View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17952_high_4 (Length: 679)

Name: NF17952_high_4
Description: NF17952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17952_high_4
NF17952_high_4
[»] chr2 (99 HSPs)
chr2 (17-551)||(41877446-41877989)
chr2 (345-548)||(6222537-6222736)
chr2 (272-443)||(23356983-23357156)
chr2 (272-499)||(24019845-24020084)
chr2 (271-376)||(13761748-13761853)
chr2 (363-470)||(41796714-41796821)
chr2 (300-445)||(4453520-4453666)
chr2 (344-445)||(25071413-25071514)
chr2 (299-445)||(29514831-29514977)
chr2 (363-470)||(6760576-6760683)
chr2 (278-445)||(10393032-10393200)
chr2 (300-445)||(21865244-21865391)
chr2 (363-470)||(40869331-40869438)
chr2 (368-470)||(5039842-5039944)
chr2 (368-470)||(43135684-43135786)
chr2 (299-445)||(43507559-43507706)
chr2 (363-445)||(44275724-44275806)
chr2 (300-445)||(3377390-3377536)
chr2 (300-445)||(9886990-9887136)
chr2 (300-445)||(15521477-15521623)
chr2 (300-445)||(16486880-16487026)
chr2 (300-445)||(28382677-28382823)
chr2 (300-445)||(36712533-36712679)
chr2 (300-445)||(38579005-38579151)
chr2 (306-445)||(650777-650917)
chr2 (363-470)||(4038312-4038419)
chr2 (363-470)||(4385497-4385604)
chr2 (363-470)||(31616358-31616465)
chr2 (300-445)||(37356166-37356313)
chr2 (363-445)||(2266149-2266231)
chr2 (363-445)||(2546321-2546403)
chr2 (363-445)||(6232277-6232359)
chr2 (363-445)||(7400388-7400470)
chr2 (363-445)||(8688959-8689041)
chr2 (363-445)||(8815275-8815357)
chr2 (363-445)||(13111739-13111821)
chr2 (363-445)||(17263750-17263832)
chr2 (363-445)||(24402049-24402131)
chr2 (363-445)||(38842897-38842979)
chr2 (363-445)||(39167813-39167895)
chr2 (363-445)||(41322818-41322900)
chr2 (389-470)||(6153434-6153515)
chr2 (366-467)||(16669117-16669218)
chr2 (309-445)||(26911519-26911655)
chr2 (363-445)||(36999551-36999633)
chr2 (363-445)||(38880779-38880861)
chr2 (363-445)||(40024939-40025021)
chr2 (345-445)||(15250149-15250249)
chr2 (368-452)||(42132734-42132818)
chr2 (374-444)||(9053128-9053198)
chr2 (363-456)||(34884872-34884965)
chr2 (363-456)||(43285680-43285773)
chr2 (363-439)||(7213664-7213740)
chr2 (361-445)||(7823544-7823628)
chr2 (363-445)||(8070617-8070699)
chr2 (363-445)||(10839577-10839659)
chr2 (372-445)||(2047318-2047391)
chr2 (361-470)||(2758891-2759000)
chr2 (296-441)||(5520069-5520215)
chr2 (400-484)||(6807492-6807576)
chr2 (363-445)||(4055952-4056034)
chr2 (125-199)||(33810616-33810690)
chr2 (397-470)||(13351576-13351649)
chr2 (399-499)||(13761856-13761954)
chr2 (361-445)||(598951-599035)
chr2 (369-445)||(10727898-10727974)
chr2 (363-445)||(13527901-13527983)
chr2 (388-470)||(18710257-18710339)
chr2 (125-201)||(12457017-12457093)
chr2 (364-456)||(37674482-37674574)
chr2 (388-443)||(7569853-7569908)
chr2 (400-470)||(3337166-3337236)
chr2 (368-445)||(8340046-8340123)
chr2 (376-453)||(10361481-10361557)
chr2 (126-194)||(9154142-9154210)
chr2 (141-201)||(43939437-43939497)
chr2 (126-201)||(36887321-36887396)
chr2 (363-445)||(2221451-2221533)
chr2 (368-453)||(2689059-2689143)
chr2 (124-201)||(12890263-12890340)
chr2 (363-404)||(18212182-18212223)
chr2 (299-332)||(22375954-22375987)
chr2 (123-202)||(19246480-19246560)
chr2 (142-202)||(21924835-21924895)
chr2 (126-202)||(38985126-38985202)
chr2 (136-199)||(14949244-14949307)
chr2 (434-484)||(2757312-2757362)
chr2 (368-478)||(33850088-33850198)
chr2 (371-445)||(39675089-39675163)
chr2 (300-333)||(2546434-2546467)
chr2 (300-333)||(5039773-5039806)
chr2 (300-333)||(13111853-13111886)
chr2 (141-201)||(2485299-2485359)
chr2 (361-397)||(2757275-2757311)
chr2 (402-442)||(14452413-14452453)
chr2 (174-202)||(17663844-17663872)
chr2 (174-202)||(20362202-20362230)
chr2 (301-333)||(31616496-31616528)
chr2 (293-333)||(40869469-40869509)
[»] scaffold0343 (1 HSPs)
scaffold0343 (271-529)||(9201-9460)
[»] scaffold0016 (2 HSPs)
scaffold0016 (272-548)||(84227-84502)
scaffold0016 (363-445)||(93386-93468)
[»] chr4 (124 HSPs)
chr4 (345-548)||(20148700-20148903)
chr4 (303-493)||(36196874-36197065)
chr4 (430-548)||(30623276-30623391)
chr4 (363-529)||(42085638-42085805)
chr4 (300-445)||(21633817-21633963)
chr4 (346-470)||(32101711-32101835)
chr4 (363-470)||(35580921-35581028)
chr4 (363-470)||(55829065-55829172)
chr4 (300-470)||(55495856-55496027)
chr4 (300-477)||(35777355-35777533)
chr4 (369-470)||(40497372-40497473)
chr4 (300-445)||(42116893-42117039)
chr4 (300-445)||(46895280-46895426)
chr4 (361-493)||(20511468-20511600)
chr4 (363-470)||(37115259-37115366)
chr4 (299-445)||(4391709-4391856)
chr4 (368-470)||(4465447-4465549)
chr4 (363-445)||(9031996-9032078)
chr4 (299-445)||(11151940-11152087)
chr4 (271-445)||(35190617-35190791)
chr4 (300-445)||(39087559-39087705)
chr4 (300-445)||(53407186-53407332)
chr4 (361-445)||(4939387-4939471)
chr4 (361-445)||(5465411-5465495)
chr4 (306-470)||(31678972-31679137)
chr4 (306-445)||(8829816-8829956)
chr4 (345-484)||(11050360-11050499)
chr4 (346-445)||(22430679-22430778)
chr4 (362-445)||(27185633-27185716)
chr4 (363-470)||(43225653-43225760)
chr4 (306-445)||(45906142-45906282)
chr4 (299-445)||(3009707-3009854)
chr4 (363-445)||(4355593-4355675)
chr4 (363-445)||(4517192-4517274)
chr4 (363-445)||(12233968-12234050)
chr4 (363-445)||(21369941-21370023)
chr4 (363-445)||(22892589-22892671)
chr4 (363-445)||(22944253-22944335)
chr4 (363-445)||(25440485-25440567)
chr4 (363-445)||(28307316-28307398)
chr4 (363-445)||(31338501-31338583)
chr4 (363-445)||(52670055-52670137)
chr4 (299-445)||(55684691-55684838)
chr4 (363-445)||(55764620-55764702)
chr4 (363-445)||(56270092-56270174)
chr4 (300-445)||(7706369-7706515)
chr4 (300-445)||(18582841-18582987)
chr4 (300-445)||(27397767-27397913)
chr4 (365-470)||(33005084-33005189)
chr4 (368-445)||(33115041-33115118)
chr4 (361-470)||(37047088-37047197)
chr4 (364-445)||(43078197-43078278)
chr4 (300-445)||(56372432-56372578)
chr4 (361-445)||(25235204-25235288)
chr4 (306-470)||(37831925-37832089)
chr4 (361-445)||(55856528-55856612)
chr4 (299-454)||(29663925-29664081)
chr4 (363-445)||(8941965-8942047)
chr4 (363-445)||(11600744-11600826)
chr4 (363-445)||(19513883-19513965)
chr4 (363-445)||(23867870-23867952)
chr4 (371-445)||(29413600-29413674)
chr4 (363-445)||(37970355-37970437)
chr4 (307-445)||(52708000-52708138)
chr4 (363-445)||(55358339-55358421)
chr4 (368-445)||(23113477-23113554)
chr4 (368-445)||(26826587-26826664)
chr4 (368-445)||(30366147-30366224)
chr4 (372-452)||(44525707-44525787)
chr4 (346-438)||(50502284-50502376)
chr4 (369-445)||(51011066-51011142)
chr4 (363-445)||(9043611-9043693)
chr4 (363-445)||(44442143-44442224)
chr4 (300-470)||(47417451-47417622)
chr4 (371-484)||(8716880-8716993)
chr4 (372-445)||(15636012-15636085)
chr4 (300-445)||(22038358-22038504)
chr4 (371-456)||(31953224-31953309)
chr4 (363-439)||(35468076-35468152)
chr4 (363-445)||(4392727-4392808)
chr4 (368-445)||(23162667-23162745)
chr4 (363-445)||(35822300-35822382)
chr4 (388-470)||(45780733-45780815)
chr4 (361-467)||(48056585-48056691)
chr4 (361-467)||(31435065-31435171)
chr4 (365-459)||(38048864-38048958)
chr4 (373-499)||(41864027-41864153)
chr4 (125-201)||(32564829-32564905)
chr4 (125-201)||(7209057-7209133)
chr4 (385-445)||(24954222-24954282)
chr4 (385-445)||(42124680-42124740)
chr4 (385-456)||(17715647-17715718)
chr4 (366-455)||(1031352-1031440)
chr4 (299-396)||(33005178-33005276)
chr4 (372-445)||(36486386-36486459)
chr4 (384-452)||(53224309-53224377)
chr4 (432-499)||(3932189-3932256)
chr4 (278-333)||(17715559-17715614)
chr4 (371-422)||(53273187-53273238)
chr4 (278-332)||(3932351-3932405)
chr4 (135-201)||(4473058-4473124)
chr4 (268-314)||(6902249-6902295)
chr4 (368-454)||(39068892-39068978)
chr4 (385-478)||(40119903-40120003)
chr4 (368-417)||(29656722-29656771)
chr4 (361-470)||(30562825-30562933)
chr4 (389-445)||(36008019-36008075)
chr4 (373-445)||(37337710-37337782)
chr4 (273-333)||(44525584-44525644)
chr4 (432-499)||(21633756-21633823)
chr4 (273-332)||(24954316-24954375)
chr4 (386-444)||(26443389-26443447)
chr4 (299-333)||(29413527-29413561)
chr4 (299-333)||(36008119-36008153)
chr4 (367-445)||(52713559-52713637)
chr4 (300-333)||(9043725-9043758)
chr4 (300-333)||(11600680-11600713)
chr4 (300-333)||(28307252-28307285)
chr4 (272-333)||(42124773-42124834)
chr4 (300-333)||(45780851-45780884)
chr4 (300-333)||(53273115-53273148)
chr4 (273-313)||(30623376-30623416)
chr4 (169-201)||(31486447-31486479)
chr4 (417-445)||(38759604-38759632)
[»] chr8 (78 HSPs)
chr8 (307-520)||(2855090-2855303)
chr8 (295-470)||(39746914-39747090)
chr8 (296-484)||(3427582-3427771)
chr8 (307-470)||(13969982-13970146)
chr8 (299-445)||(27781101-27781248)
chr8 (341-445)||(9370316-9370421)
chr8 (300-445)||(31478076-31478222)
chr8 (300-445)||(32541223-32541369)
chr8 (273-445)||(29189726-29189899)
chr8 (363-470)||(9211050-9211157)
chr8 (363-470)||(31688025-31688132)
chr8 (363-470)||(36112816-36112923)
chr8 (299-445)||(7378847-7378994)
chr8 (300-470)||(43276746-43276917)
chr8 (300-445)||(6338318-6338464)
chr8 (368-445)||(16422898-16422975)
chr8 (300-445)||(31581694-31581840)
chr8 (363-452)||(32099601-32099690)
chr8 (300-445)||(45141455-45141601)
chr8 (273-445)||(3511191-3511364)
chr8 (361-445)||(8270968-8271052)
chr8 (363-459)||(37587704-37587800)
chr8 (300-445)||(39871265-39871410)
chr8 (363-470)||(1893816-1893923)
chr8 (300-443)||(17081654-17081798)
chr8 (306-445)||(36681447-36681587)
chr8 (306-445)||(39702312-39702452)
chr8 (363-470)||(41313439-41313546)
chr8 (306-445)||(44827317-44827457)
chr8 (363-445)||(2642418-2642500)
chr8 (363-445)||(10618870-10618952)
chr8 (363-445)||(28716728-28716810)
chr8 (363-445)||(41693906-41693988)
chr8 (363-445)||(42142735-42142817)
chr8 (300-445)||(25023306-25023452)
chr8 (361-445)||(11741103-11741187)
chr8 (363-443)||(28709371-28709451)
chr8 (363-445)||(17115602-17115684)
chr8 (363-445)||(23676936-23677018)
chr8 (371-445)||(37560529-37560603)
chr8 (363-445)||(40223084-40223165)
chr8 (363-445)||(44157261-44157343)
chr8 (363-470)||(34395321-34395429)
chr8 (272-376)||(39677348-39677453)
chr8 (363-445)||(24652331-24652413)
chr8 (363-445)||(35243352-35243434)
chr8 (363-445)||(38171427-38171509)
chr8 (363-445)||(38780725-38780807)
chr8 (363-445)||(39320066-39320148)
chr8 (125-201)||(15196500-15196576)
chr8 (361-445)||(36590199-36590282)
chr8 (361-445)||(43849207-43849291)
chr8 (371-445)||(22877925-22877999)
chr8 (361-458)||(1363779-1363876)
chr8 (369-445)||(11298041-11298117)
chr8 (361-445)||(22957371-22957455)
chr8 (380-445)||(44263388-44263453)
chr8 (385-445)||(39677442-39677502)
chr8 (124-202)||(38125583-38125661)
chr8 (384-445)||(13888326-13888387)
chr8 (385-470)||(42203378-42203463)
chr8 (385-440)||(44318316-44318371)
chr8 (400-470)||(2732320-2732390)
chr8 (368-445)||(40045469-40045546)
chr8 (363-445)||(40551873-40551954)
chr8 (361-441)||(26036984-26037064)
chr8 (136-191)||(24802565-24802620)
chr8 (361-445)||(8436524-8436608)
chr8 (413-453)||(14171676-14171716)
chr8 (299-333)||(41694022-41694056)
chr8 (432-493)||(39677496-39677557)
chr8 (300-332)||(1893956-1893988)
chr8 (389-445)||(10651115-10651171)
chr8 (392-452)||(16831619-16831679)
chr8 (369-433)||(26293837-26293901)
chr8 (369-433)||(26307094-26307158)
chr8 (402-442)||(38364417-38364457)
chr8 (402-442)||(43129704-43129744)
[»] chr6 (56 HSPs)
chr6 (345-527)||(6104589-6104771)
chr6 (307-470)||(23648201-23648365)
chr6 (345-443)||(20563440-20563538)
chr6 (299-470)||(10856132-10856304)
chr6 (300-470)||(31099990-31100161)
chr6 (296-445)||(28076419-28076569)
chr6 (300-445)||(34232915-34233061)
chr6 (363-445)||(5943056-5943138)
chr6 (300-445)||(2442425-2442571)
chr6 (300-445)||(30811149-30811295)
chr6 (363-452)||(33453800-33453889)
chr6 (299-444)||(34439682-34439828)
chr6 (300-445)||(14227536-14227681)
chr6 (361-445)||(15591151-15591235)
chr6 (300-445)||(558360-558507)
chr6 (306-445)||(12297371-12297511)
chr6 (363-445)||(20805054-20805136)
chr6 (300-470)||(31451930-31452100)
chr6 (363-445)||(32731823-32731905)
chr6 (368-445)||(34685016-34685093)
chr6 (361-445)||(2970737-2970821)
chr6 (345-445)||(5301602-5301702)
chr6 (369-445)||(33540726-33540802)
chr6 (363-445)||(5681584-5681666)
chr6 (363-445)||(6709696-6709778)
chr6 (363-445)||(7317611-7317693)
chr6 (363-445)||(12140879-12140961)
