttctcaatggt 28278508  T
Q  348 ttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    |||| |||||||  ||||| |||| ||| ||||||||||||||||| ||||||||| ||||||||||||    
T  28278507 ttgaagaacatagtgtattattttcacttgagtcgttgtaattcacttttatcctagatcatgcaactc 28278439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 249 - 392
Target Start/End: Original strand, 35707735 - 35707878
Alignment:
Q  249 tgatgacagagcatcacatgccactttttactatgtttttaatactttt-ctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggt 347  Q
    |||||||||||||||| ||| || |||| |||||||||||| ||||||| |||||||||| || ||||||||||||||||||| || ||||||||| |||    
T  35707735 tgatgacagagcatcatatgaca-ttttgactatgtttttagtactttttctttgtatttgaagacaaataagatgagagttagagaagttgtcaatggt 35707833  T
Q  348 ttgaggaacatatcgtattgtttttactcgagtcgttgtaattca 392  Q
    ||||| ||||| | |||||||||| ||| || | |||||||||||    
T  35707834 ttgagaaacatgttgtattgttttcacttgatttgttgtaattca 35707878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 249 - 415
Target Start/End: Original strand, 25473969 - 25474136
Alignment:
Q  249 tgatgacagagcatcacatgccactttttactatgtttttaatac-ttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggt 347  Q
    |||||||||||||||| ||| || ||||  ||||||||||| ||| |||| |||  |||| || ||||||||||||||||||| ||||||||||||  ||    
T  25473969 tgatgacagagcatcatatgaca-ttttggctatgtttttagtacattttattttcatttgaagacaaataagatgagagttagaggagttgtcaattgt 25474067  T
Q  348 ttgaggaacatatcgtattgtttttactcgagtcgttgtaattcact-ttatcctaaatcatgcaactc 415  Q
    ||||||||||||| | |||| ||| |||| || || ||||||||| | |||||||| ||||||||||||    
T  25474068 ttgaggaacatattgaattggtttcactcaagacgctgtaattcagtattatcctagatcatgcaactc 25474136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 312 - 415
Target Start/End: Original strand, 30998766 - 30998870
Alignment:
Q  312 acaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgc 410  Q
    ||||||||||||||||||| | |||||||||| |||||||||||||||| |||||||||| ||| ||||||||||| ||||  ||||||||| ||||| |    
T  30998766 acaaataagatgagagttagatgagttgtcaatggtttgaggaacatattgtattgttttcacttgagtcgttgtacttcagttttatcctagatcatac 30998865  T
Q  411 aactc 415  Q
    |||||    
T  30998866 aactc 30998870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 412
Target Start/End: Original strand, 35031696 - 35031798
Alignment:
Q  311 aacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatg 409  Q
    |||| |||||||||||| || ||||||||| || |||||||||||||||| |||||||||| |||||||||||||||| | || ||||||||| ||||||    
T  35031696 aacatataagatgagagatagaggagttgttaatggtttgaggaacatattgtattgttttcactcgagtcgttgtaacttacttttatcctagatcatg 35031795  T
Q  410 caa 412  Q
    |||    
T  35031796 caa 35031798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 415
Target Start/End: Complemental strand, 16593890 - 16593766
Alignment:
Q  294 ttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgagga--acatatcgtattgtttttactcgagtcgttgtaattc 391  Q
    |||| |||| |||| || ||||||||||| |||||||||||||||||||| ||||||| ||  ||||||  ||||||||| |||||||| ||| ||||||    
T  16593890 ttttttttgcatttgaagacaaataagattagagttataggagttgtcaatggtttgatgaacacatattatattgttttcactcgagttgttttaattc 16593791  T
Q  392 a-ctttatcctaaatcatgcaactc 415  Q
    |  ||||||||| ||||||||||||    
T  16593790 agttttatcctagatcatgcaactc 16593766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 295 - 418
Target Start/End: Complemental strand, 21843139 - 21843015
Alignment:
Q  295 tttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcact 394  Q
    |||||||| |||| || ||||||||| ||  | ||| |||||||| ||| ||||| |||||||| | |||||||||| | ||||||| |||||||| |||    
T  21843139 tttctttgcatttgaagacaaataagttgtaatttagaggagttgccaatggttttaggaacatgttgtattgttttcattcgagtcattgtaatttact 21843040  T
Q  395 tt-atcctaaatcatgcaactctat 418  Q
    || ||||||||||||||||||||||    
T  21843039 tttatcctaaatcatgcaactctat 21843015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 415
Target Start/End: Original strand, 15829136 - 15829229
Alignment:
