View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17947_low_27 (Length: 237)

Name: NF17947_low_27
Description: NF17947
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17947_low_27
NF17947_low_27
[»] scaffold0756 (1 HSPs)
scaffold0756 (96-237)||(4297-4438)
[»] chr1 (14 HSPs)
chr1 (115-233)||(20106806-20106922)
chr1 (124-237)||(18831137-18831250)
chr1 (117-237)||(24054634-24054754)
chr1 (127-237)||(16916270-16916380)
chr1 (119-237)||(26612371-26612489)
chr1 (124-237)||(14781186-14781299)
chr1 (122-237)||(18826311-18826426)
chr1 (132-231)||(728129-728228)
chr1 (153-237)||(18735600-18735684)
chr1 (132-231)||(20147148-20147247)
chr1 (160-231)||(25403449-25403520)
chr1 (117-237)||(22623556-22623676)
chr1 (190-231)||(15159902-15159943)
chr1 (140-179)||(24054298-24054337)
[»] chr6 (9 HSPs)
chr6 (115-234)||(22412368-22412487)
chr6 (124-237)||(21846774-21846887)
chr6 (115-224)||(23008720-23008829)
chr6 (115-224)||(23779535-23779644)
chr6 (115-236)||(22813052-22813173)
chr6 (115-237)||(20005228-20005350)
chr6 (115-237)||(11136529-11136651)
chr6 (115-211)||(21841101-21841197)
chr6 (173-237)||(17382657-17382721)
[»] chr7 (11 HSPs)
chr7 (115-237)||(13288736-13288858)
chr7 (124-237)||(16058242-16058354)
chr7 (115-237)||(1861579-1861701)
chr7 (159-236)||(17190569-17190646)
chr7 (139-231)||(4449627-4449719)
chr7 (118-237)||(8877955-8878074)
chr7 (124-237)||(13278123-13278236)
chr7 (124-177)||(9977372-9977425)
chr7 (190-237)||(11803688-11803735)
chr7 (185-224)||(18366313-18366352)
chr7 (174-236)||(20582877-20582939)
[»] chr2 (11 HSPs)
chr2 (116-237)||(24090250-24090371)
chr2 (127-236)||(25536517-25536626)
chr2 (124-236)||(25531163-25531275)
chr2 (127-237)||(17198523-17198633)
chr2 (115-230)||(25921245-25921359)
chr2 (159-237)||(18121620-18121698)
chr2 (132-237)||(26667963-26668068)
chr2 (155-230)||(25535935-25536010)
chr2 (155-237)||(25536222-25536304)
chr2 (115-235)||(22378844-22378964)
chr2 (160-236)||(29143569-29143645)
[»] chr8 (10 HSPs)
chr8 (115-236)||(26831680-26831801)
chr8 (115-237)||(17997176-17997298)
chr8 (115-237)||(23892523-23892645)
chr8 (124-236)||(26138801-26138913)
chr8 (15-96)||(18524761-18524842)
chr8 (124-237)||(24722956-24723069)
chr8 (132-237)||(18569514-18569619)
chr8 (115-236)||(19264701-19264821)
chr8 (115-237)||(17509857-17509979)
chr8 (160-223)||(26887468-26887531)
[»] chr5 (12 HSPs)
chr5 (115-237)||(28665426-28665548)
chr5 (124-237)||(19007877-19007990)
chr5 (115-237)||(20859313-20859435)
chr5 (127-235)||(20549041-20549149)
chr5 (127-237)||(20563453-20563563)
chr5 (115-237)||(24141100-24141222)
chr5 (125-237)||(16522896-16523003)
chr5 (155-236)||(20314848-20314929)
chr5 (185-236)||(24659409-24659460)
chr5 (175-237)||(34129257-34129319)
chr5 (140-179)||(16523531-16523570)
chr5 (140-179)||(20859004-20859043)
[»] chr3 (9 HSPs)
chr3 (124-236)||(19532520-19532632)
chr3 (115-237)||(20022899-20023021)
chr3 (115-236)||(8882442-8882563)
chr3 (135-237)||(16229362-16229464)
chr3 (127-237)||(8170514-8170626)
chr3 (124-237)||(19575557-19575670)
chr3 (115-220)||(20122306-20122411)
chr3 (176-230)||(19168070-19168124)
chr3 (173-237)||(4657690-4657754)
[»] chr4 (3 HSPs)
chr4 (124-237)||(25095305-25095418)
chr4 (115-237)||(17025668-17025790)
chr4 (185-237)||(11253132-11253184)
[»] scaffold0034 (1 HSPs)
scaffold0034 (143-231)||(77078-77166)
[»] scaffold0671 (1 HSPs)
scaffold0671 (124-231)||(1103-1210)
[»] scaffold0056 (1 HSPs)
scaffold0056 (124-237)||(21931-22044)
[»] scaffold0008 (1 HSPs)
scaffold0008 (124-230)||(234816-234922)


Alignment Details
Target: scaffold0756 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0756
Description:

Target: scaffold0756; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 96 - 237
Target Start/End: Original strand, 4297 - 4438
Alignment:
Q  96 tcgaaagagctttaatgctccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctagga 195  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4297 tcgaaagagctttaatgctccataaaagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctagga 4396  T
Q  196 attaaccggttagtaattagggaaacaagcacctagctgtcc 237  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  4397 attaactggttagtaattagggaaacaagcacctagctgtcc 4438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 115 - 233
Target Start/End: Complemental strand, 20106922 - 20106806
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||    
T  20106922 ccataagagttgttgaatctagatgtaggtacccagtggctagaacccattgggt--tgtggtgcattagcgaagctaggaattaactggttagtaatta 20106825  T
Q  215 gggaaacaagcacctagct 233  Q
    |||||||||||||||||||    
T  20106824 gggaaacaagcacctagct 20106806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 18831250 - 18831137
Alignment:
Q  124 ttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaa 223  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||||| | ||||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  18831250 ttgttgaccctagacgtagacacccagtggctagaacccattgggtcaggcggtgccttaccaaagctaggaattaactggttagtaattagggaaacaa 18831151  T
Q  224 gcacctagctgtcc 237  Q
