View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17947_low_21 (Length: 250)

Name: NF17947_low_21
Description: NF17947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17947_low_21
NF17947_low_21
[»] scaffold0756 (1 HSPs)
scaffold0756 (9-250)||(4445-4687)
[»] chr1 (29 HSPs)
chr1 (10-250)||(20106550-20106795)
chr1 (82-250)||(26612496-26612665)
chr1 (87-243)||(14781313-14781470)
chr1 (82-232)||(21666320-21666471)
chr1 (82-250)||(16916387-16916556)
chr1 (82-243)||(21985452-21985612)
chr1 (89-250)||(18735690-18735851)
chr1 (82-243)||(21334209-21334371)
chr1 (87-243)||(15159962-15160119)
chr1 (94-232)||(18528697-18528834)
chr1 (82-250)||(24054457-24054627)
chr1 (98-240)||(22623397-22623540)
chr1 (82-250)||(727947-728116)
chr1 (82-241)||(15543468-15543622)
chr1 (82-250)||(25403533-25403700)
chr1 (82-250)||(18830961-18831130)
chr1 (91-250)||(18826144-18826304)
chr1 (87-243)||(29242955-29243111)
chr1 (87-232)||(21449596-21449738)
chr1 (87-232)||(16179522-16179664)
chr1 (82-194)||(14780061-14780172)
chr1 (164-243)||(20147049-20147128)
chr1 (90-156)||(24281794-24281860)
chr1 (119-184)||(26021283-26021346)
chr1 (87-156)||(22664678-22664747)
chr1 (87-151)||(16112254-16112319)
chr1 (111-184)||(31235445-31235516)
chr1 (121-157)||(25960679-25960715)
chr1 (120-148)||(51472766-51472794)
[»] chr5 (22 HSPs)
chr5 (82-243)||(19008004-19008166)
chr5 (90-248)||(20549160-20549319)
chr5 (93-250)||(20859148-20859306)
chr5 (82-243)||(34129082-34129244)
chr5 (82-250)||(24659467-24659636)
chr5 (82-250)||(20314937-20315106)
chr5 (82-249)||(24140924-24141092)
chr5 (82-243)||(20563577-20563739)
chr5 (82-250)||(16523010-16523183)
chr5 (100-250)||(28665271-28665419)
chr5 (82-222)||(19051846-19051986)
chr5 (82-230)||(24243475-24243622)
chr5 (87-184)||(17432330-17432426)
chr5 (87-158)||(25401847-25401918)
chr5 (87-151)||(18207784-18207848)
chr5 (91-151)||(23336066-23336126)
chr5 (87-153)||(24264987-24265053)
chr5 (87-153)||(24341618-24341684)
chr5 (88-157)||(22620082-22620151)
chr5 (90-150)||(34488153-34488213)
chr5 (93-145)||(15375480-15375532)
chr5 (154-222)||(23338198-23338266)
[»] chr4 (15 HSPs)
chr4 (82-250)||(17025797-17025966)
chr4 (88-230)||(13692188-13692330)
chr4 (82-250)||(11253191-11253361)
chr4 (99-250)||(25095147-25095298)
chr4 (82-182)||(4615221-4615322)
chr4 (82-209)||(17710197-17710325)
chr4 (82-184)||(7582812-7582913)
chr4 (87-151)||(15165286-15165350)
chr4 (93-180)||(13909379-13909465)
chr4 (82-184)||(24638949-24639048)
chr4 (120-156)||(8969243-8969279)
chr4 (87-146)||(5679723-5679782)
chr4 (82-184)||(17107104-17107204)
chr4 (90-151)||(22357049-22357110)
chr4 (91-151)||(19092820-19092880)
[»] scaffold0671 (1 HSPs)
scaffold0671 (89-249)||(928-1089)
[»] scaffold0034 (1 HSPs)
scaffold0034 (82-250)||(76896-77065)
[»] chr2 (26 HSPs)
chr2 (82-250)||(25530986-25531155)
chr2 (82-243)||(25535752-25535914)
chr2 (82-243)||(25536046-25536208)
chr2 (90-236)||(26667795-26667942)
chr2 (82-250)||(25536340-25536509)
chr2 (88-250)||(29143401-29143562)
chr2 (111-243)||(25921091-25921224)
chr2 (82-232)||(17635280-17635431)
chr2 (90-241)||(30412118-30412266)
chr2 (90-243)||(17198356-17198509)
chr2 (87-232)||(18121723-18121869)
chr2 (82-227)||(17675139-17675285)
chr2 (91-215)||(27908642-27908766)
chr2 (82-235)||(24090393-24090546)
chr2 (82-250)||(22378972-22379130)
chr2 (87-243)||(12950485-12950636)
chr2 (82-232)||(27541350-27541497)
chr2 (82-194)||(17349862-17349972)
chr2 (87-157)||(15339759-15339829)
chr2 (82-183)||(17743033-17743133)
chr2 (82-153)||(9761963-9762033)
chr2 (87-153)||(23933168-23933234)
chr2 (90-232)||(25887341-25887479)
chr2 (122-151)||(22568138-22568167)
chr2 (82-146)||(28929156-28929220)
chr2 (120-156)||(25884974-25885010)
[»] chr7 (32 HSPs)
chr7 (82-249)||(22066686-22066854)
chr7 (82-236)||(17190668-17190823)
chr7 (82-250)||(4449446-4449615)
chr7 (82-250)||(11803513-11803682)
chr7 (82-250)||(13288865-13289033)
chr7 (99-243)||(16058368-16058513)
chr7 (82-232)||(8053567-8053716)
chr7 (120-241)||(13277985-13278107)
chr7 (82-244)||(17077554-17077715)
chr7 (87-222)||(1847758-1847893)
chr7 (87-250)||(1861408-1861572)
chr7 (87-243)||(20582706-20582863)
chr7 (82-222)||(39272620-39272760)
chr7 (82-232)||(13759403-13759552)
chr7 (82-160)||(18368555-18368633)
chr7 (82-160)||(8877866-8877944)
chr7 (82-184)||(10941975-10942075)
chr7 (82-156)||(12329875-12329948)
chr7 (90-184)||(4786320-4786412)
chr7 (120-180)||(6043002-6043062)
chr7 (82-148)||(2348446-2348512)
chr7 (120-184)||(8978489-8978552)
chr7 (87-153)||(9574910-9574976)
chr7 (90-151)||(4819364-4819425)
chr7 (120-156)||(3190573-3190609)
chr7 (91-151)||(9131422-9131482)
chr7 (87-151)||(16297358-16297422)
chr7 (87-146)||(3735113-3735172)
chr7 (87-144)||(9731182-9731239)
chr7 (87-143)||(8313012-8313068)
chr7 (120-156)||(10586448-10586484)
chr7 (171-243)||(18366378-18366450)
[»] chr8 (21 HSPs)
chr8 (82-248)||(17997000-17997167)
chr8 (82-250)||(23892652-23892821)
chr8 (82-241)||(24723085-24723245)
chr8 (89-250)||(26831809-26831971)
chr8 (90-237)||(19264530-19264678)
chr8 (87-249)||(18569343-18569506)
chr8 (87-232)||(18448043-18448192)
chr8 (89-232)||(25226585-25226727)
chr8 (122-232)||(17101444-17101553)
chr8 (90-232)||(24110177-24110318)
chr8 (133-244)||(26887330-26887442)
chr8 (82-232)||(29381800-29381947)
chr8 (82-243)||(17509682-17509844)
chr8 (82-232)||(24113791-24113940)
chr8 (90-156)||(25181975-25182041)
chr8 (88-183)||(13314481-13314574)
chr8 (121-243)||(27659881-27659998)
chr8 (87-153)||(14528611-14528677)
chr8 (82-184)||(21315137-21315236)
chr8 (95-159)||(19787249-19787313)
chr8 (87-151)||(26394217-26394280)
[»] chr3 (17 HSPs)
chr3 (87-248)||(19575679-19575841)
chr3 (87-250)||(8170343-8170507)
chr3 (100-249)||(4657532-4657682)
chr3 (89-243)||(8882578-8882733)
chr3 (82-243)||(16229478-16229629)
chr3 (82-228)||(19167887-19168032)
chr3 (134-243)||(19532395-19532505)
chr3 (87-179)||(12411595-12411687)
chr3 (90-159)||(16245237-16245306)
chr3 (102-166)||(20023078-20023142)
chr3 (87-232)||(21302435-21302575)
chr3 (87-184)||(19171349-19171444)
chr3 (120-184)||(41509007-41509069)
chr3 (82-144)||(19908822-19908884)
chr3 (120-156)||(8319604-8319640)
chr3 (122-156)||(8267491-8267525)
chr3 (89-146)||(2167222-2167279)
[»] scaffold0056 (1 HSPs)
scaffold0056 (82-243)||(21755-21917)
[»] chr6 (24 HSPs)
chr6 (82-248)||(20005359-20005525)
chr6 (82-250)||(22813181-22813350)
chr6 (82-232)||(14638066-14638215)
chr6 (82-232)||(17823211-17823360)
chr6 (91-250)||(21841230-21841388)
chr6 (82-242)||(27123996-27124153)
chr6 (89-243)||(22412504-22412659)
chr6 (120-250)||(21846894-21847027)
chr6 (90-232)||(14722451-14722592)
chr6 (82-230)||(23008869-23009016)
chr6 (82-230)||(23779348-23779495)
chr6 (89-228)||(24478791-24478928)
chr6 (89-196)||(11136397-11136505)
chr6 (90-241)||(9517239-9517389)
chr6 (87-222)||(5625155-5625290)
chr6 (92-250)||(17382492-17382651)
chr6 (82-143)||(1635476-1635537)
chr6 (82-184)||(22409818-22409917)
chr6 (91-156)||(21688364-21688429)
chr6 (111-232)||(14072718-14072835)
chr6 (82-156)||(22850010-22850083)
chr6 (87-232)||(20144543-20144684)
chr6 (87-232)||(22188155-22188296)
chr6 (87-156)||(11177451-11177520)
[»] scaffold0035 (1 HSPs)
scaffold0035 (87-241)||(70355-70509)
[»] scaffold1156 (1 HSPs)
scaffold1156 (101-222)||(58-179)
[»] scaffold0263 (1 HSPs)
scaffold0263 (82-232)||(16068-16216)
[»] scaffold0008 (1 HSPs)
scaffold0008 (120-248)||(234672-234800)
[»] scaffold0638 (1 HSPs)
scaffold0638 (82-232)||(261-408)
[»] scaffold0040 (1 HSPs)
scaffold0040 (82-184)||(26325-26426)
[»] scaffold0134 (1 HSPs)
scaffold0134 (87-148)||(11657-11718)
[»] scaffold0103 (1 HSPs)
scaffold0103 (82-184)||(27491-27592)
[»] scaffold0024 (1 HSPs)
scaffold0024 (87-156)||(40101-40170)
[»] scaffold0054 (1 HSPs)
scaffold0054 (87-184)||(72547-72642)
[»] scaffold0111 (1 HSPs)
scaffold0111 (91-232)||(4100-4236)
[»] scaffold0032 (1 HSPs)
scaffold0032 (138-241)||(102840-102942)
[»] scaffold0062 (1 HSPs)
scaffold0062 (120-148)||(42748-42776)


Alignment Details
Target: scaffold0756 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: scaffold0756
Description:

Target: scaffold0756; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 9 - 250
Target Start/End: Complemental strand, 4687 - 4445
Alignment:
Q  9 gaagaatattcgtttgagttggtcccatgttgtgataattcctttaagcagtgcgctagctagtcatttgccctccctaggcaatgaaggccaaggttcc 108  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4687 gaagaatatttgtttgagctggtcccatgttgtgataattcctttaagcagtgcgctagctagtcatttgccctccctaggcaatgaaggccaaggttcc 4588  T
Q  109 cttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgttcaaccctaatttacgtctacc 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4587 cttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagcttacttagtagttctacaaacgttcaaccctaatttacgtctacc 4488  T
Q  208 ttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  4487 ttactaagggtttcaagagaatggtcttattaggttgtagctt 4445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 176; Significance: 6e-95; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 10 - 250
Target Start/End: Original strand, 20106550 - 20106795
Alignment:
Q  10 aagaatattcgtttga---gttggtcccatgttgtgataattcctttaagcagtgcg-ctagctagtcatttgccctccctaggcaatgaaggccaaggt 105  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||    
T  20106550 aagaatattcgtttgatcagttggtcccatgttgtgataattcctttaagcagtgcgtctagctagtcatttgccctacctaggcaatgaagaccaaggt 20106649  T
Q  106 tcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgttcaaccctaatttacgtct 204  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| | ||||||| ||||    
T  20106650 tcccttaggtctatccatctatgaatcttaagacactcatagcacattctctctaagcttacttagtagttctacaaacggtcaatcttaatttatgtct 20106749  T
Q  205 accttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||    
T  20106750 accttactaagggtttcaagaaaatggtcttattaggttgtagctt 20106795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 26612665 - 26612496
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagct-acttagtagttctaca 180  Q
    |||| |||||||||| ||||||||||||||||||||| |||||||||||||| || |||||||||||||| | |||||||||| ||||||||||||||||    
T  26612665 tcccaaggcaatgaaagccaaggttcccttaggtctgcccatctatgaatctcagaacactcatagcacactttctctaagcttacttagtagttctaca 26612566  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||  || ||||||| ||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  26612565 aacgagcagccctaatctacgtctaccttactaagggtttcaagagaatggtcttactaggttatagctt 26612496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 87 - 243
Target Start/End: Complemental strand, 14781470 - 14781313
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgt 185  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||| |||| |     
T  14781470 aggcaatgaaggccaaggttctcttaggtcttcccatctatgaatcttaggacactcatagcacactctctctaaacttacttagtagttcttcaaaagg 14781371  T
Q  186 tcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
     || ||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  14781370 gcagccctaatctacgtctaccttactaagggtttcaagagaatggtcttactaggtt 14781313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 21666471 - 21666320
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| ||||||||||||| |||||||||| | ||||| |||||||||||||||||||||||||||||||| |||||||| || | |||||||||||||||    
T  21666471 tcccaaggcaatgaaggcgaaggttccctcatgtctgcccatctatgaatcttaggacactcatagcacactctctctacgctttcttagtagttctaca 21666372  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    ||||  |||||||||| ||||||||||||||||||||||| |||||||||||    
T  21666371 aacgggcaaccctaatctacgtctaccttactaagggtttcaagagaatggt 21666320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 16916556 - 16916387
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagct-acttagtagttctaca 180  Q
    |||| ||||||||||| | | || ||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||| ||||||||||||||||    
T  16916556 tcccaaggcaatgaagacaagggatcccttaggtctgtccatctatgaatcttaggacattcatatcacactctctctaagcttacttagtagttctaca 16916457  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||  |||||||||| || ||||| |||||||| ||||| ||||||||||||||| |||||| ||||||    
T  16916456 aacgggcaaccctaatctatgtctatcttactaatggtttcaagagaatggtcttactaggttatagctt 16916387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 82 - 243
Target Start/End: Complemental strand, 21985612 - 21985452
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| | |  ||||| |||||||||    
T  21985612 tcccaaggcaatgaaggtcaaggttcccttaggtctgcccatctatgaatcttaggacacttatagcacactctctctacg-ttgttagttgttctacaa 21985514  T
Q  182 acgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
    |||  || ||||||| ||| ||||||||||||||||||| |||||||||||  |||||||||    
T  21985513 acgagcagccctaatctacttctaccttactaagggtttcaagagaatggttctattaggtt 21985452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 89 - 250
Target Start/End: Complemental strand, 18735851 - 18735690
Alignment:
Q  89 gcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgttc 187  Q
    ||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||| |||||||| || | |||||||||| ||||||||       
T  18735851 gcaatgaaggccaaggttcccttagttatgcccatctatgaatcttaggacactcatagcacactctctctacgctttcttagtagttttacaaacg-aa 18735753  T
Q  188 aaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    | ||||||| ||||||||||| ||||||||||| |||||||||||  ||||||||| ||||||    
T  18735752 agccctaatctacgtctacctgactaagggtttcaagagaatggttatattaggttatagctt 18735690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 243
Target Start/End: Complemental strand, 21334371 - 21334209
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||| |||| |||||||| || | || |||| |||||||    
