View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17952_high_28 (Length: 245)

Name: NF17952_high_28
Description: NF17952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17952_high_28
NF17952_high_28
[»] chr5 (29 HSPs)
chr5 (102-245)||(40255599-40255736)
chr5 (109-245)||(36486422-36486552)
chr5 (137-245)||(33160243-33160350)
chr5 (143-245)||(28538713-28538815)
chr5 (109-245)||(28539754-28539884)
chr5 (102-245)||(19752948-19753086)
chr5 (139-241)||(36485341-36485443)
chr5 (102-245)||(18486828-18486966)
chr5 (102-245)||(24332950-24333087)
chr5 (102-245)||(25523106-25523244)
chr5 (182-245)||(25056382-25056445)
chr5 (179-245)||(19754128-19754194)
chr5 (152-241)||(25524069-25524158)
chr5 (192-245)||(33158135-33158188)
chr5 (153-245)||(16650827-16650919)
chr5 (139-218)||(1797255-1797334)
chr5 (178-245)||(5777936-5778003)
chr5 (150-213)||(36221062-36221125)
chr5 (151-245)||(22940593-22940686)
chr5 (187-245)||(25055449-25055507)
chr5 (152-245)||(2686372-2686465)
chr5 (151-244)||(42195170-42195263)
chr5 (160-239)||(21835083-21835162)
chr5 (151-245)||(5778806-5778900)
chr5 (151-231)||(16650043-16650123)
chr5 (151-241)||(5730832-5730922)
chr5 (187-245)||(7311627-7311685)
chr5 (155-241)||(18154535-18154619)
chr5 (202-240)||(25524148-25524186)
[»] chr2 (27 HSPs)
chr2 (142-244)||(41878132-41878234)
chr2 (102-245)||(38840420-38840557)
chr2 (102-245)||(38839279-38839416)
chr2 (137-245)||(7899838-7899946)
chr2 (102-245)||(41879139-41879276)
chr2 (102-245)||(7898728-7898865)
chr2 (137-245)||(36449815-36449923)
chr2 (137-245)||(36450877-36450985)
chr2 (151-245)||(11258781-11258875)
chr2 (102-223)||(22587559-22587674)
chr2 (102-245)||(22587881-22588017)
chr2 (152-230)||(11257673-11257751)
chr2 (151-241)||(18299414-18299504)
chr2 (199-245)||(18300742-18300788)
chr2 (102-245)||(22848228-22848366)
chr2 (157-245)||(23869511-23869599)
chr2 (139-245)||(8535613-8535720)
chr2 (152-245)||(18905959-18906051)
chr2 (187-245)||(18797284-18797342)
chr2 (187-245)||(28617959-28618016)
chr2 (189-223)||(32739710-32739744)
chr2 (152-213)||(1410069-1410130)
chr2 (152-241)||(8534623-8534711)
chr2 (151-244)||(26545491-26545584)
chr2 (200-245)||(32739660-32739705)
chr2 (205-245)||(13568009-13568049)
chr2 (187-243)||(18904406-18904462)
[»] chr1 (38 HSPs)
chr1 (137-245)||(39699723-39699831)
chr1 (152-245)||(24422837-24422930)
chr1 (152-245)||(52275005-52275098)
chr1 (138-241)||(39698604-39698706)
chr1 (151-245)||(24426045-24426139)
chr1 (102-245)||(36613830-36613968)
chr1 (137-245)||(45157165-45157273)
chr1 (152-245)||(43058822-43058915)
chr1 (137-242)||(44404482-44404587)
chr1 (102-245)||(39153043-39153180)
chr1 (137-245)||(44411922-44412030)
chr1 (137-245)||(45149926-45150035)
chr1 (137-245)||(39151968-39152076)
chr1 (137-245)||(45148618-45148725)
chr1 (137-245)||(14999321-14999426)
chr1 (151-245)||(7983086-7983180)
chr1 (152-240)||(43059977-43060065)
chr1 (151-244)||(51684404-51684497)
chr1 (151-240)||(52276133-52276222)
chr1 (152-244)||(35066973-35067065)
chr1 (150-245)||(11437168-11437263)
chr1 (151-245)||(41364865-41364959)
chr1 (151-241)||(43378683-43378773)
chr1 (151-245)||(52827384-52827478)
chr1 (152-245)||(37526849-37526941)
chr1 (152-245)||(50680368-50680461)
chr1 (137-245)||(14999911-15000019)
chr1 (151-242)||(35595162-35595253)
chr1 (178-245)||(33088614-33088681)
chr1 (138-241)||(45156090-45156193)
chr1 (151-245)||(52828040-52828134)
chr1 (144-245)||(33739130-33739231)
chr1 (174-245)||(23980459-23980530)
chr1 (143-229)||(40384778-40384864)
chr1 (152-224)||(30249461-30249533)
chr1 (152-245)||(39222444-39222537)
chr1 (151-208)||(46525771-46525827)
chr1 (187-244)||(51685771-51685828)
[»] chr3 (44 HSPs)
chr3 (142-245)||(7267680-7267783)
chr3 (109-245)||(54540724-54540854)
chr3 (137-245)||(7268783-7268891)
chr3 (151-245)||(8456514-8456608)
chr3 (137-245)||(19984886-19984994)
chr3 (102-244)||(49216285-49216421)
chr3 (138-245)||(55191952-55192059)
chr3 (102-245)||(12700210-12700348)
chr3 (102-244)||(22776739-22776875)
chr3 (151-245)||(7758439-7758533)
chr3 (152-245)||(29931263-29931356)
chr3 (152-245)||(29980417-29980510)
chr3 (139-240)||(52839079-52839180)
chr3 (186-245)||(534536-534595)
chr3 (151-245)||(6249646-6249739)
chr3 (151-245)||(29932669-29932762)
chr3 (151-245)||(29981823-29981916)
chr3 (179-240)||(12703498-12703559)
chr3 (188-245)||(24516497-24516554)
chr3 (150-245)||(52840573-52840668)
chr3 (151-245)||(47609734-47609828)
chr3 (151-245)||(47610550-47610644)
chr3 (179-245)||(47614222-47614288)
chr3 (151-245)||(51470009-51470103)
chr3 (109-245)||(54539792-54539922)
chr3 (143-218)||(4271504-4271579)
chr3 (102-245)||(19985997-19986136)
chr3 (164-245)||(6170309-6170388)
chr3 (102-167)||(49220479-49220538)
chr3 (194-244)||(51038803-51038853)
chr3 (188-245)||(34019152-34019209)
chr3 (151-244)||(46721190-46721283)
chr3 (187-243)||(8875945-8876001)
chr3 (152-244)||(11670422-11670514)
chr3 (151-241)||(23770377-23770467)
chr3 (137-214)||(49398194-49398271)
chr3 (151-245)||(51470425-51470519)
chr3 (139-245)||(55191548-55191653)
chr3 (153-218)||(18442695-18442760)
chr3 (153-218)||(19487769-19487834)
chr3 (187-244)||(51037573-51037630)
chr3 (145-241)||(31645014-31645110)
chr3 (152-212)||(47615548-47615608)
chr3 (200-244)||(53901407-53901451)
[»] chr4 (39 HSPs)
chr4 (137-245)||(8758793-8758901)
chr4 (139-244)||(35935491-35935596)
chr4 (137-241)||(8757715-8757818)
chr4 (139-245)||(31600943-31601049)
chr4 (109-245)||(31599826-31599956)
chr4 (137-245)||(52491563-52491671)
chr4 (137-245)||(35934379-35934487)
chr4 (151-245)||(19750545-19750639)
chr4 (151-245)||(19789167-19789261)
chr4 (155-245)||(26421597-26421686)
chr4 (102-245)||(1290124-1290262)
chr4 (102-232)||(10448187-10448311)
chr4 (151-245)||(5525396-5525490)
chr4 (187-245)||(12129660-12129718)
chr4 (151-245)||(25684971-25685065)
chr4 (139-244)||(21178034-21178139)
chr4 (151-244)||(37728535-37728628)
chr4 (152-231)||(8155788-8155867)
chr4 (151-245)||(13386052-13386147)
chr4 (178-245)||(48780285-48780352)
chr4 (187-245)||(1835108-1835166)
chr4 (151-245)||(5526096-5526190)
chr4 (151-245)||(10470583-10470677)
chr4 (151-245)||(10471358-10471452)
chr4 (151-245)||(25685792-25685886)
chr4 (143-244)||(50909634-50909736)
chr4 (152-240)||(46638696-46638784)
chr4 (151-241)||(1834160-1834251)
chr4 (150-240)||(1289139-1289229)
chr4 (151-245)||(13386502-13386596)
chr4 (199-245)||(49308045-49308091)
chr4 (150-211)||(8896880-8896940)
chr4 (152-245)||(17383029-17383122)
chr4 (152-245)||(17388182-17388275)
chr4 (177-244)||(1963234-1963301)
chr4 (137-244)||(10447045-10447152)
chr4 (151-244)||(13509329-13509422)
chr4 (188-245)||(21539078-21539135)
chr4 (187-244)||(27257966-27258023)
[»] chr8 (36 HSPs)
chr8 (102-244)||(12351959-12352095)
chr8 (102-245)||(12353288-12353424)
chr8 (142-245)||(29968298-29968401)
chr8 (137-241)||(18978060-18978164)
chr8 (137-244)||(24122920-24123027)
chr8 (137-245)||(45114473-45114580)
chr8 (139-245)||(11287813-11287919)
chr8 (138-241)||(18970951-18971054)
chr8 (138-245)||(18979077-18979184)
chr8 (158-245)||(32207302-32207389)
chr8 (152-245)||(1824049-1824142)
chr8 (152-245)||(1858494-1858587)
chr8 (102-245)||(10006381-10006519)
chr8 (102-245)||(10007689-10007827)
chr8 (187-245)||(22220425-22220483)
chr8 (152-244)||(11282046-11282138)
chr8 (137-228)||(45112923-45113014)
chr8 (187-245)||(1823589-1823647)
chr8 (187-245)||(1858034-1858092)
chr8 (187-245)||(22221370-22221428)
chr8 (187-245)||(22227712-22227770)
chr8 (152-241)||(5514022-5514111)
chr8 (142-245)||(24123859-24123962)
chr8 (142-223)||(40471107-40471189)
chr8 (151-244)||(8388500-8388593)
chr8 (164-209)||(11288871-11288916)
chr8 (151-223)||(24359866-24359938)
chr8 (188-219)||(2379931-2379962)
chr8 (144-239)||(29043441-29043536)
chr8 (152-218)||(23169962-23170028)
chr8 (151-245)||(30335676-30335770)
chr8 (152-218)||(34625171-34625237)
chr8 (152-213)||(11283180-11283241)
chr8 (164-245)||(24488663-24488743)
chr8 (151-244)||(43661793-43661886)
chr8 (152-212)||(11456679-11456739)
[»] scaffold0059 (2 HSPs)
scaffold0059 (102-245)||(3712-3849)
scaffold0059 (137-243)||(4686-4792)
[»] scaffold0302 (2 HSPs)
scaffold0302 (137-244)||(18732-18839)
scaffold0302 (137-245)||(17507-17615)
[»] chr6 (22 HSPs)
chr6 (137-245)||(1829559-1829667)
chr6 (137-245)||(14822397-14822505)
chr6 (137-245)||(14823531-14823639)
chr6 (137-245)||(16704453-16704561)
chr6 (137-245)||(10784630-10784739)
chr6 (137-245)||(26574656-26574763)
chr6 (137-245)||(26575010-26575118)
chr6 (142-244)||(10785874-10785976)
chr6 (151-245)||(3721649-3721743)
chr6 (102-245)||(7316220-7316358)
chr6 (151-230)||(5658808-5658887)
chr6 (151-245)||(8659302-8659396)
chr6 (178-245)||(8822790-8822857)
chr6 (151-245)||(8660174-8660267)
chr6 (137-213)||(29473146-29473222)
chr6 (178-245)||(8821910-8821977)
chr6 (102-245)||(7314917-7315054)
chr6 (152-241)||(17496838-17496928)
chr6 (151-245)||(34834549-34834643)
chr6 (151-244)||(6842253-6842346)
chr6 (151-244)||(27437866-27437959)
chr6 (164-244)||(3333186-3333266)
[»] chr7 (27 HSPs)
chr7 (152-241)||(31659664-31659753)
chr7 (137-245)||(14999111-14999219)
chr7 (137-227)||(34352742-34352832)
chr7 (143-244)||(42886248-42886349)
chr7 (102-245)||(22629523-22629661)
chr7 (152-245)||(7500491-7500584)
chr7 (152-245)||(18372428-18372521)
chr7 (152-245)||(18371461-18371554)
chr7 (137-245)||(34351529-34351633)
chr7 (151-245)||(3227144-3227238)
chr7 (151-245)||(31949359-31949453)
chr7 (152-245)||(7501823-7501916)
chr7 (152-245)||(22630423-22630516)
chr7 (152-245)||(47369818-47369911)
chr7 (137-211)||(770717-770791)
chr7 (151-245)||(3227564-3227658)
chr7 (151-245)||(17781698-17781792)
chr7 (138-214)||(14998048-14998124)
chr7 (178-244)||(128598-128664)
chr7 (151-245)||(6618244-6618338)
chr7 (151-245)||(31949772-31949866)
chr7 (187-245)||(17782559-17782617)
chr7 (151-245)||(47525337-47525431)
chr7 (139-243)||(11658418-11658523)
chr7 (163-244)||(31660991-31661072)
chr7 (152-237)||(46482642-46482727)
chr7 (142-245)||(48933704-48933805)
[»] scaffold0294 (1 HSPs)
scaffold0294 (151-245)||(5408-5502)
[»] scaffold0112 (1 HSPs)
scaffold0112 (151-244)||(37185-37278)
[»] scaffold0093 (2 HSPs)
scaffold0093 (151-245)||(2435-2529)
scaffold0093 (151-245)||(7058-7152)
[»] scaffold0019 (2 HSPs)
scaffold0019 (151-245)||(60127-60221)
scaffold0019 (151-245)||(61429-61523)
[»] scaffold0632 (1 HSPs)
scaffold0632 (137-241)||(3264-3368)
[»] scaffold0049 (1 HSPs)
scaffold0049 (160-239)||(7394-7473)
[»] scaffold0320 (1 HSPs)
scaffold0320 (152-245)||(19525-19618)
[»] scaffold2034 (1 HSPs)
scaffold2034 (102-244)||(271-407)
[»] scaffold1303 (1 HSPs)
scaffold1303 (151-245)||(1476-1570)
[»] scaffold0186 (1 HSPs)
scaffold0186 (139-245)||(23116-23222)
[»] scaffold0586 (1 HSPs)
scaffold0586 (186-232)||(6393-6439)
[»] scaffold0003 (1 HSPs)
scaffold0003 (151-244)||(49403-49496)


Alignment Details
Target: chr5 (Bit Score: 101; Significance: 4e-50; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 40255599 - 40255736
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||||||||||||||||||||||||||||||||      |||||||||||||||||||||| |||||||||||||||||||||| || ||||||||| ||    
T  40255599 aattaaataattacacacgtggcacgccacgta------ggcattgaccggtcaaaattgatcaaaaagattaaaattgcaatggggttaaatcttaggg 40255692  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  40255693 ggccaaaattgtagtttctgtatttagggggtcaaaattgcaag 40255736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 36486422 - 36486552
Alignment:
Q  109 taattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaa 208  Q
    ||||||||||||||||| ||||||||      ||||||||||||||||||||||| |||| ||| ||| |||||| | | |||||||||| ||| |||||    
T  36486422 taattacacacgtggcatgccacgta------ggcattgaccggtcaaaattgacaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaa 36486515  T
Q  209 attgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||| ||||||||||||||||||||||||||    
T  36486516 attgtagtttttgtacttagggggtcaaaattgcaag 36486552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 33160243 - 33160350
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    ||||||||||||||||||||||||| | |||| ||||||| |||||||| ||||||||||||||||| |||||||||||||||| |||||||||||  ||    
T  33160243 cgtaggcattgaccggtcaaaattggctaaaaggattaaagttgcaatg-ggctaaatcttaaggggtcaaaattgtagtttctatacttagggggctaa 33160341  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  33160342 aattgcaag 33160350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 245
Target Start/End: Complemental strand, 28538815 - 28538713
Alignment:
Q  143 cattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgc 242  Q
    ||||||||||||||||||||| |||| ||| ||| |||||| | |||||||||||| ||||| ||||||||||||| |||||||| ||||||||||||||    
T  28538815 cattgaccggtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggctaaaattgtagtttttgtacttaaggggtcaaaattgc 28538716  T
Q  243 aag 245  Q
    |||    
T  28538715 aag 28538713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 28539754 - 28539884
Alignment:
Q  109 taattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaa 208  Q
    ||||||||||||||||| ||||||||      ||||||||||||||||||||| | |||| ||| ||| |||||| | | |||||||||| ||| |||||    
T  28539754 taattacacacgtggcatgccacgta------ggcattgaccggtcaaaattggcaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaa 28539847  T
Q  209 attgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  28539848 attgtagtttttgtacttagagggtcaaaattgcaag 28539884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 19753086 - 19752948
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||||| ||||||||||||||||  ||||||||||||| |  | | |   ||||||||||||||||| ||  |||  ||||||| ||||||||| || ||    
T  19753086 aattaattaattacacacgtggcctgccacgtaggcgttg--aataa---gtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatcataggg 19752992  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||    
T  19752991 ggccaaaattgtagtttttgtacttagggggccaaaattgcaag 19752948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 241
Target Start/End: Complemental strand, 36485443 - 36485341
Alignment:
Q  139 taggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaa 238  Q
    ||||||||||||||||||||||||| |||| ||| ||| |||||| | || ||||||||| |||||||||||| |||||| |||||||| | ||||||||    
T  36485443 taggcattgaccggtcaaaattgacaaaaatgatcaaagttgcaaaggggttaaatcttagggggccaaaattatagtttttgtacttaagaggtcaaaa 36485344  T
Q  239 ttg 241  Q
    |||    
T  36485343 ttg 36485341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 18486828 - 18486966
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||||| ||||||||||||||||  ||||||||||||| |  | | |   ||||||||||||||||| ||  |||  ||||| | |||||||||||| ||    