chr6 (363-445)||(12432621-12432703)
chr6 (363-445)||(21894316-21894398)
chr6 (363-445)||(31049398-31049480)
chr6 (296-445)||(11015586-11015736)
chr6 (299-445)||(3108006-3108154)
chr6 (363-445)||(9896770-9896852)
chr6 (369-452)||(3636634-3636717)
chr6 (300-417)||(1806343-1806461)
chr6 (363-453)||(5893886-5893976)
chr6 (368-445)||(7292549-7292626)
chr6 (361-470)||(26561412-26561521)
chr6 (368-440)||(1225501-1225573)
chr6 (389-445)||(29414924-29414980)
chr6 (389-445)||(34904037-34904093)
chr6 (366-445)||(32563244-32563323)
chr6 (271-321)||(22756519-22756569)
chr6 (363-445)||(29823036-29823118)
chr6 (365-470)||(15131361-15131466)
chr6 (155-202)||(31144695-31144742)
chr6 (138-204)||(30416920-30416986)
chr6 (273-314)||(3832407-3832448)
chr6 (278-333)||(19178303-19178358)
chr6 (369-444)||(19415351-19415426)
chr6 (299-333)||(34685128-34685162)
chr6 (386-439)||(11443033-11443086)
chr6 (300-333)||(29823149-29823182)
chr6 (300-333)||(32731759-32731792)
chr6 (300-333)||(34903960-34903993)
chr6 (427-467)||(34544341-34544381)
[»] scaffold0041 (1 HSPs)
scaffold0041 (345-548)||(72655-72866)
[»] chr7 (79 HSPs)
chr7 (345-548)||(40893418-40893629)
chr7 (300-470)||(42375766-42375936)
chr7 (300-445)||(47470970-47471116)
chr7 (296-445)||(23029786-23029937)
chr7 (363-499)||(11465993-11466129)
chr7 (278-445)||(1342755-1342923)
chr7 (363-470)||(17192425-17192532)
chr7 (343-470)||(35000757-35000884)
chr7 (363-470)||(47587088-47587195)
chr7 (299-445)||(31511300-31511447)
chr7 (368-445)||(21254705-21254782)
chr7 (300-445)||(27655681-27655827)
chr7 (307-484)||(27869531-27869709)
chr7 (300-445)||(36246384-36246530)
chr7 (300-445)||(42587391-42587537)
chr7 (300-445)||(43254104-43254250)
chr7 (300-445)||(45686924-45687070)
chr7 (361-470)||(46757773-46757882)
chr7 (300-445)||(43134406-43134551)
chr7 (361-445)||(44596673-44596757)
chr7 (363-470)||(19831973-19832080)
chr7 (363-445)||(482990-483072)
chr7 (363-445)||(21374698-21374780)
chr7 (299-445)||(27089664-27089811)
chr7 (299-445)||(27188490-27188637)
chr7 (363-445)||(33026941-33027023)
chr7 (363-445)||(33203676-33203758)
chr7 (363-445)||(35587644-35587726)
chr7 (363-445)||(40637168-40637250)
chr7 (368-445)||(9487477-9487554)
chr7 (300-445)||(10312037-10312183)
chr7 (368-445)||(12345075-12345152)
chr7 (300-445)||(17844545-17844691)
chr7 (300-470)||(36436155-36436325)
chr7 (361-445)||(46879532-46879616)
chr7 (363-470)||(21313772-21313879)
chr7 (363-445)||(21742037-21742119)
chr7 (363-445)||(28425619-28425701)
chr7 (363-445)||(34709298-34709380)
chr7 (363-445)||(36407293-36407375)
chr7 (363-445)||(40106013-40106095)
chr7 (363-445)||(40258922-40259004)
chr7 (363-445)||(45222081-45222163)
chr7 (368-445)||(48832061-48832138)
chr7 (363-445)||(9485781-9485863)
chr7 (363-445)||(44743782-44743864)
chr7 (363-445)||(48313432-48313514)
chr7 (345-470)||(22642234-22642359)
chr7 (361-445)||(19757524-19757608)
chr7 (374-445)||(38531191-38531261)
chr7 (361-468)||(45672357-45672464)
chr7 (363-445)||(48590779-48590861)
chr7 (363-445)||(49148397-49148479)
chr7 (361-445)||(36612119-36612203)
chr7 (278-445)||(791341-791509)
chr7 (372-439)||(48620531-48620598)
chr7 (372-452)||(38481354-38481434)
chr7 (391-470)||(47584185-47584264)
chr7 (368-425)||(21316612-21316669)
chr7 (361-445)||(22621466-22621550)
chr7 (382-445)||(24170860-24170923)
chr7 (126-201)||(28885482-28885557)
chr7 (123-194)||(31448371-31448442)
chr7 (368-442)||(39229953-39230027)
chr7 (136-201)||(19989079-19989144)
chr7 (361-406)||(21358647-21358692)
chr7 (306-403)||(32168840-32168938)
chr7 (389-470)||(39698930-39699011)
chr7 (363-410)||(24170809-24170856)
chr7 (417-455)||(7633780-7633818)
chr7 (140-198)||(10248806-10248864)
chr7 (299-333)||(35587579-35587613)
chr7 (376-442)||(41406276-41406341)
chr7 (136-201)||(9077535-9077600)
chr7 (178-211)||(25098234-25098267)
chr7 (300-333)||(28425732-28425765)
chr7 (300-333)||(40637281-40637314)
chr7 (369-445)||(21740154-21740229)
chr7 (414-470)||(32168935-32168991)
[»] chr5 (91 HSPs)
chr5 (278-445)||(16474749-16474917)
chr5 (385-529)||(4657502-4657652)
chr5 (299-470)||(11100728-11100900)
chr5 (306-452)||(6893363-6893509)
chr5 (300-445)||(13228464-13228609)
chr5 (278-445)||(5381935-5382102)
chr5 (307-484)||(648538-648716)
chr5 (363-445)||(7651704-7651786)
chr5 (363-470)||(4221439-4221546)
chr5 (300-445)||(19347705-19347852)
chr5 (300-470)||(2671414-2671585)
chr5 (295-445)||(5997885-5998036)
chr5 (363-445)||(10697333-10697415)
chr5 (363-445)||(15530499-15530581)
chr5 (300-445)||(2236507-2236653)
chr5 (368-445)||(6603901-6603978)
chr5 (300-445)||(12774576-12774722)
chr5 (345-470)||(13936238-13936363)
chr5 (300-445)||(14647348-14647494)
chr5 (300-445)||(24793972-24794118)
chr5 (300-470)||(29392073-29392243)
chr5 (300-445)||(30299698-30299844)
chr5 (299-456)||(39246817-39246974)
chr5 (363-470)||(9587152-9587259)
chr5 (278-445)||(26699097-26699265)
chr5 (278-445)||(26968830-26968998)
chr5 (363-445)||(1174848-1174930)
chr5 (363-445)||(4379322-4379404)
chr5 (363-445)||(8023975-8024057)
chr5 (363-445)||(9160683-9160765)
chr5 (363-445)||(15443520-15443602)
chr5 (363-445)||(27130397-27130479)
chr5 (363-445)||(31168978-31169060)
chr5 (363-445)||(32381665-32381747)
chr5 (363-445)||(32382913-32382995)
chr5 (363-445)||(35235718-35235800)
chr5 (363-445)||(35236658-35236740)
chr5 (363-445)||(36685880-36685962)
chr5 (363-445)||(39744533-39744615)
chr5 (363-445)||(43402508-43402590)
chr5 (300-445)||(1711194-1711340)
chr5 (300-445)||(12713312-12713458)
chr5 (300-445)||(30412603-30412749)
chr5 (361-445)||(39275485-39275569)
chr5 (370-445)||(3670349-3670424)
chr5 (361-456)||(13921787-13921882)
chr5 (363-445)||(2178824-2178906)
chr5 (363-445)||(5591652-5591734)
chr5 (363-445)||(12363603-12363685)
chr5 (363-445)||(19525813-19525895)
chr5 (363-445)||(22977196-22977278)
chr5 (369-443)||(30774185-30774259)
chr5 (363-445)||(35640004-35640086)
chr5 (363-445)||(36027982-36028064)
chr5 (278-445)||(11062898-11063067)
chr5 (361-445)||(3037416-3037500)
chr5 (371-470)||(13156852-13156951)
chr5 (363-445)||(5521362-5521444)
chr5 (363-445)||(19956299-19956380)
chr5 (375-470)||(3669617-3669712)
chr5 (368-445)||(6280446-6280523)
chr5 (368-445)||(9627145-9627222)
chr5 (372-445)||(11663882-11663955)
chr5 (363-437)||(23920521-23920595)
chr5 (366-468)||(32321630-32321732)
chr5 (372-470)||(11780118-11780216)
chr5 (136-201)||(21743014-21743079)
chr5 (375-456)||(41471889-41471970)
chr5 (385-445)||(6349426-6349486)
chr5 (365-445)||(27005845-27005925)
chr5 (346-453)||(2497610-2497717)
chr5 (121-191)||(8564904-8564974)
chr5 (371-445)||(42323598-42323672)
chr5 (278-333)||(22977329-22977384)
chr5 (412-466)||(8638234-8638288)
chr5 (139-201)||(32636225-32636287)
chr5 (300-333)||(9587291-9587324)
chr5 (391-456)||(25872208-25872273)
chr5 (361-445)||(4875706-4875790)
chr5 (361-441)||(18480557-18480637)
chr5 (345-376)||(4657641-4657672)
chr5 (385-484)||(7896599-7896697)
chr5 (300-333)||(4221577-4221610)
chr5 (300-333)||(5591588-5591621)
chr5 (168-201)||(8564936-8564969)
chr5 (300-333)||(39744646-39744679)
chr5 (126-194)||(9475083-9475151)
chr5 (173-201)||(27642721-27642749)
chr5 (300-332)||(32382849-32382881)
chr5 (361-433)||(33694738-33694810)
chr5 (400-444)||(41686779-41686823)
[»] chr1 (99 HSPs)
chr1 (285-443)||(52703098-52703257)
chr1 (271-445)||(7781149-7781324)
chr1 (299-470)||(38967424-38967595)
chr1 (300-470)||(13121544-13121715)
chr1 (300-470)||(18347376-18347546)
chr1 (296-478)||(34086966-34087149)
chr1 (299-445)||(3270662-3270808)
chr1 (361-478)||(25134914-25135031)
chr1 (295-470)||(44718931-44719107)
chr1 (363-445)||(49822152-49822234)
chr1 (361-470)||(25602052-25602161)
chr1 (300-445)||(29586162-29586308)
chr1 (361-445)||(322931-323015)
chr1 (345-445)||(34318456-34318556)
chr1 (300-445)||(36301090-36301235)
chr1 (363-470)||(17046797-17046904)
chr1 (368-470)||(7710914-7711016)
chr1 (300-470)||(39826604-39826775)
chr1 (300-445)||(1918029-1918175)
chr1 (300-445)||(29374334-29374480)
chr1 (300-445)||(42064302-42064448)
chr1 (342-466)||(44956325-44956449)
chr1 (375-470)||(40719554-40719649)
chr1 (363-445)||(2497990-2498072)
chr1 (363-445)||(19898893-19898975)
chr1 (363-445)||(26204342-26204424)
chr1 (363-445)||(26843819-26843901)
chr1 (363-445)||(31150410-31150492)
chr1 (363-445)||(38676557-38676639)
chr1 (363-445)||(43727089-43727171)
chr1 (363-445)||(44909908-44909990)
chr1 (299-445)||(50351035-50351182)
chr1 (368-445)||(36838680-36838757)
chr1 (363-456)||(47134505-47134598)
chr1 (300-445)||(49220458-49220604)
chr1 (300-445)||(30721608-30721755)
chr1 (371-470)||(50540848-50540947)
chr1 (363-445)||(15313311-15313393)
chr1 (363-445)||(15348892-15348974)
chr1 (363-445)||(17499870-17499952)
chr1 (363-445)||(29704069-29704151)
chr1 (363-445)||(33524596-33524678)
chr1 (371-445)||(34319465-34319539)
chr1 (372-445)||(30774158-30774231)
chr1 (345-445)||(28868996-28869096)
chr1 (369-445)||(40887949-40888025)
chr1 (369-445)||(49185170-49185246)
chr1 (361-445)||(50171282-50171366)
chr1 (363-445)||(3661013-3661095)
chr1 (363-445)||(22098986-22099068)
chr1 (363-445)||(32368324-32368406)
chr1 (363-445)||(37703738-37703820)
chr1 (363-469)||(46056387-46056493)
chr1 (371-445)||(51422969-51423043)
chr1 (372-445)||(1507728-1507801)
chr1 (368-445)||(5697550-5697627)
chr1 (371-484)||(49240227-49240340)
chr1 (371-445)||(3391196-3391270)
chr1 (363-445)||(16085596-16085678)
chr1 (363-445)||(36043285-36043367)
chr1 (363-445)||(37672335-37672417)
chr1 (363-445)||(42614120-42614202)
chr1 (300-445)||(8221220-8221366)
chr1 (363-452)||(30495173-30495262)
chr1 (364-445)||(46087985-46088066)
chr1 (365-445)||(13570778-13570858)
chr1 (363-445)||(46369875-46369954)
chr1 (365-447)||(10628812-10628894)
chr1 (368-470)||(42963901-42964003)
chr1 (376-445)||(33151975-33152044)
chr1 (372-445)||(41004978-41005051)
chr1 (363-439)||(9769964-9770040)
chr1 (363-452)||(28429097-28429180)
chr1 (363-445)||(39583164-39583246)
chr1 (371-445)||(46928969-46929043)
chr1 (369-453)||(2028953-2029037)
chr1 (388-452)||(7024916-7024980)
chr1 (121-201)||(7255134-7255214)
chr1 (382-470)||(9169142-9169230)
chr1 (366-453)||(31259554-31259641)
chr1 (372-445)||(36379131-36379204)
chr1 (392-444)||(40935893-40935945)
chr1 (300-403)||(33561922-33562026)
chr1 (136-195)||(46836383-46836442)
chr1 (272-314)||(28429017-28429059)
chr1 (366-470)||(27659325-27659429)
chr1 (300-403)||(2479164-2479268)
chr1 (386-445)||(6814118-6814177)
chr1 (299-333)||(46369808-46369842)
chr1 (300-333)||(17046733-17046766)
chr1 (300-333)||(26843755-26843788)
chr1 (300-333)||(31150523-31150556)
chr1 (300-333)||(36838793-36838826)
chr1 (126-187)||(42966361-42966422)
chr1 (137-201)||(6380162-6380226)
chr1 (389-445)||(9894931-9894987)
chr1 (141-205)||(24679109-24679173)
chr1 (300-332)||(26204278-26204310)
chr1 (136-196)||(28681091-28681151)
[»] chr3 (106 HSPs)
chr3 (300-470)||(8872874-8873045)
chr3 (271-470)||(193369-193569)
chr3 (299-470)||(37713945-37714117)
chr3 (272-445)||(44947206-44947380)
chr3 (361-478)||(52868151-52868268)
chr3 (299-456)||(48942991-48943147)
chr3 (300-470)||(42217664-42217835)
chr3 (363-445)||(51003312-51003394)
chr3 (300-445)||(37088285-37088431)
chr3 (300-445)||(45345013-45345159)
chr3 (363-470)||(37489904-37490011)
chr3 (363-470)||(44748766-44748873)
chr3 (363-445)||(46972098-46972180)
chr3 (363-445)||(49853048-49853130)
chr3 (363-445)||(53779096-53779178)
chr3 (300-445)||(16127144-16127290)
chr3 (300-445)||(19948323-19948469)
chr3 (300-445)||(29081286-29081432)
chr3 (300-445)||(35499602-35499748)
chr3 (300-445)||(40563368-40563514)
chr3 (363-456)||(43525808-43525901)
chr3 (300-445)||(44845625-44845771)
chr3 (306-470)||(46247944-46248109)
chr3 (273-445)||(52225259-52225432)
chr3 (306-445)||(37528728-37528868)
chr3 (363-470)||(40480001-40480108)
chr3 (363-470)||(54541915-54542022)
chr3 (363-445)||(2121892-2121974)
chr3 (363-445)||(2579932-2580014)
chr3 (363-445)||(4240343-4240425)
chr3 (363-445)||(24536559-24536641)
chr3 (363-445)||(28676895-28676977)
chr3 (363-445)||(47897611-47897693)
chr3 (299-445)||(52794895-52795042)
chr3 (300-445)||(26540961-26541107)
chr3 (368-445)||(29718206-29718283)
chr3 (300-445)||(38185771-38185917)
chr3 (363-452)||(41246314-41246403)
chr3 (368-445)||(41518431-41518508)