Q  319 agatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcactttatcctaaatcatgcaactc 415  Q
    |||||||||||| |||||||||||| ||||||||||||  || |||||||||| |||  ||||||||||| |   ||||||||||||||||||||||    
T  15829136 agatgagagttagaggagttgtcaatggtttgaggaacgcattgtattgttttcacttaagtcgttgtaact---tttatcctaaatcatgcaactc 15829229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 273 - 389
Target Start/End: Complemental strand, 19949714 - 19949597
Alignment:
Q  273 tttttactatgtttttaatactttt-ctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttt 371  Q
    ||||| ||||||||||| ||||||| |||||||||| || | |||||| ||||||| |  ||||||||| ||  ||||||||||||||| ||||| ||||    
T  19949714 ttttttctatgtttttagtactttttctttgtatttgaagataaataacatgagagattgaggagttgttaatagtttgaggaacatattgtattatttt 19949615  T
Q  372 tactcgagtcgttgtaat 389  Q
     ||| |||||||||||||    
T  19949614 cacttgagtcgttgtaat 19949597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 392
Target Start/End: Original strand, 1733063 - 1733175
Alignment:
Q  280 tatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgag 379  Q
    |||||||||| ||||||| |||  |||| || |||||| |||||||||||| |||||||||||| |  ||||| |||| || |||||||||| | | |||    
T  1733063 tatgtttttagtactttttttttcatttgaagacaaatgagatgagagttagaggagttgtcaatgagttgagaaacaaattgtattgttttcatttgag 1733162  T
Q  380 tcgttgtaattca 392  Q
    |||||||||||||    
T  1733163 tcgttgtaattca 1733175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 414
Target Start/End: Complemental strand, 21844766 - 21844646
Alignment:
Q  295 tttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcact 394  Q
    |||||||| |||| || ||||||||| ||  | ||| |||||||||||| ||||| |||||||| |  ||||||||| | ||||||| |||||||| |||    
T  21844766 tttctttgcatttgaagacaaataagttgtaatttagaggagttgtcaatggttttaggaacatgttatattgttttcattcgagtcattgtaatttact 21844667  T
Q  395 -ttatcctaaatcatgcaact 414  Q
     ||||||||||||||||||||    
T  21844666 cttatcctaaatcatgcaact 21844646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 415
Target Start/End: Original strand, 24047402 - 24047481
Alignment:
Q  337 ttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    ||||||| ||||| |||||||| | |||||||||| | ||||||| ||||||||||| |||||||||||| |||||||||    
T  24047402 ttgtcaatggtttaaggaacattttgtattgttttcattcgagtcattgtaattcacttttatcctaaattatgcaactc 24047481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 415
Target Start/End: Complemental strand, 27918086 - 27917999
Alignment:
Q  329 tataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    ||||||||||||||  |||||||||||| |   |||||||||| | | ||||||||||||||||| ||||| ||||||||||||||||    
T  27918086 tataggagttgtcattggtttgaggaacgttgggtattgttttcatttgagtcgttgtaattcacttttatactaaatcatgcaactc 27917999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 17152168 - 17152253
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactct 416  Q
    |||||||||||| ||||||||||| || | ||||| |||| | |||||||||||||||| || |||||| ||| ||||||||||||    
T  17152168 aggagttgtcaatggtttgaggaatattttgtattattttcattcgagtcgttgtaattaacttttatcgtaattcatgcaactct 17152253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 339 - 415
Target Start/End: Complemental strand, 34063938 - 34063861
Alignment:
Q  339 gtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcact-ttatcctaaatcatgcaactc 415  Q
    ||||| |||||| ||||| | | |||||||||| | |||||| ||||||||||||| |||||||||||||||||||||    
T  34063938 gtcaatggtttgtggaactttttgtattgttttcattcgagttgttgtaattcactattatcctaaatcatgcaactc 34063861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 396
Target Start/End: Original strand, 32619604 - 32619717
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    |||| |||||| |||||||||||| |||| || ||||||||  |||||| || ||||||||| || |||| ||||||||     ||||||||| | ||||    
T  32619604 ctatatttttagtacttttctttgcatttgaagacaaataacttgagagatagaggagttgttaatggttagaggaaca----atattgttttcaatcga 32619699  T
Q  379 gtcgttgtaattcacttt 396  Q
    ||||||||||| ||||||    
T  32619700 gtcgttgtaatgcacttt 32619717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 416