T  18486828 aattaattaattacacacgtggcctgccacgtaggcgttg--aataa---gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggg 18486922  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| |||||| ||||||||||| ||||||||||||    
T  18486923 ggccaaaattgtggtttctatacttagggggccaaaattgcaag 18486966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 24333087 - 24332950
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||| ||||||||||||||||||| |||||||||||      |||||| |||||||||||||||||| ||  |||  ||||| | || |||||||||  |    
T  24333087 aatttaataattacacacgtggcatgccacgtaggc------attgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagag 24332994  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    || |||||||||||||| ||||| || |||| ||||||||||||    
T  24332993 ggtcaaaattgtagtttttgtacataaggggccaaaattgcaag 24332950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 25523244 - 25523106
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||||| ||||||||||||||||| ||||||||||||| |  ||  |    |||||||||| ||||| ||| |||  ||||| | |||||||||||| ||    
T  25523244 aattaattaattacacacgtggcaggccacgtaggcgttga-ataaa----tcaaaattgatcaaaaggatcaaagatgcaaaggggctaaatcttaggg 25523150  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    || |||||||||||||| |||||||||||||  |||||||||||    
T  25523149 ggtcaaaattgtagtttttgtacttagggggctaaaattgcaag 25523106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 25056382 - 25056445
Alignment:
Q  182 aatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| |||| ||||||||||||||   ||||||||||||||||||||||||    
T  25056382 aatgaggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaag 25056445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 19754128 - 19754194
Alignment:
Q  179 tgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||| ||||||||| || ||||||||||||||||||| |||| |||||||| ||||||||||||    
T  19754128 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtatttagggggccaaaattgcaag 19754194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 241
Target Start/End: Original strand, 25524069 - 25524158
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    ||||||||||||||||| || ||||  ||||| | |||||||||||| |||| ||||||| |||||| |||||||||| || ||||||||    
T  25524069 gtcaaaattgaccaaaaggactaaagatgcaaaggggctaaatcttagggggtcaaaattatagtttttgtacttaggaggccaaaattg 25524158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 33158188 - 33158135
Alignment:
Q  192 aatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  33158188 aatcttaaggggtcaaaattgtagtttttgtacttagggtgtcaaaattgcaag 33158135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 16650827 - 16650919
Alignment:
Q  153 tcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||||||| ||  |||  |||||   ||||||| |||| ||||| ||||||||||||| | ||||||||||||||||||||||||    
T  16650827 tcaaaattgaccaaaaggaccaaagatgcaaatgggctaaaccttagggggctaaaattgtagtttttatacttagggggtcaaaattgcaag 16650919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 218
Target Start/End: Original strand, 1797255 - 1797334
Alignment:
Q  139 taggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagttt 218  Q
    ||||||||||||||||||||||||  |||   || ||| |||||| | |||||||||||||||| |||||||||||||||    
T  1797255 taggcattgaccggtcaaaattgaaaaaaggaatcaaagttgcaaaggggctaaatcttaagggaccaaaattgtagttt 1797334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 5778003 - 5777936
Alignment:
Q  178 ttgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||| |||||||||||| |||| | ||||||| ||||  |||||||||||||||||||||||||    
T  5778003 ttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaag 5777936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 36221125 - 36221062
Alignment:
Q  150 cggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgt 213  Q
    ||||||||||||| ||||| ||| ||| ||||||||||||||||||||| |||| |||||||||    
T  36221125 cggtcaaaattgatcaaaatgatgaaatttgcaatgaggctaaatcttagggggacaaaattgt 36221062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 22940593 - 22940686
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||||||||| ||| |||  || || | |||||||| ||| |||| |||||||||| ||| ||||||||||||| ||||||||||||    
T  22940593 ggtcaaaattgaccaaaaggataaaagatgaaaaggggctaaatttta-ggggtcaaaattgtaatttttgtacttagggggccaaaattgcaag 22940686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 25055507 - 25055449
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||||||||||||||||| | ||| |||||| |||||||||||||    
T  25055507 ggctaaatcttagggggccaaaattgtagtttttatacataggggatcaaaattgcaag 25055449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 2686372 - 2686465
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||| ||||| ||  |||  ||||||||||||||||| || ||| |||||||| |||||| |||||||| | | |||||||||||||    
T  2686372 gtcaaaattgatcaaaaggaccaaagatgcaatgaggctaaatcataggggaccaaaattatagtttttgtacttaagagatcaaaattgcaag 2686465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 42195263 - 42195170
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    |||||||||||||||||| ||  |||  ||||| | |||||||||||| ||| |||||||||||| || ||||| ||||||| |||||| ||||    
T  42195263 ggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtagattttgtacatagggggccaaaatcgcaa 42195170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 21835162 - 21835083
Alignment:
Q  160 tgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaat 239  Q
    |||| |||| ||| ||| |||||| | || ||||||||| |||| |||||||||||||| ||||| ||||||||||||||    
T  21835162 tgactaaaaggatcaaagttgcaaaggggttaaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaat 21835083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 5778806 - 5778900
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||  ||| |||||||| |||||||||||| |||| | ||||||| ||||  ||||||||||||  |||||||||||    
T  5778806 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggcaaaaattgcaag 5778900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 231
Target Start/End: Complemental strand, 16650123 - 16650043
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggg 231  Q
    |||||||||||||||||| ||  |||  ||||| | || |||||||||  ||| |||||||||||||| ||||||||||||    
T  16650123 ggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacttagggg 16650043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 5730832 - 5730922
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    |||||||||||| |||||  |  ||| |||||||| || ||||||||| |||| | ||||||| ||||  |||||||||||| ||||||||    
T  5730832 ggtcaaaattgatcaaaagaaccaaagttgcaatggggttaaatcttagggggactaaattgtggttttggtacttagggggccaaaattg 5730922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 7311685 - 7311627
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||| ||||||||||||| ||||||| || || ||| ||||||||    
T  7311685 ggctaaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaag 7311627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 18154619 - 18154535
Alignment:
Q  155 aaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    |||||||| ||||| ||| ||| ||||||||  ||||||| |||  |||| ||||||||||||| |||||||| |||||||||||||    
T  18154619 aaaattgagcaaaatgatcaaatttgcaatggagctaaattttagagggc-aaaattgtagtttttgtactta-ggggtcaaaattg 18154535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 25524148 - 25524186
Alignment:
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaatt 240  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  25524148 ggccaaaattgtagtttttgtacttagggggccaaaatt 25524186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 1e-46; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 142 - 244
Target Start/End: Complemental strand, 41878234 - 41878132
Alignment:
Q  142 gcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41878234 gcattgaccggtcaaaattgaccaaaaagattaaaattgcaatggggctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattg 41878135  T
Q  242 caa 244  Q
    |||    
T  41878134 caa 41878132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 38840420 - 38840557
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    ||||||||||||||||||||||||||||      ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||| ||    
T  38840420 aattaaataattacacacgtggcacgcc------gcgtaggcattgaccggtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttaggg 38840513  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||| ||||||||||||| |||||||||||||  |||||||||||    
T  38840514 ggctaaaattgtagtttttgtacttagggggctaaaattgcaag 38840557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 38839416 - 38839279
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    ||||||||||||||||| ||||||||||||||| ||      |||||| |||||||||||||||||| |||||||||||||||| |||||||||||| ||    
T  38839416 aattaaataattacacaagtggcacgccacgtaagc------attgacgggtcaaaattgaccaaaatgattaaaattgcaatggggctaaatcttaggg 38839323  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| |||| ||||||||  |||||||||||    
T  38839322 ggccaaaattgtagtttttgtagttagggggctaaaattgcaag 38839279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 7899838 - 7899946
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||| ||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||| ||||||||||||||||||||||||||  |||    
T  7899838 cgtatgcattgaccggtcaaaattgaccaaaaagattaaagttacaatggggctaaatcttagggggctaaaattgtagtttctgtacttaggggaccaa 7899937  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  7899938 aattgcaag 7899946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 41879139 - 41879276
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||||||||||||||||||||||||||||||||      ||||||||| |||||||||||| ||||| ||||||||||||||||  ||||||| ||| ||    
T  41879139 aattaaataattacacacgtggcacgccacgta------ggcattgactggtcaaaattgatcaaaatgattaaaattgcaatggtgctaaattttaggg 41879232  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||  ||||||||||||| ||||||||||||| ||||||||||||    
T  41879233 ggttaaaattgtagtttatgtacttagggggccaaaattgcaag 41879276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 7898865 - 7898728
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||| ||||||||||||||||||| |||||||| ||      |||||| |||||||||||| ||||| |||||||||||||||| |||||||||||| ||    
T  7898865 aatttaataattacacacgtggcatgccacgtaagc------attgactggtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttaggg 7898772  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||||| |||||||| ||  |||||||||||    
T  7898771 ggccaaaattgtagtttctatacttaggaggcaaaaattgcaag 7898728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 36449923 - 36449815
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||||||||||||||||||||||||  ||||| ||| |||||||||| | | |||| ||||  |||| |||||||||||||| ||||||||||||| |||    
T  36449923 cgtaggcattgaccggtcaaaattggtcaaaaggatcaaaattgcaaagggcctaattcttgggggggcaaaattgtagtttttgtacttagggggccaa 36449824  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  36449823 aattgcaag 36449815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 36450877 - 36450985
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||||||||||||| |||||||||| |||||| ||| |||||||||| |  ||||| ||||  |||||| |||||||||||||||||||||||||  |||    
T  36450877 cgtaggcattgaccagtcaaaattggccaaaaggatcaaaattgcaaaggagctaattcttggggggccgaaattgtagtttctgtacttaggggaccaa 36450976  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  36450977 aattgcaag 36450985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 11258781 - 11258875
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||||||||| ||| |||  ||||||| |||||||||||| ||| | ||||||||||||| ||||||||||||| ||||||||||||    
T  11258781 ggtcaaaattgaccaaaaggatcaaatctgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaag 11258875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 223
Target Start/End: Complemental strand, 22587674 - 22587559
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||||||||||||||||||||||| |||| ||||||      |||||| ||||||||||| |||||| ||  |||  ||||| |||||||||||||| ||    
T  22587674 aattaaataattacacacgtggcatgccatgtaggc------attgactggtcaaaattggccaaaaggaccaaagatgcaaagaggctaaatcttaggg 22587581  T
Q  202 ggccaaaattgtagtttctgta 223  Q
    ||||||||||||||||| ||||    
T  22587580 ggccaaaattgtagtttttgta 22587559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 22587881 - 22588017
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||||||||| ||||||||||||| ||||| ||| |||      |||| |||| |||||| |||||| ||  |||  ||||| | |||||||||||||||    
T  22587881 aattaaataaatacacacgtggcatgccacatagacgt------tgactggtcgaaattggccaaaaggaccaaagatgcaaaggggctaaatcttaagg 22587974  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| ||||| || |||| ||||||||||||    
T  22587975 ggccaaaattgtagtttttgtacata-ggggccaaaattgcaag 22588017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 11257751 - 11257673
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttaggg 230  Q
    ||||||||||| ||||| ||| ||| |||||||| |||||||||||| | ||||||||||||||||| | |||||||||    
T  11257751 gtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggaggccaaaattgtagtttttatacttaggg 11257673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 18299504 - 18299414
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    |||||||||||||||||| ||| |||  |||||   ||||||||| || ||||||||||||||||||| | |||||||| || ||||||||    
T  18299504 ggtcaaaattgaccaaaaggatcaaagatgcaaaagggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaaattg 18299414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 18300742 - 18300788
Alignment:
Q  199 aggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||    
T  18300742 aggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaag 18300788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 22848366 - 22848228
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||||| ||||||||||||||||  ||||||||||||| |  | | |   ||||||||||| ||||| ||  |||  ||||| | |||||||||||| ||    
T  22848366 aattaattaattacacacgtggcttgccacgtaggcgttg--aataa---gtcaaaattgatcaaaaggaccaaagctgcaaaggggctaaatcttaggg 22848272  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
     |||||||||||||||| |||| |||||||  ||||||||||||    
T  22848271 agccaaaattgtagtttttgtatttaggggaccaaaattgcaag 22848228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 23869511 - 23869599
Alignment:
Q  157 aattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||| ||||| ||| |||  ||||| | |||||||||||| || || ||||||||||||| |||| |||||||| ||||||||||||    
T  23869511 aattgaacaaaaggatcaaagatgcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaag 23869599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 245
Target Start/End: Original strand, 8535613 - 8535720
Alignment:
Q  139 taggcattgaccg-gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaa 237  Q
    ||||||||||||  ||||||||||||| ||| || ||  ||||||| | |||||| ||||| |||| |||||||||||||||| ||||||  || |||||    
T  8535613 taggcattgaccaagtcaaaattgacctaaaggactactattgcaaaggggctaattcttagggggtcaaaattgtagtttctctacttaaaggatcaaa 8535712  T
Q  238 attgcaag 245  Q
    ||| ||||    
T  8535713 attacaag 8535720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 18905959 - 18906051
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaa-tgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||| ||||||||  |||  ||||| |||| |||||||||| ||||| ||||||||||||| |||||||||||||  |||||||||||    
T  18905959 gtcaaaattgatcaaaaagaccaaagatgcaaatgag-ctaaatctta-ggggctaaaattgtagtttttgtacttagggggctaaaattgcaag 18906051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 18797342 - 18797284
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||| ||| |||| ||||||||||||||   |||||| |||||||||||||||||    
T  18797342 ggctaaattttagggggtcaaaattgtagttttaatacttaaggggtcaaaattgcaag 18797284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 28618016 - 28617959
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||| ||||||| ||||| ||||||| ||||| ||||||||||||    
T  28618016 ggctaaatcttagggggc-aaaattgaagtttttgtacttggggggccaaaattgcaag 28617959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Complemental strand, 32739744 - 32739710
Alignment:
Q  189 ctaaatcttaaggggccaaaattgtagtttctgta 223  Q
    |||||||||||||||||||||||||||||| ||||    
T  32739744 ctaaatcttaaggggccaaaattgtagtttttgta 32739710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 1410130 - 1410069
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgt 213  Q
    |||||| ||||| |||| ||||||| ||||||  ||||||||||||| ||| ||||||||||    
T  1410130 gtcaaagttgacaaaaaggattaaagttgcaaataggctaaatcttaggggaccaaaattgt 1410069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 8534711 - 8534623
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    ||||||||||||| ||| || ||  ||||||| |||||||| ||||  ||| ||||||||||||||||| ||||||  || |||||||||    
T  8534711 gtcaaaattgacctaaaggactactattgcaaagaggctaattcttg-gggaccaaaattgtagtttctatacttaaaggatcaaaattg 8534623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 26545491 - 26545584
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    |||||||||||| ||||| ||  |||  ||||| | ||||||||||||  ||| ||||||| || ||| |||| ||| ||||||||||||||||    
T  26545491 ggtcaaaattgatcaaaatgaccaaagatgcaaaggggctaaatcttagagggtcaaaattataatttttgtatttaaggggtcaaaattgcaa 26545584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 32739705 - 32739660
Alignment:
Q  200 ggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||||| ||||| || |||| ||||||||||||    
T  32739705 ggggccaaaattgtagtttttgtacataaggggccaaaattgcaag 32739660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 245
Target Start/End: Complemental strand, 13568049 - 13568009
Alignment:
Q  205 caaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||||| |||| |||||||| ||||||||||||    
T  13568049 caaaattgtagtttttgtatttagggggccaaaattgcaag 13568009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 18904462 - 18904406
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgca 243  Q
    |||||| ||||| ||  ||||||||||||||| |||||||| |||| ||||||||||    
T  18904462 ggctaattcttagggaaccaaaattgtagtttttgtacttaaggggccaaaattgca 18904406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 39699723 - 39699831
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39699723 cgtaggcattgaccggtcaaaattgaccaaaaggattaaagttgcaatggggctaaatcttagggggccaaaattgtagtttctgtacttagggggtcaa 39699822  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  39699823 aattgcaag 39699831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 24422930 - 24422837
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| ||| ||| |||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  24422930 gtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgcaag 24422837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 52275098 - 52275005
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  52275098 gtcaaaattgaccaaaaggatcaaatttgcaatgaggctaaatcttaggggcccaaaattgtagtttttgtacttagggggtcaaaattgcaag 52275005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 39698706 - 39698604
Alignment:
Q  138 gtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaa 237  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| || |||||||||| |||||||||||||||||||| ||||    
T  39698706 gtaggtattgaccggtcaaaattgaccaaaaggattaaagttgcaacgaggctaaatctt-agtggccaaaattatagtttctgtacttagggggccaaa 39698608  T
Q  238 attg 241  Q
    ||||    
T  39698607 attg 39698604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 24426045 - 24426139
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||||  || ||| |||||||| |||||||||||| ||| | ||||||||||||| ||||||||||||| ||||||||||||    
T  24426045 ggtcaaaattgaccaaaagtatcaaatttgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttagggggccaaaattgcaag 24426139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 36613830 - 36613968
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||||| ||||||||||||||||  ||||||||||||| |  | | |   ||||||||||| ||||| || |||| |||||| |||||||||||||| ||    
T  36613830 aattaattaattacacacgtggcctgccacgtaggcgttg--aataa---gtcaaaattgatcaaaaggactaaagttgcaaagaggctaaatcttaggg 36613924  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    || |||||||||||||| ||||||||||||| ||||||| ||||    
T  36613925 ggtcaaaattgtagtttttgtacttagggggccaaaattacaag 36613968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 45157165 - 45157273
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    ||||||||||||| |||||||||||||||||| ||  |||  ||||| | || |||||||||| ||| |||||||||||||| ||||| ||||||| |||    
T  45157165 cgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaa 45157264  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  45157265 aattgcaag 45157273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 43058915 - 43058822
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| ||| |||  || || | ||||||||||||  |||| ||||||||||||| ||||||||||||||||||||||||||    
T  43058915 gtcaaaattgaccaaaaggatcaaagatgtaaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaag 43058822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 242
Target Start/End: Complemental strand, 44404587 - 44404482
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||||||||||||||||||||||||||||||| ||  |||  |||||   |||||||| ||| |||||||||||| |||||| |||||||||||||  ||    
T  44404587 cgtaggcattgaccggtcaaaattgaccaaaatgaccaaagatgcaaattggctaaattttagggggccaaaattatagtttttgtacttagggggctaa 44404488  T
Q  237 aattgc 242  Q
    ||||||    
T  44404487 aattgc 44404482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 39153043 - 39153180
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||| ||||||||||||||||||| ||||||||      ||||||||| |||||||||||||||||| ||  |||  ||||| | || |||||||||  |    
T  39153043 aatttaataattacacacgtggcatgccacgta------ggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagag 39153136  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    || |||||||||||||| ||||| || |||| ||||||||||||    
T  39153137 ggtcaaaattgtagtttttgtacataaggggccaaaattgcaag 39153180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 44411922 - 44412030
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    ||||||||||||||||||||||||| | |||| ||| ||| |||||| | | ||||||||||| |||  ||||||||||||| ||||||||||||   ||    
T  44411922 cgtaggcattgaccggtcaaaattggcaaaaaggatcaaagttgcaaagggcctaaatcttaaaggggtaaaattgtagtttttgtacttaggggactaa 44412021  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  44412022 aattgcaag 44412030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 45149926 - 45150035
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatctta-aggggccaaaattgtagtttctgtacttagggggtca 235  Q
    ||||||| ||||||||||||||||| |||||| ||| |||  ||||| | ||||||||||||  |||| ||||||||| |||| |||||||| |||| ||    
T  45149926 cgtaggctttgaccggtcaaaattggccaaaaggatcaaagatgcaaaggggctaaatcttagggggggcaaaattgttgtttttgtacttaaggggcca 45150025  T
Q  236 aaattgcaag 245  Q
    ||||||||||    
T  45150026 aaattgcaag 45150035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 39152076 - 39151968
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    ||||||||||||| |||||||||||||||||| ||  |||  ||||| | || |||||||||| | | |||||||||||||| ||||| ||||||| |||    
T  39152076 cgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagagtcaaaattgtagtttttgtacatagggggccaa 39151977  T
Q  237 aattgcaag 245  Q
    |||| ||||    
T  39151976 aattacaag 39151968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 45148725 - 45148618
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    ||||||| ||||||||||||||||| |||||| ||  |||  ||||| | || ||||||||| |||| |||||||||||||| | ||||||||||| |||    
T  45148725 cgtaggctttgaccggtcaaaattggccaaaaggaccaaagatgcaaaggggttaaatcttaggggggcaaaattgtagttt-tttacttagggggccaa 45148627  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  45148626 aattgcaag 45148618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 14999426 - 14999321
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgca-atgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtca 235  Q
    ||||||||||||||||||||||||||| |||| ||| ||| ||||| ||||| ||||||   |  ||  |||||||||||||| ||||||||||||||||    
T  14999426 cgtaggcattgaccggtcaaaattgacaaaaaggatcaaagttgcagatgag-ctaaat---agaggatcaaaattgtagtttttgtacttagggggtca 14999331  T
Q  236 aaattgcaag 245  Q
    ||||||||||    
T  14999330 aaattgcaag 14999321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 7983180 - 7983086
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||||||||| ||| ||| |||||||| || ||||||||| |||| ||||||||| ||||   ||| ||||||| ||||||||||||    
T  7983180 ggtcaaaattgaccaaaaggatgaaatttgcaatggggataaatcttaggggggcaaaattgtggttttgatacatagggggccaaaattgcaag 7983086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 43059977 - 43060065
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgc-aatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaatt 240  Q
    ||||||||||||||||| ||  |||  ||| ||||| |||||||||||||||| |||||||||||||| |||||||| ||||||||||||    
T  43059977 gtcaaaattgaccaaaaggaccaaagatgcaaatga-gctaaatcttaaggggtcaaaattgtagtttttgtacttaaggggtcaaaatt 43060065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 51684497 - 51684404
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    ||||||||||| |||||| ||  |||  ||||| | |||||||||||| ||||||||||||||||||| | ||| ||||||| |||||||||||    
T  51684497 ggtcaaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaaattgcaa 51684404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 52276133 - 52276222
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaatt 240  Q
    |||||||||||| ||||| ||| ||| |||||||| |||||||||||| ||| | ||| || |||||| ||||||||||||| |||||||    
T  52276133 ggtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggggactaaatttatagtttttgtacttagggggccaaaatt 52276222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 35066973 - 35067065
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    ||||||||||||||||| || ||  ||||||| | |||||||| ||| ||||||||||||||||||| ||| | ||||||| |||||| ||||    
T  35066973 gtcaaaattgaccaaaaggactattattgcaaaggggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaa 35067065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 245
Target Start/End: Original strand, 11437168 - 11437263
Alignment:
Q  150 cggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||||| ||| |||  || ||   || ||||||||| ||||||||||||||||||| |||||||| |||  ||||||||||||    
T  11437168 cggtcaaaattgaccaaaaggatcaaagatgtaaaagggttaaatcttagggggccaaaattgtagtttttgtacttaagggaccaaaattgcaag 11437263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 41364959 - 41364865
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||| ||  ||| |||||||| |||||||||||| |||| | ||||||| ||||  ||| |||||||| ||||||||||||    
T  41364959 ggtcaaaattgatcaaaatgaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtatttagggggccaaaattgcaag 41364865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 43378683 - 43378773
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    ||||||||| |||||||| |||||||  ||||| |  ||||||||||| | || |||||||||| ||| |||||||||||| |||||||||    
T  43378683 ggtcaaaatcgaccaaaaggattaaagatgcaaaggtgctaaatcttaggtggtcaaaattgtaatttttgtacttaggggatcaaaattg 43378773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 52827478 - 52827384
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||  ||| |||||||| |||||||||||| ||||   ||||||| ||||  |||||||||||||||||||||||||    
T  52827478 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaag 52827384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 37526849 - 37526941
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||| ||||||||  |||  ||||| | |||||||||||| |||||||||||||| |||||| || |||||| | ||||||||||||    
T  37526849 gtcaaaattgatcaaaaagaccaaagatgcaaaggggctaaatctta-ggggccaaaattgtggtttctatatttagggagccaaaattgcaag 37526941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 50680461 - 50680368
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| ||| |||  ||||| | || ||||||||| ||| | |||||| |||||| | ||||||||||| ||||||||||||    
T  50680461 gtcaaaattgaccaaaaggatcaaagatgcaaaggggttaaatcttaggggactaaaattatagtttttatacttagggggccaaaattgcaag 50680368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 14999911 - 15000019
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    ||||||||||||| ||||||||||||| |||| ||| ||| ||||||   | |||||| ||| | || ||  ||||||| || |||||||||||| ||||    
T  14999911 cgtaggcattgacaggtcaaaattgacaaaaaggatcaaagttgcaaatggactaaattttaggtggtcatgattgtagattttgtacttaggggatcaa 15000010  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  15000011 aattgcaag 15000019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 242
Target Start/End: Original strand, 35595162 - 35595253
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattg-tagtttctgtacttagggggtcaaaattgc 242  Q
    |||||||||||||||||| ||  |||  ||||| | ||||||||||| |||||||||||||| |||||| | ||| |||||||||||||||||    
T  35595162 ggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatctt-aggggccaaaattgttagtttttatacatagggggtcaaaattgc 35595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 33088614 - 33088681
Alignment:
Q  178 ttgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||| | |||||||||||| || | |||||||||||||| ||||||||  ||||||||||||||||    
T  33088614 ttgcaaaggggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaag 33088681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 45156193 - 45156090