chr3 (300-445)||(45368611-45368757)
chr3 (363-452)||(46318757-46318846)
chr3 (345-445)||(29203032-29203132)
chr3 (369-445)||(30864497-30864573)
chr3 (368-452)||(39876684-39876768)
chr3 (363-470)||(21707216-21707323)
chr3 (361-444)||(30548807-30548890)
chr3 (312-470)||(2598608-2598767)
chr3 (363-445)||(2851882-2851964)
chr3 (363-445)||(21603863-21603945)
chr3 (363-445)||(50317034-50317116)
chr3 (363-445)||(52166095-52166177)
chr3 (363-445)||(52857961-52858043)
chr3 (363-445)||(54672185-54672267)
chr3 (299-445)||(55305114-55305261)
chr3 (300-445)||(25570380-25570526)
chr3 (363-456)||(33897887-33897980)
chr3 (368-445)||(42497064-42497141)
chr3 (365-445)||(45693391-45693471)
chr3 (363-443)||(48378291-48378371)
chr3 (369-445)||(50499833-50499909)
chr3 (363-445)||(46627502-46627584)
chr3 (363-445)||(51709076-51709158)
chr3 (361-445)||(7041124-7041208)
chr3 (369-445)||(12063733-12063809)
chr3 (345-445)||(32026414-32026514)
chr3 (363-445)||(33391968-33392050)
chr3 (361-439)||(37713151-37713229)
chr3 (363-445)||(38891991-38892073)
chr3 (298-499)||(39719353-39719554)
chr3 (306-445)||(24628204-24628344)
chr3 (345-484)||(52595300-52595439)
chr3 (271-333)||(31558316-31558378)
chr3 (368-445)||(42465032-42465109)
chr3 (273-333)||(2187314-2187374)
chr3 (363-417)||(47173633-47173687)
chr3 (272-333)||(5505824-5505885)
chr3 (376-441)||(32982921-32982986)
chr3 (389-470)||(52931125-52931206)
chr3 (373-445)||(5506704-5506776)
chr3 (363-452)||(35100254-35100335)
chr3 (126-201)||(42380551-42380626)
chr3 (126-201)||(42409265-42409340)
chr3 (363-433)||(24350282-24350352)
chr3 (372-445)||(20450532-20450605)
chr3 (372-445)||(27446501-27446574)
chr3 (363-452)||(30814248-30814337)
chr3 (366-445)||(22257721-22257800)
chr3 (365-452)||(25146380-25146467)
chr3 (361-431)||(9338785-9338855)
chr3 (384-484)||(37973197-37973296)
chr3 (299-403)||(39469913-39470018)
chr3 (278-326)||(39719301-39719349)
chr3 (400-484)||(41538407-41538497)
chr3 (299-333)||(52788676-52788710)
chr3 (299-333)||(54542053-54542087)
chr3 (344-445)||(612098-612199)
chr3 (300-333)||(30814368-30814401)
chr3 (136-201)||(33896663-33896728)
chr3 (300-333)||(40480139-40480172)
chr3 (300-333)||(44545231-44545264)
chr3 (400-452)||(4835762-4835814)
chr3 (300-332)||(28677009-28677041)
chr3 (126-194)||(42380729-42380797)
chr3 (126-194)||(42409443-42409511)
chr3 (363-403)||(43740325-43740365)
chr3 (371-403)||(44545303-44545335)
[»] scaffold0418 (1 HSPs)
scaffold0418 (369-470)||(4562-4663)
[»] scaffold0197 (2 HSPs)
scaffold0197 (363-470)||(30152-30259)
scaffold0197 (382-445)||(28076-28139)
[»] scaffold0009 (2 HSPs)
scaffold0009 (296-445)||(192009-192159)
scaffold0009 (125-202)||(143350-143427)
[»] scaffold0246 (1 HSPs)
scaffold0246 (361-445)||(7119-7203)
[»] scaffold0087 (1 HSPs)
scaffold0087 (363-470)||(52996-53103)
[»] scaffold1632 (1 HSPs)
scaffold1632 (363-445)||(37-119)
[»] scaffold0116 (1 HSPs)
scaffold0116 (300-445)||(22595-22741)
[»] scaffold0031 (1 HSPs)
scaffold0031 (300-445)||(126760-126906)
[»] scaffold0011 (1 HSPs)
scaffold0011 (363-445)||(63908-63990)
[»] scaffold0002 (3 HSPs)
scaffold0002 (363-445)||(431322-431404)
scaffold0002 (361-445)||(119239-119323)
scaffold0002 (123-201)||(92001-92078)
[»] scaffold0362 (1 HSPs)
scaffold0362 (361-470)||(5471-5579)
[»] scaffold0122 (2 HSPs)
scaffold0122 (363-445)||(12717-12799)
scaffold0122 (300-332)||(12831-12863)
[»] scaffold0075 (2 HSPs)
scaffold0075 (363-417)||(27162-27216)
scaffold0075 (300-333)||(27248-27281)
[»] scaffold0027 (2 HSPs)
scaffold0027 (388-445)||(41765-41822)
scaffold0027 (300-333)||(41858-41891)
[»] scaffold0076 (1 HSPs)
scaffold0076 (369-437)||(10833-10901)
[»] scaffold0263 (1 HSPs)
scaffold0263 (123-201)||(13373-13450)
[»] scaffold1360 (2 HSPs)
scaffold1360 (432-499)||(1184-1251)
scaffold1360 (278-332)||(1346-1400)
[»] scaffold0598 (1 HSPs)
scaffold0598 (345-410)||(8997-9062)
[»] scaffold0043 (1 HSPs)
scaffold0043 (365-452)||(59171-59258)
[»] scaffold0347 (1 HSPs)
scaffold0347 (400-470)||(11823-11893)
[»] scaffold0166 (1 HSPs)
scaffold0166 (300-333)||(36355-36388)
[»] scaffold0064 (1 HSPs)
scaffold0064 (125-201)||(22372-22448)
[»] scaffold0001 (1 HSPs)
scaffold0001 (168-200)||(504633-504665)


Alignment Details
Target: chr2 (Bit Score: 383; Significance: 0; HSPs: 99)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 17 - 551
Target Start/End: Original strand, 41877446 - 41877989
Alignment:
Q  17 agcaaaaagggtttaatctccgtgttaaatattcaaacggagtttaatctcaagtccatttaagcattaataagatttatgatttaaatacnnnnnnnnc 116  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||        |    
T  41877446 agcaaaaagtgtttaatctccgtgttaaatatccaaacggagtttaatctcaagtccatttaagcattaataagatttctaatttaaatacttttttttc 41877545  T
Q  117 tttgaaatatactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagtaagtttttagacaaaa 216  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  41877546 tttgaaatatactccctttgtccctatatctaagcacacttttattagaagaaaagagtgcttacata--gggacggagggagtaagtttttagacaaaa 41877643  T
Q  217 taacatgtcacatcaagtttgtttacgcaccactaactgtcttttaactcgatctagggtatgtttggtaagtccactaaatgagcttatagcttatagc 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41877644 taacatgtcacatcaagtttgtttacgcaccactaactgtcttttaactcgatctagggtatgtttggtaagtccactaaatgagcttatagcttatagc 41877743  T
Q  317 ttataagctcgtttgac-nnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttat----------ttcacgagcttataaactatttt 405  Q
    ||||||| |||||||||        ||| ||||||||||||||||||||||||||||||||   |||          |||||||||||||||||||||||    
T  41877744 ttataagttcgtttgacaaaaaaaactctgtttggtaatggtctcttaccacgagcttataaactatttttcagaagttcacgagcttataaactatttt 41877843  T
Q  406 tcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacccttgctattttctctaataaccaattctacccctatag 505  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||    
T  41877844 tcagaagctatttcaagtagtgtttgagcttatagcttatcattttttcttcaatctttacccttgctattttctctaaaaaccaattctacccctatag 41877943  T
Q  506 ttttaaataaaatatctatgttttgattaatgctcacaaatgatcg 551  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  41877944 ttttaaataaaatatctatgatttgattaatgctcacaaatgatcg 41877989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 345 - 548
Target Start/End: Complemental strand, 6222736 - 6222537
Alignment:
Q  345 gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    ||||| |||| ||||||||||||||   ||||||||||||||||||||||||| |||||||||||||| ||||||||| ||  ||||| |||||||||||    
T  6222736 gtttgataatagtctcttaccacgaaactatagcttatttcacgagcttataagctatttttcagaagctatttcaagcagcatttgaacttatagctta 6222637  T
Q  445 tcattttttctttcatctttacccttgctattttctctaataaccaattctacccctatagttttaaataaaatatctatgttttgattaatgctcacaa 544  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||   | |||||||||||    
T  6222636 tcatttttgctttcatctttacccttgctattttctctaaaaaccaattcta-ccctatagttttaaataaaatatctatgttt---taaatgctcacaa 6222541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 272 - 443
Target Start/End: Complemental strand, 23357156 - 23356983
Alignment:
Q  272 agggtatgtttggtaagtccactaaatgagcttatagcttatag-cttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacga 369  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||        ||  ||||||||||| |||||||||||||    
T  23357156 agggtctgtttggtaagcccattaaatgagcttatagcttataggcttataagctcgtttgacaaaaaaagctatgtttggtaatgctctcttaccacga 23357057  T
Q  370 gcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctt 443  Q
    |||||||||||||||||||||||||||  |||||||||||||| |||||||||||| || ||||||||||||||    
T  23357056 gcttatagcttatttcacgagcttatatgctatttttcagaagctatttcaagtagcgtctgagcttatagctt 23356983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 272 - 499
Target Start/End: Original strand, 24019845 - 24020084
Alignment:
Q  272 agggtatgtttggtaagtccactaaatgagcttatagcttata-----------gcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtct 359  Q
    ||||| ||||||||||| |||||||||||||||||||||||||           |||||||||||||||||||        ||  ||||||||||| |||    
T  24019845 agggtctgtttggtaagcccactaaatgagcttatagcttataacttatatatagcttataagctcgtttgacaaaaaaagctttgtttggtaatgatct 24019944  T
Q  360 cttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttca 459  Q
    || ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||||| |||| || ||    
T  24019945 ctaaccacgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttatcatcttttattcca 24020044  T
Q  460 tctttacccttgctattttctctaataaccaattctaccc 499  Q
    | | |||| ||  |||||| ||||| |||||||| |||||    
T  24020045 tttataccattattattttatctaaaaaccaattttaccc 24020084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 13761748 - 13761853
Alignment:
Q  271 tagggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgag 370  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||||||||    
T  13761748 tagggtctgtttggtaagcccactaaatgagcttatagcttatagcttataagctcgtttgacaaaaaagctctgtttggtaatggtctcttaccacgag 13761847  T
Q  371 cttata 376  Q
    ||||||    
T  13761848 cttata 13761853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 41796821 - 41796714
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||||||||| | |||| |    
T  41796821 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcattttttgtctcattt 41796722  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  41796721 ttaccctt 41796714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 4453666 - 4453520
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  4453666 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 4453567  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||    
T  4453566 ctatttttcagaagctattccaagtagtgtttgagcttatagcttat 4453520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 344 - 445
Target Start/End: Original strand, 25071413 - 25071514
Alignment:
Q  344 cgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctt 443  Q
    |||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||  |||| ||||||| |||||||||||||||||    
T  25071413 cgtttgataatggtctcttacctcgagcttatagtttatttcacgagcttataagctatttttcagaaactattccaagtagcgtttgagcttatagctt 25071512  T
Q  444 at 445  Q
    ||    
T  25071513 at 25071514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 29514831 - 29514977
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    |||||| |||||| |||||||||||||||||||||       ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  29514831 gagcttttagcttttagcttataagctcgtttgacaaaaaagctctgtttggtaacactttttcaccaagagcttatagcttatttcacgagcttataag 29514930  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  29514931 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 29514977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 6760683 - 6760576
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||||||||| | |||| |    
T  6760683 accatgagcttatagcttatttcacaagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcattttttgtctcattt 6760584  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  6760583 ttaccctt 6760576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 278 - 445
Target Start/End: Complemental strand, 10393200 - 10393032
Alignment:
Q  278 tgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttata 376  Q
    ||||||||||| |  |||||| ||||||||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| |||||||||    
T  10393200 tgtttggtaagacacctaaattagcttatagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttata 10393101  T
Q  377 gcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||| |||||||||| |||||||||||||| |||| ||||||| ||||||| |||||||||||    
T  10393100 gcttatttcatgagcttataagctatttttcagaagctattccaagtagcgtttgagtttatagcttat 10393032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 21865244 - 21865391
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn--ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    ||||| ||||||||||||||||||||||||||||         ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||    
T  21865244 agcttttagcttatagcttataagctcgtttgacaaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 21865343  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  21865344 gctatttttcagaagttattccaagtagcgtttgagcttatagcttat 21865391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 40869438 - 40869331
