View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17947_high_18 (Length: 251)
Name: NF17947_high_18
Description: NF17947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17947_high_18 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 17 - 243
Target Start/End: Complemental strand, 41821336 - 41821110
Alignment:
| Q |
17 |
ataggatgctttggtttcaatggatccttctctttcttgttcttcttgctctccttttctgcatcttgtttgaattgcataaactgttcaagcaattcca |
116 |
Q |
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| T |
41821336 |
ataggatgctttggtttcaatggatccttctctttcttgttcttcttgctctccttttctgcatcttgtttgaattgcataaactgttcaagcaattcca |
41821237 |
T |
|
| Q |
117 |
tagcagtcttctgcttctgttcctcttctaagagtttcattgcctcaatttcacgtttttcctttgtaattacttgcaaataagcctctttttcagcttg |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41821236 |
tagcagtcttctgcttctgttcctcttctaagagtttcattgcctcaatttcacgtttttcctttgtaattacttgcaaataagcctctttttcagcttg |
41821137 |
T |
|
| Q |
217 |
gtatttctcctcataaggcttcttctc |
243 |
Q |
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||||||||||||||||||||||||||| |
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| T |
41821136 |
gtatttctcctcataaggcttcttctc |
41821110 |
T |
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