Target Start/End: Original strand, 39730475 - 39730547
Alignment:
Q  345 ggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactct 416  Q
    ||||| |||||||| |  ||| ||||||| || |||||||||||||||| |||||||||||||||||||||||    
T  39730475 ggtttaaggaacattttctatagtttttattcaagtcgttgtaattcacttttatcctaaatcatgcaactct 39730547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 415
Target Start/End: Original strand, 19541049 - 19541136
Alignment:
Q  329 tataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaactc 415  Q
    |||||||||||| || |||||||||||| | | |||||  ||| | ||||||| ||||||||||  ||||||||||||||||||||||    
T  19541049 tataggagttgttaatggtttgaggaactttttgtatttatttcaatcgagtcattgtaattcagttttatcctaaatcatgcaactc 19541136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 415
Target Start/End: Complemental strand, 18236406 - 18236318
Alignment:
Q  328 ttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    |||||| ||||||||| |||||||| ||||  |  ||||||||| | |||||| ||| |||||||| |||||| |||||||||||||||    
T  18236406 ttatagaagttgtcaatggtttgagaaacaatttatattgttttcattcgagttgttataattcacttttatcttaaatcatgcaactc 18236318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 282 - 417
Target Start/End: Complemental strand, 13759602 - 13759465
Alignment:
Q  282 tgtttttaatacttttc-tttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagt 380  Q
    ||||||||||||||||  ||||||||| || | ||||||||||||||||| |||||||||||| |||||||||||||||| | |||||||| |||||| |    
T  13759602 tgtttttaatactttttatttgtatttgaagataaataagatgagagttagaggagttgtcaatggtttgaggaacatattgaattgttttcactcgaat 13759503  T
Q  381 cgttgtaattc-actttatcctaaatcatgcaactcta 417  Q
    ||||||||||| | ||||| ||| ||||||||||||||    
T  13759502 cgttgtaattcaattttattctatatcatgcaactcta 13759465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 279 - 414
Target Start/End: Original strand, 16527858 - 16527988
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    ||||||||||| ||||||||||||      || ||||||||||||||||||| ||||||||||   |||||||| | |||||  ||||||||| ||||||    
T  16527858 ctatgtttttagtacttttctttg------aagacaaataagatgagagttagaggagttgtcggtggtttgagtaccatattatattgttttcactcga 16527951  T
Q  379 gtcgttgtaattca-ctttatcctaaatcatgcaact 414  Q
    ||||||||||||||  ||||||||| |||||||||||    
T  16527952 gtcgttgtaattcatttttatcctagatcatgcaact 16527988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 279 - 414
Target Start/End: Original strand, 30355288 - 30355423
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    ||||||||||| |||||||  ||| |||| ||   ||||||||||||||||| || ||||||||| |||||||  ||||||| ||||| |||| |||| |    
T  30355288 ctatgtttttagtacttttacttgcatttgaaggtaaataagatgagagttagagaagttgtcaatggtttgataaacatattgtatt-ttttcactcaa 30355386  T
Q  379 gtcgttgtaattcac-tttatcctaaatcatgcaact 414  Q
    |||||| |||||||| |||||| ||||||||||||||    
T  30355387 gtcgttttaattcacttttatcataaatcatgcaact 30355423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 418
Target Start/End: Complemental strand, 16387400 - 16387259
Alignment:
Q  280 tatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgag 379  Q
    |||||||||| || |||||||||| ||| || || |||||||||  | ||| | |||||||||| |||||||||||  ||| |||||||||||| |||||    
T  16387400 tatgtttttagtagttttctttgtgtttgaagacgaataagatgtaatttagatgagttgtcaatggtttgaggaatttattgtattgtttttattcgag 16387301  T
Q  380 tcgttgtaattca-ctttatcctaaa--tcatgcaactctat 418  Q
     |||||||||||| | ||||| ||||  ||||||||||||||    
T  16387300 ccgttgtaattcaccgttatcttaaatctcatgcaactctat 16387259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 415
Target Start/End: Original strand, 15574902 - 15575023
Alignment:
Q  294 ttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca- 392  Q
    ||||||||| |||| || ||||||||||||||| ||| |||| |||||||  ||||||||||||| |  ||||||||| |||| ||||||||||||| |     
T  15574902 ttttctttgcatttgaagacaaataagatgagatttagaggaattgtcaa-tgtttgaggaacatgttatattgttttcactctagtcgttgtaatttag 15575000  T
Q  393 ctttatcctaaatcatgcaactc 415  Q