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| ||||||||||||||||||| |||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||||||||| | |||| |    
T  40869438 accatgagcttatagcttatttcatgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcattttttgtctcattt 40869339  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  40869338 ttaccctt 40869331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 5039842 - 5039944
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacc 467  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  ||||||    
T  5039842 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacc 5039941  T
Q  468 ctt 470  Q
    |||    
T  5039942 ctt 5039944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 43135684 - 43135786
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacc 467  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| ||||||||| |  ||||||    
T  43135684 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttctttgaattttacc 43135783  T
Q  468 ctt 470  Q
    |||    
T  43135784 ctt 43135786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 43507706 - 43507559
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||    
T  43507706 gagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttatttcacgagcttataa 43507607  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  43507606 gctatttttcagaagctattccaagtagcgtttgagcttatagcttat 43507559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 44275724 - 44275806
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  44275724 accacgagcttatagcttatttcacgagcttataatctatttttcagaagttattccaattagcgtttgagcttatagcttat 44275806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 3377390 - 3377536
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  3377390 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 3377489  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  3377490 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 3377536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 9886990 - 9887136
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  9886990 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 9887089  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||| ||| |||||||||||| |||||||||||||||||||    
T  9887090 ctatttttcataagctatttcaagtagcgtttgagcttatagcttat 9887136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 15521477 - 15521623
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  15521477 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaaaactttttcaccatgagcttatagcttatttcacgagcttataag 15521576  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  15521577 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 15521623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 16486880 - 16487026
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  16486880 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 16486979  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  16486980 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 16487026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 28382823 - 28382677
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  28382823 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 28382724  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  28382723 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 28382677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 36712679 - 36712533
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  36712679 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 36712580  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  36712579 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 36712533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 38579151 - 38579005
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  38579151 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 38579052  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  38579051 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 38579005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 445
Target Start/End: Complemental strand, 650917 - 650777
Alignment:
Q  306 tagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactattt 404  Q
    ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| |||||||||||||||||||||||||||||| ||||||    
T  650917 tagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 650818  T
Q  405 ttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||| |||| ||||||| |||||||||||||||||||    
T  650817 ttcagaagctattccaagtagcgtttgagcttatagcttat 650777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 4038419 - 4038312
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |    
T  4038419 accatgagcttatagcttatttcacgagcttataagttatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaatt 4038320  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  4038319 ttaccctt 4038312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 4385604 - 4385497
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||||  |||||||||||| ||||||||||||||||| ||| |||||||| ||  |    
T  4385604 accatgagtttatagcttatttcacgagcttataagctatttttcagaaactatttcaagtagcgtttgagcttatagcttctcactttttcttccaatt 4385505  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  4385504 ttaccctt 4385497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 31616465 - 31616358
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||| ||| ||||||||||||||||| ||| |||||||| ||  |    
T  31616465 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttctcactttttcttccaatt 31616366  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  31616365 ttaccctt 31616358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 37356166 - 37356313
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn--ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    ||||| ||||||||||||||||||||||||||||         ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||    
T  37356166 agcttttagcttatagcttataagctcgtttgaccaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 37356265  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  37356266 gctatttttcagaagctattccaagtagcgtttgagcttatagcttat 37356313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 2266231 - 2266149
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  2266231 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2266149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 2546403 - 2546321
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  2546403 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2546321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 6232359 - 6232277
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  6232359 accatgagcttatagtttatttcacgagcttataagctatttttcagaagatatttcaagtagcgtttgagcttatagcttat 6232277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 7400470 - 7400388
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  7400470 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 7400388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 8689041 - 8688959
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  8689041 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 8688959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 8815275 - 8815357
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  8815275 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 8815357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 13111821 - 13111739
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  13111821 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 13111739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 17263832 - 17263750
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  17263832 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 17263750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 24402131 - 24402049
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  24402131 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 24402049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 38842897 - 38842979
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||    
T  38842897 accatgagtttatagcttatttcacgagcttataaactatttttcagaagctatttcaagtagcgtttgaacttatagcttat 38842979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 39167813 - 39167895
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  39167813 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 39167895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 41322818 - 41322900
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  41322818 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 41322900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 389 - 470
Target Start/End: Complemental strand, 6153515 - 6153434
Alignment:
Q  389 agcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||  |||||||||    
T  6153515 agcttataagctatttttcagaagttattccaagtagtgtttgagcttatagcttctcattttttctttcaattttaccctt 6153434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 366 - 467
Target Start/End: Original strand, 16669117 - 16669218
Alignment:
Q  366 acgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatcttta 465  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| | |||| ||||||| |||||||||||||||||||||| |||| || ||| ||||    
T  16669117 acgagcttatagcttatttcaggagcttataagctatttttcagacgctattccaagtagcgtttgagcttatagcttatcatcttttattccattttta 16669216  T
Q  466 cc 467  Q
    ||    
T  16669217 cc 16669218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 309 - 445
Target Start/End: Original strand, 26911519 - 26911655
Alignment:
Q  309 cttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttca 408  Q
    |||||||||||||||||||||||||       |||  ||||||||   | | | |||| |||||||||||||||||||||||||||||| ||||||||||    
T  26911519 cttatagcttataagctcgtttgacaaaaaaactctctttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatttttca 26911618  T
Q  409 gaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||| ||||||| ||||||||||||| |||||    
T  26911619 gaagctattccaagtagcgtttgagcttataacttat 26911655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 36999551 - 36999633
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||| |||||    
T  36999551 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttataacttat 36999633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 38880861 - 38880779
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  38880861 accatgagcttatagcttatttcacgagtttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 38880779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 40025021 - 40024939
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||  ||||||||||||||||||    
T  40025021 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcctttgagcttatagcttat 40024939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 345 - 445
Target Start/End: Original strand, 15250149 - 15250249
Alignment:
Q  345 gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    ||||| ||||||||| | ||||||||||||||||||||||| |||||||||||  ||||||||||| | |||| ||||||| |||||||||||||| |||    
T  15250149 gtttgataatggtctttcaccacgagcttatagcttatttctcgagcttataagttatttttcagacgctattccaagtagcgtttgagcttatagttta 15250248  T
Q  445 t 445  Q
    |    
T  15250249 t 15250249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 368 - 452
Target Start/End: Original strand, 42132734 - 42132818
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||| ||| ||| ||||||||||||||||| ||| ||||    
T  42132734 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttctcactttt 42132818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 374 - 444
Target Start/End: Complemental strand, 9053198 - 9053128
Alignment:
Q  374 atagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    |||| ||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||    
T  9053198 atagtttatttcacgagcttataaactattcttcagaagctatttcaagtagcgtttgagcttatagctta 9053128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 363 - 456
Target Start/End: Original strand, 34884872 - 34884965
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctt 456  Q
    |||||||| |||||| ||||||||||||||||||  ||||||||||||   |||| |||||||||||| |||||||||||| ||||||||||||    
