View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17947_high_12 (Length: 323)
Name: NF17947_high_12
Description: NF17947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17947_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 682877 - 683183
Alignment:
| Q |
1 |
aacaataacaacatatacactaatactattagcacctccattactcctaaacagacacaaaaaatcacacacaaaatttccacttcttctactactataa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
682877 |
aacaataacaacatatacactaatactattagcacctccattactcctaaacacacacaaaaaatcacacacaaaatttccacttcttctactactataa |
682976 |
T |
|
| Q |
101 |
ctactacaaaacatttagcaaatatttggagagagattcaagggtgcaacaactgggaaaatcttttaaaccctttacaccctattcttcgcgaagagat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
682977 |
ctactacaaaacatttagcaaatatttggagagagattcaagggtgcaacaactgggaaaatcttttaaaccctttacaccctattcttcgcgaagagat |
683076 |
T |
|
| Q |
201 |
aattcgatatggagagtttgttacatcttcttacaaagcctttgatcttgatacaaactcaaaaagatacttgaattgtaaatatggcaaaaagaatatg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
683077 |
aattcgatatggagagtttgttacatcttcttacaaagcctttgatcttgatacaaactcaaaaagatacttgaattgtaaatatggcaaaaagaatatg |
683176 |
T |
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| Q |
301 |
ttgaaag |
307 |
Q |
| |
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||||||| |
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|
| T |
683177 |
ttgaaag |
683183 |
T |
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