Alignment:
Q  138 gtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaa 237  Q
    |||| ||||||| |||||||||||||||||||||  |||  | ||| |||| |||||||||  |||  ||||||||||||| ||||| |||  |||||||    
T  45156193 gtagacattgactggtcaaaattgaccaaaaagaccaaagatacaaagaggttaaatcttagagggttaaaattgtagtttttgtacatagaaggtcaaa 45156094  T
Q  238 attg 241  Q
    ||||    
T  45156093 attg 45156090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 52828040 - 52828134
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||  ||| |||||||| |||||||||||| |||| | ||||||| ||||  |||||||||| | ||||||||||||    
T  52828040 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggagccaaaattgcaag 52828134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 245
Target Start/End: Complemental strand, 33739231 - 33739130
Alignment:
Q  144 attgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgca 243  Q
    |||||||  |||||||||||||||| ||||||| |||||||| || ||||| ||| |||   ||| || |||||||||| | || |||||||||||| ||    
T  33739231 attgaccaatcaaaattgaccaaaatgattaaagttgcaatggggttaaattttaggggataaaatttttagtttctgtgcgtaaggggtcaaaattaca 33739132  T
Q  244 ag 245  Q
    ||    
T  33739131 ag 33739130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 245
Target Start/End: Original strand, 23980459 - 23980530
Alignment:
Q  174 aaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||| ||||| | |||||||||||| | | |||||||| |||||| ||||||||||| | ||||||||||||    
T  23980459 aaaaatgcaaaggggctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaag 23980530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 229
Target Start/End: Complemental strand, 40384864 - 40384778
Alignment:
Q  143 cattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagg 229  Q
    |||||| |||||||||||| |||||| ||  |||  ||||| |||||||||| ||| |||  |||||||||||||| ||||| ||||    
T  40384864 cattgatcggtcaaaattggccaaaaggaccaaagatgcaaagaggctaaattttaggggatcaaaattgtagtttttgtacatagg 40384778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 224
Target Start/End: Original strand, 30249461 - 30249533
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaa-attgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtac 224  Q
    ||||||||||| ||||||||| ||| ||   ||||| |||||||||||||||| |||||||||||||| |||||    
T  30249461 gtcaaaattgatcaaaaagatcaaagatacaaatga-gctaaatcttaaggggtcaaaattgtagtttttgtac 30249533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 39222444 - 39222537
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||| |||||||||  |||  |||||   ||| ||||||||  |||| || |||||||||| | ||||||||||| ||||||||||||    
T  39222444 gtcaaaattgcccaaaaagaccaaagatgcaaatgggcaaaatcttagagggctaacattgtagtttttatacttagggggccaaaattgcaag 39222537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 46525771 - 46525827
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaa 208  Q
    |||||||||||||||||| ||| | |||||||| | |||||||||||| |||||||||    
T  46525771 ggtcaaaattgaccaaaa-gatcacaattgcaaaggggctaaatcttagggggccaaa 46525827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 51685771 - 51685828
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    |||||||||||| |||| |||||||||||||| ||||| ||| ||| |||||| ||||    
T  51685771 ggctaaatcttagggggtcaaaattgtagtttttgtacatagagggccaaaatcgcaa 51685828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 142 - 245
Target Start/End: Complemental strand, 7267783 - 7267680
Alignment:
Q  142 gcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  7267783 gcattgaccggtcaaaattgaccaaaaggattaaagttgcaatgaggctaaatcttagggggccaaaattgtagtttctgtacttagggggccaaaattg 7267684  T
Q  242 caag 245  Q
    ||||    
T  7267683 caag 7267680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 109 - 245
Target Start/End: Original strand, 54540724 - 54540854
Alignment:
Q  109 taattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaa 208  Q
    ||||||||||||||||| ||||||||      ||||||||||||||||||||||| |||| ||| ||| |||||| | |||||||||||| |||||||||    
T  54540724 taattacacacgtggcatgccacgta------ggcattgaccggtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggccaaa 54540817  T
Q  209 attgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||| |||||||| |||||||||||||||||    
T  54540818 attgtagtttttgtacttaaggggtcaaaattgcaag 54540854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 7268783 - 7268891
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||| ||||||||||||||||||||| ||||| |||||||||||||||| | |||||||||| | ||||||||||||||||||| |||||||| || |||    
T  7268783 cgtaagcattgaccggtcaaaattgatcaaaaggattaaaattgcaatgggactaaatcttaggaggccaaaattgtagtttctatacttaggaggccaa 7268882  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  7268883 aattgcaag 7268891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 8456608 - 8456514
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||| |||| ||| ||| ||||||||||||||||||||| ||||||||||||||||||| |||| |||||||  ||||||||||||    
T  8456608 ggtcaaaattgactaaaaggatcaaatttgcaatgaggctaaatcttagggggccaaaattgtagtttttgtatttaggggaccaaaattgcaag 8456514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 19984994 - 19984886
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    ||||||||||||| |||||||||||||||||| ||  |||  ||||| | || |||||||||| ||| |||||||||||||| ||||| ||||||| |||    
T  19984994 cgtaggcattgactggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaa 19984895  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  19984894 aattgcaag 19984886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 49216421 - 49216285
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaa-tgaggctaaatcttaag 200  Q
    ||||||||||||||||||||| || ||||||||| |      ||||| |||||||||||| |||||| ||| |||  ||||| |||| ||||||||||||    
T  49216421 aattaaataattacacacgtgacatgccacgtagac------attgatcggtcaaaattggccaaaatgatcaaagatgcaaatgag-ctaaatcttaag 49216329  T
Q  201 gggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    ||| || ||||||||||| ||||| |||||||||||||||||||    
T  49216328 gggacataattgtagtttttgtacatagggggtcaaaattgcaa 49216285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 55191952 - 55192059
Alignment:
Q  138 gtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaa 237  Q
    |||| |||| |||| ||||||||||| |||| ||| |||||||||| | || ||| |||| |||||||||||||||||||| ||||||||| ||| ||||    
T  55191952 gtagacattaaccgatcaaaattgacaaaaatgatcaaaattgcaaaggggttaattcttgaggggccaaaattgtagtttttgtacttagagggccaaa 55192051  T
Q  238 attgcaag 245  Q
    ||||||||    
T  55192052 attgcaag 55192059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 12700348 - 12700210
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||||| ||||||||||||||||  ||||||||||||| |  | | |   ||||||||||||||||| ||  |||  ||||||| ||||||||| || ||    
T  12700348 aattaattaattacacacgtggcctgccacgtaggcgttg--aataa---gtcaaaattgaccaaaaggaccaaagatgcaatgtggctaaatcataggg 12700254  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    || |||||||||||||| ||||||||||||| ||||||||||||    
T  12700253 ggtcaaaattgtagtttttgtacttagggggccaaaattgcaag 12700210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 244
Target Start/End: Original strand, 22776739 - 22776875
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||| ||||||||||||||||||| |||||||||||      ||||||||||||||||||   |||  ||  |||  ||||| | |||||| ||||| ||    
T  22776739 aattcaataattacacacgtggcatgccacgtaggc------attgaccggtcaaaattgggaaaatggaccaaatatgcaaaggggctaattcttaggg 22776832  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||    
T  22776833 ggccaaaattgtagtttttgtacatagggggccaaaattgcaa 22776875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 7758533 - 7758439
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||||||||| ||  |||  | ||| | || ||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  7758533 ggtcaaaattgaccaaaaggaccaaagatacaaaggggttaaatcttagggggcaaaaattgtagtttttgtacttagggggtcaaaattgcaag 7758439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 29931356 - 29931263
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| || ||  ||||||| | || ||||||||| ||||||||||||||||||| |||| ||||||||  |||||||||||    
T  29931356 gtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaag 29931263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 29980510 - 29980417
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| || ||  ||||||| | || ||||||||| ||||||||||||||||||| |||| ||||||||  |||||||||||    
T  29980510 gtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaag 29980417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 240
Target Start/End: Complemental strand, 52839180 - 52839079
Alignment:
Q  139 taggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaa 238  Q
    ||||| |||||||||||||||||||||||| ||| ||| |||||||| |||||||| |||  |||  |||||||| ||||  |||||||| |||||||||    
T  52839180 taggctttgaccggtcaaaattgaccaaaaggatgaaatttgcaatggggctaaattttagaggggtaaaattgttgttttggtacttagagggtcaaaa 52839081  T
Q  239 tt 240  Q
    ||    
T  52839080 tt 52839079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 245
Target Start/End: Complemental strand, 534595 - 534536
Alignment:
Q  186 aggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||||    
T  534595 aggctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaag 534536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 6249739 - 6249646
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||| ||| ||| |||||||||| ||||||||||| |||  ||||||||||||| |||||||| ||| | |||||||||||    
T  6249739 ggtcaaaattgatcaaaaggatcaaatttgcaatgagactaaatcttaa-gggataaaattgtagtttttgtacttaagggattaaaattgcaag 6249646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 29932669 - 29932762
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||| |||||| || ||  ||||||| | | ||||||||||||||| |||||||||||||| |||||||| |||| ||||||||||||    
T  29932669 ggtcaaaattggccaaaaggactattattgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtactta-ggggccaaaattgcaag 29932762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 29981823 - 29981916
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||| |||||| || ||  ||||||| | | ||||||||||||||| |||||||||||||| |||||||| |||| ||||||||||||    
T  29981823 ggtcaaaattggccaaaaggactattattgcaaagggactaaatcttaaggggtcaaaattgtagtttttgtactta-ggggccaaaattgcaag 29981916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 12703498 - 12703559
Alignment:
Q  179 tgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaatt 240  Q
    ||||||| ||||||||| || ||||||||||||||||||| ||||||||||||| |||||||    
T  12703498 tgcaatggggctaaatcatagggggccaaaattgtagtttttgtacttagggggccaaaatt 12703559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 188 - 245
Target Start/End: Complemental strand, 24516554 - 24516497
Alignment:
Q  188 gctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||||||||||||||||| | ||||||||| | ||||||||||||    
T  24516554 gctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaag 24516497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 245
Target Start/End: Original strand, 52840573 - 52840668
Alignment:
Q  150 cggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||| ||||||| ||| ||| |||||||| |||||||||||| |||| ||||||||| ||||   || |||||| | ||||||||||||    
T  52840573 cggtcaaaattaaccaaaatgataaaatttgcaatggggctaaatcttagggggacaaaattgttgttttgataattagggagccaaaattgcaag 52840668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 47609828 - 47609734
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||  ||| |||||||| |||||||||||| ||||   ||||||| ||||  |||||||||||||||||||||||||    
T  47609828 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaag 47609734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 47610550 - 47610644
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||  ||| |||||||| |||||||||||| |||| | ||||||| ||||  |||||||||||| ||||||||||||    
T  47610550 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaag 47610644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 245
Target Start/End: Complemental strand, 47614288 - 47614222
Alignment:
Q  179 tgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||| |||||||||||||| |||||||||||||| ||||   ||||||||||| ||||||||||||    
T  47614288 tgcaaagaggctaaatcttagggggccaaaattgttgttttgatacttagggggccaaaattgcaag 47614222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 51470103 - 51470009
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||| ||  ||| |||||||| |||||||||||| ||||   ||||||| ||||  |||||||||||| ||||||||||||    
T  51470103 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggccaaaattgcaag 51470009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 54539922 - 54539792
Alignment:
Q  109 taattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaa-tgaggctaaatcttaaggggccaa 207  Q
    ||||||||||||||||| |||||||| || |      ||||| |||||||||| | |||| ||| ||| |||||| |||| |||||||||| |||  |||    
T  54539922 taattacacacgtggcatgccacgtatgctt------tgaccagtcaaaattggcaaaaaggatcaaagttgcaaatgag-ctaaatcttaggggatcaa 54539830  T
Q  208 aattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||| |||| ||||||||| |||||||||||    
T  54539829 aattgtagtttttgtatttagggggttaaaattgcaag 54539792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 218
Target Start/End: Complemental strand, 4271579 - 4271504
Alignment:
Q  143 cattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagttt 218  Q
    ||||||||||||||||||||| |||| ||| ||| ||||||   ||||||||||||||  || |||||||||||||    
T  4271579 cattgaccggtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaagatgctaaaattgtagttt 4271504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 19985997 - 19986136
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||| ||||||||||||||||||| ||||||||      ||||||||| |||||||||||||| ||| ||  |||  ||||| | || |||||||||  |    
T  19985997 aatttaataattacacacgtggcatgccacgta------ggcattgactggtcaaaattgaccgaaatgaccaaagatgcaaaggggttaaatcttagag 19986090  T
Q  202 ggccaaaattgtagtttctgtacttag--ggggtcaaaattgcaag 245  Q
    || |||||||||||||| | ||| |||  |||| ||||||||||||    
T  19986091 ggtcaaaattgtagtttttatacataggaggggccaaaattgcaag 19986136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 245
Target Start/End: Complemental strand, 6170388 - 6170309
Alignment:
Q  164 caaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||| ||| ||| |||||||||| ||||||||||||||   ||||||||| ||| |||||||| ||| |||||||||||||    
T  6170388 caaaatgatcaaatttgcaatgagactaaatcttaagggt--aaaattgtaatttttgtacttaagggatcaaaattgcaag 6170309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 49220479 - 49220538
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaa 167  Q