T  34884872 accacgagtttatagtttatttcacgagcttatagcctatttttcagactctattccaagtagtgtttcagcttatagcttctcattttttctt 34884965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 363 - 456
Target Start/End: Original strand, 43285680 - 43285773
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctt 456  Q
    |||| ||||||||||||||||||| ||| |||||| |||||||||||||| |||| ||| ||| ||||||||||||||||| ||| ||||||||    
T  43285680 accatgagcttatagcttatttcatgagtttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttctcactttttctt 43285773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 363 - 439
Target Start/End: Complemental strand, 7213740 - 7213664
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttata 439  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||| |||||||    
T  7213740 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgtgcttata 7213664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 7823628 - 7823544
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||| ||||||||||||||||||||||| |||||||| | ||| || ||||||||| |||||||||||||||||||    
T  7823628 ttacaacgagcttgtagcttatttcacgagcttataagctattttttataagctacttcaagtagcgtttgagcttatagcttat 7823544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 8070699 - 8070617
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||||| ||||  |||||| |||||||||||||| ||||    
T  8070699 accatgagcttataacttatttcacgagcttataagctatttttcagaagctattctaagtagcgtttgagcttatagtttat 8070617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 10839659 - 10839577
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||| |||||||||| ||||||||| |||||||||| ||| |||| ||||||| |||||||||||||||||||    
T  10839659 accatgagcttatatcttatttcactagcttataagctatttttcaaaagctattccaagtagcgtttgagcttatagcttat 10839577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 2047391 - 2047318
Alignment:
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||||  |||||| |||||||||||||||||||    
T  2047391 ttatagcttatttcatgagtttataagctatttttcagaagttattctaagtagcgtttgagcttatagcttat 2047318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 361 - 470
Target Start/End: Original strand, 2758891 - 2759000
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcat 460  Q
    |||| ||||||||||| ||||||||| |||||||||| |||||||| ||| | |||| ||||||| |||||||||||||  ||||||| |||| || |||    
T  2758891 ttacaacgagcttataacttatttcatgagcttataagctattttttagacgctattccaagtagcgtttgagcttataatttatcatcttttattccat 2758990  T
Q  461 ctttaccctt 470  Q
     |||||||||    
T  2758991 ttttaccctt 2759000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 296 - 441
Target Start/End: Complemental strand, 5520215 - 5520069
Alignment:
Q  296 aatgagcttatagcttatagcttataagctcgtttg-acnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagctta 394  Q
    |||||||||||||||||||||||||||||||||||| |        ||| |||| |||| | | | |||| ||||||||||||||||||| | ||| |||    
T  5520215 aatgagcttatagcttatagcttataagctcgtttgtaaaaaaaaactctgtttagtaacgattttttacaacgagcttatagcttattttatgagttta 5520116  T
Q  395 taaactatttttcagaagttatttcaagtagtgtttgagcttatagc 441  Q
    ||| |||||||||||| | |||| ||| ||| |||||||||||||||    
T  5520115 taagctatttttcagatgctattacaaatagcgtttgagcttatagc 5520069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 400 - 484
Target Start/End: Original strand, 6807492 - 6807576
Alignment:
Q  400 tatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacccttgctattttctctaa 484  Q
    ||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| ||  |||||||||  |||||| |||||    
T  6807492 tatttttcagacgctatttcaagtagcgtttgagcttatagcttatcattttttcttccaattttacccttattattttatctaa 6807576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 4055952 - 4056034
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||   |||| ||| ||| |||||| ||||||||||||    
T  4055952 accacgagcttatagcttatttcacgagcttattagctatttttcagacactattccaaatagcgtttgaacttatagcttat 4056034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 33810616 - 33810690
Alignment:
Q  125 atactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggag 199  Q
    |||||||||| |||||||||| ||| ||| ||||||||||| |||||  ||||||||||||||||||||||||||    
T  33810616 atactcccttcgtccctatatgtaagcacccttttattagaggaaaattgtgcttacatatagggacggagggag 33810690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 397 - 470
Target Start/End: Complemental strand, 13351649 - 13351576
Alignment:
Q  397 aactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||||||| | |||||||||||| ||||||||||||||||| | |||||||||||||  |||||||||    
T  13351649 aactatttttcagacgctatttcaagtagcgtttgagcttatagcttcttattttttctttcaattttaccctt 13351576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 399 - 499
Target Start/End: Original strand, 13761856 - 13761954
Alignment:
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacccttgctattttctctaataaccaattctacc 498  Q
    |||||||||||||||||   ||||||| |||||||||||||||||||||| ||||||| ||| | |||||||  |||||| ||||| |||||||| ||||    
T  13761856 ctatttttcagaagttac--caagtagcgtttgagcttatagcttatcatcttttcttccatttatacccttattattttatctaaaaaccaattttacc 13761953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 598951 - 599035
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||| |||||| ||||||||  ||||||||| |||||||||||||| || ||||||||| |||||||||||||| ||||    
T  598951 ttacaacgagtttatagtttatttcaaaagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagtttat 599035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 369 - 445
Target Start/End: Original strand, 10727898 - 10727974
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||| ||||||| |||||||||| ||  |||| ||||||| ||||||||||||| |||||    
T  10727898 agcttatagcttatttcacgaacttataagctatttttcaaaaactattccaagtagcgtttgagcttataacttat 10727974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 13527983 - 13527901
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||| ||||| |||||||||| || |||||| |||||||||||||| |||||||||||  |||||| ||||||||||||    
T  13527983 accatgagtttataacttatttcacaagtttataagctatttttcagaagctatttcaagtaacgtttgaacttatagcttat 13527901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 18710257 - 18710339
Alignment:
Q  388 gagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||| |||||||| ||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |||||||||    
T  18710257 gagcttataagctattttttagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttaccctt 18710339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 12457017 - 12457093
Alignment:
Q  125 atactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    |||||||||  |||||||||||||| ||| ||||||||||| | |||  |||||||||||||||||| |||||||||    
T  12457017 atactccctccgtccctatatctaagcacccttttattagaggcaaagggtgcttacatatagggacagagggagta 12457093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 364 - 456
Target Start/End: Original strand, 37674482 - 37674574
Alignment:
Q  364 ccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctt 456  Q
    ||||||| |||||  ||||||||||||||| |||||||| ||| ||| | |||| ||||||| ||||||| ||||||||| ||| ||||||||    
T  37674482 ccacgagtttataatttatttcacgagcttgtaaactatattttagacgctattccaagtagcgtttgagtttatagcttctcactttttctt 37674574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 388 - 443
Target Start/End: Original strand, 7569853 - 7569908
Alignment:
Q  388 gagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctt 443  Q
    |||||||||| |||||||||||||||||||| |||||  |||||||||||||||||    
T  7569853 gagcttataagctatttttcagaagttattttaagtaacgtttgagcttatagctt 7569908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 3337166 - 3337236
Alignment:
Q  400 tatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    ||||||||||| |||||||||| || | ||||||||||||||||||||| |||| |||||| || ||||||    
T  3337166 tatttttcagacgttatttcaaataatatttgagcttatagcttatcatcttttatttcattttcaccctt 3337236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 8340046 - 8340123
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||| |||||| ||||  |||||| |||||||||| ||| |||| ||||||| ||||||||||| |||||||    
T  8340046 gagcttatagtttattttacgaatttataagctatttttcaaaagctattccaagtagcgtttgagcttaaagcttat 8340123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 376 - 453
Target Start/End: Original strand, 10361481 - 10361557
Alignment:
Q  376 agcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcatttttt 453  Q
    ||||| |||||||||||||||| || ||||| ||||| ||||||||||||| ||| ||||||||||| || |||||||    
T  10361481 agcttttttcacgagcttataa-ctttttttaagaagctatttcaagtagttttttagcttatagctgataatttttt 10361557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 9154210 - 9154142
Alignment:
Q  126 tactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacgga 194  Q
    ||||||||  |||||||||||||| ||| ||||||||||| |||||  ||| |||||||||||||||||    
T  9154210 tactccctccgtccctatatctaagcacccttttattagaggaaaagggtggttacatatagggacgga 9154142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 201
Target Start/End: Complemental strand, 43939497 - 43939437
Alignment:
Q  141 tatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    ||||||||| ||| ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  43939497 tatatctaagcacccttttattagaggcaaatagtgcttacatatagggacggaggaagta 43939437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 36887396 - 36887321
Alignment:
Q  126 tactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    ||||||||  |||||||||| |||||||  |||||||| | ||||||| ||||||||||||  |||||||||||||    
T  36887396 tactccctccgtccctatatgtaaacaccattttattataggaaaaaaatgcttacatatatagacggagggagta 36887321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 2221451 - 2221533
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||| |||||| ||||||||||||||| ||| |||||||||||| | |||| ||||||  |||||| |||||| |||||    
T  2221451 accatgagtttatagtttatttcacgagcttctaagctatttttcagacgctattccaagtaacgtttgaacttataacttat 2221533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 368 - 453
Target Start/End: Complemental strand, 2689143 - 2689059
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcatttttt 453  Q
    |||||||||||||||||||  |||| |||   |||||| || ||| |||||||||||| |||||| |||||| |||||||||||||    
T  2689143 gagcttatagcttatttcagaagct-atagtttattttccaaaagctatttcaagtagcgtttgaacttataacttatcatttttt 2689059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 12890263 - 12890340
Alignment:
Q  124 tatactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    ||||||||||  |||||||||||||| ||  ||||||||||| |||||  |||||||||| |||||| |||| |||||    
T  12890263 tatactccctccgtccctatatctaagcatccttttattagaggaaaatggtgcttacatttagggatggagagagta 12890340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 363 - 404
Target Start/End: Original strand, 18212182 - 18212223
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactattt 404  Q
    |||| |||||||||||||||||||||||||||||| ||||||    
T  18212182 accatgagcttatagcttatttcacgagcttataagctattt 18212223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 332
Target Start/End: Original strand, 22375954 - 22375987
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttga 332  Q
    ||||||||||||||||||||||||||||||||||    
T  22375954 gagcttatagcttatagcttataagctcgtttga 22375987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 202
Target Start/End: Complemental strand, 19246560 - 19246480
Alignment:
Q  123 atatactccctttgtccctatatctaaacacac-ttttattagaagaaaaaagtgcttacatatagggacggagggagtaa 202  Q
    |||||||||||  |||| ||||||||| ||||| |||||||||| |||||   ||||||||||||| ||| ||||||||||    
T  19246560 atatactccctccgtccttatatctaagcacaccttttattagaggaaaatgatgcttacatatagagacagagggagtaa 19246480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 21924895 - 21924835
Alignment:
Q  142 atatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagtaa 202  Q
    |||| ||| ||| ||||||||||| | |||| ||||||| |||||||||||||||||||||    
T  21924895 atatttaagcacccttttattagaggtaaaaggtgcttatatatagggacggagggagtaa 21924835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 38985126 - 38985202
Alignment:
Q  126 tactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagtaa 202  Q
    ||||||||  |||||||||| ||| ||| ||||||||||| | |||  ||||||| ||||||||||||| |||||||    
T  38985126 tactccctccgtccctatatataagcactcttttattagagggaaatggtgcttatatatagggacggaaggagtaa 38985202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 14949244 - 14949307