    ||||||||||||||    
T  18831150 gcacctagctgtcc 18831137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 24054754 - 24054634
Alignment:
Q  117 ataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagg 216  Q
    |||||| ||||||| | |||| ||||||||| ||||||||||||| |||||||| |||||||||||| ||||||||| ||| ||| ||||||||||||||    
T  24054754 ataagaattgttgaccttagatgtaggtaccaagtggctagaaccgattgggtcgtgtggtgcattaccgaagctagaaatgaactggttagtaattagg 24054655  T
Q  217 gaaacaagcacctagctgtcc 237  Q
    |||||||||||||||||||||    
T  24054654 gaaacaagcacctagctgtcc 24054634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 127 - 237
Target Start/End: Original strand, 16916270 - 16916380
Alignment:
Q  127 ttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagca 226  Q
    |||| |||||||||||||||| ||||||||||||||||||| || |||||||||||| | ||| ||||||||||| | ||||||||||||||||||||||    
T  16916270 ttgaccctagacgtaggtacctagtggctagaacccattggatcgtgtggtgcattaccaaagttaggaattaactgtttagtaattagggaaacaagca 16916369  T
Q  227 cctagctgtcc 237  Q
    |||||||||||    
T  16916370 cctagctgtcc 16916380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 26612371 - 26612489
Alignment:
Q  119 aagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattaggga 218  Q
    |||| ||||| | |||||||||||||||| ||||||||||||| |||||||| |||||||||||| | ||| ||||||||||| ||||||||||||||||    
T  26612371 aagaattgttaaccctagacgtaggtaccaagtggctagaaccaattgggtcctgtggtgcattaccaaagttaggaattaactggttagtaattaggga 26612470  T
Q  219 aacaagcacctagctgtcc 237  Q
    ||||||||||||| |||||    
T  26612471 aacaagcacctagttgtcc 26612489  T

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Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 14781186 - 14781299
Alignment:
Q  124 ttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaa 223  Q
    ||||||| |||||||||||||||| ||||| |   |||||||||||| |||||||| ||| | ||||||||||||||| |||||||||||||||||||||    
T  14781186 ttgttgaccctagacgtaggtacctagtggatgatacccattgggtcgtgtggtgcgttaccaaagctaggaattaactggttagtaattagggaaacaa 14781285  T
Q  224 gcacctagctgtcc 237  Q
    ||||||||||||||    
T  14781286 gcacctagctgtcc 14781299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 237
Target Start/End: Complemental strand, 18826426 - 18826311
Alignment:
Q  122 agttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaac 221  Q
    ||||||||  |||||||||||||||| |||||||| | |||||||||||| ||||||| ||| |||||||||||||||||  ||||||||||| |||| |    
T  18826426 agttgttgtccctagacgtaggtacctagtggctaaagcccattgggtcaggtggtgccttaccgaagctaggaattaacttgttagtaattaaggaagc 18826327  T
Q  222 aagcacctagctgtcc 237  Q
    ||||||||||||||||    
T  18826326 aagcacctagctgtcc 18826311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 728228 - 728129
Alignment:
Q  132 cctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctag 231  Q
    |||||||||||||||||| ||| |   |||||||||||| |||||||||||| |||||||||||| |||| ||||||||||||| |||||||||||||||    
T  728228 cctagacgtaggtacccaatggatgatacccattgggtcgtgtggtgcattaccgaagctaggaagtaactggttagtaattagagaaacaagcacctag 728129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 18735600 - 18735684
Alignment:
Q  153 gctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctagctgtcc 237  Q
    |||||| ||||||||||   ||||||| ||| |||| ||||||||||||  ||||||||||||||||||||||||||||| ||||    
T  18735600 gctagagcccattgggttgggtggtgccttaccgaacctaggaattaactagttagtaattagggaaacaagcacctagcggtcc 18735684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 20147247 - 20147148
Alignment:
Q  132 cctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctag 231  Q
    ||||| |||||||||||| ||| |   || ||||||||| |||||||||||| |||||||||||| ||| |||| |||||||||||||| ||| ||||||    
T  20147247 cctaggcgtaggtacccaatggatgatactcattgggtcgtgtggtgcattaccgaagctaggaagtaatcggtgagtaattagggaaagaagtacctag 20147148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 25403449 - 25403520
Alignment:
Q  160 cccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctag 231  Q
    |||||||||||  ||||||| ||| |||| |||||||||||| | |||||||||||||||||||||||||||    
T  25403449 cccattgggtcgggtggtgccttaccgaacctaggaattaacagattagtaattagggaaacaagcacctag 25403520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 22623676 - 22623556
Alignment:
Q  117 ataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagg 216  Q
    |||||| ||||||| | |||  ||||||||  ||||| |||| ||||||  |||  ||||||| ||| | || |||||||||||  ||||||||||||||    
T  22623676 ataagaattgttgaccttaggtgtaggtacttagtggatagatcccattaagtcgggtggtgccttacccaacctaggaattaattggttagtaattagg 22623577  T
Q  217 gaaacaagcacctagctgtcc 237  Q
    ||||||||||| ||| |||||    
T  22623576 gaaacaagcacttagatgtcc 22623556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 15159902 - 15159943
Alignment:
Q  190 ctaggaattaaccggttagtaattagggaaacaagcacctag 231  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  15159902 ctaggaattaactggttagtaattagggaaacaagtacctag 15159943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 24054337 - 24054298
Alignment:
Q  140 taggtacccagtggctagaacccattgggtcatgtggtgc 179  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  24054337 taggtacccagtggctaaaacccattgggtcaggtggtgc 24054298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 8e-45; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 115 - 234
Target Start/End: Original strand, 22412368 - 22412487
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    |||||||| ||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||  |||||||||||    
T  22412368 ccataagaattgttgaccttagacgtaggtacccagtggctagaacccattgggtcgtgtggtgcattagcgaagttaggaattaacttgttagtaatta 22412467  T
Q  215 gggaaacaagcacctagctg 234  Q
    ||||||||||||||||||||    
T  22412468 gggaaacaagcacctagctg 22412487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 21846774 - 21846887
Alignment:
Q  124 ttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaa 223  Q
    ||||||| |||||||||||||||| ||||| |   |||||||||||| |||||||||||| |||| |||||||||||| ||||| |||||||||||||||    
T  21846774 ttgttgaccctagacgtaggtacctagtggatgatacccattgggtcttgtggtgcattaccgaaactaggaattaactggttaataattagggaaacaa 21846873  T
Q  224 gcacctagctgtcc 237  Q
    | ||||||||||||    
T  21846874 gaacctagctgtcc 21846887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 224
Target Start/End: Original strand, 23008720 - 23008829
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||| || ||||||| ||||||||||||||||  |||||||||| |||||||||| |||||||||||| ||||||||||||||||  ||||||||||||    
T  23008720 ccataggaattgttgaccctagacgtaggtacctggtggctagaatccattgggtcgtgtggtgcattaccgaagctaggaattaattggttagtaatta 23008819  T
Q  215 gggaaacaag 224  Q
     |||||||||    
T  23008820 tggaaacaag 23008829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 224
Target Start/End: Complemental strand, 23779644 - 23779535
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||| || ||||||| ||||||||||||||||  |||||||||| |||||||||| |||||||||||| ||||||||||||||||  ||||||||||||    
T  23779644 ccataggaattgttgaccctagacgtaggtacctggtggctagaatccattgggtcgtgtggtgcattaccgaagctaggaattaattggttagtaatta 23779545  T
Q  215 gggaaacaag 224  Q
     |||||||||    
T  23779544 tggaaacaag 23779535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 22813052 - 22813173
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||||||  |||||| |||||||||||||||| ||||| |   |||||||||||| |||||||||||| |||||||||||||||||  |||| ||||||    
T  22813052 ccataagaaatgttgaccctagacgtaggtacctagtggatgatacccattgggtcgtgtggtgcattaccgaagctaggaattaactagttaataatta 22813151  T
Q  215 gggaaacaagcacctagctgtc 236  Q
    |||||||| ||||| |||||||    
T  22813152 gggaaacatgcacccagctgtc 22813173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 237
Target Start/End: Original strand, 20005228 - 20005350
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||| || ||| ||| |||||||||||||||||| ||| |   |||||||||||| || ||||||||| |||||| ||||||||||  |||||||||||    
T  20005228 ccataggaattgctgaccctagacgtaggtacccaatggatgatacccattgggtcgtggggtgcattaccgaagcaaggaattaactagttagtaatta 20005327  T
Q  215 gggaaacaagcacctagctgtcc 237  Q
      |||||||||||||||||||||    
T  20005328 cagaaacaagcacctagctgtcc 20005350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 11136651 - 11136529
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||| || ||||||| |||||||||||||| ||| ||| |   ||||||||||||  ||||||| ||| ||||| ||||||||||  ||||||||||||    
T  11136651 ccataggaattgttgaccctagacgtaggtatccaatggatgatacccattgggtcgggtggtgccttaccgaagttaggaattaaatggttagtaatta 11136552  T
Q  215 gggaaacaagcacctagctgtcc 237  Q
    ||||||||||||| ||| |||||    
T  11136551 gggaaacaagcacttagatgtcc 11136529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 21841101 - 21841197
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaa 211  Q
    |||||||| ||||||| | || | ||||||||| ||||| |   |||||||||||| |||||||||||| |||||||| ||||||||  ||||||||    
T  21841101 ccataagaattgttgaccttatatgtaggtacctagtggatgatacccattgggtcgtgtggtgcattaccgaagctatgaattaactagttagtaa 21841197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 17382721 - 17382657
Alignment:
Q  173 gtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctagctgtcc 237  Q
    ||||||| ||| |||| ||| |||||||| |||||||||||| ||||||||| || |||||||||    
T  17382721 gtggtgccttaccgaacctaagaattaactggttagtaattaaggaaacaagtacttagctgtcc 17382657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 3e-44; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 115 - 237
Target Start/End: Original strand, 13288736 - 13288858
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||  |||||||||||    
T  13288736 ccatatgaattgttgaccctagacgtaggtacccagtggctagaacccattgggtcgtctggtgcattaccgaagctaggaattaactcgttagtaatta 13288835  T
Q  215 gggaaacaagcacctagctgtcc 237  Q
    |||||||||||||||||||||||    
T  13288836 gggaaacaagcacctagctgtcc 13288858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 16058242 - 16058354
Alignment:
Q  124 ttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaa 223  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||| | |||||||||| |||||||||||||||||  || |||||||||||||||||    