    |||||||||||||||||||||||| ||||      ||||| |||||||||||||||||||||||||    
T  49220479 aattaaataattacacacgtggcaagcca------cgtagacattgaccggtcaaaattgaccaaa 49220538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 51038803 - 51038853
Alignment:
Q  194 tcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    ||||||||| ||||||||||||||| ||| | |||||||||||||||||||    
T  51038803 tcttaagggaccaaaattgtagtttttgttcatagggggtcaaaattgcaa 51038853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 34019152 - 34019209
Alignment:
Q  188 gctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||| ||| ||| ||||||||||||| | ||||| ||||||||||||||||||||    
T  34019152 gctaaattttaggggaccaaaattgtagtgtttgtacctagggggtcaaaattgcaag 34019209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 46721190 - 46721283
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    ||||||||||||||| || ||  |||  ||||| | |||||||||||| ||| | ||||||||||||| ||||| |||||||| ||||| ||||    
T  46721190 ggtcaaaattgaccagaaggaccaaatatgcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaaatcgcaa 46721283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 8876001 - 8875945
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgca 243  Q
    |||||||||||| ||||||||||||||||||| ||||| || ||||  |||||||||    
T  8876001 ggctaaatcttagggggccaaaattgtagtttttgtacataaggggctaaaattgca 8875945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 11670514 - 11670422
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    ||||||||||| ||||| ||  |||| ||||||| | ||||||| |||||| |||||||| |||||| | ||||||||||   ||||||||||    
T  11670514 gtcaaaattgatcaaaaggacaaaaaatgcaatgggactaaatcataagggaccaaaattatagtttttatacttaggggactaaaattgcaa 11670422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 241
Target Start/End: Original strand, 23770377 - 23770467
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    ||||||| |||||||||| || ||||  ||||| | || ||||||||| ||||| ||||||||||||| ||||| || |||  ||||||||    
T  23770377 ggtcaaagttgaccaaaaggactaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacataagggaccaaaattg 23770467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 49398271 - 49398194
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaa-tgaggctaaatcttaaggggccaaaattgta 214  Q
    |||||||||||||||||||| ||||   |||| ||| ||| |||||| |||| |||||||||||| |||||||||||||    
T  49398271 cgtaggcattgaccggtcaacattggtaaaaaggatcaaagttgcaaatgag-ctaaatcttaagaggccaaaattgta 49398194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 51470425 - 51470519
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||| ||  ||| ||||||||  ||||||||||| |||  | ||||||| ||||  ||||||||||| || ||||||||||    
T  51470425 ggtcaaaattgatcaaaaggaccaaagttgcaatggagctaaatcttaggggtgctaaattgtggttttggtacttaggggatctaaattgcaag 51470519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 245
Target Start/End: Complemental strand, 55191653 - 55191548
Alignment:
Q  139 taggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaa 238  Q
    ||||| ||||| | |||||| |||  |||| ||| |||||||||| | ||||||||||| || ||  |||||| |||||| |||| |||||| |||||||    
T  55191653 taggctttgactgatcaaaagtgataaaaaggatcaaaattgcaaaggggctaaatcttgagaggg-aaaattatagtttttgtatttagggtgtcaaaa 55191555  T
Q  239 ttgcaag 245  Q
    |||||||    
T  55191554 ttgcaag 55191548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 18442760 - 18442695
Alignment:
Q  153 tcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagttt 218  Q
    ||||||||| |||||| || | ||| ||||||| ||||||| | || |||||||||||||||||||    
T  18442760 tcaaaattgcccaaaaggactgaaactgcaatggggctaaaacatagggggccaaaattgtagttt 18442695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 19487834 - 19487769
Alignment:
Q  153 tcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagttt 218  Q
    ||||||||| |||||| || | ||| ||||||| ||||||| | || |||||||||||||||||||    
T  19487834 tcaaaattgcccaaaaggactgaaactgcaatggggctaaaacatagggggccaaaattgtagttt 19487769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 51037630 - 51037573
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    |||||| ||||| ||||| ||||||||||||| ||| | ||| |||||||||||||||    
T  51037630 ggctaattcttagggggctaaaattgtagtttttgttcatagagggtcaaaattgcaa 51037573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 241
Target Start/End: Complemental strand, 31645110 - 31645014
Alignment:
Q  145 ttgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    |||||||||||||||||  ||||| ||  |||  |||||   |||||||||||| | ||  ||||||||||||| || |||||||||| ||||||||    
T  31645110 ttgaccggtcaaaattggtcaaaaggaccaaagatgcaaatgggctaaatcttaggaggttaaaattgtagtttttgcacttagggggccaaaattg 31645014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 47615548 - 47615608
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattg 212  Q
    ||||||||||||||||| ||  |||  ||||| | |||||||||||| |||||||||||||    
T  47615548 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattg 47615608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 53901407 - 53901451
Alignment:
Q  200 ggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    |||||||| |||||||||| |||||||| || |||||||||||||    
T  53901407 ggggccaacattgtagtttttgtacttaaggagtcaaaattgcaa 53901451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 8758793 - 8758901
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||||||||||| || |||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  8758793 cgtaggcattgatcgatcaaaattgaccaaaaggattaaaattgcaatggagctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaa 8758892  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  8758893 aattgcaag 8758901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 35935491 - 35935596
Alignment:
Q  139 taggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaa 238  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||  ||||    
T  35935491 taggcattgaccggtcaaaattggccaaaaggattaaagttgcaatgaggctaaatcttagggggccaaaattgtagtttatgtacttagggggctaaaa 35935590  T
Q  239 ttgcaa 244  Q
    ||||||    
T  35935591 ttgcaa 35935596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 8757818 - 8757715
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||  ||    
T  8757818 cgtaggcattgaccg-tcaaaattgaccaaaaggattaaaattgcaatggggctaaatcttaagggtccaaaattgtagtttctgtacttagggggctaa 8757720  T
Q  237 aattg 241  Q
    |||||    
T  8757719 aattg 8757715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 245
Target Start/End: Original strand, 31600943 - 31601049
Alignment:
Q  139 taggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaa 238  Q
    ||||||||||||||||||||||||| |||| ||| ||| ||||||   ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  31600943 taggcattgaccggtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttagggggtcaaaa 31601042  T
Q  239 ttgcaag 245  Q
    |||||||    
T  31601043 ttgcaag 31601049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 109 - 245
Target Start/End: Complemental strand, 31599956 - 31599826
Alignment:
Q  109 taattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaa 208  Q
    ||||||||||||||||| |||||||||||      |||||||||||||||||| | |||| ||| ||| |||||| | |||||||||||| ||| |||||    
T  31599956 taattacacacgtggcatgccacgtaggc------attgaccggtcaaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggaccaaa 31599863  T
Q  209 attgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||| ||||||||||||||||||||||||||    
T  31599862 attgtagtttttgtacttagggggtcaaaattgcaag 31599826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 52491563 - 52491671
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||||| ||| |||||||||||||||||||||||| |||| ||  |||    
T  52491563 cgtaggcattgacctgtcaaaattgaccaaaaggattaaagttgcaatggggctaaattttagggggccaaaattgtagtttctgtatttagaggaccaa 52491662  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  52491663 aattgcaag 52491671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 35934487 - 35934379
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    ||||||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||||||||||||||||| || ||||| ||||||||||  |||    
T  35934487 cgtaggcattgactggtcaaaattgaccaaaagaattaaagttgcaatggggctaaatcttaaggggccaaaattataatttctttacttaggggaccaa 35934388  T
Q  237 aattgcaag 245  Q
    |||| ||||    
T  35934387 aattacaag 35934379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 19750545 - 19750639
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||| ||||||||| ||| ||| |||||||| |||||||||||| ||||  ||||||||||||| ||||||||||||| ||||||||||||    
T  19750545 ggtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaag 19750639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 19789261 - 19789167
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||| ||||||||| ||| ||| |||||||| |||||||||||| ||||  ||||||||||||| ||||||||||||| ||||||||||||    
T  19789261 ggtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaag 19789167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 245
Target Start/End: Original strand, 26421597 - 26421686
Alignment:
Q  155 aaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||| |||| ||| ||| |||||||| ||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  26421597 aaaattgactaaaatgatcaaatttgcaatg-ggctaaatcttaaggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaag 26421686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 1290124 - 1290262
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgac-cggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaag 200  Q
    |||||| |||||||||| |||||| ||||| |||||||      |||| ||||||||||||||||||| ||  |||  ||||| | || ||||||||| |    
T  1290124 aattaattaattacacatgtggcatgccacttaggcgt------tgactcggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagg 1290217  T
Q  201 gggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||| ||||||||||||| ||||||||| ||| ||||||||||||    
T  1290218 gggctaaaattgtagtttttgtacttagagggccaaaattgcaag 1290262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 10448187 - 10448311
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||| ||||||||||||||||||| ||||||||      ||||||||| ||||||||||| |||||| ||  |||  ||||| | ||||| ||||||  |    
T  10448187 aattcaataattacacacgtggcatgccacgta------ggcattgactggtcaaaattggccaaaaggaccaaagatgcaaaggggctatatcttagag 10448280  T
Q  202 ggccaaaattgtagtttctgtacttaggggg 232  Q
    ||||||||||||||||| ||||| |||||||    
T  10448281 ggccaaaattgtagtttttgtacataggggg 10448311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 5525490 - 5525396
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||  ||| |||||||| |||||||||||| |||| | ||||||| ||||  |||||||||||||||||||||||||    
T  5525490 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaag 5525396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 12129718 - 12129660
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| |||||||||||||| |||||||| |||| ||||||||||||    
T  12129718 ggctaaatcttaaggggtcaaaattgtagtttttgtacttacggggccaaaattgcaag 12129660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 25685065 - 25684971
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||| ||  ||| |||||||| |||||||||||| |||| | ||||||| ||||  |||||||| ||||||||||||||||    
T  25685065 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaaattgcaag 25684971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 21178139 - 21178034
Alignment:
Q  139 taggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaa 238  Q
    |||||||||||| |||||||||| | |||| ||| ||| ||||||   |||||||| ||| |||| |||||||||||||| ||| | |||||| ||||||    
T  21178139 taggcattgaccagtcaaaattggcaaaaatgatcaaagttgcaaaagggctaaattttagggggtcaaaattgtagtttttgttcataggggatcaaaa 21178040  T
Q  239 ttgcaa 244  Q
    ||||||    
T  21178039 ttgcaa 21178034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 37728535 - 37728628
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    ||||||||||||| |||| ||| |||  ||||| || |||||||||||| ||| |||||||||||||| ||||| |||| || |||||||||||    
T  37728535 ggtcaaaattgactaaaaggatcaaagatgcaaagaagctaaatcttaaagggtcaaaattgtagtttttgtacataggaggccaaaattgcaa 37728628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 8155867 - 8155788
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggg 231  Q
    |||||| |||||||||| || ||||  ||||| | |||||||||||| ||||||||||||||||||| || |||||||||    
T  8155867 gtcaaagttgaccaaaatgactaaagatgcaaagcggctaaatcttagggggccaaaattgtagtttttgaacttagggg 8155788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 13386147 - 13386052
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggcca-aaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||| ||  ||| ||||||||||||||||||||| ||||  | ||||||| ||||  |||||||||||| ||||||||||||    
T  13386147 ggtcaaaattgatcaaaaggaccaaagttgcaatgaggctaaatcttagggggggataaattgtggttttggtacttagggggccaaaattgcaag 13386052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 48780352 - 48780285
Alignment:
Q  178 ttgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||| |||||||||||| |||| | ||||||| ||||  |||||||||||||||||||||||||    
T  48780352 ttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaag 48780285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 1835108 - 1835166
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| |||| ||||||||||||||   ||||||||||||||||||||||||    
T  1835108 ggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaag 1835166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 5526096 - 5526190
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||  |||||||||||| |||||||||||| |||| | ||||||| ||||   ||||||||||| ||||||||||||    
T  5526096 ggtcaaaattggtcaaaaggaccaaaattgcaatggggctaaatcttaggggggctaaattgtggttttgttacttagggggccaaaattgcaag 5526190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 10470677 - 10470583
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||| ||  ||| |||||||| |||||||||||| |||| | |||||||  |||  |||||||| ||||||||||||||||    
T  10470677 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaattgcaag 10470583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 10471358 - 10471452
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||  ||| |||||||| |||||||||||| |||| | ||||||| ||||  |||||||||||| ||||||||||||    
T  10471358 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaag 10471452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 25685792 - 25685886
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||  ||| |||||||| |||||||||||| |||| | ||||||| ||||  |||||||||||| ||||||||||||    
T  25685792 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttagggggtctaaattgtggttttggtacttagggggccaaaattgcaag 25685886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 244
