View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17945_low_51 (Length: 202)
Name: NF17945_low_51
Description: NF17945
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17945_low_51 |
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Alignment Details
Target: chr5 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 40042826 - 40042664
Alignment:
| Q |
20 |
accgcttcctacgaggcgttatcggcactagttttggctatgctggactagaaacattagttccaaagttatgcaactttgttaaattgtatttatctaa |
119 |
Q |
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| T |
40042826 |
accgcttcctacgaggcgttatcggcactagttttggctatgctggactagaaacattagttccaaagttatgcaactttgttaaattgtatttatctaa |
40042727 |
T |
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| Q |
120 |
aaactggcaaggtcaagaagagattagtctctaccgctcgacgaaagttcttacatttagcat |
182 |
Q |
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| T |
40042726 |
aaactggcaaggtcaagaagagattagtctctaccgctcgacgaaagttcttacatttagcat |
40042664 |
T |
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