T  16058242 ttgttgactctagacgtaggtacc-agtggctagaacccattgggtcgtctggtgcattatcgaagctaggaattaactagtcagtaattagggaaacaa 16058340  T
Q  224 gcacctagctgtcc 237  Q
    |||||||| |||||    
T  16058341 gcacctagttgtcc 16058354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 1861701 - 1861579
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||| || ||||| | |||||| ||||||||||| || |||||||||||||||||| ||||||| ||| ||||||||||| |||||  |||||||||||    
T  1861701 ccataggaattgtttaccctagatgtaggtacccaatgactagaacccattgggtcaggtggtgccttatcgaagctaggatttaactagttagtaatta 1861602  T
Q  215 gggaaacaagcacctagctgtcc 237  Q
    | ||| ||||||||||| |||||    
T  1861601 gagaatcaagcacctagttgtcc 1861579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 17190569 - 17190646
Alignment:
Q  159 acccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctagctgtc 236  Q
    |||||||||||| ||||||| ||||  ||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  17190569 acccattgggtcgtgtggtgtattactgaagctaggaattaacttgttagtaattagggaaacaagcacctagctgtc 17190646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 231
Target Start/End: Complemental strand, 4449719 - 4449627
Alignment:
Q  139 gtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctag 231  Q
    ||||||||| |||| ||||||||||||||||   ||||||| ||| ||||||||| ||||||| | |||||||||||||||| ||||||||||    
T  4449719 gtaggtacctagtgactagaacccattgggttgggtggtgccttaccgaagctagaaattaactgattagtaattagggaaaaaagcacctag 4449627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 237
Target Start/End: Complemental strand, 8878074 - 8877955
Alignment:
Q  118 taagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattaggg 217  Q
    ||||| ||||||| |||||||||||||||  ||||| |    ||||||| |||  ||||||| ||| | ||||||||||||||| ||||||||||||| |    
T  8878074 taagaattgttgaccctagacgtaggtacttagtggatgatgcccattgagtcgggtggtgccttaccaaagctaggaattaactggttagtaattagtg 8877975  T
Q  218 aaacaagcacctagctgtcc 237  Q
    |||||||  |||||||||||    
T  8877974 aaacaagtgcctagctgtcc 8877955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 13278236 - 13278123
Alignment:
Q  124 ttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaa 223  Q
    ||||||| ||||||||||| |||||||||| |    | | ||||||  |||||||| |||  |||||||||||||||| |||||||||||||| |||||     
T  13278236 ttgttgaccctagacgtagttacccagtggatgatgcacgttgggtagtgtggtgccttactgaagctaggaattaactggttagtaattaggaaaacag 13278137  T
Q  224 gcacctagctgtcc 237  Q
    |||||||| |||||    
T  13278136 gcacctagttgtcc 13278123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 9977425 - 9977372
Alignment:
Q  124 ttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggt 177  Q
    ||||||| |||||||||||||||| |  ||||||||||||||||||| ||||||    
T  9977425 ttgttgaccctagacgtaggtacctaacggctagaacccattgggtcgtgtggt 9977372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 237
Target Start/End: Complemental strand, 11803735 - 11803688
Alignment:
Q  190 ctaggaattaaccggttagtaattagggaaacaagcacctagctgtcc 237  Q
    |||||||||||  |||||||| |||||||||||||||| |||||||||    
T  11803735 ctaggaattaattggttagtatttagggaaacaagcacttagctgtcc 11803688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 18366313 - 18366352
Alignment:
Q  185 cgaagctaggaattaaccggttagtaattagggaaacaag 224  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  18366313 cgaacctaggaattaactggttagtaattagggaaacaag 18366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 20582939 - 20582877
Alignment:
Q  174 tggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctagctgtc 236  Q
    |||||| ||| |||| |||||||||||| |||||||||| ||||||||||   ||||||||||    
T  20582939 tggtgccttaccgaacctaggaattaactggttagtaataagggaaacaaatgcctagctgtc 20582877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 116 - 237
Target Start/End: Original strand, 24090250 - 24090371
Alignment:
Q  116 cataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattag 215  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||  ||||||||||||    
T  24090250 cataagagttgttaaccctagacataggtacccagtggctagaacccattgggtcgtgtggtgcattatcgaagctaggaattaactagttagtaattag 24090349  T
Q  216 ggaaacaagcacctagctgtcc 237  Q
    |||||||||||||||| |||||    
T  24090350 ggaaacaagcacctagttgtcc 24090371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 25536626 - 25536517
Alignment:
Q  127 ttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagca 226  Q
    |||| ||| |||||||||||| |||| ||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  25536626 ttgaccctcgacgtaggtacctagtgactagaacccattgggtcgtgtggtgcattaccgaagctaggaattaacaggttagtaattagggaaacaagca 25536527  T
Q  227 cctagctgtc 236  Q
    |||| |||||    
T  25536526 cctaactgtc 25536517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 25531275 - 25531163
Alignment:
Q  124 ttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaa 223  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||| |||||||||||| | ||||||||||||||| |||||||||||||| || |||    
T  25531275 ttgttgaccctagacgtaggtacccagtggctagaactcattaggtcgtgtggtgcattacccaagctaggaattaacaggttagtaattaggtaagcaa 25531176  T