T  21334371 tcccaaggcaatgaaggccaaggttcccttaggtcttcccatctatgaatcttaggacagtcataccacactctctctacgcttgctcagtacttctaca 21334272  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
    ||||  |||||||||| |||||||||||| | |||||||| |||||||||||  |||||||||    
T  21334271 aacgggcaaccctaatctacgtctaccttcccaagggtttcaagagaatggttatattaggtt 21334209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 87 - 243
Target Start/End: Complemental strand, 15160119 - 15159962
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagcta-cttagtagttctacaaacgt 185  Q
    ||||||||||||| |||||||||||||||||| | || ||||||| ||||||||||||||||| ||| |||||| |||  |||||||||||||||||||     
T  15160119 aggcaatgaaggctaaggttcccttaggtctgcctatatatgaatgttaggacactcatagcatattatctctacgcttgcttagtagttctacaaacgg 15160020  T
Q  186 tcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
     ||||| |||| |||||||| |||||||||||||| |||||||||||  |||||||||    
T  15160019 acaaccttaatctacgtctatcttactaagggtttcaagagaatggttatattaggtt 15159962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 94 - 232
Target Start/End: Complemental strand, 18528834 - 18528697
Alignment:
Q  94 gaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgttcaaccct 193  Q
    ||||||||| ||||||||||||||  |||| |||||||||||||||||||||||||||  ||||||| | | |||||||||||||||||||  |||||||    
T  18528834 gaaggccaaagttcccttaggtctaaccatatatgaatcttaggacactcatagcacaccctctctacgtt-cttagtagttctacaaacgggcaaccct 18528736  T
Q  194 aatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    ||| |||||||||| |||||||||||| |||||||||||    
T  18528735 aatctacgtctaccatactaagggtttcaagagaatggt 18528697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 24054457 - 24054627
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||| ||||||||||||| || ||  |||| |||||||||||||||||||||||||| |||||| | || |||||||||||||||||    
T  24054457 tcccaaggcaatgaaggtcaaggttcccttaagtatgctcatcaatgaatcttaggacactcatagcacactctctccacgcttacttagtagttctaca 24054556  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaaga-gaatggtcttattaggttgtagctt 250  Q
    ||||  || ||||||| ||||||||||||||||||| ||| ||||  |||||||||| |||||| ||||||    
T  24054557 aacgggcagccctaatctacgtctaccttactaaggatttcaagataaatggtcttactaggttatagctt 24054627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 98 - 240
Target Start/End: Original strand, 22623397 - 22623540
Alignment:
Q  98 gccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctcta-agctacttagtagttctacaaacgttcaaccctaat 196  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||| | |||||| |  | ||||||||||||||||||   || |||||||    
T  22623397 gccaaggttcccttaagtctgcccatctatgaatcttaggacactcatagcacactatctctacactttcttagtagttctacaaacagacagccctaat 22623496  T
Q  197 ttacgtctaccttactaagggtttaaagagaatggtcttattag 240  Q
     || ||||||||||| ||||||||||||||||||||||| ||||    
T  22623497 ctatgtctaccttacaaagggtttaaagagaatggtcttgttag 22623540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 727947 - 728116
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||| |||||||||||||||| || ||||||||||| |||||| |||||||| |||| |||||||| || |||||| ||||||||||    
T  727947 tcccaaggcaatgaaggtcaaggttcccttaggtttgcccatctatgaaccttagggcactcataacacactctctctacgcttacttaatagttctaca 728046  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    |||   |||||||||  ||||||||||||||| ||||||| || ||||||||  ||| ||||| ||||||    
T  728047 aacaggcaaccctaacctacgtctaccttactgagggtttcaaaagaatggttctatcaggttatagctt 728116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 241
Target Start/End: Complemental strand, 15543622 - 15543468
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||  ||||||     |||||||||||||||||    
T  15543622 tcccaaggcaatgaaggccaaggttccattaagtctgcccatctatgaatcttaggacacttatagcacaccctctct----cacttagtagttctacaa 15543527  T
Q  182 acgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattagg 241  Q
    ||    | ||||||||||||||||||||||  ||||||| ||||||||||| ||||||||    
T  15543526 acagatagccctaatttacgtctaccttaccgagggttt-aagagaatggttttattagg 15543468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 25403700 - 25403533
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctactt-agtagttctaca 180  Q
    |||| |||||||||| ||||| ||||||| ||||||  ||||||||||||||||||||| |||||||||  |||||||| |||  || ||||||||||||    
T  25403700 tcccaaggcaatgaatgccaaagttccctcaggtctacccatctatgaatcttaggacattcatagcac--tctctctatgcttttttagtagttctaca 25403603  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||  |||||||||| || ||||||||||||| |||||| |||| ||||||  ||||||||| ||||||    
T  25403602 aacgggcaaccctaatctatgtctaccttactacgggtttcaagataatggttctattaggttatagctt 25403533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 18830961 - 18831130
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||||||||||  |||||||||||  ||||||||||||| |||||||||||||||||  ||||||  || | |||||||||||||||    
T  18830961 tcccaaggcaatgaaggccaaggtaaccttaggtctgcacatctatgaatctaaggacactcatagcacaccctctctccgctttcttagtagttctaca 18831060  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||   |  | |||| |||||||| |||||||||||||  ||||||||||| |||||||||| ||||||    
T  18831061 aacgggaagtcgtaatctacgtctaacttactaagggttccaagagaatggtgttattaggttatagctt 18831130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 91 - 250
Target Start/End: Original strand, 18826144 - 18826304
Alignment:
Q  91 aatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagcta-cttagtagttctacaaacgttcaa 189  Q
    |||||||||||| ||||||||||| |   |||||||| ||||||||||||||||||||| | ||| |||| |||  ||||||| || |||||||   ||     
T  18826144 aatgaaggccaacgttcccttaggacaacccatctataaatcttaggacactcatagcatactctttctacgctttcttagtatttatacaaacaggcag 18826243  T
Q  190 ccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||||| || |||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  18826244 ccctaatctaagtctaccttactaagggtttcaagagaatggtcttattaggttatagctt 18826304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 87 - 243
Target Start/End: Original strand, 29242955 - 29243111
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctcta-agctacttagtagttctacaaacgt 185  Q
    |||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| ||| |||| | |||||| |  | |||| |||||||| |||||     
T  29242955 aggcaatgaaagccaaggttcccttaggtctacccatctatgaatcttaggacact-atatcacactatctctacaatttcttattagttctagaaacga 29243053  T
Q  186 tcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
     ||  |||||| ||| ||||||||||||||||||| |||||||||||  |||||||||    
T  29243054 gcagtcctaatctacatctaccttactaagggttttaagagaatggttctattaggtt 29243111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 232
Target Start/End: Original strand, 21449596 - 21449738
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgtt 186  Q
    ||||||||||||| ||||||||||||||||    |||||||||||||||||||||||||||||||  ||||||| ||| | |||||||| ||||||||      
T  21449596 aggcaatgaaggctaaggttcccttaggtcgacacatctatgaatcttaggacactcatagcacaccctctctacgct-cctagtagttttacaaacggg 21449694  T
Q  187 caaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    || |||||  |  |||||||||||||||| |||| |||||||||||    
T  21449695 catcccta--tctcgtctaccttactaagagttttaagagaatggt 21449738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 232
Target Start/End: Original strand, 16179522 - 16179664
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgtt 186  Q
    ||||||||||||||||| |||| |||| || | ||||||||||||||||||||||  ||||||||  ||||||| ||| | |||||||||||||||||      
T  16179522 aggcaatgaaggccaagattccattagttcagcccatctatgaatcttaggacacgtatagcacaccctctctacgct-cctagtagttctacaaacggg 16179620  T
Q  187 caaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    |  || ||  |  |||||||||||||||| |||| |||||||||||    
T  16179621 ctgcctta--tctcgtctaccttactaagagtttcaagagaatggt 16179664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 14780061 - 14780172
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| |||||||||||||||| |||| | ||||||   ||||||||||||||||| ||||||||||||||  |||||||  || | ||||||||||| ||    
T  14780061 tcccaaggcaatgaaggccaaagttctcataggtcgacccatctatgaatcttagaacactcatagcacaccctctctactct-cctagtagttctataa 14780159  T
Q  182 acgttcaacccta 194  Q
    |||  ||||||||    
T  14780160 acgggcaacccta 14780172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 20147049 - 20147128
Alignment:
Q  164 tacttagtagttctacaaacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
    |||||||||||||||||||||  || ||||||| ||| |||| ||||||| |||||| |||||||||||  |||||||||    
T  20147049 tacttagtagttctacaaacgggcagccctaatctacatctaacttactacgggtttcaagagaatggttctattaggtt 20147128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 24281794 - 24281860
Alignment:
Q  90 caatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctc 156  Q
    ||||||||||||| ||||||  ||||||  |||||||||||| |||||||||||||| |||||||||    
T  24281794 caatgaaggccaatgttcccgaaggtcttcccatctatgaattttaggacactcataacacattctc 24281860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 26021283 - 26021346
Alignment:
Q  119 tccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacg 184  Q
    |||||||||||||||||||||||||||| |||| ||||||| | || |||||||||||||||||||    
T  26021283 tccatctatgaatcttaggacactcataacacactctctct-atct-cttagtagttctacaaacg 26021346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 22664678 - 22664747
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctc 156  Q
    |||||||||||||||| ||||   |||||||  |||  ||||||||||||||||||||||||||| ||||    
T  22664678 aggcaatgaaggccaatgttcatgtaggtctacccacgtatgaatcttaggacactcatagcacactctc 22664747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 16112254 - 16112319
Alignment:
Q  87 aggcaatgaaggccaaggttccctta-ggtctgtccatctatgaatcttaggacactcatagcaca 151  Q
    ||||||| |||||||| |||| || | |||||  |||||||||||||||||||||||| |||||||    
T  16112254 aggcaataaaggccaacgttctctgaaggtcttaccatctatgaatcttaggacactcttagcaca 16112319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 31235516 - 31235445
Alignment:
Q  111 taggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacg 184  Q
    |||||| | ||||||| ||||||||||||||||| || ||| |||||||  || ||||||||||||||||||||    
T  31235516 taggtcagcccatctacgaatcttaggacactcacagtacactctctct-tgc-acttagtagttctacaaacg 31235445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 25960715 - 25960679
Alignment:
Q  121 catctatgaatcttaggacactcatagcacattctct 157  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  25960715 catctatgaatcttacgacactcatagcacaatctct 25960679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 148
Target Start/End: Complemental strand, 51472794 - 51472766
Alignment:
Q  120 ccatctatgaatcttaggacactcatagc 148  Q
    |||||||||||||||||||||||||||||    
T  51472794 ccatctatgaatcttaggacactcatagc 51472766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 4e-56; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 82 - 243
Target Start/End: Complemental strand, 19008166 - 19008004
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||| || |||| |||||||||    
T  19008166 tcccaaggcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacactcatagcacacactctctaagcttaattagcagttctaca 19008067  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
    ||||  |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  19008066 aacgggcaaccctaatctacgtctaccttactaagggtttcaagagaatggtcttactaggtt 19008004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 90 - 248
Target Start/End: Complemental strand, 20549319 - 20549160
Alignment:
Q  90 caatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgttca 188  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||  ||    
T  20549319 caatgaaggccaaggttcccttaggtcttcccatctatgaatcttaggacactcatagcacactctctctacgcttacttagtagttctacaaacggaca 20549220  T
Q  189 accctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagc 248  Q
    |||||||| ||||||||||||||||| ||||| || |||||||||||| |||||| ||||    
T  20549219 accctaatctacgtctaccttactaaaggtttcaaaagaatggtcttactaggttatagc 20549160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 93 - 250
Target Start/End: Original strand, 20859148 - 20859306
Alignment:
Q  93 tgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgttcaacc 191  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||  || ||    
T  20859148 tgaaggctaaggttcccttaggtctgtccatctttgaatcttaggacactcatagcacactctctctaagcttacttagtagttctacaaacgggcagcc 20859247  T
Q  192 ctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||| ||||||||||||||||| ||||| |||| |||||||||| |||||| ||||||    
T  20859248 ctaatctacgtctaccttactaaaggtttcaagataatggtcttactaggttatagctt 20859306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 82 - 243
Target Start/End: Original strand, 34129082 - 34129244
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| | ||||||||| |  ||||||||||||||    
T  34129082 tcccaaggcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacacttatagcacactatctctaagcttttttagtagttctaca 34129181  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
    ||||   ||||||||| ||||||||||| ||||||||||| ||||||||| | ||||||||||    
T  34129182 aacggaaaaccctaatctacgtctacctaactaagggtttcaagagaatgattttattaggtt 34129244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 24659636 - 24659467
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||| || | |||| ||||||||||    
T  24659636 tcccaaggcaatgaaggacaaggttcccttaggtgtgcccatctatgaatcttaggacactcatagcacactctctctacgctttcttaatagttctaca 24659537  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||  || ||||||| |||||||||||||| |||||||| |||||||||||  ||||||||| ||||||    
T  24659536 aacgggcatccctaatctacgtctaccttaccaagggtttcaagagaatggttctattaggttatagctt 24659467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 20315106 - 20314937