     |||| |||| ||||||||||||    
T  15575001 ttttagcctagatcatgcaactc 15575023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 415
Target Start/End: Complemental strand, 17860556 - 17860464
Alignment:
Q  324 agagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    ||||||| || | ||||||| |||||||||||||| | ||||| |||| ||||||||| |||| ||| || |||||| |||||||||||||||    
T  17860556 agagttagagaatttgtcaatggtttgaggaacattttgtattattttcactcgagtcattgtcatttacttttatcttaaatcatgcaactc 17860464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 413
Target Start/End: Complemental strand, 26512931 - 26512795
Alignment:
Q  278 actatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcg 377  Q
    |||||||||||| |  |||| |||| |||| ||  ||||||||| |  | ||| |||||||||||| |||||| | ||||| | |||||||||| | |||    
T  26512931 actatgtttttagttattttgtttgcatttgaaggcaaataagaggtcatttagaggagttgtcaatggtttgtgtaacattttgtattgttttcattcg 26512832  T
Q  378 agtcgttgtaattcac-tttatcctaaatcatgcaac 413  Q
    | |||||||||||||| |||| |||| ||||||||||    
T  26512831 attcgttgtaattcacttttaacctagatcatgcaac 26512795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 413
Target Start/End: Complemental strand, 26518047 - 26517911
Alignment:
Q  278 actatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcg 377  Q
    |||||||||||| |  |||| |||| |||| ||  ||||||||| |  | ||| |||||||||||| |||||| | ||||| | |||||||||| | |||    
T  26518047 actatgtttttagttattttgtttgcatttgaaggcaaataagaggtcatttagaggagttgtcaatggtttgtgtaacattttgtattgttttcattcg 26517948  T
Q  378 agtcgttgtaattcac-tttatcctaaatcatgcaac 413  Q
    | |||||||||||||| |||| |||| ||||||||||    
T  26517947 attcgttgtaattcacttttaacctagatcatgcaac 26517911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 15576315 - 15576254
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgt 340  Q
    ||||||||||| |||||||||||| |||| || ||||||| ||||||| ||| |||||||||    
T  15576315 ctatgtttttagtacttttctttgaatttaaagacaaataggatgagaattagaggagttgt 15576254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 414
Target Start/End: Complemental strand, 20495946 - 20495811
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    ||||||||||| || |||||||||||||| ||  ||| ||||| |  |  || || |||| |||| |||||||||||||| | | |||||||||| | ||    
T  20495946 ctatgtttttagtaattttctttgtatttgaaggcaattaagaggtcatatagagaagttatcaatggtttgaggaacattttg-attgtttttatttga 20495848  T
Q  379 gtcgttgtaattc-actttatcctaaatcatgcaact 414  Q
    ||||||||||||| | |||||| ||||| ||||||||    
T  20495847 gtcgttgtaattcaattttatcttaaattatgcaact 20495811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 5e-29; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 280 - 415
Target Start/End: Complemental strand, 34864443 - 34864309
Alignment:
Q  280 tatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgag 379  Q
    |||||||||| ||||||||||||||||| || ||||||||||| | ||||| |||||||||||| |||||||||||| |||| ||||||||| ||||  |    
T  34864443 tatgtttttagtacttttctttgtatttgaagacaaataagataaaagttagaggagttgtcaatggtttgaggaacgtatcatattgttttcactc--g 34864346  T
Q  380 tcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    || ||||||||||| |||||||||||| ||| |||||    
T  34864345 tcattgtaattcacttttatcctaaattatgaaactc 34864309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 273 - 409
Target Start/End: Complemental strand, 5906879 - 5906742
Alignment:
Q  273 tttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgttttt 372  Q
    ||||| ||||||||||| ||||||| |||| |||| || ||||| ||||||||||||| |||| ||||||| ||||||||||||||||  |||||||||     
T  5906879 tttttgctatgtttttagtacttttatttgcatttgaagacaaacaagatgagagttagaggaattgtcaatggtttgaggaacatattatattgttttc 5906780  T
Q  373 actcgagtcgttgtaattcac-tttatcctaaatcatg 409  Q
    ||||||||| ||  ||||||| ||||||| ||||||||    
T  5906779 actcgagtcattacaattcacttttatcccaaatcatg 5906742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 284 - 415
Target Start/End: Complemental strand, 25315379 - 25315247
Alignment:
Q  284 tttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgt 383  Q