Q  224 gcacctagctgtc 236  Q
    ||||||| |||||    
T  25531175 gcacctaactgtc 25531163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 17198633 - 17198523
Alignment:
Q  127 ttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagca 226  Q
    |||| |||||||||||||||| ||||||||||||||||| | || |||||||||||| |||||||||| ||||||  ||||||||||| |||||||||||    
T  17198633 ttgaccctagacgtaggtacctagtggctagaacccatttgatcgtgtggtgcattaccgaagctaggtattaactagttagtaattatggaaacaagca 17198534  T
Q  227 cctagctgtcc 237  Q
    |||||||||||    
T  17198533 cctagctgtcc 17198523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 25921359 - 25921245
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||| || ||||||| |||||| ||||||||||| |||||||||||||||||||| ||||||| |||| ||||||||||||||| | ||||||||||||    
T  25921359 ccataggatttgttgaccctagatgtaggtacccaatggctagaacccattgggtcgtgtggtgaattaccgaagctaggaattacctggttagtaatta 25921260  T
Q  215 gggaaacaagcaccta 230  Q
    ||| ||||||||||||    
T  25921259 ggg-aacaagcaccta 25921245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 18121620 - 18121698
Alignment:
Q  159 acccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctagctgtcc 237  Q
    |||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  18121620 acccattgggtcgtgtggtgcattaccgaagctaggaattaactggttagtaattagggaaacaagtgcctagctgtcc 18121698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 26668068 - 26667963
Alignment:
Q  132 cctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctag 231  Q
    |||||||||||||| ||| ||| |   |||||||||||| ||||||||||||| ||||||||||||||||  |||||||||||||| |||||| ||||||    
T  26668068 cctagacgtaggtatccaatggatgatacccattgggtcgtgtggtgcattagtgaagctaggaattaactagttagtaattagggtaacaagtacctag 26667969  T
Q  232 ctgtcc 237  Q
    ||||||    
T  26667968 ctgtcc 26667963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 25536010 - 25535935
Alignment:
Q  155 tagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcaccta 230  Q
    |||||||||||||||| ||||||||||||   ||||||||||||||  |||||||||||| |||||||||||||||    
T  25536010 tagaacccattgggtcgtgtggtgcattactaaagctaggaattaattggttagtaattaaggaaacaagcaccta 25535935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 25536304 - 25536222
Alignment:
Q  155 tagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctagctgtcc 237  Q
    |||||||||||||||| ||||||||||||  ||||||||||||||   ||||||| |||| ||||||||||||||| ||||||    
T  25536304 tagaacccattgggtcgtgtggtgcattactgaagctaggaattagttggttagttattaaggaaacaagcacctaactgtcc 25536222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 22378844 - 22378964
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||| || ||||||| ||||||||||||||| || ||| |    ||||||| |||  || |||| ||| |||| ||| |||||||| ||||||||||||    
T  22378844 ccataggaattgttgaccctagacgtaggtactcaatggatgatgcccattgagtcgagtagtgccttaccgaacctatgaattaactggttagtaatta 22378943  T
Q  215 gggaaacaagcacctagctgt 235  Q
    || |||||| |||||| ||||    
T  22378944 ggtaaacaaacacctaactgt 22378964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 236
Target Start/End: Complemental strand, 29143645 - 29143569
Alignment:
Q  160 cccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctagctgtc 236  Q
    ||||||| |||  ||||||| |||  ||| ||||||||||||  ||||||||| |||||||||| ||||||||||||    
T  29143645 cccattgagtctggtggtgccttactgaacctaggaattaactagttagtaatcagggaaacaaacacctagctgtc 29143569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 26831680 - 26831801
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| |||||| ||||| | ||||||||||||||| ||||||||||||    
T  26831680 ccataagaattgttgaccctagacgtaggtacccaatggctagaacccattgggtcgtgtggtacattaacaaagctaggaattaactggttagtaatta 26831779  T
Q  215 gggaaacaagcacctagctgtc 236  Q
    ||||||||||||||||| ||||    
T  26831780 gggaaacaagcacctagatgtc 26831801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 17997298 - 17997176
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||| || ||||||| |||||||||||| | |||||||||| ||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||||    
T  17997298 ccataggaattgttgaccctagacgtaggcatccagtggctaaaacccattgggtcgtgtggtgcattacagaagctaggaattaactggttagtaatta 17997199  T
Q  215 gggaaacaagcacctagctgtcc 237  Q
    ||||| |||||||||||||||||    
T  17997198 gggaagcaagcacctagctgtcc 17997176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 115 - 237
Target Start/End: Original strand, 23892523 - 23892645
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    |||||||| ||||||| ||||||||||| |||| |||||||||||| ||||||||| |||||||||||| |||||||||||||||||  |||||||||||    
T  23892523 ccataagaattgttgaccctagacgtagatacctagtggctagaacacattgggtcgtgtggtgcattaccgaagctaggaattaactagttagtaatta 23892622  T
Q  215 gggaaacaagcacctagctgtcc 237  Q
    | |||||||||||||| ||||||    
T  23892623 gagaaacaagcacctaactgtcc 23892645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 26138913 - 26138801
Alignment:
Q  124 ttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaa 223  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| ||||| | ||||||||||||||| ||||||||||||| |||||||    