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||| |||| ||||| || || |||||||||||||||||    
T  20315106 tcccaaggcaatgaaggccaatgttcccttaggtctgcccatctatgaatcctaggacactcataacacactctctttatgcttacttagtagttctaca 20315007  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    | ||   ||||||||| ||||||||||||||||||||||| |||||||||||  || |||||| ||||||    
T  20315006 agcgaaaaaccctaatctacgtctaccttactaagggtttcaagagaatggttctactaggttatagctt 20314937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 82 - 249
Target Start/End: Original strand, 24140924 - 24141092
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||| |||| |||||||| || | |||| ||||||||||    
T  24140924 tcccaaggcaatgaaggccaatgttcccttaagtctgcccatatatgaatcttaggacactcataacacactctctctacgctttcttactagttctaca 24141023  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagct 249  Q
    ||||  |||||||||| |||||||||||||||||| |||| |||||||||||  ||||||| |||||||    
T  24141024 aacgggcaaccctaatctacgtctaccttactaagagtttcaagagaatggttctattaggatgtagct 24141092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 82 - 243
Target Start/End: Complemental strand, 20563739 - 20563577
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||||||| ||||||||||||  | |||||| |||||||||||||| |||||||||| |||||||| || | | ||||||||||||     
T  20563739 tcccaaggcaatgaaggccaatgttcccttaggttcgcccatctttgaatcttaggacagtcatagcacactctctctaggctttcctagtagttctacc 20563640  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
    ||||  || ||||||| |||||||||||||||| |||||| ||||||||||||||| ||||||    
T  20563639 aacgggcatccctaatctacgtctaccttactatgggtttcaagagaatggtcttactaggtt 20563577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 16523183 - 16523010
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-----tacttagtagttc 176  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||| ||| | || ||     || ||||||||||    
T  16523183 tcccaaggcaatgaaggccaaggttcccttaggtctgcctatctatgaatcttaggacactcataacacactctatttacgcttaattagttagtagttc 16523084  T
Q  177 tacaaacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    |||||||   ||  |||||| || |||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  16523083 tacaaacaggcagacctaatctatgtctaccttactaagggtttcaagagaatggtcttactaggttatagctt 16523010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 250
Target Start/End: Original strand, 28665271 - 28665419
Alignment:
Q  100 caaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgttcaaccctaattt 198  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||  ||| |||||||| || || ||||||||||||||||||  ||||||| || |    
T  28665271 caaggttcccttaggtctgcccatctatgaatcttatgacactcata--acactctctctacgcttatttagtagttctacaaacg-gcaaccctgatct 28665367  T
Q  199 acgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
     | ||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  28665368 gcatctaccttactaagggtttcaagagaatggtcttactaggttatagctt 28665419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 222
Target Start/End: Original strand, 19051846 - 19051986
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| |||||||||||||||||||||| |||  |  | ||||||||||||| ||||||||| ||||||||  | |||| || |  |||||||||||||||    
T  19051846 tcccaaggcaatgaaggccaaggttccattaatttagcccatctatgaatcctaggacacttatagcacacccgctctcagttttttagtagttctacaa 19051945  T
Q  182 acgttcaaccctaatttacgtctaccttactaagggtttaa 222  Q
    |||  |||||||||| |||||||||||||||||||||||||    
T  19051946 acgggcaaccctaatctacgtctaccttactaagggtttaa 19051986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 82 - 230
Target Start/End: Complemental strand, 24243622 - 24243475
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| |||||| |||| |||||||||||||||| |   ||||||||||||||||||| ||||||||||||| ||||||| ||| ||||| | |  |||||    
T  24243622 tcccaaggcaaggaagtccaaggttcccttaggccgacccatctatgaatcttaggaaactcatagcacatcctctctacgct-cttaggaatcttacaa 24243524  T
Q  182 acgttcaaccctaatttacgtctaccttactaagggtttaaagagaatg 230  Q
    |||  || ||||||| |||||||||||||||||||| ||  ||||||||    
T  24243523 acgagcagccctaatctacgtctaccttactaagggcttcgagagaatg 24243475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 17432330 - 17432426
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacg 184  Q
    ||||||||||||||| |||||| ||||||||  |||||||||||| ||| ||||||||||||||||  |||||| | |  ||||||||||||||||||    
T  17432330 aggcaatgaaggccatggttccattaggtcttcccatctatgaattttacgacactcatagcacatcttctctacg-ttgttagtagttctacaaacg 17432426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 25401918 - 25401847
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctc 158  Q
    |||||||||||||||||| ||   |||||||  ||||||||||||||||||||||||||| |||| ||||||    
T  25401918 aggcaatgaaggccaaggatcatgtaggtctacccatctatgaatcttaggacactcataacacactctctc 25401847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 18207848 - 18207784
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcaca 151  Q
    |||||||||||||||| ||||||  |||| |  || |||||||||||||||||||||||||||||    
T  18207848 aggcaatgaaggccaatgttcccgaaggttttcccgtctatgaatcttaggacactcatagcaca 18207784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 23336066 - 23336126
Alignment:
Q  91 aatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcaca 151  Q
    |||||||||||| |||||  |||||||| ||||||||||||||||||||||| ||| ||||    
T  23336066 aatgaaggccaatgttccagtaggtctggccatctatgaatcttaggacactaatatcaca 23336126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 24265053 - 24264987
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacatt 153  Q
    |||||||||||||||| |||| |  ||||||  |||||||||||| ||| |||||||||||||||||    
T  24265053 aggcaatgaaggccaatgttctcgaaggtcttcccatctatgaatattaagacactcatagcacatt 24264987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 24341684 - 24341618
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacatt 153  Q
    |||||||||||||||| |||| |  ||||||  |||||||||||| ||| |||||||||||||||||    
T  24341684 aggcaatgaaggccaatgttctcgaaggtcttcccatctatgaatattaagacactcatagcacatt 24341618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 22620082 - 22620151
Alignment:
Q  88 ggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctct 157  Q
    ||||||||||| ||| ||||   |||||| |||||||||||||| |||||||||||||| |||| |||||    
T  22620082 ggcaatgaaggtcaatgttcatgtaggtcggtccatctatgaatattaggacactcatatcacactctct 22620151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 150
Target Start/End: Original strand, 34488153 - 34488213
Alignment:
Q  90 caatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcac 150  Q
    ||||||||||||| |||||   ||||||  |||||||||||||||||||||||| ||||||    
T  34488153 caatgaaggccaatgttcctgaaggtcttcccatctatgaatcttaggacactcgtagcac 34488213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 15375532 - 15375480
Alignment:
Q  93 tgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcat 145  Q
    |||||||||| | ||||||||||||  | ||||||||||||||||| ||||||    
T  15375532 tgaaggccaatgatcccttaggtcttcctatctatgaatcttaggaaactcat 15375480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 23338198 - 23338266
Alignment:
Q  154 ctctctaagctacttagtagttctacaaacgttcaaccctaatttacgtctaccttactaagggtttaa 222  Q
    |||||| || ||| |||||||||||||||||   | ||||||| | |||||||||||| ||||||||||    
T  23338198 ctctctcagttacgtagtagttctacaaacgggtagccctaatcttcgtctaccttaccaagggtttaa 23338266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 2e-55; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 17025966 - 17025797
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||| || || |||||||||||||| ||    
T  17025966 tcccaaggcaatgaaggccaaggttctcttaggtctgcccatctatgaatcttaggacactcatagcacactctctttacgcttacttagtagttcttca 17025867  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||| |||||||||| ||| ||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  17025866 aacgtgcaaccctaatctacatctaccttactaagggtttcaagagaatggtcttactaggttatagctt 17025797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 88 - 230
Target Start/End: Complemental strand, 13692330 - 13692188
Alignment:
Q  88 ggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagcta-cttagtagttctacaaacgtt 186  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||| | |||  |||||||||||||||||||      
T  13692330 ggcaatgaaggccaaggttcccttaggtctgaccatctatgaatcttaggaca-taatagcacactctctccacgctttcttagtagttctacaaacggg 13692232  T
Q  187 caaccctaatttacgtctaccttactaagggtttaaagagaatg 230  Q
    |||||||||| ||||||||||||||||||||||| |||||||||    
T  13692231 caaccctaatctacgtctaccttactaagggtttcaagagaatg 13692188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 11253361 - 11253191
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| ||||||||||||||||||||||  |||||||| |||| |||||||||||||||| | ||| |||| | ||||||||| |||||||||||||||||    
T  11253361 tcccaaggcaatgaaggccaaggttcctgtaggtctgcccatatatgaatcttaggacatttataacacactatctctaagcttacttagtagttctaca 11253262  T
Q  181 aacgttcaaccctaatttacgtctaccttactaa-gggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||   | ||||||| || |||||||||||||| |||||| ||||||||||||||| |||||| ||||||    
T  11253261 aacgggaatccctaatctatgtctaccttactaaggggtttcaagagaatggtcttactaggttatagctt 11253191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 250
Target Start/End: Original strand, 25095147 - 25095298
Alignment:
Q  99 ccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgttcaaccctaatt 197  Q
    ||||||||||||||||| |  ||||||||||||||||||||||||||| |||| ||||||||  | || ||||||||||||||||||   | | |||||     
T  25095147 ccaaggttcccttaggttttcccatctatgaatcttaggacactcataacacactctctctatccttatttagtagttctacaaacgggaagctctaatg 25095246  T
Q  198 tacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    |||||||||||||||||| |||| ||||||| ||||||| |||||| ||||||    
T  25095247 tacgtctaccttactaagagtttcaagagaa-ggtcttactaggttatagctt 25095298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 182
Target Start/End: Original strand, 4615221 - 4615322
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||| | ||| |||| || |||||||||||||||||    
T  4615221 tcccaaggcaaggaaggtcaaggttcccttaggtctgcccatctataaatcttaggacactcatagcatactctatctacgcttacttagtagttctaca 4615320  T
Q  181 aa 182  Q
    ||    
T  4615321 aa 4615322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 17710197 - 17710325
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc---tacttagtagttcta 178  Q
    |||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||  ||||  | ||   | |||||||||||||    
T  17710197 tcccaaggcaatgaaggccaaggttcccttaggtctgcccatatatgaatcttaggacactcataacaca--ctctacatgcactttcttagtagttcta 17710294  T
Q  179 caaacgttcaaccctaatttacgtctacctt 209  Q
     |||||  |||||||||| ||||||||||||    
T  17710295 gaaacgggcaaccctaatctacgtctacctt 17710325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 7582812 - 7582913
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| |||||||||||| ||| ||||| |||| ||   |||| |||||||||||||||||||||||||||  ||||||  ||| ||||||||||||||||    
T  7582812 tcccaaggcaatgaaggtcaatgttccattagttcaacccatttatgaatcttaggacactcatagcacaccctctctctgct-cttagtagttctacaa 7582910  T
Q  182 acg 184  Q
    |||    
T  7582911 acg 7582913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 15165286 - 15165350
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcaca 151  Q
    |||||||||||||||||||||| || | || |  |||||||||||||||||||||||||||||||    
T  15165286 aggcaatgaaggccaaggttccatttgttcagcacatctatgaatcttaggacactcatagcaca 15165350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 93 - 180
Target Start/End: Original strand, 13909379 - 13909465
Alignment:
Q  93 tgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctaca 180  Q
    |||||||||| |||||||| | || | | ||||||||||||||||||||||||||||||  ||||||| ||| | |||||||||||||    
T  13909379 tgaaggccaatgttccctttgttcagccaatctatgaatcttaggacactcatagcacaccctctctacgct-catagtagttctaca 13909465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 24639048 - 24638949
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| |||||||||||| ||||||||| ||||||||  |||||||||||| ||||||||||||| || || ||| ||| |   |||||||||||||||||    
T  24639048 tcccaaggcaatgaaggtcaaggttcc-ttaggtctacccatctatgaatattaggacactcattgcgcactctatctca--cacttagtagttctacaa 24638952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 8969279 - 8969243
Alignment:
Q  120 ccatctatgaatcttaggacactcatagcacattctc 156  Q
    |||||| ||||||||||||||||||||||||||||||    
T  8969279 ccatctgtgaatcttaggacactcatagcacattctc 8969243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 5679723 - 5679782
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcata 146  Q
    ||||||| |||||||  ||||||  ||||||  |||||||||||||||||||||||||||    
T  5679723 aggcaataaaggccagtgttcccgaaggtcttcccatctatgaatcttaggacactcata 5679782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 17107104 - 17107204
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| ||||||||||| |||| |||||  |||||| | ||||||| |||| |||||||| ||||||||||  |||||| ||  ||||| ||||| |||||    
T  17107104 tcccaaggcaatgaagaccaatgttccagtaggtcagcccatctacgaatattaggacattcatagcacaccctctctcag--acttaatagttttacaa 17107201  T
Q  182 acg 184  Q
    |||    
T  17107202 acg 17107204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 22357110 - 22357049
Alignment:
Q  90 caatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcaca 151  Q
    ||||||||| ||| ||||   |||||| | ||||||||||||||| ||||||||||||||||    
T  22357110 caatgaaggtcaatgttcttgtaggtcggcccatctatgaatcttgggacactcatagcaca 22357049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 19092820 - 19092880
Alignment:
Q  91 aatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcaca 151  Q
    ||||||| |||| |||||   |||||| |||||||||||||||||||| ||||||| ||||    
