View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17949_low_10 (Length: 236)
Name: NF17949_low_10
Description: NF17949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17949_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 41062442 - 41062611
Alignment:
| Q |
1 |
tattatctttttaataatacttacttaccttctgcctctccctaatcaactttctattctagggccaaattcttacctcaattctagctttatggacagc |
100 |
Q |
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| T |
41062442 |
tattatctttttaataatacttacttaccttctgcctctccctaatcaactttctattctagggccaaattcttacctcaattctagctttatggacagc |
41062541 |
T |
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| Q |
101 |
tcttccacacaaggaacttgacgctaaggtacctacctacatttatttatatcttttgtgtgcgtagcat |
170 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
41062542 |
tcttccacacaaggaacttgacgctaaggtacctacctacatttatttatatcttttgtgtgcttagcat |
41062611 |
T |
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