    |||||| |||||||||||  |||| || | |||||||||||||| || |||||||||||| | |||||||||||||| |||||||||| ||| |||||||    
T  25315379 tttttagtacttttctttacatttgaagataaataagatgagagatagaggagttgtcaatgctttgaggaacatattgtattgttttcacttgagtcgt 25315280  T
Q  384 tgtaattca-ctttatcctaaatcatgcaactc 415  Q
    ||||||| |  ||||||||| ||||||||||||    
T  25315279 tgtaattaagttttatcctagatcatgcaactc 25315247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 252 - 396
Target Start/End: Complemental strand, 12111510 - 12111367
Alignment:
Q  252 tgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttga 351  Q
    ||||||||||||| ||| || |||||  |||||||||| ||||||| |||| |||| || ||||| ||||||||| | | |||||||||||| |||||||    
T  12111510 tgacagagcatcatatgacattttttgttatgtttttagtacttttatttgcatttgaagacaaa-aagatgagaat-agaggagttgtcaatggtttga 12111413  T
Q  352 ggaacatatcgtattgttttt-actcgagtcgttgtaattcacttt 396  Q
    ||||||||| ||||| ||||| || |||||||||||||||||||||    
T  12111412 ggaacatattgtattttttttcacacgagtcgttgtaattcacttt 12111367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 396
Target Start/End: Original strand, 18897956 - 18898070
Alignment:
Q  282 tgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtc 381  Q
    |||||||| |||||||||||| |||| || ||||||||| |||||| || | || ||||||| ||||| |||||||||| |||||||||| ||||||| |    
T  18897956 tgtttttactacttttctttgcatttgaagacaaataagttgagagatagatgatttgtcaatggtttaaggaacatattgtattgttttcactcgagcc 18898055  T
Q  382 gttgtaattcacttt 396  Q
    |||||||||| ||||    
T  18898056 gttgtaattcgcttt 18898070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 291 - 415
Target Start/End: Complemental strand, 1676436 - 1676311
Alignment:
Q  291 tacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaatt 390  Q
    |||||||||||  |||| || ||||||||||||| || || |||||||||||| |||||||||||||||| ||| |||||| | ||||||  ||||||||    
T  1676436 tacttttctttacatttgaagacaaataagatgaaagatagaggagttgtcaatggtttgaggaacatattgtaatgttttcattcgagtttttgtaatt 1676337  T
Q  391 c-actttatcctaaatcatgcaactc 415  Q
    | | ||||||||| ||||||||||||    
T  1676336 caattttatcctatatcatgcaactc 1676311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 291 - 415
Target Start/End: Complemental strand, 1682964 - 1682839
Alignment:
Q  291 tacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaatt 390  Q
    |||||||||||  |||| || ||||||||||||| || || |||||||||||| |||||||||||||||| ||| |||||| | ||||||  ||||||||    
T  1682964 tacttttctttacatttgaagacaaataagatgaaagatagaggagttgtcaatggtttgaggaacatattgtaatgttttcattcgagtttttgtaatt 1682865  T
Q  391 c-actttatcctaaatcatgcaactc 415  Q
    | | ||||||||| ||||||||||||    
T  1682864 caattttatcctatatcatgcaactc 1682839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 248 - 414
Target Start/End: Original strand, 27302709 - 27302876
Alignment:
Q  248 gtgatgacagagcatcacatgccactttttactatgttttt-aatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacgg 346  Q
    ||||||||| ||||||| ||  || |||| ||||||||||| |||| ||||| ||| |||| || ||||||| ||||| || || || ||||||||| ||    
T  27302709 gtgatgacaaagcatcatataaca-ttttgactatgttttttaataattttcgttgcatttgaagacaaatatgatgatagatagagaagttgtcaatgg 27302807  T
Q  347 tttgaggaacatatcgtattgtttttactcgagtcgttgtaattcactt-tatcctaaatcatgcaact 414  Q
    |||||||||||| | |||||||||| ||||||||| |||||||||| || ||| ||| |||||||||||    
T  27302808 tttgaggaacattttgtattgttttcactcgagtcattgtaattcaattatatactagatcatgcaact 27302876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 250 - 392
Target Start/End: Complemental strand, 9783165 - 9783023
Alignment:
Q  250 gatgacagagcatcacatgccactttttactatgtttttaatactttt-ctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtt 348  Q
    ||||||||||||||| ||| || ||||  ||||||||||| ||||||| ||||  |||| ||  ||||| |||||||||||| ||||||||||||  |||    
T  9783165 gatgacagagcatcatatgaca-ttttgcctatgtttttagtactttttctttacatttgaaggcaaatgagatgagagttagaggagttgtcaatagtt 9783067  T
Q  349 tgaggaacatatcgtattgtttttactcgagtcgttgtaattca 392  Q
    |||||||||||| |||||||||| |||| | || ||||||||||    