T  19092820 aatgaagaccaatgttccggaaggtctttccatctatgaatcttaggaaactcatatcaca 19092880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 928 - 1089
Alignment:
Q  89 gcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgttc 187  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| ||||||||||   |    
T  928 gcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacactcatatcacactctctctaagcttacttagtacttctacaaacaggc 1027  T
Q  188 aaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagct 249  Q
    | ||||||| ||||||||||||||||||||||| ||||||||||||||| |||||| |||||    
T  1028 agccctaatctacgtctaccttactaagggtttcaagagaatggtcttactaggttatagct 1089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 76896 - 77065
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagct-acttagtagttctaca 180  Q
    |||| ||||||||| |  ||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  76896 tcccaaggcaatgaggctcaaggttcccttaggtctgcccatctatgaatcttaggacactcgtagcacactctctctaagcttacttagtagttctaca 76995  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||  || ||||||| ||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  76996 aacgcgcatccctaatctacgtctaccttactaagggtttcaagagaatggtcttactaggttatagctt 77065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 9e-51; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 25530986 - 25531155
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | ||||||||| | ||||| |||||| ||||    
T  25530986 tcccaaggcaatgaaggccaaggttcccttatgtctgaccatctatgaatcttaggacactcatagcatactctctctaaacttacttcgtagttttaca 25531085  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||  || ||||||| ||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  25531086 aacgggcagccctaatctacgtctaccttactaagggtttcaagagaatggtcttactaggttatagctt 25531155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 82 - 243
Target Start/End: Original strand, 25535752 - 25535914
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaag-ctacttagtagttctaca 180  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || || | ||||||||||  |||||||||||||||||    
T  25535752 tcccaaggcaatgaatgccaaggttcccttaggtctgtccatctatgaatcttaggacactcttaacatactctctctaagattacttagtagttctaca 25535851  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
    ||||  || ||||||| ||||||||||||||||||| ||| |||| |||||||||||||||||    
T  25535852 aacgggcagccctaatctacgtctaccttactaaggctttcaagaaaatggtcttattaggtt 25535914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 82 - 243
Target Start/End: Original strand, 25536046 - 25536208
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagct-acttagtagttctaca 180  Q
    |||| ||| |||||| ||||||||||||||| ||||| ||||||||||||||||||| |||||||||| | |||||||||||| |||||||||||||| |    
T  25536046 tcccaagggaatgaaagccaaggttcccttatgtctgcccatctatgaatcttaggatactcatagcatactctctctaagcttacttagtagttctata 25536145  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
    ||||  || ||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  25536146 aacgggcagccctaatctacgtctaccttactaagggttttaagagaatggtcttactaggtt 25536208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 90 - 236
Target Start/End: Original strand, 26667795 - 26667942
Alignment:
Q  90 caatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgttca 188  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||| ||| |||||||| || ||||||||||||||||||||   ||    
T  26667795 caatgaaggccaaggttctcttaggtttgtccatctatggatcttaggacactcatagtacactctctctatgcttacttagtagttctacaaacaggca 26667894  T
Q  189 accctaatttacgtctaccttactaagggtttaaagagaatggtctta 236  Q
    |||||||| |||||||||||||||||||||||  ||||||||||||||    
T  26667895 accctaatctacgtctaccttactaagggttttgagagaatggtctta 26667942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 25536340 - 25536509
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||| |||||||||| | ||||||||||| || ||||||||||||||    
T  25536340 tcccaaggcaatgaaggccaaggttcccttatgtcttcccatctatgaatcttaggatactcatagcatactctctctaagcttagttagtagttctaca 25536439  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
     ||   || ||||||| ||| ||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  25536440 gacaggcagccctaatctacatctaccttactaagggtttcaagagaatggtcttactaggttatagctt 25536509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 88 - 250
Target Start/End: Original strand, 29143401 - 29143562
Alignment:
Q  88 ggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctcta-agctacttagtagttctacaaacgtt 186  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||| |  | |||||||||||||||||||      
T  29143401 ggcaatgaaagccaaggttcccttaggtctgtccatctatgaatcttaggacactcataacaca--ctctctacactttcttagtagttctacaaacgag 29143498  T
Q  187 caaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    |||| ||||| || |||||||||||||| ||||| ||||||||||| |||||||||| ||||||    
T  29143499 caactctaatctatgtctaccttactaaaggtttcaagagaatggttttattaggttatagctt 29143562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 111 - 243
Target Start/End: Original strand, 25921091 - 25921224
Alignment:
Q  111 taggtctgtccatctatgaatcttaggacactcatagcacattctctctaagct-acttagtagttctacaaacgttcaaccctaatttacgtctacctt 209  Q
    |||||||  |||||||||||| |||| |||||||||||||| |||||||||||| ||||||||||||||||||||  || ||||||| ||||||||||||    
T  25921091 taggtcttcccatctatgaattttagaacactcatagcacactctctctaagcttacttagtagttctacaaacgagcagccctaatctacgtctacctt 25921190  T
Q  210 actaagggtttaaagagaatggtcttattaggtt 243  Q
    ||||||||||| ||||||||||||||| ||||||    
T  25921191 actaagggtttcaagagaatggtcttactaggtt 25921224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 17635431 - 17635280
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcaca--ttctctctaagctacttagtagttctac 179  Q
    |||| ||||||||||||||||||||||||||||||   ||||||||||||||||||||| ||||| ||||   |||||||| ||| ||||||||||||||    
T  17635431 tcccaaggcaatgaaggccaaggttcccttaggtcatcccatctatgaatcttaggacaatcataccacactctctctctacgct-cttagtagttctac 17635333  T
Q  180 aaacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    |||||  || ||||||| ||||||||||||||||||||||| |||||| ||||    
T  17635332 aaacgggcagccctaatctacgtctaccttactaagggtttcaagagagtggt 17635280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 30412118 - 30412266
Alignment:
Q  90 caatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgttcaa 189  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||  ||||||| | |  |||| ||||||||||| |  |||    
T  30412118 caatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggatactcataacaca--ctctctatg-tttttagcagttctacaaatggacaa 30412214  T
Q  190 ccctaatttacgtctaccttactaagggtttaaagagaatggtcttattagg 241  Q
    ||||||| ||||||||||||||||||||||| |||||||||||  |||||||    
T  30412215 ccctaatctacgtctaccttactaagggtttcaagagaatggttctattagg 30412266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 243
Target Start/End: Original strand, 17198356 - 17198509
Alignment:
Q  90 caatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgttca 188  Q
    |||||||||||| | ||||||||||  || ||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| | ||||||  ||    
T  17198356 caatgaaggccacgattcccttagggttgcccatctatgaatcttaggacactcataacacactctctctaagcttacttagtagttttgcaaacgggca 17198455  T
Q  189 accctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
     | ||||| ||||||||||||||||||||||| |||||||| |||||| ||||||    
T  17198456 gctctaatctacgtctaccttactaagggtttcaagagaat-gtcttactaggtt 17198509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 232
Target Start/End: Complemental strand, 18121869 - 18121723
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgt 185  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||| || ||||||  |||| |||||||      
T  18121869 aggcaatgaaggccaatgttcccttaggtctgcccatctatgaatcttaggacactcatagcacactctttctacgcttacttaacagttttacaaacag 18121770  T
Q  186 tcaaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
     || | ||||| || |||||||||||||||||||| |||||||||||    
T  18121769 acatctctaatatatgtctaccttactaagggtttcaagagaatggt 18121723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 227
Target Start/End: Complemental strand, 17675285 - 17675139
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctct--aagctacttagtagttctac 179  Q
    |||| |||||||||||||||||||||||||||||| | |||||||||||||||| |||| ||||| |||| |||||||  | ||| | ||||||||||||    
T  17675285 tcccaaggcaatgaaggccaaggttcccttaggtcagcccatctatgaatcttaagacaatcataccacactctctctctacgct-catagtagttctac 17675187  T
Q  180 aaacgttcaaccctaatttacgtctaccttactaagggtttaaagaga 227  Q
    |||||  || ||||||| ||||||||||||||||||||||| ||||||    
T  17675186 aaacgggcagccctaatctacgtctaccttactaagggtttcaagaga 17675139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 27908766 - 27908642
Alignment:
Q  91 aatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgttcaac 190  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||  ||  || |  |||||||| |||||||||| |  ||||    
T  27908766 aatgaaggccaaggttccattaggtcggtccatctatgaatcttaggacactcatagcacacccttcctcacttacttagttgttctacaaatgggcaac 27908667  T
Q  191 cctaatttacgtctaccttactaag 215  Q
    |||||| ||||||||||||||||||    
T  27908666 cctaatctacgtctaccttactaag 27908642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 82 - 235
Target Start/End: Complemental strand, 24090546 - 24090393
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| ||| |||||||||||  ||||||||||||||   ||||||||||||||||||||||||||||||| |||||||| || ||||| |||||||||||    
T  24090546 tcccaaggaaatgaaggccagtgttcccttaggtcttctcatctatgaatcttaggacactcatagcacactctctctacgcttacttggtagttctaca 24090447  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtctt 235  Q
    ||||  || ||||||| |||  |||||||||||| | |||||||| |||||||||    
T  24090446 aacgggcatccctaatatac-actaccttactaaagatttaaagacaatggtctt 24090393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 22379130 - 22378972
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctcta-agctacttagtagttctaca 180  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||           |||||||| |  | |||||||||||||||    
T  22379130 tcccaaggcaatgaaggccaaggttccgttaggtctgcccatctatgaatcttaggacac-----------tctctctacactttcttagtagttctaca 22379042  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||  ||  |||||| ||||||||||||||||||||||| |||| |||||| |||||||||| ||||||    
T  22379041 aacggccagtcctaatctacgtctaccttactaagggtttcaagataatggttttattaggttatagctt 22378972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 243
Target Start/End: Complemental strand, 12950636 - 12950485
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgtt 186  Q
    |||||||||||||||||||||   |||||||  |||||||||||||||||||||||||||||||| |||||||  || ||||| ||||||||||||||      
T  12950636 aggcaatgaaggccaaggttcttgtaggtcttcccatctatgaatcttaggacactcatagcacactctctct-cgc-acttaatagttctacaaacggg 12950539  T
Q  187 caaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
    || |||||  |  |||||||||||| |||||||| |||||||||||  |||||||||    
T  12950538 cagcccta--tctcgtctaccttaccaagggttt-aagagaatggttctattaggtt 12950485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 27541497 - 27541350
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| |||||||||||||||||||||  |||||||   |||||||||||||||||||||||||||| ||| |||||||   || ||||||||||||||||    
T  27541497 tcccaaggcaatgaaggccaaggttctattaggtcgaaccatctatgaatcttaggacactcatagaacactctctctccact-cttagtagttctacaa 27541399  T
Q  182 acgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    | |  ||||||||  |  ||| ||| ||||||||||||| |||||||||||    
T  27541398 atgggcaacccta--tctcgtatactttactaagggttttaagagaatggt 27541350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 17349862 - 17349972
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| ||| ||||||||||||| ||||  ||||||||  |||||| ||||||||||||||||||| ||||  |||||||    |||||||||||||||||    
T  17349862 tcccaaggtaatgaaggccaagattcctgtaggtctgctcatctaggaatcttaggacactcataacaca--ctctctatcgcacttagtagttctacaa 17349959  T
Q  182 acgttcaacccta 194  Q
    |||  ||||||||    
T  17349960 acgggcaacccta 17349972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 15339759 - 15339829
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctct 157  Q
    |||||||||||||||||||||   |||||||  ||||||||||||||||||||||| ||| |||| |||||    
T  15339759 aggcaatgaaggccaaggttcatgtaggtctacccatctatgaatcttaggacacttatatcacactctct 15339829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 183
Target Start/End: Complemental strand, 17743133 - 17743033
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| ||||||||||||  |||||||| |||| || |  ||||||| ||||||||||||||||| |||||  ||||||  ||| ||||||||||||||||    
T  17743133 tcccaaggcaatgaaggttaaggttccattagttcggctcatctataaatcttaggacactcatggcacaccctctctctgct-cttagtagttctacaa 17743035  T
Q  182 ac 183  Q
    ||    
T  17743034 ac 17743033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 9762033 - 9761963
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacatt 153  Q
    |||| |||||||||||| | ||||||| | ||||||  ||||||||||||||||||||||||||||| ||||    
T  9762033 tcccaaggcaatgaaggtcgaggttccat-aggtctacccatctatgaatcttaggacactcatagcgcatt 9761963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 23933234 - 23933168
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacatt 153  Q
    |||||||||| || || ||| ||  ||||||  ||||||||||||||||||||| ||||||||||||    
T  23933234 aggcaatgaaagcgaatgtttccgaaggtcttcccatctatgaatcttaggacaatcatagcacatt 23933168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 232
Target Start/End: Complemental strand, 25887479 - 25887341
Alignment:
Q  90 caatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgttcaa 189  Q