Alignment:
Q  136 gtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggag 199  Q
    ||||||| |||||| ||| ||||||||||| | |||  |||||||||||||| |||||||||||    
T  14949244 gtccctacatctaagcactcttttattagaggcaaatggtgcttacatatagagacggagggag 14949307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 434 - 484
Target Start/End: Original strand, 2757312 - 2757362
Alignment:
Q  434 cttatagcttatcattttttctttcatctttacccttgctattttctctaa 484  Q
    |||||| |||||||||||||||||||| |||||||||  |||||| |||||    
T  2757312 cttataacttatcattttttctttcatttttacccttattattttatctaa 2757362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 368 - 478
Target Start/End: Complemental strand, 33850198 - 33850088
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacc 467  Q
    ||||||||||| |||||||| || |||||   |||| | || | | |||||||||||| ||||||| |||||||||||  ||||||||| ||  |||| |    
T  33850198 gagcttatagcgtatttcactagtttatagcttattctccatacgctatttcaagtagcgtttgagtttatagcttattgttttttcttccacttttaac 33850099  T
Q  468 cttgctatttt 478  Q
    ||| |||||||    
T  33850098 cttactatttt 33850088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 371 - 445
Target Start/End: Original strand, 39675089 - 39675163
Alignment:
Q  371 cttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| ||||||||| ||| ||||||  ||||||||| ||| |  ||||||||| ||||||||||||| |||||    
T  39675089 cttataacttatttcaagagtttataagatatttttcaaaagctgcttcaagtagcgtttgagcttataacttat 39675163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 2546467 - 2546434
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  2546467 agcttttagcttatagcttataagctcgtttgac 2546434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 5039773 - 5039806
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  5039773 agcttttagcttatagcttataagctcgtttgac 5039806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 13111886 - 13111853
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  13111886 agcttttagcttatagcttataagctcgtttgac 13111853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 141 - 201
Target Start/End: Original strand, 2485299 - 2485359
Alignment:
Q  141 tatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    ||||||||||||| ||| ||||||||  |||  |||| ||||||||||||| |||||||||    
T  2485299 tatatctaaacacccttatattagaaacaaatggtgcctacatatagggaccgagggagta 2485359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 361 - 397
Target Start/End: Original strand, 2757275 - 2757311
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  2757275 ttaccacgagtttatagcttatttcatgagcttataa 2757311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 402 - 442
Target Start/End: Original strand, 14452413 - 14452453
Alignment:
Q  402 tttttcagaagttatttcaagtagtgtttgagcttatagct 442  Q
    ||||| ||||||||||||||||||  |||||||||||||||    
T  14452413 ttttttagaagttatttcaagtagcttttgagcttatagct 14452453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #96
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 174 - 202
Target Start/End: Original strand, 17663844 - 17663872
Alignment:
Q  174 gtgcttacatatagggacggagggagtaa 202  Q
    |||||||||||||||||||||||||||||    
T  17663844 gtgcttacatatagggacggagggagtaa 17663872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #97
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 174 - 202
Target Start/End: Original strand, 20362202 - 20362230
Alignment:
Q  174 gtgcttacatatagggacggagggagtaa 202  Q
    |||||||||||||||||||||||||||||    
T  20362202 gtgcttacatatagggacggagggagtaa 20362230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #98
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 301 - 333
Target Start/End: Complemental strand, 31616528 - 31616496
Alignment:
Q  301 gcttatagcttatagcttataagctcgtttgac 333  Q
    |||| ||||||||||||||||||||||||||||    
T  31616528 gcttttagcttatagcttataagctcgtttgac 31616496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #99
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 293 - 333
Target Start/End: Complemental strand, 40869509 - 40869469
Alignment:
Q  293 ctaaatgagcttatagcttatagcttataagctcgtttgac 333  Q
    |||||| |||||||||||||||| |||||||||| ||||||    
T  40869509 ctaaattagcttatagcttatagtttataagctcatttgac 40869469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 271 - 529
Target Start/End: Original strand, 9201 - 9460
Alignment:
Q  271 tagggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacga 369  Q
    |||||| | ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||        ||| ||||| |||||||||||||||||||    
T  9201 tagggtctttttggtaagcccactaaatgagcttatagcttataccttataagctcgtttgacaaaaaaaactctgtttgttaatggtctcttaccacga 9300  T
Q  370 gcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccct 469  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9301 gctcatagcttatttcacgagcttataaactatttttcagaagctatttcaagtagtgtttgagcttatagcttatcattttttcttccatctttaccct 9400  T
Q  470 tgctattttctctaataaccaattctacccctatagttttaaataaaatatctatgtttt 529  Q
    ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9401 tgcaattttctctaaaaaccaattctacccctatagttttaaataaaatatctatgtttt 9460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 165; Significance: 7e-88; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 272 - 548
Target Start/End: Original strand, 84227 - 84502
Alignment:
Q  272 agggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn--ctccgtttggtaatggtctcttaccacga 369  Q
    ||||| |||| ||||||||||  |||||||||||||||||||||| |||||| |||||||||         ||| ||||||||||||||||||| |||||    
T  84227 agggtctgttgggtaagtccataaaatgagcttatagcttatagcatataagttcgtttgacaaaaaaaaactctgtttggtaatggtctcttatcacga 84326  T
Q  370 gcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccct 469  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||| ||||| ||||||    
T  84327 gcttatagcttatttcacgagcttataaactatttttcagaagctatttcaagtagcgtttgagcttataacttatcattttttcttccatctctaccct 84426  T
Q  470 tgctattttctctaataaccaattctacccctatagttttaaataaaatatctatgttttgattaatgctcacaaatga 548  Q
    ||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||   | |||||||||||||||    
T  84427 tgctattttctctaaaatccaattctacccctatatttttaaataaaatatctatgttt---taaatgctcacaaatga 84502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 93468 - 93386
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| ||| |||| ||||||| |||||||||||||||||||    
T  93468 accatgagcttatagcttatttcacgagcttataagctatttttcataagctattccaagtagcgtttgagcttatagcttat 93386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 164; Significance: 3e-87; HSPs: 124)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 345 - 548
Target Start/End: Complemental strand, 20148903 - 20148700
Alignment:
Q  345 gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| ||||    
T  20148903 gtttggtaatggtctcttgccatgagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttataactta 20148804  T
Q  445 tcattttttctttcatctttacccttgctattttctctaataaccaattctacccctatagttttaaataaaatatctatgttttgattaatgctcacaa 544  Q
    |||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20148803 tcattttttcttccatctttacccttgctattttctctaaaacccaattctacccctatagttttaaataaaatatctatgttttaattaatgctcacaa 20148704  T
Q  545 atga 548  Q
    ||||    
T  20148703 atga 20148700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 303 - 493
Target Start/End: Original strand, 36196874 - 36197065
Alignment:
Q  303 ttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaacta 401  Q
    ||||||||||||| |||||||||||||||||        ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36196874 ttatagcttatagtttataagctcgtttgacaaaaatagctctgtttgataattgtctcttaccacgagcttatagcttatttcacgagcttataaacta 36196973  T
Q  402 tttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacccttgctattttctctaataaccaatt 493  Q
    ||||||||||| ||||  ||||||||||||||||||||||||||||| ||||||| ||| | |||||||  |||||| ||||| ||||||||    
T  36196974 tttttcagaagctattctaagtagtgtttgagcttatagcttatcatcttttcttccatttatacccttattattttatctaaaaaccaatt 36197065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 430 - 548
Target Start/End: Complemental strand, 30623391 - 30623276
Alignment:
Q  430 tgagcttatagcttatcattttttctttcatctttacccttgctattttctctaataaccaattctacccctatagttttaaataaaatatctatgtttt 529  Q
    |||||||||| |||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||     
T  30623391 tgagcttataacttatcattttttcttccatctttaccattgctattttatctaaaaaccaattctacccctatagttttaaataaaatatctatgttt- 30623293  T
Q  530 gattaatgctcacaaatga 548  Q
      | |||||||||||||||    
T  30623292 --taaatgctcacaaatga 30623276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 363 - 529
Target Start/End: Complemental strand, 42085805 - 42085638
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    ||||||| ||||||||||||||||||||||||||| || ||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||  |    
T  42085805 accacgaacttatagcttatttcacgagcttataagctttttttcagacgctatttcaagtagcgtttgagcttatagcttatcattttttctttcaatt 42085706  T
Q  463 ttacccttgctattttctctaataaccaattctaccc-ctatagttttaaataaaatatctatgtttt 529  Q
    ||||||||  |||||  ||||| |  || || |||||  |||| ||| ||||||||||||||||||||    
T  42085705 ttacccttaatatttattctaaaattcagttttaccctttataatttcaaataaaatatctatgtttt 42085638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 21633963 - 21633817
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnnctcc-gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    |||||||||||||||||||||||| |||||||||        |   ||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  21633963 agcttatagcttatagcttataagttcgtttgacaaaaaaagttttgtttggtaatgttctcttaccacgagcttatagcttatttcacgagcttataag 21633864  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||| ||| |||||||||||||||||||    
T  21633863 ctatttttcagaagctattccaaatagcgtttgagcttatagcttat 21633817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 346 - 470
Target Start/End: Complemental strand, 32101835 - 32101711
Alignment:
Q  346 tttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| | ||| |||||| ||||||| |||||||||||||||||||    
T  32101835 tttggtaacggtcttttaccacgagcttataacttatttcacgagcttataaactatttctaagacgttattccaagtagcgtttgagcttatagcttat 32101736  T
Q  446 cattttttctttcatctttaccctt 470  Q
     || ||||||| ||  |||||||||    
T  32101735 tatcttttcttccaattttaccctt 32101711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 35581028 - 35580921
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||| ||||||||| | |||| |    
T  35581028 accatgagcttatagtttatttcacgagcttataaactatttttcagaggctatttcaagtagcgtttgagcttatagcttctcattttttgtctcattt 35580929  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  35580928 ttaccctt 35580921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 363 - 470
Target Start/End: Original strand, 55829065 - 55829172
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||| ||||||||| | |||| |    
T  55829065 accatgagcttataacttatttcacgagcttataaactatttttcagaagctattccaagtagcgtttgagcttatagcttctcattttttgtctcattt 55829164  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  55829165 ttaccctt 55829172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 300 - 470
Target Start/End: Complemental strand, 55496027 - 55495856
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  55496027 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 55495928  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |||||||||    
T  55495927 ctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttaccctt 55495856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 300 - 477
Target Start/End: Complemental strand, 35777533 - 35777355
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  35777533 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 35777434  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacccttgctattt 477  Q
    |||||||||||||| |||| ||||||| ||||||||||||| ||| ||| |||||||| ||  |||||||||| |||||    
T  35777433 ctatttttcagaagctattccaagtagcgtttgagcttataccttctcactttttcttccaattttacccttgttattt 35777355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 369 - 470
Target Start/End: Complemental strand, 40497473 - 40497372
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccc 468  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||| | |||| |||||||    