T  9783066 tgaggaacatattgtattgttttcactcaattcattgtaattca 9783023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 251 - 396
Target Start/End: Original strand, 15192137 - 15192282
Alignment:
Q  251 atgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttg 350  Q
    |||||||||||||| ||| || |||||  |||||||||  |||||||||||| |||| || ||||||||||||||||     |||||||| ||   ||||    
T  15192137 atgacagagcatcatatgacattttttgttatgtttttcgtacttttctttgcatttgaagacaaataagatgagagacgggggagttgttaattttttg 15192236  T
Q  351 aggaacatatcgtattgtttttactcgagtcgttgtaattcacttt 396  Q
     ||||||||| |||||||||| |||| ||| |||||||||||||||    
T  15192237 tggaacatattgtattgttttcactcaagttgttgtaattcacttt 15192282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 285 - 376
Target Start/End: Original strand, 4953650 - 4953741
Alignment:
Q  285 ttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactc 376  Q
    ||||| || |||||||||||||| || | |||||||||| ||| || ||||||||| || |||||||||||||||| |||||||||| ||||    
T  4953650 ttttagtatttttctttgtatttgaagagaaataagatgtgagataaaggagttgttaatggtttgaggaacatattgtattgttttcactc 4953741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 278 - 415
Target Start/End: Original strand, 46647157 - 46647295
Alignment:
Q  278 actatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcg 377  Q
    ||||||||||||||  |||||||||||||| ||   ||||||||  | | ||| || ||||||||| ||||| | ||| || | |||||||||| | ||     
T  46647157 actatgtttttaattattttctttgtatttgaaggaaaataagagaaaatttagagaagttgtcaatggtttcaagaatattttgtattgttttcattct 46647256  T
Q  378 agtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  46647257 agtcggtgtaattcacttttatcctaaatcatgcaactc 46647295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 415
Target Start/End: Complemental strand, 10320400 - 10320235
Alignment:
Q  251 atgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttg 350  Q
    |||| ||||||||| ||| || ||||  ||||||||||| || ||||||||  |||| || | ||| ||| | || | || | ||||||| ||  ||| |    
T  10320400 atgatagagcatcatatgacatttttcgctatgtttttagtaattttctttccatttgaagataaaaaagtttagcggtagacgagttgttaatagttag 10320301  T
Q  351 aggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    || ||||||| ||||| |||| ||||||||||||||||||||| ||||||||| | ||||||||||    
T  10320300 agaaacatattgtattcttttcactcgagtcgttgtaattcacttttatcctagaccatgcaactc 10320235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 356
Target Start/End: Complemental strand, 25050218 - 25050141
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaac 356  Q
    ||||||||||| || |||| ||||||||| || ||||||||||||| ||||| || | || |||||||||||||||||    
T  25050218 ctatgtttttagtatttttatttgtatttgaagacaaataagatgaaagttagagaaattatcaacggtttgaggaac 25050141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 414
Target Start/End: Complemental strand, 47024866 - 47024773
Alignment:
Q  322 tgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaact 414  Q
    |||||| || || ||||||||| |||||||  || |||| |||||||||| ||||||| |||| |||||||| ||||||||| |||||||||||    
T  47024866 tgagagatagagtagttgtcaatggtttgaaaaatatattgtattgttttcactcgagccgttctaattcacttttatcctagatcatgcaact 47024773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 414
Target Start/End: Original strand, 22119608 - 22119744
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    ||||||||||| |  ||||||||| |||| ||  ||||| ||| |  | |||||||||||||||| ||||||||||||| || ||| ||||||   ||||    
T  22119608 ctatgtttttagttattttctttgcatttgaaggcaaattagaagttatttataggagttgtcaatggtttgaggaacaaattgtaatgttttcgttcga 22119707  T
Q  379 gtcgttgtaattcac-tttatcctaaatcatgcaact 414  Q
    ||| |||||||| || |||| || |||||||||||||    
T  22119708 gtcattgtaatttacttttacccaaaatcatgcaact 22119744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 13275831 - 13275759
Alignment:
Q  345 ggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcacttt-atcctaaatcatgcaactct 416  Q
    |||||||| ||||| | |||||||||| | |||||||||| ||||||||||| |||| ||||||| |||||||    