    ||||||||||||| ||||   ||||||| ||||| |||||||| ||| ||||| ||||||||  ||||||  ||| |||||||||||||||||    |||    
T  25887479 caatgaaggccaatgttcatgtaggtctttccatatatgaatcctagaacactaatagcacacactctct-cgct-cttagtagttctacaaatcggcaa 25887382  T
Q  190 ccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    |||| ||   |||||||||||| |||||||| |||||||||||    
T  25887381 ccct-atcagcgtctaccttaccaagggttt-aagagaatggt 25887341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 151
Target Start/End: Original strand, 22568138 - 22568167
Alignment:
Q  122 atctatgaatcttaggacactcatagcaca 151  Q
    ||||||||||||||||||||||||||||||    
T  22568138 atctatgaatcttaggacactcatagcaca 22568167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 28929156 - 28929220
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtct-gtccatctatgaatcttaggacactcata 146  Q
    |||| ||||||||||| |||||||  | |||| ||| |||||||||||||||||||||||||||||    
T  28929156 tcccaaggcaatgaagtccaaggtatcattag-tctagtccatctatgaatcttaggacactcata 28929220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 25885010 - 25884974
Alignment:
Q  120 ccatctatgaatcttaggacactcatagcacattctc 156  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  25885010 ccatctatgaatcttagggcactcatagcacactctc 25884974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 82 - 249
Target Start/End: Complemental strand, 22066854 - 22066686
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| | ||||| |||| ||||||||||||    
T  22066854 tcccaaggcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacactcatagcacactctttataagcttactgagtagttctaca 22066755  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagct 249  Q
    ||||  || || |||| ||||||||||||||||||||||| || |||||||||||| |||||| |||||    
T  22066754 aacgggcagccttaatctacgtctaccttactaagggtttcaaaagaatggtcttactaggttatagct 22066686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 82 - 236
Target Start/End: Complemental strand, 17190823 - 17190668
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||| | || || |||||| |||||||| |    
T  17190823 tcccaaggcaatgaaggtcaaggttcccttaggtctgcccatctatgaatcttatgacactcatagcacactctttatacgcttacttactagttctaga 17190724  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtctta 236  Q
    ||||  |||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  17190723 aacgggcaaccctaatctacgtctaccttactaagggtttcaagagaatggtctta 17190668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 4449446 - 4449615
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  || |||||||| || |||||||||||||||||    
T  4449446 tcccaaggcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacactcatagatcactctctctacgcttacttagtagttctaca 4449545  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||   | ||||| | ||| ||||||||||||| ||||| ||||||||||||||| || ||| ||||||    
T  4449546 aacggagagccctactctacatctaccttactaatggtttcaagagaatggtcttactaagttatagctt 4449615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 82 - 250
Target Start/End: Original strand, 11803513 - 11803682
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||  || || | |||||||||||||||    
T  11803513 tcccaaggcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacactaatagcacactctcgatacgctttcttagtagttctaca 11803612  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||  |||||||||| |||| || ||||||||| ||||| |||||||||||  |||||| || ||||||    
T  11803613 aacggacaaccctaatctacgccttccttactaaaggtttcaagagaatggttctattagattatagctt 11803682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 13289033 - 13288865
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagct-acttagtagttctaca 180  Q
    |||| ||||||||||| |||||||||||||||||||  |||||||  ||||||||||||||| ||||||| |||||||||||| |||  |||||||||||    
T  13289033 tcccaaggcaatgaagtccaaggttcccttaggtcta-ccatctacaaatcttaggacactcgtagcacactctctctaagcttactcggtagttctaca 13288935  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||  ||||| |||| ||||||||||||||||||||||| |||||||||||||||  ||||| ||||||    
T  13288934 aacgggcaaccttaatctacgtctaccttactaagggtttcaagagaatggtcttaccaggttatagctt 13288865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 99 - 243
Target Start/End: Complemental strand, 16058513 - 16058368
Alignment:
Q  99 ccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgttcaaccctaatt 197  Q
    ||||||||||||||||| |  | |||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||  || |||||||     
T  16058513 ccaaggttcccttaggtgtaccaatctatgaatcttaggacactcatagcacactcgctctaagcatacttagtagttctacaaacgggcatccctaatc 16058414  T
Q  198 tacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
    ||| |||||||||||||| |||| ||||||||||||||| ||||||    
T  16058413 tacttctaccttactaagagtttcaagagaatggtcttactaggtt 16058368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 8053716 - 8053567
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| ||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||| |||| ||| | | ||||||||||  | ||    
T  8053716 tcccaaggcaatgaaggccaaggttcccttaggtttgcctatctatgaatcttaggacactcatagcacactctccctacg-ttcttagtagtttaataa 8053618  T
Q  182 acgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    |||  |||||||||| ||||||||||||| ||||||||| |||||||||||    
T  8053617 acggacaaccctaatatacgtctaccttagtaagggtttcaagagaatggt 8053567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 13277985 - 13278107
Alignment:
Q  120 ccatctatgaatcttaggacactcatagcacattctctctaagct-acttagtagttctacaaacgttcaaccctaatttacgtctaccttactaagggt 218  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||  || ||||||| |||||||||||||||||||||    
T  13277985 ccatctttgaatcttaggacactcatagcacactctctctacgcttacttagtagttctacaaacgggcagccctaatctacgtctaccttactaagggt 13278084  T
Q  219 ttaaagagaatggtcttattagg 241  Q
    || || |||||||||||||||||    
T  13278085 ttcaacagaatggtcttattagg 13278107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 82 - 244
Target Start/End: Original strand, 17077554 - 17077715
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| |||||||||||  ||||||||||||||||||| |||||||||||||||| |||||||| |||| | ||| |||| | | ||||||||||||||||    
T  17077554 tcccaaggcaatgaagttcaaggttcccttaggtctgcccatctatgaatcttatgacactcaaagcaaactctatctacgtt-cttagtagttctacaa 17077652  T
Q  182 acgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttg 244  Q
    |||  || ||||||| ||||||||||||| ||||||||| |||||||||||  ||||||||||    
T  17077653 acgggcatccctaatctacgtctaccttagtaagggtttcaagagaatggttctattaggttg 17077715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 87 - 222
Target Start/End: Complemental strand, 1847893 - 1847758
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgtt 186  Q
    |||||||||||||||||||||| |||| || | |||||||||||| ||||||||||||||| |||  |||||| | ||||||||||||||||||||||      
T  1847893 aggcaatgaaggccaaggttccattagatcggcccatctatgaatattaggacactcatagtacaccctctctcacctacttagtagttctacaaacggg 1847794  T
Q  187 caaccctaatttacgtctaccttactaagggtttaa 222  Q
    || ||||||| ||||| |||||||||||||||||||    
T  1847793 cagccctaatctacgtttaccttactaagggtttaa 1847758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 250
Target Start/End: Original strand, 1861408 - 1861572
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgt 185  Q
    ||||||||||||  |||||||||||||||||  ||||||||||||||||||||||| |||||||  ||| |||| || | |||| |||||||||||| |     
T  1861408 aggcaatgaaggtaaaggttcccttaggtcttcccatctatgaatcttaggacacttatagcactctctttctacgctttcttactagttctacaaatgg 1861507  T
Q  186 tcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
     || ||||||| |||||||||||||||||| |||| |||||||||||||| | ||||| ||||||    
T  1861508 gcagccctaatctacgtctaccttactaagagtttcaagagaatggtcttctaaggttatagctt 1861572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 87 - 243
Target Start/End: Original strand, 20582706 - 20582863
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctcta-agctacttagtagttctacaaacgt 185  Q
    |||||||||||| |||||||||||||| |||  ||||| |||||||||| || |||||||||||| |||||||| |  | ||||||||||||||||||      
T  20582706 aggcaatgaaggtcaaggttcccttagatctacccatccatgaatcttatgatactcatagcacactctctctacactttcttagtagttctacaaacag 20582805  T
Q  186 tcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
      ||||||||| ||||||| ||||||||||||||| || ||||||||  |||||||||    
T  20582806 gtaaccctaatctacgtcttccttactaagggtttcaaaagaatggttctattaggtt 20582863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 82 - 222
Target Start/End: Complemental strand, 39272760 - 39272620
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| |||||||||||||||| ||||| ||||||| | |||||||||||||  || ||||||||| ||||  |||| | |  ||||||||||||||||||    
T  39272760 tcccaaggcaatgaaggccaaagttccattaggtcggcccatctatgaatcacagaacactcataacacaccctctgtcacttacttagtagttctacaa 39272661  T
Q  182 acgttcaaccctaatttacgtctaccttactaagggtttaa 222  Q
    |||  |||||||||| | | |||||||||||||||||||||    
T  39272660 acgagcaaccctaatctccatctaccttactaagggtttaa 39272620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 13759552 - 13759403
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtcc-atctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctaca 180  Q
    |||| ||||| ||||||||||||||||||||||| | ||| || ||||||||||||||||||||||| |||   ||| || ||| | || ||||||||||    
T  13759552 tcccaaggcactgaaggccaaggttcccttaggt-tatcctatatatgaatcttaggacactcatagtacaccttctttacgct-catattagttctaca 13759455  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    || |  || ||||||| |||||||||||||||||| |||| |||||||||||    
T  13759454 aatgggcagccctaatctacgtctaccttactaagagtttcaagagaatggt 13759403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 160
Target Start/End: Complemental strand, 18368633 - 18368555
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctcta 160  Q
    |||| ||||||||||||  |||||||||||||||||  |||||||||||||||| ||||||||||||||| ||||||||    
T  18368633 tcccaaggcaatgaaggttaaggttcccttaggtcttcccatctatgaatcttatgacactcatagcacactctctcta 18368555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 8877866 - 8877944
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctcta 160  Q
    |||| ||| |||||||||||||||||||||||||||  | ||||||||||||||||||||||| ||||||  |||||||    
T  8877866 tcccaaggaaatgaaggccaaggttcccttaggtcttccgatctatgaatcttaggacactcaaagcacaccctctcta 8877944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 10942075 - 10941975
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| ||||||||||||||||||||||  || ||||  |||||||| ||||| |||||||||||| |||| |||||||  || |||||||||||||||||    
T  10942075 tcccaaggcaatgaaggccaaggttcctgtatgtctagccatctattaatctcaggacactcataacacactctctct-cgc-acttagtagttctacaa 10941978  T
Q  182 acg 184  Q
    |||    
T  10941977 acg 10941975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 12329875 - 12329948
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctc 156  Q
    |||| |||||||||||||||||||||| ||| |||| |||||||||| |||||||||| ||||||||||| ||||    
T  12329875 tcccgaggcaatgaaggccaaggttcc-ttaagtctatccatctatgcatcttaggaccctcatagcacactctc 12329948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 184
Target Start/End: Original strand, 4786320 - 4786412
Alignment:
Q  90 caatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacg 184  Q
    |||||||||||||||||||  |||||||  |||||||||||||||| |||| |||||||||| ||||||   ||  ||||||||||||||||||||    
T  4786320 caatgaaggccaaggttcctgtaggtctacccatctatgaatcttacgacaatcatagcacactctctc---gcgaacttagtagttctacaaacg 4786412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 6043002 - 6043062
Alignment:
Q  120 ccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctaca 180  Q
    |||||||||||||||||||||||||||||| | ||||||| |  |||||||||||||||||    
T  6043002 ccatctatgaatcttaggacactcatagcatactctctctcacttacttagtagttctaca 6043062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 148
Target Start/End: Complemental strand, 2348512 - 2348446
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagc 148  Q
    |||| ||||||||||||||||||||||  ||||| |   ||||||||||||||||||||||||||||    
T  2348512 tcccaaggcaatgaaggccaaggttcctataggtttactcatctatgaatcttaggacactcatagc 2348446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 8978552 - 8978489
Alignment:
Q  120 ccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacg 184  Q
    |||| ||||||||||| |||||||||||||||  ||||||| ||| |||||||||||||||||||    
T  8978552 ccatttatgaatcttatgacactcatagcacaccctctctatgct-cttagtagttctacaaacg 8978489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 9574910 - 9574976
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacatt 153  Q
    |||||||||||||||| |||| |  ||||||  ||||||||||||||||||||||| ||| ||||||    
T  9574910 aggcaatgaaggccaatgttctcgaaggtcttcccatctatgaatcttaggacacttataacacatt 9574976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 4819364 - 4819425
Alignment:
Q  90 caatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcaca 151  Q
    ||||||||||||||||||   |||||||  ||||||||||||||||||||| ||||| ||||    
T  4819364 caatgaaggccaaggttcttgtaggtctacccatctatgaatcttaggacaatcatatcaca 4819425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 3190609 - 3190573
Alignment:
Q  120 ccatctatgaatcttaggacactcatagcacattctc 156  Q
    |||||||||||||||||||||||||||||||| ||||    
T  3190609 ccatctatgaatcttaggacactcatagcacactctc 3190573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 151
Target Start/End: Original strand, 9131422 - 9131482
Alignment:
Q  91 aatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcaca 151  Q
    |||||||| ||| |||||  |||||||  |||||||| |||||||||||||||||||||||    
T  9131422 aatgaaggtcaatgttcctgtaggtctacccatctataaatcttaggacactcatagcaca 9131482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 16297422 - 16297358
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcaca 151  Q