T  26138913 ttgttgaccctagacgtaggtacccagtggctagaaccctttgggtcgtgtggtacattaccaaagctaggaattaactggttagtaattagagaaacaa 26138814  T
Q  224 gcacctagctgtc 236  Q
    |||||||| ||||    
T  26138813 gcacctagttgtc 26138801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 18524842 - 18524761
Alignment:
Q  15 agtttttgcttagatccaaagctgtttaggtatcttatgattcatctcaatacattttggtgttatgtcgtttggtgtttgt 96  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18524842 agtttttgcttagatccgaagctgtttaggtatcttatgattcatctcaatgcattttggtgttatgtcgtttggtgtttgt 18524761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 24722956 - 24723069
Alignment:
Q  124 ttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaa 223  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||  ||||||| ||| ||||||||||||||| |  ||||||||||||||||||||    
T  24722956 ttgttgaccctagacgtagatacccagtggctagaacccattgggtcgggtggtgccttaccgaagctaggaattacctagttagtaattagggaaacaa 24723055  T
Q  224 gcacctagctgtcc 237  Q
    |||||||| |||||    
T  24723056 gcacctagatgtcc 24723069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 18569619 - 18569514
Alignment:
Q  132 cctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctag 231  Q
    |||||||||||||| ||||||| |   |||||||||||| |||||||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||    
T  18569619 cctagacgtaggtatccagtggatgatacccattgggtcgtgtggtgcattaccgaagctaggaattaattggttagtaatcagggaaacaagcacctag 18569520  T
Q  232 ctgtcc 237  Q
    ||||||    
T  18569519 ctgtcc 18569514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 19264821 - 19264701
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||| || ||||||| |||||| ||||||||||||||||||||||||||||| || |||||||||||| ||||| |||||| |||  ||||||||||||    
T  19264821 ccataggaattgttgaccctagatgtaggtacccagtggctagaacccattggatcgtgtggtgcattatcgaagttaggaa-taagtggttagtaatta 19264723  T
Q  215 gggaaacaagcacctagctgtc 236  Q
    |||| |||||||||||| ||||    
T  19264722 gggatacaagcacctagttgtc 19264701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 17509979 - 17509857
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||| || ||||||| ||||||||||||||| || || ||| |||||||||  ||| ||||||  ||| |||| |||||||||||| ||||||||||||    
T  17509979 ccatatgaattgttgaccctagacgtaggtactcaatgtctaaaacccattgaatcaggtggtgtcttaccgaacctaggaattaactggttagtaatta 17509880  T
Q  215 gggaaacaagcacctagctgtcc 237  Q
    |||||||||| ||||||||||||    
T  17509879 gggaaacaagtacctagctgtcc 17509857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 26887531 - 26887468
Alignment:
Q  160 cccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaa 223  Q
    ||||||| |||| ||||||| ||| |||| ||||| |||||| |||||||||||||||||||||    
T  26887531 cccattgagtcaggtggtgccttaccgaacctaggtattaactggttagtaattagggaaacaa 26887468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 28665548 - 28665426
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||||||| ||||  | |||||||||| ||||||||||||||||| ||||||||||||    
T  28665548 ccataagaattgttgaccctagacgtaggtacccaatggctagaacccatagggtagtatggtgcattaccgaagctaggaattaactggttagtaatta 28665449  T
Q  215 gggaaacaagcacctagctgtcc 237  Q
    ||||||||||||||||| |||||    
T  28665448 gggaaacaagcacctagttgtcc 28665426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 19007877 - 19007990
Alignment:
Q  124 ttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaa 223  Q
    ||||||| |||||||||||||||||||||| |   ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||  ||    
T  19007877 ttgttgaccctagacgtaggtacccagtggatgatacccattgggtcatgtggtgcattaccgaagctaggaattaactggttagtaattagggaagaaa 19007976  T
Q  224 gcacctagctgtcc 237  Q
    ||||||||||||||    
T  19007977 gcacctagctgtcc 19007990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 20859435 - 20859313
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    |||||||| ||||||| ||||||  |||||||| |||||||||||||||||||||| |||||||||||| ||||||||| ||||||  ||||| ||||||    
T  20859435 ccataagaattgttgaccctagatctaggtacctagtggctagaacccattgggtcgtgtggtgcattaccgaagctagaaattaagtggttattaatta 20859336  T
Q  215 gggaaacaagcacctagctgtcc 237  Q
    ||||||||||||||||| |||||    
T  20859335 gggaaacaagcacctagttgtcc 20859313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 20549041 - 20549149
Alignment:
Q  127 ttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagca 226  Q
    |||| |||||||||||||||||| ||| |   ||||||| |||| |||||||||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  20549041 ttgaccctagacgtaggtacccaatggatgatacccattaggtcgtgtggtgcattatcgaagctaggaattaattggttagtaattagggaaacaagca 20549140  T
Q  227 cctagctgt 235  Q
     ||||||||    
T  20549141 tctagctgt 20549149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 127 - 237
Target Start/End: Original strand, 20563453 - 20563563
Alignment:
Q  127 ttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagca 226  Q
    |||| |||||||||||||||||| ||| |   ||| |||||||| ||| ||||| || ||||||||||||||||| |||||||||||| || ||||||||    
T  20563453 ttgaccctagacgtaggtacccaatggatgatacctattgggtcttgtagtgcaataccgaagctaggaattaactggttagtaattacgggaacaagca 20563552  T