T  13275831 ggtttgagaaacatgttgtattgttttcattcgagtcgttataattcactttcatcccaaatcatacaactct 13275759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 414
Target Start/End: Original strand, 24925767 - 24925903
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    ||||||||||| |  |||| ||||||||| || | |||||||| |  | ||| | ||||||||||  ||||||| ||||| | |||||||||| | | ||    
T  24925767 ctatgtttttagttattttatttgtatttgaagataaataagaagtcatttaaaagagttgtcaatcgtttgagtaacattttgtattgttttcatttga 24925866  T
Q  379 gtcgttgtaattcac-tttatcctaaatcatgcaact 414  Q
    |||| |||||||||| |||||| ||||||||| ||||    
T  24925867 gtcgctgtaattcacttttatcataaatcatgtaact 24925903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 415
Target Start/End: Complemental strand, 1695934 - 1695863
Alignment:
Q  345 ggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcacttt-atcctaaatcatgcaactc 415  Q
    ||||| |||||||||| |||||| ||||| | ||||| |||||||||| ||| |||||| ||||||||||||    
T  1695934 ggtttcaggaacatattgtattggttttatttgagtctttgtaattcaattttatcctagatcatgcaactc 1695863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 349
Target Start/End: Complemental strand, 1696715 - 1696652
Alignment:
Q  286 tttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggttt 349  Q
    |||| ||||||| |||  |||| || |||||||||||||||| ||||||||||||||| |||||    
T  1696715 tttagtacttttatttacatttgaagacaaataagatgagagatataggagttgtcaatggttt 1696652  T

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Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 415
Target Start/End: Complemental strand, 17026759 - 17026712
Alignment:
Q  369 ttttactcgagtcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||||||    
T  17026759 ttttactcgagttgttgtaattcacttttatcctagatcatgcaactc 17026712  T

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Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 396
Target Start/End: Original strand, 10576471 - 10576532
Alignment:
Q  335 agttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcacttt 396  Q
    ||||||| | ||||||| |||||| | |||||||||| | ||||||| ||||||||||||||    
T  10576471 agttgtccatggtttgaagaacattttgtattgttttcattcgagtcattgtaattcacttt 10576532  T

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Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 415
Target Start/End: Original strand, 19601813 - 19601897
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcacttt-atcctaaatcatgcaactc 415  Q
    |||||||||||  |||||||||||| | |  |||| |||| | || | | ||||||||||||||| |||||||||||||||||||    
T  19601813 aggagttgtcattggtttgaggaactttttctatttttttcattcaaattgttgtaattcacttttatcctaaatcatgcaactc 19601897  T

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Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 21077248 - 21077308
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca 392  Q
    |||||||||||| |||||||| ||| | | ||||| |||||| ||||||||||||| ||||    
T  21077248 aggagttgtcaatggtttgagaaaccttttgtattatttttattcgagtcgttgtagttca 21077308  T

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Target: scaffold0171 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 249 - 396
Target Start/End: Original strand, 6128 - 6275
Alignment:
Q  249 tgatgacagagcatcacatgccactttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtt 348  Q
    |||||||| ||||||| ||| || ||||  ||||||||||| |||||||||||  |||| || ||||||||||||||||||||| ||||| |||| ||||    
T  6128 tgatgacatagcatcatatggcatttttggctatgtttttagtacttttctttccatttaaacacaaataagatgagagttatatgagttttcaatggtt 6227  T
Q  349 tgaggaacatatcgtattgtttttactcgagtcgttgtaattcacttt 396  Q
    |||||||||||  ||||| |||| |||| |||| |||||||| |||||    
T  6228 tgaggaacataatgtattattttcactcaagtcattgtaatttacttt 6275  T

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Target: scaffold0171; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 273 - 414
Target Start/End: Original strand, 21353 - 21495
Alignment:
Q  273 tttttactatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgttttt 372  Q