T  40497473 agcttataacttatttcacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttctcattttttgtctcatttttaccc 40497374  T
Q  469 tt 470  Q
    ||    
T  40497373 tt 40497372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 42116893 - 42117039
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  42116893 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 42116992  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||    
T  42116993 ctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 42117039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 46895280 - 46895426
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| ||||||||||  | | | |||| ||||||||||||||||||||||||||||||     
T  46895280 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataag 46895379  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  46895380 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 46895426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 361 - 493
Target Start/End: Original strand, 20511468 - 20511600
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcat 460  Q
    |||| ||||||||||||||||||||| |||||||||| |||||||||||| | |||| ||||||| ||||||||||||| |||||||| ||||||| |||    
T  20511468 ttacaacgagcttatagcttatttcatgagcttataagctatttttcagacgctattccaagtagcgtttgagcttataacttatcatcttttcttccat 20511567  T
Q  461 ctttacccttgctattttctctaataaccaatt 493  Q
     | |||||||  |||||| ||||| ||||||||    
T  20511568 ttatacccttattattttatctaaaaaccaatt 20511600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 37115366 - 37115259
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |    
T  37115366 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaatt 37115267  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  37115266 ttaccctt 37115259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 4391856 - 4391709
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||||||||| ||||||||||||||||| ||||        ||| ||||||||| | | | |||| ||||||||||||||||||||| ||||||||||    
T  4391856 gagcttatagctgatagcttataagctcgtctgacaaaaaaagctctgtttggtaacgcttttttacaacgagcttatagcttatttcaggagcttataa 4391757  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     |||||||||||||| || ||||||||| |||||||||||||||||||    
T  4391756 gctatttttcagaagctacttcaagtagcgtttgagcttatagcttat 4391709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 4465549 - 4465447
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacc 467  Q
    ||||||||||||||||||||||||||||||||||||||||||| | | || ||||||| |||||||||| ||||||||||| ||||||| || |||||||    
T  4465549 gagcttatagcttatttcacgagcttataaactatttttcagacgctgttccaagtagcgtttgagcttgtagcttatcatcttttcttccacctttacc 4465450  T
Q  468 ctt 470  Q
    |||    
T  4465449 ctt 4465447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 9032078 - 9031996
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  9032078 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagtgtttgagcttatagcttat 9031996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 11152087 - 11151940
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||    
T  11152087 gagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 11151988  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  11151987 gctatttttcagaagctattccaagtagcgtttgagcttatagcttat 11151940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 271 - 445
Target Start/End: Complemental strand, 35190791 - 35190617
Alignment:
Q  271 tagggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacga 369  Q
    |||||| |||||||||| ||| | ||| |||||||||||||||||||||||||||||| ||||        ||| ||||||||| | | | |||| ||||    
T  35190791 tagggtctgtttggtaactcc-caaaaagagcttatagcttatagcttataagctcgtctgacaaaaaaaactctgtttggtaacgcttttttacaacga 35190693  T
Q  370 gcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    | || |||||||||||| |||||||||| |||||||||||||| || ||||||||| |||||||||||||||||||    
T  35190692 gtttgtagcttatttcaggagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttat 35190617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 39087705 - 39087559
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||| ||||||     
T  39087705 agcttctagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagtttataag 39087606  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  39087605 ctatttttcagaagttattccaagtagcgtttgagcttatagcttat 39087559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 53407186 - 53407332
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  53407186 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 53407285  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  53407286 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 53407332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 4939471 - 4939387
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  4939471 ttaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 4939387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 5465495 - 5465411
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  5465495 ttaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 5465411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 306 - 470
Target Start/End: Original strand, 31678972 - 31679137
Alignment:
Q  306 tagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactattt 404  Q
    ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| |||||||||||||||||||||||||||||| ||||||    
T  31678972 tagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 31679071  T
Q  405 ttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||| ||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |||||||||    
T  31679072 ttcaaaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttaccctt 31679137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 445
Target Start/End: Complemental strand, 8829956 - 8829816
Alignment:
Q  306 tagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactattt 404  Q
    ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| |||||||||||||||||||||||||||||| ||||||    
T  8829956 tagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 8829857  T
Q  405 ttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||| |||| ||||||| |||||||||||||||||||    
T  8829856 ttcagaagctattccaagtagcgtttgagcttatagcttat 8829816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 345 - 484
Target Start/End: Original strand, 11050360 - 11050499
Alignment:
Q  345 gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    ||||||||||| | | | |||| || ||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||     
T  11050360 gtttggtaatgctttttcaccatgaacttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttc 11050459  T
Q  445 tcattttttctttcatctttacccttgctattttctctaa 484  Q
    |||   || ||| ||| |||||||||  |||||| |||||    
T  11050460 tcaaaattccttccatttttacccttaatattttatctaa 11050499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 346 - 445
Target Start/End: Original strand, 22430679 - 22430778
Alignment:
Q  346 tttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||| | | ||||||||||||||||||||||||||||||||||| |||||||||||| | |||| ||||||| |||||||||||||||||||    
T  22430679 tttgataatggtttttcaccacgagcttatagcttatttcacgagcttataagctatttttcagatgctattccaagtagcgtttgagcttatagcttat 22430778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 362 - 445
Target Start/End: Complemental strand, 27185716 - 27185633
Alignment:
Q  362 taccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  27185716 taccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 27185633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 43225760 - 43225653
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||| ||| ||||||||||||||||| ||| |||||||| ||  |    
T  43225760 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttctcactttttcttccaatt 43225661  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  43225660 ttaccctt 43225653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 445
Target Start/End: Original strand, 45906142 - 45906282
Alignment:
Q  306 tagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactattt 404  Q
    ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| |||||||||||||||||||||||||||||| ||||||    
T  45906142 tagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 45906241  T
Q  405 ttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||| |||| ||||||| |||||||||||||||||||    
T  45906242 ttcagaagctattccaagtagcgtttgagcttatagcttat 45906282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 3009707 - 3009854
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||| ||||||||||||||||| ||||||||||        ||| |||||||||   | | |||||  ||||||||||||||||||||||||||||||    
T  3009707 gagcttttagcttatagcttataaactcgtttgacaaaaaaagctctgtttggtaacatttttttaccttgagcttatagcttatttcacgagcttataa 3009806  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  3009807 gctatttttcagaagctattccaagtagcgtttgagcttatagcttat 3009854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 4355675 - 4355593
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| |||||    
T  4355675 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttataacttat 4355593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 4517274 - 4517192
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  4517274 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 4517192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 12234050 - 12233968
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  12234050 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 12233968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 21369941 - 21370023
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  21369941 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 21370023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 22892589 - 22892671
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  22892589 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 22892671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 22944253 - 22944335
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  22944253 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 22944335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 25440567 - 25440485
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  25440567 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 25440485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 28307316 - 28307398
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  28307316 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 28307398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 31338583 - 31338501
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  31338583 accatgagcttatagcttatttcacgggcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 31338501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 52670055 - 52670137
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  52670055 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 52670137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 55684691 - 55684838
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||||||||| ||||||||||||||||| ||||        ||  ||||||||||| | | |||| |||||||| |||||||||||| ||||||||||    
T  55684691 gagcttatagctgatagcttataagctcgtctgacaaaaaaagctttgtttggtaatgcttttttacaacgagcttctagcttatttcaggagcttataa 55684790  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     |||||||||||||| || ||||||||| |||||||||||||||||||    
T  55684791 gctatttttcagaagctacttcaagtagcgtttgagcttatagcttat 55684838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 55764620 - 55764702
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  55764620 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 55764702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 56270174 - 56270092
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||| ||||||||    
T  56270174 accatgagcttatagcttatttcacgagcttataaactatttttcagaagctattccaagtagcgtttgagcttttagcttat 56270092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 7706369 - 7706515
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||| ||||||||||||||||||||||||||     