Q  227 cctagctgtcc 237  Q
    |||||||||||    
T  20563553 cctagctgtcc 20563563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 24141222 - 24141100
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||| || ||||||| |||||  |||||||||||||| ||||||    ||||||| |||| ||||||| |||| | | |||||||| ||||||||||||    
T  24141222 ccataggaattgttgaccctaggtgtaggtacccagtgactagaaattgttgggtcgtgtgttgcattaccgaacccaagaattaactggttagtaatta 24141123  T
Q  215 gggaaacaagcacctagctgtcc 237  Q
    | |||||||||||||||||||||    
T  24141122 gcgaaacaagcacctagctgtcc 24141100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 16522896 - 16523003
Alignment:
Q  125 tgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaag 224  Q
    |||||| | |||||||||||||||||||||||||||||||||| ||     |||||| | ||||||||||||||||| ||||||||  ||| ||||||||    
T  16522896 tgttgaccttagacgtaggtacccagtggctagaacccattggttc-----gtgcatcaccgaagctaggaattaactggttagtatatagtgaaacaag 16522990  T
Q  225 cacctagctgtcc 237  Q
     |||||| |||||    
T  16522991 aacctagttgtcc 16523003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 20314848 - 20314929
Alignment:
Q  155 tagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctagctgtc 236  Q
    |||| ||||||| |||| ||||||| |||  ||| |||||||||||| ||||||||||||||||||||||||||||| ||||    
T  20314848 tagatcccattgagtcaggtggtgccttacggaaactaggaattaactggttagtaattagggaaacaagcacctagttgtc 20314929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 24659409 - 24659460
Alignment:
Q  185 cgaagctaggaattaaccggttagtaattagggaaacaagcacctagctgtc 236  Q
    |||| |||||||||||| ||||||||||||||||| ||||||||||||||||    
T  24659409 cgaacctaggaattaactggttagtaattagggaaccaagcacctagctgtc 24659460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 34129319 - 34129257
Alignment:
Q  175 ggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctagctgtcc 237  Q
    ||||| ||| |||||||||| |||||| ||||||||||||||||||||||  |||||||||||    
T  34129319 ggtgccttaccgaagctagggattaactggttagtaattagggaaacaagtgcctagctgtcc 34129257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 16523531 - 16523570
Alignment:
Q  140 taggtacccagtggctagaacccattgggtcatgtggtgc 179  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  16523531 taggtacccagtggctaaaacccattgggtcaggtggtgc 16523570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 20859043 - 20859004
Alignment:
Q  140 taggtacccagtggctagaacccattgggtcatgtggtgc 179  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  20859043 taggtacccagtggctaaaacccattgggtcaggtggtgc 20859004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 19532632 - 19532520
Alignment:
Q  124 ttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaa 223  Q
    ||||||| |||||||||||||||||||||||||||||| ||| |||| |||||||||||| ||||||| ||||||||| |||||||||||||| ||||||    
T  19532632 ttgttgaccctagacgtaggtacccagtggctagaaccaattaggtcgtgtggtgcattaccgaagcttggaattaactggttagtaattaggtaaacaa 19532533  T
Q  224 gcacctagctgtc 236  Q
    |||||||||||||    
T  19532532 gcacctagctgtc 19532520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 115 - 237
Target Start/End: Original strand, 20022899 - 20023021
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||| || ||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||| ||||||||||| ||||||||||||    
T  20022899 ccataggaattgttgaccctagacgtaggtacccagtggctagaacccgttgggtcgtgtggtgcattaccgaagttaggaattaactggttagtaatta 20022998  T
Q  215 gggaaacaagcacctagctgtcc 237  Q
    | |||||||||||| || |||||    
T  20022999 gcgaaacaagcacccagttgtcc 20023021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 115 - 236
Target Start/End: Original strand, 8882442 - 8882563
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||| || ||||||| |||||||||||||||||||||||||||| || | ||||| |||||||||||| |||||||| |||||||| ||||||||||||    
T  8882442 ccataggaattgttgaccctagacgtaggtacccagtggctagaatccttcgggtcgtgtggtgcattaccgaagctaagaattaactggttagtaatta 8882541  T
Q  215 gggaaacaagcacctagctgtc 236  Q
    ||||||  ||||||||||||||    
T  8882542 gggaaatgagcacctagctgtc 8882563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 16229362 - 16229464
Alignment:
Q  135 agacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctagctg 234  Q
    ||||||| ||||| |||||||||||| ||||||||| |||  ||||||| |||||||||||||||||  |||||||| ||||||||||| ||||||||||    
T  16229362 agacgtatgtacctagtggctagaactcattgggtcgtgtattgcattaccgaagctaggaattaactagttagtaactagggaaacaaacacctagctg 16229461  T
Q  235 tcc 237  Q
    |||    
T  16229462 tcc 16229464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 8170626 - 8170514
Alignment:
Q  127 ttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggt--gcattagcgaagctaggaattaaccggttagtaattagggaaacaag 224  Q
    |||| ||||||||||||||||||||||     |||||||||||| ||||||  |||| | |||| |||||||||||| ||||||||||||||||||||||    
T  8170626 ttgaccctagacgtaggtacccagtggacgatacccattgggtcgtgtggtacgcatgaccgaatctaggaattaactggttagtaattagggaaacaag 8170527  T
Q  225 cacctagctgtcc 237  Q
    |||||||||||||    