    |||||| |||||||||| |  ||||||||| |||| || | |||||||||   ||||||| ||| | | || |||||||||||| ||| ||||||||||     
T  21353 tttttattatgtttttagtgtttttctttgcatttgaagaaaaataagatttaagttatatgagatctaaagggtttgaggaacttattgtattgttttc 21452  T
Q  373 actcgagtcgttgtaattcac-tttatcctaaatcatgcaact 414  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  21453 actcgagtcgttgtaattcacttttatcctaaatcatgcaact 21495  T

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Target: scaffold0386 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 280 - 415
Target Start/End: Complemental strand, 13223 - 13087
Alignment:
Q  280 tatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgag 379  Q
    |||||||||| ||||||| |||  || | || ||||||||||||||||||| |||| || |||| |||||| |||  |||| ||||| |||  || ||||    
T  13223 tatgtttttagtacttttattttcatattaagacaaataagatgagagttagaggatttttcaatggtttgtggattatattgtattctttccacacgag 13124  T
Q  380 tcgttgtaattcac-tttatcctaaatcatgcaactc 415  Q
    | |||| ||||||| |||||||||||| |||||||||    
T  13123 ttgttggaattcacttttatcctaaattatgcaactc 13087  T

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Target: scaffold0386; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 415
Target Start/End: Complemental strand, 8857 - 8725
Alignment:
Q  284 tttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgt 383  Q
    |||||| ||||||| |||  |||| || | |||||||||||| |||| |||| ||||||| |||| |||||   ||| |||||||||| |||||| | ||    
T  8857 tttttagtacttttattttcattttaagaaaaataagatgagggttagaggatttgtcaatggttagaggattgtattgtattgttttcactcgacttgt 8758  T
Q  384 tgtaattcac-tttatcctaaatcatgcaactc 415  Q
     ||||||||| ||||||||||||  ||||||||    
T  8757 agtaattcacttttatcctaaattgtgcaactc 8725  T

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Target: scaffold1149 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 414
Target Start/End: Original strand, 1796 - 1882
Alignment:
Q  328 ttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattcactttatcctaaatcatgcaact 414  Q
    |||||||| ||||||  ||||||| |||| | | ||||||||||   ||||| ||||||||||||||||||| | ||||||||||||    
T  1796 ttataggatttgtcattggtttgaagaaccttttgtattgttttcgttcgagccgttgtaattcactttatctttaatcatgcaact 1882  T

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Target: scaffold0043 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 332 - 416
Target Start/End: Original strand, 58760 - 58845
Alignment:
Q  332 aggagttgtcaacggtttgaggaacatatcgtattgtttttactcgagtcgttgtaattca-ctttatcctaaatcatgcaactct 416  Q
    |||||||||||| |||||||||||| | | |||||||||| | ||| ||| ||||||| ||  |||||||| ||||||||||||||    
T  58760 aggagttgtcaatggtttgaggaactttttgtattgttttcattcgggtcattgtaatccaggtttatcctgaatcatgcaactct 58845  T

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Target: scaffold0188 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 414
Target Start/End: Complemental strand, 27107 - 26972
Alignment:
Q  279 ctatgtttttaatacttttctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggtttgaggaacatatcgtattgtttttactcga 378  Q
    ||||||||||| |||||||||||| |||| || | |||||||||   ||||| | |||||||| | || ||||||| || || ||| ||||||  ||| |    
T  27107 ctatgtttttagtacttttctttgcatttgaagataaataagatagaagttacaagagttgtctatggattgaggagcaaattgta-tgttttcgctcaa 27009  T
Q  379 gtcgttgtaattcac-tttatcctaaatcatgcaact 414  Q
    ||| |||||||| || ||||||||||||||| |||||    
T  27008 gtcattgtaatttacttttatcctaaatcatacaact 26972  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 370
Target Start/End: Original strand, 446937 - 447058
Alignment:
Q  249 tgatgacagagcatcacatgccactttttactatgtttttaatactttt-ctttgtatttcaaaacaaataagatgagagttataggagttgtcaacggt 347  Q
    |||||||||||||||| |||  | ||||| ||||||||||| ||||||| ||||  |||| || |||||||||||||||||   |||| ||||  | | |    
T  446937 tgatgacagagcatcatatgata-tttttgctatgtttttagtacttttcctttacatttgaagacaaataagatgagagtctgaggaattgttgatgat 447035  T
Q  348 ttgaggaacatatcgtattgttt 370  Q
    || |||||||||| |||||||||    
T  447036 tttaggaacatattgtattgttt 447058  T

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