Target Start/End: Original strand, 50909634 - 50909736
Alignment:
Q  143 cattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaa-ggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    |||||||||||||||||||| ||||| ||  |||  ||||| | ||||||||||||| |||| |||||||||||||| | ||| ||||| |||||||| |    
T  50909634 cattgaccggtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaatcttaagggggtcaaaattgtagtttttatacatagggagtcaaaatcg 50909733  T
Q  242 caa 244  Q
    |||    
T  50909734 caa 50909736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 46638696 - 46638784
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaatt 240  Q
    ||||||||||| |||||||| |||| |||||| | | |||||||||| ||||| ||||||||| ||| ||| | |||||| ||||||||    
T  46638696 gtcaaaattgatcaaaaagactaaagttgcaaagggactaaatcttagggggctaaaattgtaatttttgttcataggggatcaaaatt 46638784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 1834251 - 1834160
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagggg-ccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    |||||||||||||||||| ||  |||  |||||   |||||||||||| |||| ||||||||||||||| | ||| ||||||||||||||||    
T  1834251 ggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggggccaaaattgtagtttttatacatagggggtcaaaattg 1834160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 1289229 - 1289139
Alignment:
Q  150 cggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaatt 240  Q
    ||||||||||||||||||| ||  |||  ||||| | || ||||||||||| ||| ||||||||||||| | ||||||| || ||||||||    
T  1289229 cggtcaaaattgaccaaaaggaccaaagatgcaagggggttaaatcttaagaggctaaaattgtagtttttatacttagaggatcaaaatt 1289139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 13386502 - 13386596
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||  ||| |||||||| ||||| |||||| |||| | ||||||| ||||  ||||||| |||||||||||||||||    
T  13386502 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctagatcttaggggggctaaattgtggttttggtacttatggggtcaaaattgcaag 13386596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 49308045 - 49308091
Alignment:
Q  199 aggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||||||    
T  49308045 agggggcaaaattgtagtttttgtacttagggggccaaaattgcaag 49308091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 8896880 - 8896940
Alignment:
Q  150 cggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaatt 211  Q
    ||||||||||||||||||||| | || ||||||| | |||||||||||||||| ||||||||    
T  8896880 cggtcaaaattgaccaaaaag-tcaatattgcaaaggggctaaatcttaagggaccaaaatt 8896940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 17383122 - 17383029
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||| ||| || ||  ||||||| | || ||| ||||  ||||||||||||||||||| |||||||| |||  ||||||||||||    
T  17383122 gtcaaaattgacctaaaggactactattgcaaaggggataattcttggggggccaaaattgtagtttttgtacttaagggaccaaaattgcaag 17383029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 17388182 - 17388275
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||| ||| || ||  |||| || | |||||| ||||  ||||||||||||||||||| |||||||| |||  ||||||||||||    
T  17388182 gtcaaaattgacctaaaggactactattgtaaaggggctaattcttggggggccaaaattgtagtttatgtacttaagggaccaaaattgcaag 17388275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 1963301 - 1963234
Alignment:
Q  177 attgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    ||||||| | |||||| ||||| ||||| ||||||||||||| ||||| |||| || |||||||||||    
T  1963301 attgcaaaggggctaattcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaa 1963234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 10447152 - 10447045
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    ||||||||||||| ||| ||||||  |||||| ||  |||  ||||| | |||||||||||| ||||  |||||||| |||| ||||| |||||||  ||    
T  10447152 cgtaggcattgactggttaaaattagccaaaaggaccaaagatgcaaaggggctaaatcttaggggggtaaaattgtggtttttgtacatagggggctaa 10447053  T
Q  237 aattgcaa 244  Q
    ||||||||    
T  10447052 aattgcaa 10447045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 13509329 - 13509422
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    ||||||||||| |||||| ||  |||  ||||| | |||||||||||| |||  ||||||||||||||   ||||| ||||| |||||||||||    
T  13509329 ggtcaaaattggccaaaaggagcaaaggtgcaaaggggctaaatcttaggggatcaaaattgtagttttcatacttggggggccaaaattgcaa 13509422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 245
Target Start/End: Original strand, 21539078 - 21539135
Alignment:
Q  188 gctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||| |||| |||||||||||||| |  ||||||| || ||||||||||||    
T  21539078 gctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaag 21539135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 244
Target Start/End: Original strand, 27257966 - 27258023
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    |||||||||||||||||  ||||||| ||||| ||||  ||| |||||||||||||||    
T  27257966 ggctaaatcttaaggggttaaaattggagtttttgtatatagagggtcaaaattgcaa 27258023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 12352095 - 12351959
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    ||||||||||||||||||||| |||||||| || ||      |||||||||||||||||| |||||| | ||||||||||||||||||||||||||| ||    
T  12352095 aattaaataattacacacgtgacacgccacatatgc------attgaccggtcaaaattgtccaaaagggttaaaattgcaatgaggctaaatcttaggg 12352002  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    || |||||||||||||| |||||||||||||||||||||||||    
T  12352001 ggtcaaaattgtagtttttgtacttagggggtcaaaattgcaa 12351959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 12353288 - 12353424
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    ||||||||||||||||||||||||||||| ||| ||      |||||||||||||||||||||||||  ||||||||||||||| |||||||||||| ||    
T  12353288 aattaaataattacacacgtggcacgccatgtaagc------attgaccggtcaaaattgaccaaaagaattaaaattgcaatggggctaaatcttaggg 12353381  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||    
T  12353382 ggccaaaattatagttt-tgtacttagggggccaaaattgcaag 12353424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 142 - 245
Target Start/End: Original strand, 29968298 - 29968401
Alignment:
Q  142 gcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    |||||||||||||||||||| |||||| ||||||| |||||||| |||||||||||| ||| ||| ||||||||||| ||||||||||||| ||||||||    
T  29968298 gcattgaccggtcaaaattggccaaaatgattaaagttgcaatggggctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaattg 29968397  T
Q  242 caag 245  Q
    ||||    
T  29968398 caag 29968401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 241
Target Start/End: Complemental strand, 18978164 - 18978060
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||||||||||||| ||||||||||   |||| ||| ||| |||||| | |||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  18978164 cgtaggcattgacccgtcaaaattggaaaaaaggatcaaagttgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacttagggggccaa 18978065  T
Q  237 aattg 241  Q
    |||||    
T  18978064 aattg 18978060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 24123027 - 24122920
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||||||||||||||||||||||||||||||| ||  |||  ||||| || ||||||||||| ||| | |||||| |||||| |||||||||||||||||    
T  24123027 cgtaggcattgaccggtcaaaattgaccaaaaggaccaaagatgcaaagaagctaaatcttaggggactaaaattatagtttttgtacttagggggtcaa 24122928  T
Q  237 aattgcaa 244  Q
    ||||||||    
T  24122927 aattgcaa 24122920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 45114473 - 45114580
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||| |||||||| || ||||||||||||||||| ||||| ||| |   |||    
T  45114473 cgtaggcattgaccggtcaaaattaaccaaaatgattaaagttgcaatgaggttaaatctt-agaggccaaaattgtagtttgtgtacatagtgaaccaa 45114571  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  45114572 aattgcaag 45114580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 245
Target Start/End: Complemental strand, 11287919 - 11287813
Alignment:
Q  139 taggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaa 238  Q
    ||||| ||||||||||||||||||  |||| ||| |||||||||| |  | ||| ||||| ||||||||||||||||||||||||||||| ||| |||||    
T  11287919 taggcgttgaccggtcaaaattgataaaaatgatcaaaattgcaaaggagttaattcttagggggccaaaattgtagtttctgtacttagtgggccaaaa 11287820  T
Q  239 ttgcaag 245  Q
    |||||||    
T  11287819 ttgcaag 11287813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 241
Target Start/End: Complemental strand, 18971054 - 18970951
Alignment:
Q  138 gtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaa 237  Q
    |||||||||||||||||||||||| | |||| ||  ||| |||||| | || |||||||| ||||| |||||||||||||| ||||||||||||| ||||    
T  18971054 gtaggcattgaccggtcaaaattggcaaaaaggaccaaagttgcaaaggggttaaatcttcaggggtcaaaattgtagtttttgtacttagggggccaaa 18970955  T
Q  238 attg 241  Q
    ||||    
T  18970954 attg 18970951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 245
Target Start/End: Original strand, 18979077 - 18979184
Alignment:
Q  138 gtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaa 237  Q
    ||||||||||||| |||||||||| | |||| ||| ||| ||||||   ||||||||| |||||||||||||||||||||| | || |||||||| ||||    
T  18979077 gtaggcattgacctgtcaaaattggcaaaaaggatcaaagttgcaaatgggctaaatcataaggggccaaaattgtagtttttatatttagggggccaaa 18979176  T
Q  238 attgcaag 245  Q
    ||||||||    
T  18979177 attgcaag 18979184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 245
Target Start/End: Original strand, 32207302 - 32207389
Alignment:
Q  158 attgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||| ||  |||  ||||| |||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||    
T  32207302 attgaccaaaaggaccaaagatgcaaagaggctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaag 32207389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 1824049 - 1824142
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| ||  |||  |||||   |||||||||||| ||||||||||||||||||| ||||||||||||  ||||||||||||    
T  1824049 gtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaag 1824142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 1858494 - 1858587
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| ||  |||  |||||   |||||||||||| ||||||||||||||||||| ||||||||||||  ||||||||||||    
T  1858494 gtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaattgtagtttttgtacttaggggaccaaaattgcaag 1858587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 10006519 - 10006381
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||||| ||||||||||||||||  ||||||||||||| |  | | |   ||||||||||||||||| ||  |||  ||||| | |||||||||||| ||    
T  10006519 aattaattaattacacacgtggcctgccacgtaggcgttg--aataa---gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggg 10006425  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||   ||||||||||| ||||||||||||    
T  10006424 ggccaaaattgttgttttgatacttagggggccaaaattgcaag 10006381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 10007689 - 10007827
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||||| ||||||||||||||||  ||||||||||||| |  | | |   |||||||||||| |||| ||  |||  ||||| | |||||||||||| ||    
T  10007689 aattaattaattacacacgtggcctgccacgtaggcgttg--aataa---gtcaaaattgacgaaaaggaccaaagatgcaaaggggctaaatcttaggg 10007783  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    | |||||||||| |||||| ||||||||||| ||||||||||||    
T  10007784 gaccaaaattgtggtttctatacttagggggccaaaattgcaag 10007827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 22220483 - 22220425
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||||||||||||||||| | ||| ||||||||||||||||||||    
T  22220483 ggctaaatcttagggggccaaaattgtagtttttatacatagggggtcaaaattgcaag 22220425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 11282138 - 11282046
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    ||||||||||| ||||||||| |||||||||| | || ||||||||| |||| |||||||||  ||| ||||  ||||||| |||||||||||    
T  11282138 gtcaaaattgatcaaaaagatcaaaattgcaaaggggttaaatcttagggggtcaaaattgtcatttttgtatatagggggccaaaattgcaa 11282046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 228
Target Start/End: Complemental strand, 45113014 - 45112923
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttag 228  Q
    |||||| ||||||| |||||||||||  |||||||| |||||||||| | |||||| ||||| ||| |||||||| || ||| |||||||||    
T  45113014 cgtaggtattgaccagtcaaaattgataaaaaagatcaaaattgcaaaggggctaattcttaggggaccaaaattataatttttgtacttag 45112923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 1823647 - 1823589
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||| || |||||||||||| ||||||||| ||||||||||||||||    
T  1823647 ggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaag 1823589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 1858092 - 1858034
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||| || |||||||||||| ||||||||| ||||||||||||||||    
T  1858092 ggctaaatcttaggggaccgaaattgtagtttttgtacttagagggtcaaaattgcaag 1858034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 22221370 - 22221428
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| |||| ||||||||||||||   ||||||||||||||||||||||||    
T  22221370 ggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaag 22221428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 22227712 - 22227770
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| |||| ||||||||||||||   ||||||||||||||||||||||||    
T  22227712 ggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaag 22227770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 5514111 - 5514022
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    ||||||||||| ||||| ||  |||  ||||| | |||||||| ||| |||| |||||||||||||| ||||||||||||| ||||||||    
T  5514111 gtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggccaaaattg 5514022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 245
Target Start/End: Original strand, 24123859 - 24123962
Alignment:
Q  142 gcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    ||||| ||||||||||||||||||||| ||  |||  ||||| | |||||||||||| | ||| ||||||||| |||  ||||||| | || ||||||||    
T  24123859 gcattaaccggtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggaggctaaaattgtaattttagtacttaagaggccaaaattg 24123958  T
Q  242 caag 245  Q
    ||||    
T  24123959 caag 24123962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 40471107 - 40471189
Alignment:
Q  142 gcattgac-cggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgta 223  Q
    |||||||| ||||||||||||||||||| ||  |||  | ||| |||| ||||||||||||||| ||||||||||||| ||||    
T  40471107 gcattgactcggtcaaaattgaccaaaatgaccaaagatacaaagaggttaaatcttaaggggctaaaattgtagtttttgta 40471189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 8388593 - 8388500