    |||||||||||||||| |||||   |||  |  ||||||||||||||||||||||||||||||||    
T  16297422 aggcaatgaaggccaatgttcctaaaggatttcccatctatgaatcttaggacactcatagcaca 16297358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 3735113 - 3735172
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcata 146  Q
    |||||||||||||||| ||| ||  ||||||  | |||||||||||||||||||||||||    
T  3735113 aggcaatgaaggccaatgtttccgaaggtcttccgatctatgaatcttaggacactcata 3735172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 9731239 - 9731182
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactca 144  Q
    ||||||||||||||||| |||   |||||||  ||||||||||||||||||| |||||    
T  9731239 aggcaatgaaggccaagtttcttctaggtctacccatctatgaatcttaggatactca 9731182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 8313068 - 8313012
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactc 143  Q
    ||||||||||||| || | ||||  ||||||  ||||||||||||||||||||||||    
T  8313068 aggcaatgaaggctaatgatccccaaggtcttcccatctatgaatcttaggacactc 8313012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 10586484 - 10586448
Alignment:
Q  120 ccatctatgaatcttaggacactcatagcacattctc 156  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  10586484 ccatttatgaatcttaggacactcatagcacactctc 10586448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 18366450 - 18366378
Alignment:
Q  171 tagttctacaaacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
    ||||||||||||||  || | ||| | |||||| |||||||||||||||| ||||| |||||  |||||||||    
T  18366450 tagttctacaaacggacagctctattctacgtccaccttactaagggtttcaagagtatggttctattaggtt 18366378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 1e-49; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 82 - 248
Target Start/End: Original strand, 17997000 - 17997167
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||| |||||||| || |||||||||||||||||    
T  17997000 tcccaaggcaatgaaggccaaggttcccttaagtttgtccatctatgaatcttaggacactcatagtacactctctctacgcttacttagtagttctaca 17997099  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagc 248  Q
    ||||  |||||||||| |  |||||||||||||||||||| |||||||| |||||| |||||| ||||    
T  17997100 aacgggcaaccctaatctttgtctaccttactaagggtttcaagagaatcgtcttactaggttatagc 17997167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 23892821 - 23892652
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||| |    
T  23892821 tcccaaggcaatgaaggccaaggttcccttaggtatgcccatctatgaatcttaggacactcatagcacactctctctacgcttacttagtagttctaaa 23892722  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||  || ||||||| || |||||||||||||||||||| ||||||||  ||| | |||||| ||||||    
T  23892721 aacgggcagccctaatctatgtctaccttactaagggtttcaagagaatcatctaactaggttatagctt 23892652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 82 - 241
Target Start/End: Complemental strand, 24723245 - 24723085
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctac-ttagtagttctaca 180  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||| ||||||||  ||| |||||||||| |||| ||  ||| | ||||||||||||||    
T  24723245 tcccaaggcaatgaagtccaaggttcccttaggtctgcccatctaggaatcttacaacattcatagcacactctccctttgcttccttagtagttctaca 24723146  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattagg 241  Q
    ||||  |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||    
T  24723145 aacggacaaccctaatatacgtctaccttactaagggtttcaagagaatggtcttactagg 24723085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 89 - 250
Target Start/End: Complemental strand, 26831971 - 26831809
Alignment:
Q  89 gcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgttc 187  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||| || | ||||||||||| |||||||||||||||||||||  |    
T  26831971 gcaatgaaagccaaggttcccttaggtctgcctatctatgaatcttaggacactcataacatactctctctaagcttacttagtagttctacaaacgggc 26831872  T
Q  188 aaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    |   ||||| |||||||||||||| || || || |||||| ||||||||||||||| ||||||    
T  26831871 agatctaatctacgtctaccttaccaatggattcaagagagtggtcttattaggttatagctt 26831809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 90 - 237
Target Start/End: Original strand, 19264530 - 19264678
Alignment:
Q  90 caatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgttca 188  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||  |||||||| || ||||||||||||| | |||||  ||    
T  19264530 caatgaaggccaaggttcccttaggtctgcccatctatgaatcttaagacactcatagaactctctctctacgcttacttagtagttcaataaacgggca 19264629  T
Q  189 accctaatttacgtctaccttactaagggtttaaagagaatggtcttat 237  Q
     || |||| || |||||||||||||||||||| ||||||||||| ||||    
T  19264630 gccataatctatgtctaccttactaagggtttcaagagaatggttttat 19264678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 87 - 249
Target Start/End: Original strand, 18569343 - 18569506
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgt 185  Q
    ||||||||||||||||||||||||||||| |  ||||||||||||| |||||||||||||| ||| ||||||||| | ||||||||||||||||||||      
T  18569343 aggcaatgaaggccaaggttcccttaggtattcccatctatgaatcataggacactcatagtacactctctctaatcttacttagtagttctacaaacaa 18569442  T
Q  186 tcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagct 249  Q
      | || |||  |||||||||||||||| |||||| ||||||||||| ||| |||||| |||||    
T  18569443 gtagccgtaacctacgtctaccttactacgggtttcaagagaatggttttactaggttatagct 18569506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 232
Target Start/End: Complemental strand, 18448192 - 18448043
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaa--- 182  Q
    ||||||||||||||||||||||||||| |||  ||||| | ||||||||||||||||||| |||| |||||||  || | |||||||||||||||||       
T  18448192 aggcaatgaaggccaaggttcccttagttcttcccatcgaggaatcttaggacactcatatcacactctctctgcgcttgcttagtagttctacaaacgg 18448093  T
Q  183 cgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    ||  || ||||||| ||| ||||||||||||||||||| |||||||||||    
T  18448092 cgggcagccctaatctacatctaccttactaagggtttcaagagaatggt 18448043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 25226585 - 25226727
Alignment:
Q  89 gcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgttca 188  Q
    |||||||| | |||||||||||||  |||  |||||||||||||||||||||||||| |||||  |||| || ||| |||||||||| ||||||    ||    
T  25226585 gcaatgaaagtcaaggttcccttaattcttcccatctatgaatcttaggacactcattgcacaccctctttacgct-cttagtagttttacaaataggca 25226683  T
Q  189 accctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    |||||||| |||||||||||||||||||||||||||| ||||||    
T  25226684 accctaatctacgtctaccttactaagggtttaaagataatggt 25226727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 232
Target Start/End: Complemental strand, 17101553 - 17101444
Alignment:
Q  122 atctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgttcaaccctaatttacgtctaccttactaagggttta 221  Q
    |||||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| |  || ||||||| |||||||||||||| ||||||||     
T  17101553 atctatgaatcttaggacactcatagcacactctctctacgtt-cttagtagttctacaaatgggcatccctaatctacgtctaccttacaaagggtttc 17101455  T
Q  222 aagagaatggt 232  Q
    |||||||||||    
T  17101454 aagagaatggt 17101444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 90 - 232
Target Start/End: Complemental strand, 24110318 - 24110177
Alignment:
Q  90 caatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgttcaa 189  Q
    |||||||| |||||||||| |||||||    |||||||||||||||||||||||||||||||  ||||||| |||  ||| ||||  |||||||| |||     
T  24110318 caatgaagtccaaggttccattaggtcaacacatctatgaatcttaggacactcatagcacaccctctctacgctt-ttattagtaatacaaacggtcat 24110220  T
Q  190 ccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    ||||||| |||||| ||||||| |||||||| |||||||||||    
T  24110219 ccctaatctacgtcgaccttacaaagggtttcaagagaatggt 24110177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 133 - 244
Target Start/End: Original strand, 26887330 - 26887442
Alignment:
Q  133 ttaggacactcatagcacattctctctaagcta-cttagtagttctacaaacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatgg 231  Q
    ||||||||||||||||||| ||||| || |||  |||||||||||||||||||  || ||||||| |||||| |||||||||||||||| ||||||||||    
T  26887330 ttaggacactcatagcacactctctttacgctttcttagtagttctacaaacgagcagccctaatctacgtccaccttactaagggtttcaagagaatgg 26887429  T
Q  232 tcttattaggttg 244  Q
    |  ||||||||||    
T  26887430 ttctattaggttg 26887442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 29381947 - 29381800
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| ||| |||||||||||||||||| || | || | | ||||||||||||||||||||||||| ||||   |||||  ||| ||||||||||||||||    
T  29381947 tcccaaggaaatgaaggccaaggttccatttgttcagccaatctatgaatcttaggacactcataacacaccatctctccgct-cttagtagttctacaa 29381849  T
Q  182 acgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    ||  ||||| |||  |  ||||||||||||||| ||||| |||||||||||    
T  29381848 acagtcaactcta--tctcgtctaccttactaatggttttaagagaatggt 29381800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 243
Target Start/End: Original strand, 17509682 - 17509844
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagcta-cttagtagttctaca 180  Q
    |||| |||||||||||| ||||||||||||||||||  |||||||||||  |||||  ||||||| || | ||| | ||  ||  ||||||| ||||||     
T  17509682 tcccaaggcaatgaaggtcaaggttcccttaggtcttcccatctatgaaagttaggttactcataacatactctttgtaccctttcttagtaattctact 17509781  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
    ||||   | ||| ||| ||||||||||||||||||||||| |||||||||||  |||||||||    
T  17509782 aacgagtagcccaaatctacgtctaccttactaagggtttcaagagaatggttctattaggtt 17509844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 24113940 - 24113791
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| |||||||||||| ||| |||||  || ||| ||||||||||||| |||||||||||||||||||   ||||||| ||| |||||||||| |||||    
T  24113940 tcccaaggcaatgaaggtcaatgttccaataagtcagtccatctatgaagcttaggacactcatagcactccctctctacgct-cttagtagttatacaa 24113842  T
Q  182 acgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    |     | ||||||| ||||| ||||||| ||||||||| || ||||||||    
T  24113841 ataggtagccctaatctacgtttaccttaataagggtttcaaaagaatggt 24113791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 25182041 - 25181975
Alignment:
Q  90 caatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctc 156  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||||||| ||| |||| ||||    
T  25182041 caatgaaggccaatgttccattaggtcagtccatctatgaatcttaggacactaataacacactctc 25181975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 183
Target Start/End: Complemental strand, 13314574 - 13314481
Alignment:
Q  88 ggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaac 183  Q
    |||||||||||  ||||||||  ||||| || | |||||||||||||||||||||||||||||| |||||||    | ||||||||||||||||||    
T  13314574 ggcaatgaaggttaaggttcctgtaggtttgcctatctatgaatcttaggacactcatagcacactctctct--cgttcttagtagttctacaaac 13314481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 243
Target Start/End: Original strand, 27659881 - 27659998
Alignment:
Q  121 catctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgttcaaccctaatttacgtctaccttactaagggttt 220  Q
    |||||||||||||||||||| ||||| ||||  || |||  || ||||||||||||||||||||  ||||||||  |||  |||||||||||||||||||    
T  27659881 catctatgaatcttaggacattcataacacaccctttctc-gc-acttagtagttctacaaacggacaaccctatctta--tctaccttactaagggttt 27659976  T
Q  221 aaagagaatggtcttattaggtt 243  Q
     |||||||||||  |||||||||    
T  27659977 -aagagaatggttctattaggtt 27659998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 153
Target Start/End: Original strand, 14528611 - 14528677
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacatt 153  Q
    ||||||||||| |||| ||||||  ||||||  |||||||| |||||||||||||||||||||||||    
T  14528611 aggcaatgaagaccaatgttcccgaaggtcttcccatctataaatcttaggacactcatagcacatt 14528677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 21315137 - 21315236
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| |||||||||||| ||||||||| |||||||   | || |||| ||||||| ||||||| |||||| ||||||| |  ||||||||||||||||||    
T  21315137 tcccaaggcaatgaaggtcaaggttcc-ttaggtccacctatatatgcatcttagtacactcaaagcacactctctctca--tacttagtagttctacaa 21315233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 19787249 - 19787313
Alignment:
Q  95 aaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctct 159  Q
    |||||||| ||||| ||||||| |||| | |||||||||||||||| ||||| |||| |||||||    
T  19787249 aaggccaatgttccattaggtcggtccgtatatgaatcttaggacaatcataacacactctctct 19787313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 26394280 - 26394217
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcaca 151  Q
    |||||| |||||||||| |||| ||||||||  | | ||||||||||||||||||||||| ||||    
T  26394280 aggcaaagaaggccaagattcc-ttaggtctacctagctatgaatcttaggacactcataacaca 26394217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 1e-46; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 87 - 248
Target Start/End: Complemental strand, 19575841 - 19575679
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagct-acttagtagttctacaaacgt 185  Q
    ||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||||||| | |||||||| ||| ||||| ||||||||||||||     
T  19575841 aggcaatgaaggccaaggtccccttaggtcttctcatctatgaatcttaggacactcatagcatactctctctacgcttacttaatagttctacaaacgg 19575742  T
Q  186 tcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagc 248  Q
     || ||||||| ||||||||||||||||||||||| ||||||||| |||||||||||| ||||    
T  19575741 gcagccctaatctacgtctaccttactaagggtttcaagagaatgatcttattaggttatagc 19575679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 87 - 250
Target Start/End: Original strand, 8170343 - 8170507
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgt 185  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||| |||||||| || ||||||||||||||||||| |     