T  8170526 cacctagctgtcc 8170514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 19575557 - 19575670
Alignment:
Q  124 ttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaa 223  Q
    ||||||| |||||||||||||||||||||| |   |||||||||||| ||||||| |||| | |||||||||||||||  |||||||||| |||||||||    
T  19575557 ttgttgaccctagacgtaggtacccagtggatgatacccattgggtcgtgtggtggattacctaagctaggaattaactagttagtaatttgggaaacaa 19575656  T
Q  224 gcacctagctgtcc 237  Q
     ||||||| |||||    
T  19575657 acacctagttgtcc 19575670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 20122306 - 20122411
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||| || ||||||| | |||||||||| || ||||||||| |||||| | ||||| ||||||| |||  ||| |||||||||||  ||||||||||||    
T  20122306 ccataggaattgttgaccatagacgtaggaactcagtggctaaaacccacttggtcaggtggtgccttacggaacctaggaattaattggttagtaatta 20122405  T
Q  215 gggaaa 220  Q
    ||||||    
T  20122406 gggaaa 20122411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 19168124 - 19168070
Alignment:
Q  176 gtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcaccta 230  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||||||| ||||||    
T  19168124 gtgcattaccgaagttaggaattaactggttagtaattagggaaacaaacaccta 19168070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 4657754 - 4657690
Alignment:
Q  173 gtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctagctgtcc 237  Q
    ||||||| |||  ||| ||| ||||||||  |||||||||||||||||||| |||||||||||||    
T  4657754 gtggtgccttactgaacctatgaattaacttgttagtaattagggaaacaatcacctagctgtcc 4657690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 25095418 - 25095305
Alignment:
Q  124 ttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaa 223  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||||| |||||||||||| |||| |||||||||||  ||| | |||||||||||||||    
T  25095418 ttgttgaccctagacttaggtacccaatggctagaacccattgggtcgtgtggtgcattaccgaatctaggaattaattggtcaataattagggaaacaa 25095319  T
Q  224 gcacctagctgtcc 237  Q
    |||||||| |||||    
T  25095318 gcacctagttgtcc 25095305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 115 - 237
Target Start/End: Original strand, 17025668 - 17025790
Alignment:
Q  115 ccataagagttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaatta 214  Q
    ||||| || ||||||| |||||||||||||||||||||| |   |||||||||||| ||||||| |||| | ||||||| ||||||| ||||||||||||    
T  17025668 ccataggaattgttgaccctagacgtaggtacccagtggatgatacccattgggtcgtgtggtgaattacctaagctagaaattaactggttagtaatta 17025767  T
Q  215 gggaaacaagcacctagctgtcc 237  Q
    ||||||  ||||||||| |||||    
T  17025768 gggaaaagagcacctagatgtcc 17025790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 11253132 - 11253184
Alignment:
Q  185 cgaagctaggaattaaccggttagtaattagggaaacaagcacctagctgtcc 237  Q
    |||||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  11253132 cgaagctaagaattaactggttcgtaattagggaaacaagcacctagctgtcc 11253184  T

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Target: scaffold0034 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 143 - 231
Target Start/End: Complemental strand, 77166 - 77078
Alignment:
Q  143 gtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaagcacctag 231  Q
    |||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  77166 gtacccagtggctagaacccattgggtcgtgcggtgcattaccgaagctaggaattaactggttactaattagggaaacaagcacctag 77078  T

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Target: scaffold0671 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 1210 - 1103
Alignment:
Q  124 ttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaa 223  Q
    ||||||| ||||||  ||||||||||||||||||||| ||||| ||| |||||||||||| ||||| ||| |||||||  ||||||||||||||||||||    
T  1210 ttgttgaccctagaaataggtacccagtggctagaactcattgagtcgtgtggtgcattaccgaagttagtaattaactagttagtaattagggaaacaa 1111  T
Q  224 gcacctag 231  Q
    ||||||||    
T  1110 gcacctag 1103  T

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Target: scaffold0056 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 22044 - 21931
Alignment:
Q  124 ttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaa 223  Q
    |||||||  |||||||||||| || ||||||||||||||||| ||| | ||||||| ||| |||| |||||||||||| ||| |||||||||||||||||    
T  22044 ttgttgacgctagacgtaggttcctagtggctagaacccattaggttaggtggtgccttaccgaacctaggaattaactggtaagtaattagggaaacaa 21945  T
Q  224 gcacctagctgtcc 237  Q
    ||||||| ||||||    
T  21944 gcacctaactgtcc 21931  T

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Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 234922 - 234816
Alignment:
Q  124 ttgttgaacctagacgtaggtacccagtggctagaacccattgggtcatgtggtgcattagcgaagctaggaattaaccggttagtaattagggaaacaa 223  Q
    ||||||| | |||||||||||||| ||||| |   | ||| |||||| ||||||||||||  ||||  ||||| |||| |||||||||||||||||||||    
T  234922 ttgttgaccttagacgtaggtacctagtggatgatatccactgggtcgtgtggtgcattacggaaggaaggaaataactggttagtaattagggaaacaa 234823  T
Q  224 gcaccta 230  Q
    |||||||    
T  234822 gcaccta 234816  T

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