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    |||||||||||  ||||| ||  ||||  |||| | |||||||||||| |||||||||||| |||||| ||||| |||||||  ||||||||||    
T  8388593 ggtcaaaattgggcaaaaggaccaaaaacgcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaa 8388500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 11288871 - 11288916
Alignment:
Q  164 caaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaa 209  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  11288871 caaaaagattaaagttgcaatgaggataaatcttagggggccaaaa 11288916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 24359938 - 24359866
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgta 223  Q
    |||||||||||||||||  || ||||  |||||  ||||||||||||| |||| |||||||||||||| ||||    
T  24359938 ggtcaaaattgaccaaagtgactaaagatgcaaataggctaaatcttagggggtcaaaattgtagtttttgta 24359866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 219
Target Start/End: Original strand, 2379931 - 2379962
Alignment:
Q  188 gctaaatcttaaggggccaaaattgtagtttc 219  Q
    ||||||||||||||||||||||||||||||||    
T  2379931 gctaaatcttaaggggccaaaattgtagtttc 2379962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 239
Target Start/End: Complemental strand, 29043536 - 29043441
Alignment:
Q  144 attgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaat 239  Q
    |||||| ||||||||||| | |||| ||| |||  | ||| | ||||||||||||  |||  ||||||||||||| ||||| ||||||||||||||    
T  29043536 attgactggtcaaaattgtctaaaaggatcaaagatacaaaggggctaaatcttagagggaaaaaattgtagtttttgtacatagggggtcaaaat 29043441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 23169962 - 23170028
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagttt 218  Q
    ||||||||||||||||| |||||||  ||||||   |||||||| |||||| |||||||| ||||||    
T  23169962 gtcaaaattgaccaaaaggattaaagatgcaattgagctaaatcataagggaccaaaattatagttt 23170028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 30335770 - 30335676
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||| ||  |||  ||||| | |||||||||||| ||||  ||||||||| ||| ||||||||| | | ||||||||||||    
T  30335770 ggtcaaaattgaacaaaaggaccaaagatgcaaaggggctaaatcttagggggttaaaattgtaatttttgtacttagcgagccaaaattgcaag 30335676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 34625171 - 34625237
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagttt 218  Q
    ||||||||||||||||| ||| ||| |||| | |||| |||||| || ||||| |||||||||||||    
T  34625171 gtcaaaattgaccaaaaggatcaaagttgcgaagagggtaaatcatagggggctaaaattgtagttt 34625237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 11283180 - 11283241
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgt 213  Q
    |||||||||||| |||| ||| |||||||||| | |||||||| ||| ||| ||||||||||    
T  11283180 gtcaaaattgactaaaatgatcaaaattgcaaaggggctaaattttaggggaccaaaattgt 11283241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 245
Target Start/End: Original strand, 24488663 - 24488743
Alignment:
Q  164 caaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||| ||| ||| |||||||| |||||||||||| |||| ||||||||| ||||   || |||||||| ||||||||||||    
T  24488663 caaaatgatgaaatttgcaatggggctaaatcttacgggg-caaaattgttgttttgatatttagggggccaaaattgcaag 24488743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 43661793 - 43661886
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    |||||||||||| ||||| ||  |||  ||||||  ||| |||||||| |||||||||||| |||||| ||||| ||| || | ||||||||||    
T  43661793 ggtcaaaattgatcaaaaggaccaaagatgcaattgggcgaaatcttagggggccaaaattttagtttttgtacatagaggattaaaattgcaa 43661886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 11456739 - 11456679
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattg 212  Q
    ||||||||||||||||| ||  |||  ||||||| ||||||||| || |||||||||||||    
T  11456739 gtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattg 11456679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 3849 - 3712
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||||||||||||||||||||||  |||||||||||      ||||||| ||||||||||||||||||||||||| |||||||| |||||||||||| ||    
T  3849 aattaaataattacacacgtggcgtgccacgtaggc------attgaccagtcaaaattgaccaaaaagattaaagttgcaatgcggctaaatcttaggg 3756  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    | | |||||| |||||||| |||| |||||| ||||||||||||    
T  3755 gactaaaattatagtttctttactcagggggccaaaattgcaag 3712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 4686 - 4792
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||||||||||| ||||||||||||  ||||| ||||||| |||||||| |||||||  |||  ||| ||||||||||||||||||| |||||||| |||    
T  4686 cgtaggcattgatcggtcaaaattggtcaaaaggattaaagttgcaatggggctaaaatttagagggtcaaaattgtagtttctgtatttagggggccaa 4785  T
Q  237 aattgca 243  Q
    |||||||    
T  4786 aattgca 4792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 137 - 244
Target Start/End: Original strand, 18732 - 18839
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||| |||||||||||||||| |||||| ||||| ||||||  |||    
T  18732 cgtaggcattgaccggtcaaaattgaccaaaatgattaaagttgcaatggggctaaattttaaggggccaaaattatagtttttgtacctaggggaccaa 18831  T
Q  237 aattgcaa 244  Q
    ||||||||    
T  18832 aattgcaa 18839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 17615 - 17507
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||||||||||||||||||||||||   ||||||||  ||||||||| | || ||| ||||  ||||||||||||||||||| ||||||||||||| |||    
T  17615 cgtaggcattgaccggtcaaaattggtaaaaaagatcgaaattgcaaaggggataattcttggggggccaaaattgtagtttttgtacttagggggccaa 17516  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  17515 aattgcaag 17507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 1829559 - 1829667
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||||||||||||||||||||||||||||||| ||  |||  ||||| | |||||||||||| ||||||||||||||||||| | |||||||||||||||    
T  1829559 cgtaggcattgaccggtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacttagggggtcaa 1829658  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  1829659 aattgcaag 1829667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 14822505 - 14822397
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||| |||||||||||||||||| ||  |||| ||||||| |||||||||| |||||||||| ||||||||||||||||||||| |||||| |||| |||    
T  14822505 cgtaagcattgaccggtcaaaatagattaaaaggattaaagttgcaatgagactaaatcttagggggccaaaattgtagtttctatacttatggggccaa 14822406  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  14822405 aattgcaag 14822397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 14823531 - 14823639
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    ||||||||||||||||||||||||||||||||  |||||  |||||| |   |||||||||| |||||||||||||||||||||||||||| ||||  ||    
T  14823531 cgtaggcattgaccggtcaaaattgaccaaaagaattaaggttgcaacggttctaaatcttagggggccaaaattgtagtttctgtacttaaggggctaa 14823630  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  14823631 aattgcaag 14823639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 16704453 - 16704561
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    ||||||||||||||  ||||||||||| |||| ||| | | |||||| ||||||||||||||| ||  |||||||||||||| |||||||||||||||||    
T  16704453 cgtaggcattgaccaatcaaaattgacaaaaaggatcatagttgcaaagaggctaaatcttaaaggatcaaaattgtagtttttgtacttagggggtcaa 16704552  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  16704553 aattgcaag 16704561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 10784739 - 10784630
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaag-attaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtca 235  Q
    |||||||||| |||||||||||||||  |||||| || ||| |||||| | |||||||||||  ||||||||||||||||||| | |||||||||||| |    
T  10784739 cgtaggcattaaccggtcaaaattgataaaaaaggatcaaagttgcaaaggggctaaatctttgggggccaaaattgtagtttttatacttagggggtta 10784640  T
Q  236 aaattgcaag 245  Q
    ||||||||||    
T  10784639 aaattgcaag 10784630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 26574763 - 26574656
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||||||||| | |||||||||||||| |||||||| ||| |||||| | ||||||||||||||||  ||||| |||||||| ||||||||| || ||||    
T  26574763 cgtaggcattaatcggtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttaagggatcaaaa-tgtagtttttgtacttagaggttcaa 26574665  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  26574664 aattgcaag 26574656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 26575010 - 26575118
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    ||||| ||||||||||||||||||| | |||| ||| ||| |||||| |  | ||||||||| ||||||||||||||||||| |||||||| ||||| ||    
T  26575010 cgtagacattgaccggtcaaaattggcaaaaaggatcaaagttgcaaaggagttaaatcttagggggccaaaattgtagtttttgtacttaaggggttaa 26575109  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  26575110 aattgcaag 26575118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 244
Target Start/End: Original strand, 10785874 - 10785976
Alignment:
Q  142 gcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    ||||||||  ||||||||||   |||| ||| ||| |||||| | |||||||||||||||||  ||||||||||||| |||||||||||||| |||||||    
T  10785874 gcattgactagtcaaaattggtaaaaaggatcaaagttgcaaaggggctaaatcttaaggggttaaaattgtagtttttgtacttagggggttaaaattg 10785973  T
Q  242 caa 244  Q
    |||    
T  10785974 caa 10785976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 3721743 - 3721649
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||  ||| |||||||| ||||||||||||||||| | ||||| | ||||  |||||||||||||||||||||||||    
T  3721743 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaaggggtctaaattatggttttggtacttagggggtcaaaattgcaag 3721649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 7316220 - 7316358
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||||| ||||||||||||||||  ||||||||||||| |  | | |   ||||||||||||||||| ||  | |  ||||| | |||||||||||||||    
T  7316220 aattaattaattacacacgtggcttgccacgtaggcgttg--aataa---gtcaaaattgaccaaaaggaccatagatgcaaaggggctaaatcttaagg 7316314  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| |||||  || |||||||| ||||||||||||    
T  7316315 ggccaaaattgtggtttcaatatttagggggccaaaattgcaag 7316358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 5658887 - 5658808
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttaggg 230  Q
    |||||||||||||||||| ||| ||| ||||||   ||||||||||||||||  |||||||||||||| ||||| |||||    
T  5658887 ggtcaaaattgaccaaaaggatcaaagttgcaaatgggctaaatcttaagggatcaaaattgtagtttttgtacataggg 5658808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 8659396 - 8659302
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||  ||| |||||||| |||||||||||| |||| | ||||||| ||||  |||||||||||| ||||||||||||    
T  8659396 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaag 8659302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 8822790 - 8822857
Alignment:
Q  178 ttgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||  |||||||||||| |||| | ||||||| ||||  |||||||||||||||||||||||||    
T  8822790 ttgcaattgggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaag 8822857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 8660174 - 8660267
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||| ||| ||||||||  ||||||||||| |||| | ||||||| ||||  ||||||| |||||||||||||||||    
T  8660174 ggtcaaaattggtcaaaaggatcaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtactta-ggggtcaaaattgcaag 8660267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 29473222 - 29473146
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgt 213  Q
    ||||||||||||||||| ||||||||| |||| ||| |||||||||| | ||| || ||||   |||||||||||||    
T  29473222 cgtaggcattgaccggtaaaaattgacaaaaaggatcaaaattgcaaaggggccaattcttggagggccaaaattgt 29473146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 8821977 - 8821910
Alignment:
Q  178 ttgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||  ||||||||||| |||| | ||||||| ||||  |||||||||||| ||||||||||||    
T  8821977 ttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaag 8821910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 7315054 - 7314917
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||||| ||||||||||||||||  ||||||||||||| |  | | |   ||||||||||||||||| ||  |||  ||||| | |||||||||||| ||    
T  7315054 aattaattaattacacacgtggcctgccacgtaggcgttg--aataa---gtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttaggg 7314960  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    || ||||||||| ||||   |||||| |||| ||||||||||||    
T  7314959 ggtcaaaattgttgttttgatactta-ggggccaaaattgcaag 7314917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 17496928 - 17496838
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagggg-ccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    ||||||||||| ||||| ||  |||  ||||| |||| ||||||||| |||| ||||||||| ||||| ||||||||| |||| |||||||    
T  17496928 gtcaaaattgatcaaaaggaccaaagatgcaaagaggttaaatcttaggggggccaaaattgcagtttttgtacttagagggttaaaattg 17496838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 34834549 - 34834643
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||  ||| |||||||| |||||||||||| |||| | ||||||| ||||   |||||||| | |||||||||||||    
T  34834549 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatacttaggagatcaaaattgcaag 34834643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 6842253 - 6842346
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    ||||||||||| |||||| ||| |||  |||||  || |||||| ||||||  | ||||||||||||| || || ||||||| |||||||||||    
T  6842253 ggtcaaaattggccaaaaggatcaaagatgcaaacagactaaattttaaggaactaaaattgtagtttttgcacatagggggccaaaattgcaa 6842346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 27437959 - 27437866
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    ||||||||||| |||||| ||  ||| |||||| |  ||||||||||| |||| |||||||||||||| | |   ||||||| |||||||||||    
T  27437959 ggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaa 27437866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 3333266 - 3333186
Alignment:
Q  164 caaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    |||||| || ||| |||||| ||||||||||| || || ||||||||| |||||| | | | |||||||||||| ||||||    
T  3333266 caaaaaaatcaaagttgcaaagaggctaaatcgtagggagccaaaattatagtttttattcatagggggtcaaatttgcaa 3333186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 31659753 - 31659664
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    ||||||||||||||||| ||| ||| |||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  31659753 gtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattg 31659664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 245
Target Start/End: Original strand, 14999111 - 14999219