T  8170343 aggcaatgaaggccaaggttcccttaggtctgcccatctatgaatcttaggacactcatgacacactctctctacgcttacttagtagttctacaaatgg 8170442  T
Q  186 tcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
     ||||| |||| ||||| |||||||||| |||||| ||||||||| ||||| |||||| ||||||    
T  8170443 gcaaccataatctacgtataccttactacgggtttcaagagaatgatcttactaggttatagctt 8170507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 100 - 249
Target Start/End: Original strand, 4657532 - 4657682
Alignment:
Q  100 caaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagcta-cttagtagttctacaaacgttcaaccctaattt 198  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||  ||  |||||||||||||||||||  || ||||||| |    
T  4657532 caaggttcccttaggtctgtacatctatgaatcttaggacacacatagcacactctctctacactttcttagtagttctacaaacgggcagccctaatct 4657631  T
Q  199 acgtctaccttactaagggtttaaagagaatggtcttattaggttgtagct 249  Q
    |||||||||||||||||||||| || ||||||||  |||||||||||||||    
T  4657632 acgtctaccttactaagggtttcaatagaatggttatattaggttgtagct 4657682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 243
Target Start/End: Complemental strand, 8882733 - 8882578
Alignment:
Q  89 gcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgttc 187  Q
    |||||||||| |||||||||||||||| || |||||||||||||||||| |||||||||| || |||||||| || ||| | |||||||||||| ||  |    
T  8882733 gcaatgaaggtcaaggttcccttaggtatgcccatctatgaatcttaggccactcatagcccactctctctatgcttacctggtagttctacaagcgagc 8882634  T
Q  188 aaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  8882633 aaccgtaatctacgtctaccttactaagggtttcaagagaatggttttactaggtt 8882578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 243
Target Start/End: Complemental strand, 16229629 - 16229478
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagct-acttagtagttctaca 180  Q
    |||| ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||           |||||||||| ||||||||||||||||    
T  16229629 tcccaaggaaatgaaggccaaggttcccttatgtctgcccatctatgaatcttaggacactc-----------tctctaagcttacttagtagttctaca 16229541  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
    || |  || ||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  16229540 aatgggcagccctaatctacgtctaccttactaagggtttcaagagaatggtcttactaggtt 16229478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 228
Target Start/End: Original strand, 19167887 - 19168032
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| ||||||||||||| ||||||||||||| || | |||||||||||||||||||||||||||||| |  ||||||| || |||||| ||||||||||    
T  19167887 tcccaaggcaatgaaggcaaaggttcccttagttccgcccatctatgaatcttaggacactcatagcaga--ctctctatgcttacttaatagttctaca 19167984  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaa 228  Q
    ||||  || ||||||| |||||||||| |||||||||||| |||||||    
T  19167985 aacgggcagccctaatctacgtctaccatactaagggtttcaagagaa 19168032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 134 - 243
Target Start/End: Original strand, 19532395 - 19532505
Alignment:
Q  134 taggacactcatagcacattctctctaagct-acttagtagttctacaaacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    ||||||||||||| |||| |||||||||||| ||| ||||||||||||||||  ||  |||||| |||||||||||||| |||||||| |||||||||||    
T  19532395 taggacactcataacacactctctctaagcttactcagtagttctacaaacggacagtcctaatctacgtctaccttaccaagggtttcaagagaatggt 19532494  T
Q  233 cttattaggtt 243  Q
    |||| ||||||    
T  19532495 cttactaggtt 19532505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 87 - 179
Target Start/End: Original strand, 12411595 - 12411687
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctac 179  Q
    |||||||||||||||||||||| ||||||| | |||||| |||||||||||||||||| ||||||  |||||| | |||||||||||||||||    
T  12411595 aggcaatgaaggccaaggttccattaggtcggcccatctgtgaatcttaggacactcaaagcacaccctctctcacctacttagtagttctac 12411687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 16245306 - 16245237
Alignment:
Q  90 caatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctct 159  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||| |||||||    
T  16245306 caatgaaggccaaggttcctttaggtctacccatctatgaatcttaggacactcatagcacactctctct 16245237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 20023142 - 20023078
Alignment:
Q  102 aggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctac 166  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  20023142 aggttcccttaggtctgcacatctatgaatcttaggacactcatagcacactctctctaatctac 20023078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 87 - 232
Target Start/End: Original strand, 21302435 - 21302575
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcata--gcacattctctctaagctacttagtagttctacaaacg 184  Q
    ||||| |||||||||||||||   |||||||  |||||||||||||||||||||||||||   |||||| |||||     ||||||||||||||||||||    
T  21302435 aggcagtgaaggccaaggttcttgtaggtcttcccatctatgaatcttaggacactcatatcacacattatctct----cacttagtagttctacaaacg 21302530  T
Q  185 ttcaaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
      ||||||||  |  |||||||||||| |||||||| |||||||||||    
T  21302531 agcaacccta--tctcgtctaccttaccaagggttt-aagagaatggt 21302575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 184
Target Start/End: Complemental strand, 19171444 - 19171349
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacg 184  Q
    |||||||||||||||||||||   |||||||  || ||||||||||||||| |||||||| |||| |||||||  || ||||||| ||||||||||||    
T  19171444 aggcaatgaaggccaaggttcttgtaggtctacccttctatgaatcttagggcactcatatcacactctctct-cgc-acttagttgttctacaaacg 19171349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 184
Target Start/End: Original strand, 41509007 - 41509069
Alignment:
Q  120 ccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacg 184  Q
    ||||||||||||||||||||||||||| |||| |||||||  ||| |||||||||||||||||||    
T  41509007 ccatctatgaatcttaggacactcataacacactctctct-cgct-cttagtagttctacaaacg 41509069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 19908822 - 19908884
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactca 144  Q
    |||| |||||||||| ||||||||| | |||| || | |||||||||||||||||||||||||    
T  19908822 tcccaaggcaatgaaagccaaggtttcattagttcagcccatctatgaatcttaggacactca 19908884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 8319604 - 8319640
Alignment:
Q  120 ccatctatgaatcttaggacactcatagcacattctc 156  Q
    |||||||||||||||||||||||||||||||| ||||    
T  8319604 ccatctatgaatcttaggacactcatagcacactctc 8319640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 156
Target Start/End: Original strand, 8267491 - 8267525
Alignment:
Q  122 atctatgaatcttaggacactcatagcacattctc 156  Q
    |||||||||||||||||||||||||||||| ||||    
T  8267491 atctatgaatcttaggacactcatagcacactctc 8267525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 2167279 - 2167222
Alignment:
Q  89 gcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcata 146  Q
    |||||||||| ||| ||||   |||||||  |||||||||||||||||||||||||||    
T  2167279 gcaatgaaggtcaaagttcatgtaggtctacccatctatgaatcttaggacactcata 2167222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 82 - 243
Target Start/End: Original strand, 21755 - 21917
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagcta-cttagtagttctaca 180  Q
    |||| |||||||||||| ||||||||||||||||||  || | ||||||||||||||||||||||| |||||||||||  |||  |||||||||||||||    
T  21755 tcccaaggcaatgaaggacaaggttcccttaggtcttcccgtttatgaatcttaggacactcatagtacattctctctgcgctttcttagtagttctaca 21854  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
    ||||  || ||||||| |||| |||||||||||||||||| ||||||||||||||||||||||    
T  21855 aacgggcagccctaatctacgactaccttactaagggtttcaagagaatggtcttattaggtt 21917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 3e-44; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 82 - 248
Target Start/End: Complemental strand, 20005525 - 20005359
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| | |   ||||| ||||||||    
T  20005525 tcccaaggcaatgaaggccatggttcccttaggtcttcccatctatgaatcttaggacactcatagcacattctctctacgattactagtatttctacaa 20005426  T
Q  182 acgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagc 248  Q
    | |   ||||||||| || ||||||||| |||||||||| |||||||||||||||||||||| ||||    
T  20005425 atgggaaaccctaatctatgtctacctttctaagggtttcaagagaatggtcttattaggttatagc 20005359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 82 - 250
Target Start/End: Complemental strand, 22813350 - 22813181
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagct-acttagtagttctaca 180  Q
    |||| ||| ||||||| |||| |||||||||| |||  |||||||||||||||||||||||||||||||| ||| |||| ||| || |||||||||||||    
T  22813350 tcccaaggaaatgaagaccaatgttcccttagatctacccatctatgaatcttaggacactcatagcacactctatctacgcttacatagtagttctaca 22813251  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    || |  || ||||||| ||||||||||||| ||||||||| ||||||||||||||| || ||| ||||||    
T  22813250 aatgggcagccctaatctacgtctaccttaataagggtttcaagagaatggtcttactaagttatagctt 22813181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 14638066 - 14638215
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| |||||||||| ||||||||||| |||| ||   ||||||||||||||||||||||||||||||||  |||||| |  |||||||||||| |||||    
T  14638066 tcccaaggcaatgaaagccaaggttccattagttcatcccatctatgaatcttaggacactcatagcacaccctctctcacttacttagtagttttacaa 14638165  T
Q  182 acgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    |||  ||| |||||| ||||||||||||||||||||||| |||||||||||    
T  14638166 acgggcaatcctaatctacgtctaccttactaagggttt-aagagaatggt 14638215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 17823360 - 17823211
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| ||| ||||| |||||||||||| ||||||||  ||||||||||||||||| |||||||||||||| ||||||| |  || |||||||||| ||||    
T  17823360 tcccaaggaaatgatggccaaggttccattaggtcttcccatctatgaatcttagaacactcatagcacactctctctcacttatttagtagttcaacaa 17823261  T
Q  182 acgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    ||   || ||||||| ||||||||||||||||||||||| |||||||||||    
T  17823260 acaggcagccctaatctacgtctaccttactaagggttt-aagagaatggt 17823211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 91 - 250
Target Start/End: Complemental strand, 21841388 - 21841230
Alignment:
Q  91 aatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgttcaa 189  Q
    |||| |||||||||||||||||| |||| ||||||||  ||||||||||||||||||||||  ||||||| || | |||||||||| ||||||||  ||     
T  21841388 aatggaggccaaggttcccttagatctgcccatctatagatcttaggacactcatagcaca--ctctctacgctttcttagtagttatacaaacgggcag 21841291  T
Q  190 ccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    ||||||| ||||| || |||||||||||||| |||||||||||  ||||||||| ||||||    
T  21841290 ccctaatctacgtttagcttactaagggtttcaagagaatggttctattaggttatagctt 21841230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 242
Target Start/End: Complemental strand, 27124153 - 27123996
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| |||||| ||||||||||||||||||| ||||  ||||| ||||||||||||||||||||| |||  |||||||| | | |||||||||||| |||    
T  27124153 tcccaaggcaacgaaggccaaggttcccttaagtcttcccatcaatgaatcttaggacactcataacac--tctctctacgtt-cttagtagttcttcaa 27124057  T
Q  182 acgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggt 242  Q
    |||  |||||||| | ||||||| ||||||||||||||| |||||||||||  ||||||||    
T  27124056 acgagcaaccctattctacgtctgccttactaagggtttcaagagaatggttctattaggt 27123996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 243
Target Start/End: Complemental strand, 22412659 - 22412504
Alignment:
Q  89 gcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctcta-agctacttagtagttctacaaacgttc 187  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||| |||||||||| |||| ||||| || |  | ||||||||||||||||| |  |    
T  22412659 gcaatgaagtccaaggttcccttaggtcttcccatctatgaatcttatgacactcataacacactctctgtacactttcttagtagttctacaaatgggc 22412560  T
Q  188 aaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggtt 243  Q
    | ||||||| || | | |||||||||||||||| ||||||||||||||| ||||||    
T  22412559 agccctaatctatgccaaccttactaagggtttcaagagaatggtcttactaggtt 22412504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 21847027 - 21846894
Alignment:
Q  120 ccatctatgaatcttaggacactcatagcacattctctct--aagcta-cttagtagttctacaaacgttcaaccctaatttacgtctaccttactaagg 216  Q
    ||||||||||||||||||||||| |||||||| |||||||  | |||  |||||||||||||||||||  |||||||||| |||||||||||||||||||    
T  21847027 ccatctatgaatcttaggacactaatagcacactctctctctatgctttcttagtagttctacaaacgggcaaccctaatctacgtctaccttactaagg 21846928  T
Q  217 gtttaaagagaatggtcttattaggttgtagctt 250  Q
    |||| ||| |||||||  ||||||||| ||||||    
T  21846927 gtttcaagcgaatggttatattaggttatagctt 21846894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 232
Target Start/End: Original strand, 14722451 - 14722592
Alignment:
Q  90 caatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgttcaa 189  Q
    ||||||||| |||||||||||| | || | ||||||||||||||||||||| ||||||||||  ||||||| ||| | ||||||||||||||| |  ||     
T  14722451 caatgaaggtcaaggttccctttgttcagcccatctatgaatcttaggacattcatagcacaccctctctacgct-cctagtagttctacaaaagggcag 14722549  T
Q  190 ccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    ||||||| || ||||||||||||||| |||| |||||||||||    
T  14722550 ccctaatctaggtctaccttactaagagtttcaagagaatggt 14722592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 230
Target Start/End: Complemental strand, 23009016 - 23008869
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||||||  ||||||| || |||| ||||||||||||    
T  23009016 tcccaaggcaatgaaggccaaggttcccttaggtctgcccacctatgaatcataggacactaatagcaca--ctctctacgcttactaagtagttctaca 23008919  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatg 230  Q