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||| ||||||||||||||||||||||| ||| ||  |||  ||||| | |||||||||||| || |||||||||||||||| |||| ||||||||||||    
T  14999111 cgtaagcattgaccggtcaaaattgacctaaaggaacaaagatgcaaaggggctaaatcttagggcgccaaaattgtagtttttgtatttagggggtcaa 14999210  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  14999211 aattgcaag 14999219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 227
Target Start/End: Original strand, 34352742 - 34352832
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtactta 227  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||| ||| |||||||||  ||||||||||| |||||| ||||||||    
T  34352742 cgtaggcattgaccggtcaaaattggccaaaatgattaaagttgcaataaggttaaatcttagagggccaaaattatagtttatgtactta 34352832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 143 - 244
Target Start/End: Original strand, 42886248 - 42886349
Alignment:
Q  143 cattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgc 242  Q
    |||||| ||||||||||||||||||| ||| |||  |||||   |||||||||||| ||||| ||||||||||||| |||| ||||||||||||||||||    
T  42886248 cattgatcggtcaaaattgaccaaaatgatcaaagatgcaaatgggctaaatcttagggggctaaaattgtagtttttgtatttagggggtcaaaattgc 42886347  T
Q  243 aa 244  Q
    ||    
T  42886348 aa 42886349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 245
Target Start/End: Complemental strand, 22629661 - 22629523
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||||| ||||||||||||||||| ||||||||||||| |  | | |   ||||||||||||||||| ||  |||  ||||| | |||||||||||| ||    
T  22629661 aattaattaattacacacgtggcaggccacgtaggcgttg--aataa---gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggg 22629567  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| |||||||||| || ||||||| ||||    
T  22629566 ggccaaaattgtagtttttgtacttaggaggccaaaattacaag 22629523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 7500584 - 7500491
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| ||| |||  ||||| | |||||||||||| |||||||||||||| |||||| ||||||| || |||||||||||||    
T  7500584 gtcaaaattgaccaaaaggatcaaagatgcaaaggggctaaatcttagggggccaaaattgtggtttctatacttagaggatcaaaattgcaag 7500491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 18372428 - 18372521
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| ||  |||  | ||| | |||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  18372428 gtcaaaattgaccaaaaggaccaaagatacaaaggggctaaatcttagggggccaaaattgtagtttttgtacttagggggccaaaattgcaag 18372521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 18371554 - 18371461
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| ||| |||  |||||    ||||||||||| ||||||||||||||||||| |||||||| |||| ||||||||||||    
T  18371554 gtcaaaattgaccaaaaggatcaaagatgcaaatgtgctaaatcttagggggccaaaattgtagtttttgtacttaaggggccaaaattgcaag 18371461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 137 - 245
Target Start/End: Complemental strand, 34351633 - 34351529
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||||||||||||||||||||||||  ||||    ||||  ||||||| ||||||||||||||||||  ||||||||||||||| ||||| | | | |||    
T  34351633 cgtaggcattgaccggtcaaaattggtcaaa----ttaaggttgcaattaggctaaatcttaaggggttaaaattgtagtttctatacttggagagccaa 34351538  T
Q  237 aattgcaag 245  Q
    |||||||||    
T  34351537 aattgcaag 34351529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 3227238 - 3227144
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||  ||| |||||||| ||||||||||||||||| | ||||||| ||||  |||||||||||| ||||||||||||    
T  3227238 ggtcaaaattgttcaaaaggaccaaagttgcaatggggctaaatcttaagggggctaaattgtggttttggtacttagggggccaaaattgcaag 3227144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 31949453 - 31949359
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||| ||  ||| |||||||| |||||||||||| |||| | ||||||| ||||  |||||||||||| ||||||||||||    
T  31949453 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaag 31949359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 7501823 - 7501916
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| ||  |||  ||||| | ||||| ||||||||||||||||||||| ||||   ||||||||||| ||||||||||||    
T  7501823 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctacatcttaaggggccaaaattgttgttttgatacttagggggccaaaattgcaag 7501916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 22630423 - 22630516
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| ||  |||  | ||| |||||| ||||||| ||||| ||||||||||||| |||| |||||||| ||||||||||||    
T  22630423 gtcaaaattgaccaaaaggaccaaagatacaaagaggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaaaattgcaag 22630516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 47369911 - 47369818
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||||||||  | ||||  ||||| | ||||||||||||||||||||||||| |||||| |||||||| | ||  |||||||||||    
T  47369911 gtcaaaattgaccaaaataactaaagatgcaaaggggctaaatcttaaggggccaaaattatagtttttgtacttatgaggctaaaattgcaag 47369818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 770717 - 770791
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaatt 211  Q
    ||||| |||||||||||||||||||||||||| ||| |||  ||||| | |||||||| ||| ||||||||||||    
T  770717 cgtagacattgaccggtcaaaattgaccaaaatgatcaaagatgcaaaggggctaaattttagggggccaaaatt 770791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 3227564 - 3227658
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||| ||  ||| |||||||| |||||||||||| |||  | ||||||| ||||  |||||||||||| ||||||||||||    
T  3227564 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtacttagggggccaaaattgcaag 3227658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 17781792 - 17781698
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||  ||| |||||||| |||||||||||| ||||   ||||||| ||||  |||||||||||||||||||||||||    
T  17781792 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaag 17781698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 14998124 - 14998048
Alignment:
Q  138 gtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgta 214  Q
    |||||||||||||| | |||||||||||||| ||  |||  ||||| | |||||||||||| |||||||||||||||    
T  14998124 gtaggcattgaccgattaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgta 14998048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 128598 - 128664
Alignment:
Q  178 ttgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    |||||||| |||| ||||||| |||| | ||||||| ||||  ||||||||||||||||||||||||    
T  128598 ttgcaatggggctgaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaa 128664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 6618338 - 6618244
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||| ||| ||| |||||||||||| |||||||| || | |||||||||| ||| | || ||| ||  |||||||||||||    
T  6618338 ggtcaaaattgatcaaaatgatcaaatttgcaatgaggcaaaatcttagggagtcaaaattgtaatttttatatttaaggaatcaaaattgcaag 6618244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 31949772 - 31949866
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| ||||| ||  ||| |||||||| |||||||||||| |||  | ||||||| ||||  ||| |||||||| ||||||||||||    
T  31949772 ggtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtatttagggggccaaaattgcaag 31949866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 245
Target Start/End: Original strand, 17782559 - 17782617
Alignment:
Q  187 ggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||| |||| | ||||||| ||||  |||||||||||| ||||||||||||    
T  17782559 ggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaag 17782617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 47525337 - 47525431
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||  ||||| ||  ||| |||||||| |||||||||||| |||| | ||||||| ||||   |||||||||||  |||||||||||    
T  47525337 ggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatacttagggggctaaaattgcaag 47525431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 11658523 - 11658418
Alignment:
Q  139 taggcattgaccg-gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaa 237  Q
    ||||| ||||||| ||||||||||||  ||| || ||  ||| ||| | |||||| |||| |||| ||||||||||||||| ||||| |||||||  |||    
T  11658523 taggcgttgaccgagtcaaaattgacataaaggactactattacaaaggggctaattcttgagggaccaaaattgtagtttttgtacatagggggctaaa 11658424  T
Q  238 attgca 243  Q
    ||||||    
T  11658423 attgca 11658418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 31660991 - 31661072
Alignment:
Q  163 ccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    |||||| ||| ||| ||||||||||| ||||| ||| ||| | |||||| |||||| ||||| ||  |||||||||||||||    
T  31660991 ccaaaaggatcaaatttgcaatgaggttaaattttaggggactaaaattatagtttttgtacgtaaagggtcaaaattgcaa 31661072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 46482727 - 46482642
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaa 237  Q
    ||||||||||||||||| ||| |||| ||||| |  | ||||||||| |||   |||||| |||||| ||||| ||||||||||||    
T  46482727 gtcaaaattgaccaaaaggataaaaaatgcaaaggagataaatcttaggggattaaaattatagtttttgtacatagggggtcaaa 46482642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 245
Target Start/End: Complemental strand, 48933805 - 48933704
Alignment:
Q  142 gcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattg 241  Q
    ||||||| ||||||||||||   |||| ||| ||| |||||  |||| |||||||||||||  |||||||||||||| |||   || ||| |||||||||    
T  48933805 gcattgagcggtcaaaattggaaaaaaggatcaaagttgca--gaggataaatcttaagggatcaaaattgtagtttttgtttataagggatcaaaattg 48933708  T
Q  242 caag 245  Q
    ||||    
T  48933707 caag 48933704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 5408 - 5502
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||| ||||||| ||| ||| ||| |||| ||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  5408 ggtcaaaattaaccaaaaggatcaaatttgtaatggggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaag 5502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 37278 - 37185
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    |||||||||||||||||| ||| ||| || ||||| ||||||||| || |||||||||||||| |||| |||||||||||||||||||||||||    
T  37278 ggtcaaaattgaccaaaatgatgaaattttcaatggggctaaatcgtagggggccaaaattgttgtttttgtacttagggggtcaaaattgcaa 37185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 2435 - 2529
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||||||||| ||| ||| ||||||||  |||||||| || ||||||||||| || |||| ||||||||||||||||||||||||||    
T  2435 ggtcaaaattgaccaaaaggatgaaatttgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaag 2529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 7058 - 7152
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||||||||| ||| ||| ||||||||  |||||||| || ||||||||||| || |||| ||||||||||||||||||||||||||    
T  7058 ggtcaaaattgaccaaaaggatgaaatttgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaag 7152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 60221 - 60127
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||||||||||||  |||  ||||| | ||||||||| || |||| |||||||||||||| | ||| ||||||||||||||||||||    
T  60221 ggtcaaaattgaccaaaaagaccaaagatgcaaaggggctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgcaag 60127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 61429 - 61523
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||||||||| ||  |||  |||||   ||||||||| || |||||||||||| |||||| |||||||||||||  |||||||||||    
T  61429 ggtcaaaattgaccaaaaggaccaaagatgcaaaagggctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgcaag 61523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 241
Target Start/End: Original strand, 3264 - 3368
Alignment:
Q  137 cgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaa 236  Q
    |||||||||||||| || ||||||| | |||| ||| ||| |||||| | |||||||||||| ||| |||||||| |||||| ||||| || ||||||||    
T  3264 cgtaggcattgaccagtaaaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggaccaaaattatagtttttgtacctatggggtcaa 3363  T
Q  237 aattg 241  Q
    |||||    
T  3364 aattg 3368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 7394 - 7473
Alignment:
Q  160 tgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaat 239  Q
    |||| |||| ||| ||| |||||| | |||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  7394 tgactaaaaggatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaat 7473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 245
Target Start/End: Complemental strand, 19618 - 19525
Alignment:
Q  152 gtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    ||||||||||||||||| ||| |||  ||||| | || ||||||||| |||  |||||||||||||| | ||||||||||| ||||||||||||    
T  19618 gtcaaaattgaccaaaatgatcaaagatgcaaaggggttaaatcttaggggatcaaaattgtagtttttatacttagggggccaaaattgcaag 19525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 407 - 271
Alignment:
Q  102 aattaaataattacacacgtggcacgccacgtaggcgtaggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaagg 201  Q
    |||| ||||||||||||||||||| ||||| |||||||      ||||||||||||||||   |||| ||| |||  ||||| | |||||| ||||| ||    
T  407 aattcaataattacacacgtggcatgccacataggcgt------tgaccggtcaaaattgggaaaaaggatcaaatatgcaaaggggctaattcttaggg 314  T
Q  202 ggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    | |||||||| |||||| ||||| ||||||  |||||||||||    
T  313 gaccaaaattatagtttttgtacataggggaccaaaattgcaa 271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 1570 - 1476
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag 245  Q
    |||||||||||||||||| ||  |||  |||||   |||||||||||| |||| ||||||| |||||| | ||| ||||||||||||||||||||    
T  1570 ggtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttagggggtcaaaattatagtttttatacatagggggtcaaaattgcaag 1476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 245
Target Start/End: Complemental strand, 23222 - 23116
Alignment:
Q  139 taggcattgaccggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaa 238  Q
    ||||| |||||| ||||||||||| ||||| ||| ||| |||||||| ||||||| |||| |||  ||| ||||| ||||  |||||||| ||| |||||    
T  23222 taggctttgaccagtcaaaattgagcaaaatgataaaatttgcaatggggctaaagcttaggggagcaagattgttgttttggtacttagagggacaaaa 23123  T
Q  239 ttgcaag 245  Q
    |||||||    
T  23122 ttgcaag 23116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 6439 - 6393
Alignment:
Q  186 aggctaaatcttaaggggccaaaattgtagtttctgtacttaggggg 232  Q
    ||||||||||||| |||| |||||||||||||| ||||| |||||||    
T  6439 aggctaaatcttagggggtcaaaattgtagtttttgtacataggggg 6393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 49403 - 49496
Alignment:
Q  151 ggtcaaaattgaccaaaaagattaaaattgcaatgaggctaaatcttaaggggccaaaattgtagtttctgtacttagggggtcaaaattgcaa 244  Q
    ||||||||||| |||||| ||  ||| |||||| |  ||||||||||| |||| |||||||||||||| | |   ||||||| |||||||||||    
T  49403 ggtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaa 49496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University