    || |     ||||||| |||||||| ||||||||| |||| |||||||||    
T  23008918 aatgggttgccctaatgtacgtctaacttactaagagtttcaagagaatg 23008869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 230
Target Start/End: Original strand, 23779348 - 23779495
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||||||  ||||||| || |||| ||||||||||||    
T  23779348 tcccaaggcaatgaaggccaaggttcccttaggtctgcccacctatgaatcataggacactaatagcaca--ctctctacgcttactaagtagttctaca 23779445  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatg 230  Q
    || |     ||||||| |||||||| ||||||||| |||| |||||||||    
T  23779446 aatgggttgccctaatgtacgtctaacttactaagagtttcaagagaatg 23779495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 228
Target Start/End: Original strand, 24478791 - 24478928
Alignment:
Q  89 gcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgttca 188  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||| ||||  ||||||| ||| |||||||| ||||||||||  ||    
T  24478791 gcaatgaaggcgaaggttcccttagttctgcccatctatgaatcttaggacactcataccacagcctctctacgct-cttagtagctctacaaacgggca 24478889  T
Q  189 accctaatttacgtctaccttactaagggtttaaagagaa 228  Q
     |||||||  | ||||| |||||| ||||||| |||||||    
T  24478890 gccctaatcaatgtcta-cttacttagggtttcaagagaa 24478928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 11136397 - 11136505
Alignment:
Q  89 gcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctcta-agctacttagtagttctacaaacgttc 187  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||  |||| || |  | ||||||| |||||||||||  |    
T  11136397 gcaatgaaggccaaggttcccttaggtctgtccatctatgtatcttatgacactcatagcacacgctctttatactttcttagtaattctacaaacgaac 11136496  T
Q  188 aaccctaat 196  Q
    |||||||||    
T  11136497 aaccctaat 11136505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 90 - 241
Target Start/End: Original strand, 9517239 - 9517389
Alignment:
Q  90 caatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgttcaa 189  Q
    ||||||||| ||||||||||||||||  | ||||||||||||||||||||||||||||||||  || |||| |||  ||||||||||||||||||  ||     
T  9517239 caatgaaggacaaggttcccttaggttggcccatctatgaatcttaggacactcatagcacaccctttctacgct-tttagtagttctacaaacgggcag 9517337  T
Q  190 ccctaatttacgtctaccttactaagggtttaaagagaatggtcttattagg 241  Q
    |  |||| |||||| ||||||| |||||||  ||||||| |||  |||||||    
T  9517338 ctataatctacgtcaaccttaccaagggttgcaagagaaaggttctattagg 9517389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 222
Target Start/End: Original strand, 5625155 - 5625290
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgtt 186  Q
    ||||||||||| |||||||||| |||  || | |||| ||||||||||| ||||||||||||||||||||||| |  || ||| |||||||||||| |      
T  5625155 aggcaatgaagaccaaggttccattacttcagcccatatatgaatcttaagacactcatagcacattctctctcacttaattaatagttctacaaatggg 5625254  T
Q  187 caaccctaatttacgtctaccttactaagggtttaa 222  Q
    || | ||||| |||||| || |||||||||||||||    
T  5625255 cagcgctaatctacgtcgacattactaagggtttaa 5625290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 250
Target Start/End: Original strand, 17382492 - 17382651
Alignment:
Q  92 atgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagcta-cttagtagttctacaaacgttcaac 190  Q
    ||||||||  |||||||||||| |||  |||| ||| |||||||| |||| ||||||||| ||||| || |||  |||||||||||||||||||   ||     
T  17382492 atgaaggctcaggttcccttagttcttcccatttataaatcttagaacacccatagcacactctctttacgctttcttagtagttctacaaacgggaaat 17382591  T
Q  191 cctaatttacgtctaccttactaagggtttaaagagaatggtcttattaggttgtagctt 250  Q
    |||||| |||||||||||||| ||||| || |||||||| ||  ||||||| ||||||||    
T  17382592 cctaatctacgtctaccttacgaaggggttcaagagaattgttctattaggctgtagctt 17382651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 1635476 - 1635537
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactc 143  Q
    |||| ||||||||||||||||||||||  |||||||  ||||||||||||||||||||||||    
T  1635476 tcccaaggcaatgaaggccaaggttcctgtaggtctacccatctatgaatcttaggacactc 1635537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 22409917 - 22409818
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| |||||||||| ||||||||||  |||||||   |||||||||||||||| |||||||||||||||  ||||||  || |||||||||||||||||    
T  22409917 tcccaaggcaatgaaagccaaggttca-ttaggtccaaccatctatgaatcttatgacactcatagcacaccctctct-cgc-acttagtagttctacaa 22409821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 21688429 - 21688364
Alignment:
Q  91 aatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctc 156  Q
    |||||||||||| |||||   |||||| |||| |||||||||||||||||||||||||||| ||||    
T  21688429 aatgaaggccaatgttcctgaaggtctttccaactatgaatcttaggacactcatagcacactctc 21688364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 232
Target Start/End: Original strand, 14072718 - 14072835
Alignment:
Q  111 taggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgttcaaccctaatttacgtctacctta 210  Q
    |||||| | |||||||||||||||||  |||||||||||||  |||||| |  | |||||||||||||||||||  || |||||  |  |||||||||||    
T  14072718 taggtcagcccatctatgaatcttagatcactcatagcacaccctctctca--ttcttagtagttctacaaacggacatcccta--tgtcgtctacctta 14072813  T
Q  211 ctaagggtttaaagagaatggt 232  Q
    | ||||||||  ||||||||||    
T  14072814 ccaagggttttgagagaatggt 14072835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 22850083 - 22850010
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctc 156  Q
    |||| ||||||||||||| |||||||| || |||||  ||||||||| || ||||||||||||||||||| ||||    
T  22850083 tcccaaggcaatgaaggctaaggttcc-ttcggtctacccatctatgcattttaggacactcatagcacactctc 22850010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 232
Target Start/End: Complemental strand, 20144684 - 20144543
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgtt 186  Q
    |||||||||||| ||||||||| |||  || | |||||||| |||||||||  ||||||||||||  ||||||   |  ||||||||||||| |||||      
T  20144684 aggcaatgaaggacaaggttccattatttcagcccatctataaatcttaggtaactcatagcacaccctctct--ccctcttagtagttctaaaaacggg 20144587  T
Q  187 caaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
     | |||||  |  |||||||||||| |||||||| |||||||||||    
T  20144586 aagcccta--tctcgtctaccttaccaagggttttaagagaatggt 20144543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 232
Target Start/End: Original strand, 22188155 - 22188296
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgtt 186  Q
    |||||||||||| ||||||||| |||  || | |||||||| |||||||||  ||||||||||||  ||||||   |  ||||||||||||| |||||      
T  22188155 aggcaatgaaggacaaggttccattatttcagcccatctataaatcttaggtaactcatagcacaccctctct--ccctcttagtagttctaaaaacggg 22188252  T
Q  187 caaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
     | |||||  |  |||||||||||| |||||||| |||||||||||    
T  22188253 aagcccta--tctcgtctaccttaccaagggttttaagagaatggt 22188296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 11177451 - 11177520
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctc 156  Q
    |||||||||||||||| ||| |  |||||| | |||||| | |||||||||||||||||| |||| ||||    
T  11177451 aggcaatgaaggccaatgttgcagtaggtcagcccatctgttaatcttaggacactcataacacactctc 11177520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 87 - 241
Target Start/End: Original strand, 70355 - 70509
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctacaaacgt 185  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||| || ||||||||||||||||||     
T  70355 aggcaatgaaggccaaggttcccttaagtctgtccatctatgaa-cttaggacactcataacacattctctctaagcttatttagtagttctacaaacga 70453  T
Q  186 tcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttattagg 241  Q
     |||||||||| |||| |||| ||||||| ||||| |||| ||||||  |||||||    
T  70454 gcaaccctaatctacgcctactttactaatggtttcaagataatggttctattagg 70509  T

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Target: scaffold1156 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold1156
Description:

Target: scaffold1156; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 101 - 222
Target Start/End: Original strand, 58 - 179
Alignment:
Q  101 aaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgttcaaccctaatttac 200  Q
    |||||||||| ||||||  |||||||| ||||||||||||||||||||||| ||||||| |  |||||| ||||||||||||||  || ||||||| |||    
T  58 aaggttccctcaggtcttcccatctataaatcttaggacactcatagcacactctctctcacttacttattagttctacaaacgggcatccctaatctac 157  T
Q  201 gtctaccttactaagggtttaa 222  Q
    ||||||||||||||||||||||    
T  158 gtctaccttactaagggtttaa 179  T

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Target: scaffold0263 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 16068 - 16216
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagc-tacttagtagttctaca 180  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||| || ||||   ||| | || |    
T  16068 tcccaaggcaatgaagggcaaggttcccttaggtctgtccatctatgaatcttcggacactcataacacactctctctacgcttact---taggtatata 16164  T
Q  181 aacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    |||   || || ||||||| |||||||||||||||||||| |||||||||||    
T  16165 aacaggcagccttaatttatgtctaccttactaagggtttcaagagaatggt 16216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 248
Target Start/End: Original strand, 234672 - 234800
Alignment:
Q  120 ccatctatgaatcttaggacactcatagcacattctctctaagct-acttagtagttctacaaacgttcaaccctaatttacgtctaccttactaagggt 218  Q
    ||||||||||||||||| ||||||||| |||| ||| |||| ||| ||||||||||||||||||||   |||| |||| ||||||||||||| |||||||    
T  234672 ccatctatgaatcttagaacactcatatcacactctttctacgcttacttagtagttctacaaacgaa-aaccttaatctacgtctaccttaataagggt 234770  T
Q  219 ttaaagagaatggtcttattaggttgtagc 248  Q
    || || ||||||||  ||||||||| ||||    
T  234771 ttcaaaagaatggttctattaggttatagc 234800  T

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Target: scaffold0638 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 232
Target Start/End: Complemental strand, 408 - 261
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| |||||| ||||||||||||||| |||| ||   ||||| ||||||||||||||||||||||||||  ||||||  ||| ||||||||||||||||    
T  408 tcccaaggcaacgaaggccaaggttccattagttcatcccatcaatgaatcttaggacactcatagcacaccctctctccgct-cttagtagttctacaa 310  T
Q  182 acgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    ||    | |||||  |  ||||||||||||||||||||| |||| ||||||    
T  309 acaggaagcccta--tctcgtctaccttactaagggttttaagacaatggt 261  T

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Target: scaffold0040 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 26325 - 26426
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| ||| |||||||||||||||||| |||| |  | |||||||||||||||||||| |||||||||||  |||||||  || | ||||||||||||||    
T  26325 tcccaaggaaatgaaggccaaggttccattagtttagcccatctatgaatcttaggacgctcatagcacaccctctctaccct-cctagtagttctacaa 26423  T
Q  182 acg 184  Q
    |||    
T  26424 acg 26426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 11657 - 11718
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagc 148  Q
    |||||||||||||||||||||   |||||| | |||||||||||||||||||||||||||||    
T  11657 aggcaatgaaggccaaggttcatgtaggtccgcccatctatgaatcttaggacactcatagc 11718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 27592 - 27491
Alignment:
Q  82 tccctaggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaa 181  Q
    |||| ||||||||||||||||||||||||||||||    ||| ||||||||||||  ||||| |||||||  ||||||| | | | ||||||||||||||    
T  27592 tcccaaggcaatgaaggccaaggttcccttaggtcgactcatttatgaatcttagagcactcgtagcacaccctctctacg-ttcctagtagttctacaa 27494  T
Q  182 acg 184  Q
    |||    
T  27493 acg 27491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 156
Target Start/End: Original strand, 40101 - 40170
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctc 156  Q
    |||||||||||  ||| |||||   ||||||  |||||||||||||||||||||||||||||||||||||    
T  40101 aggcaatgaagatcaatgttcctgaaggtcttcccatctatgaatcttaggacactcatagcacattctc 40170  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 72547 - 72642
Alignment:
Q  87 aggcaatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacg 184  Q
    |||||||||||| ||||||||| |||  || | |||||||| |||||||||| ||||||||||||  ||||||   |  |||||||||||||||||||    
T  72547 aggcaatgaaggacaaggttccattatttcagcccatctataaatcttaggaaactcatagcacaccctctct--ccctcttagtagttctacaaacg 72642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 232
Target Start/End: Original strand, 4100 - 4236
Alignment:
Q  91 aatgaaggccaaggttcccttaggtctgtccatctatgaatcttaggacactcatagcacattctctctaagctacttagtagttctacaaacgttcaac 190  Q
    ||||||||||| |||||   ||||||   |||||||||||| |||||||||||||| |||| |||||||    ||||||||||||| ||||||   ||||    
T  4100 aatgaaggccagggttctagtaggtccacccatctatgaattttaggacactcataacacactctctct--tgtacttagtagttccacaaacaggcaac 4197  T
Q  191 cctaatttacgtctaccttactaagggtttaaagagaatggt 232  Q
    ||||  |  |||||||||||| || || ||||||||||||||    
T  4198 ccta--tctcgtctaccttaccaa-ggattaaagagaatggt 4236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 102942 - 102840
Alignment:
Q  138 acactcatagcacattctctctaagctacttagtagttctacaaacgttcaaccctaatttacgtctaccttactaagggtttaaagagaatggtcttat 237  Q
    ||||||||| ||||  |||||| |  |||||||||||||||| ||||  || |  |||| |||||| |||||||||||||||| |||||||||||  |||    
T  102942 acactcatatcacaccctctctcacttacttagtagttctactaacgggcagctataatctacgtccaccttactaagggttt-aagagaatggttctat 102844  T
Q  238 tagg 241  Q
    ||||    
T  102843 tagg 102840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 148
Target Start/End: Complemental strand, 42776 - 42748
Alignment:
Q  120 ccatctatgaatcttaggacactcatagc 148  Q
    |||||||||||||||||||||||||||||    
T  42776 ccatctatgaatcttaggacactcatagc 42748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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