T  7706369 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagtttatagcttatttcacgagcttataag 7706468  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  7706469 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 7706515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 18582841 - 18582987
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||| ||||||||||||||||||||     
T  18582841 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttataacttatttcacgagcttataag 18582940  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  18582941 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 18582987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 27397913 - 27397767
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  27397913 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 27397814  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||| ||| |||| ||||||| |||||||||||||||||||    
T  27397813 ctatttttcataagctattccaagtagcgtttgagcttatagcttat 27397767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 365 - 470
Target Start/End: Complemental strand, 33005189 - 33005084
Alignment:
Q  365 cacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatcttt 464  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||  ||||||||||||||||| ||| |||||||| ||  |||    
T  33005189 cacgagcttatagcttatttcacgagtttataagctatttttcagaagctattccaagtaacgtttgagcttatagcttctcactttttcttccaatttt 33005090  T
Q  465 accctt 470  Q
    ||||||    
T  33005089 accctt 33005084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 33115041 - 33115118
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||  |||||||||||||||||||    
T  33115041 gagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtatcgtttgagcttatagcttat 33115118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 361 - 470
Target Start/End: Original strand, 37047088 - 37047197
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcat 460  Q
    |||| ||||||||||||||||||| | |||||||||| |||||||||||||| || ||||| ||| |||||||||||||||||||||| ||||||| |||    
T  37047088 ttacaacgagcttatagcttattttaggagcttataagctatttttcagaagctacttcaaatagcgtttgagcttatagcttatcatattttcttccat 37047187  T
Q  461 ctttaccctt 470  Q
     |||| ||||    
T  37047188 ttttatcctt 37047197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 364 - 445
Target Start/End: Complemental strand, 43078278 - 43078197
Alignment:
Q  364 ccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||  ||||||||||||||||||    
T  43078278 ccacgagcttataacttatttcacgagcttataaactatttttcagacgctatttcaagtagcatttgagcttatagcttat 43078197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 56372432 - 56372578
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  56372432 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 56372531  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| |||| || |||||||||||||||||||    
T  56372532 ctatttttcagaagctattccaagcagcgtttgagcttatagcttat 56372578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 25235204 - 25235288
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||||| |||||||||||||||||||    
T  25235204 ttacaacgagcttatagcttatttcaggagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttat 25235288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 306 - 470
Target Start/End: Original strand, 37831925 - 37832089
Alignment:
Q  306 tagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactattt 404  Q
    ||||||||||||||||||||||||||||        ||| |||||||||   | | |||||| ||| |||||||||||||||||||||||||| ||||||    
T  37831925 tagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacacttttttaccatgagtttatagcttatttcacgagcttataagctattt 37832024  T
Q  405 ttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||| |||| ||||||| ||||||| |||||| || ||| |||||||| || ||||||||||    
T  37832025 ttcagaagctattccaagtagcgtttgaggttatagtttctcactttttcttcca-ctttaccctt 37832089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 55856612 - 55856528
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||||| |||| ||||||| |||||||||||||||||||    
T  55856612 ttaccatgagcttatagcttatttcacgagcttataagctattttttagaagctattccaagtagcgtttgagcttatagcttat 55856528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 299 - 454
Target Start/End: Original strand, 29663925 - 29664081
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| |||||||||||||||||||| |||||||||    
T  29663925 gagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacaagcttataa 29664024  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttc 454  Q
     |||||||||||||| |||| || |||| ||||||||||||||||| ||| ||||||    
T  29664025 gctatttttcagaagctattccaggtagcgtttgagcttatagcttctcactttttc 29664081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 8941965 - 8942047
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||| |||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  8941965 accatgagcttatagcttattttacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 8942047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 11600744 - 11600826
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  11600744 accatgagcttatagcttatttcacaagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 11600826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 19513965 - 19513883
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||| ||||||||||||||    
T  19513965 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgttttagcttatagcttat 19513883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 23867952 - 23867870
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||| ||||| |||| ||||||| |||||||||||||||||||    
T  23867952 accatgagcttatagcttatttcacgagcttataagctattttttagaagctattccaagtagcgtttgagcttatagcttat 23867870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 371 - 445
Target Start/End: Original strand, 29413600 - 29413674
Alignment:
Q  371 cttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  29413600 cttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 29413674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 37970355 - 37970437
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||| |||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  37970355 accatgagcttatagcttatttcatgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 37970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 307 - 445
Target Start/End: Complemental strand, 52708138 - 52708000
Alignment:
Q  307 agcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttt 405  Q
    ||||||||||||||||||||||||||         ||| ||||||||| | | | |||| ||||||||||||||||||||||||||||||||||||||||    
T  52708138 agcttatagcttataagctcgtttgatagaaaaaactctgtttggtaacgattttttacaacgagcttatagcttatttcacgagcttataaactatttt 52708039  T
Q  406 tcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||| |||||| ||||||  | |||||||||||||||||    
T  52708038 tcagatgttattacaagtaacg-ttgagcttatagcttat 52708000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 55358421 - 55358339
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  55358421 accatgagcttataacttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 55358339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 368 - 445
Target Start/End: Complemental strand, 23113554 - 23113477
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||| ||||| |||||    
T  23113554 gagcttatagcttatttcacgagcttataagctatttttcagaagttattccaagtagcgtttgagtttataacttat 23113477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 26826587 - 26826664
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  26826587 gagcttataacttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 26826664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 368 - 445
Target Start/End: Complemental strand, 30366224 - 30366147
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||  |||||| |||||||||||||||||||    
T  30366224 gagcttatatcttatttcacgagcttataaactatttttcagaagctattctaagtagcgtttgagcttatagcttat 30366147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 372 - 452
Target Start/End: Original strand, 44525707 - 44525787
Alignment:
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||||||| ||||||||||||||||| ||| ||||    
T  44525707 ttatagcttatttcacgagcttataagctatttttcagaaactatttcaagtagcgtttgagcttatagcttctcactttt 44525787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 346 - 438
Target Start/End: Original strand, 50502284 - 50502376
Alignment:
Q  346 tttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttat 438  Q
    |||||||| ||| | |||| ||||| |||||||||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||||    
T  50502284 tttggtaacggttttttacaacgagtttatagcttatttcacgagcttataagctatttttcagacgctattccaagtagtgtttgagcttat 50502376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 369 - 445
Target Start/End: Complemental strand, 51011142 - 51011066
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  51011142 agcttatagcttatttcacaagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 51011066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 9043693 - 9043611
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||||| |||| ||| ||| |||||||||||||||||||    
T  9043693 accatgagcttataacttatttcacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttat 9043611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 44442143 - 44442224
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||| |||||| ||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  44442143 accatgagcttattgcttatctcacgagctta-aaactatttttcagaagctatttcaagtagcgtttgagcttatagcttat 44442224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 300 - 470
Target Start/End: Complemental strand, 47417622 - 47417451
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  47417622 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 47417523  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||| ||||| ||| |||| |||| || ||||||||||||| ||| ||| |||||||| ||  |||||||||    
T  47417522 ctatctttcataagctattccaagcagcgtttgagcttataacttctcactttttcttccaattttaccctt 47417451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 371 - 484
Target Start/End: Complemental strand, 8716993 - 8716880
Alignment:
Q  371 cttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    ||||||||||||||||  ||||||||   |||||| |||| | ||||||||||||||||||||||||||| ||||||||||||||| ||| | |||||||    
T  8716993 cttatagcttatttcaaaagcttatagtttattttccagaggctatttcaagtagtgtttgagcttatagtttatcattttttcttccatttctaccctt 8716894  T
Q  471 gctattttctctaa 484  Q
      |||||| |||||    
T  8716893 attattttatctaa 8716880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 15636012 - 15636085
Alignment:
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||  |||||||||||    
T  15636012 ttatagcttatttcacgagcttataaactatttttcagaagctattccaagtagcgtttgattttatagcttat 15636085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 22038504 - 22038358
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| |||||||||||||||||| ||||||||||      
T  22038504 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttctcgagcttatagg 22038405  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||  |||||||||||||||||||    
T  22038404 ctatttttcagaagctattccaagtaacgtttgagcttatagcttat 22038358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 371 - 456
Target Start/End: Original strand, 31953224 - 31953309
Alignment:
Q  371 cttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctt 456  Q
    |||||||||||||||||||  ||||||||||||||| |||  ||||||||||||| ||||||||||||||||| ||| ||||||||    
T  31953224 cttatagcttatttcacgactttataaactattttttagacattatttcaagtagcgtttgagcttatagcttctcactttttctt 31953309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 363 - 439
Target Start/End: Original strand, 35468076 - 35468152
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttata 439  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||| ||| |||||||||||||    
T  35468076 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttata 35468152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 4392808 - 4392727
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||| ||| |||| ||||||| |||||||||||||||||||    
T  4392808 accatgagcttatagcttatttcacgagcttataagcta-ttttcataagctattccaagtagcgtttgagcttatagcttat 4392727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 23162667 - 23162745
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttg-agcttatagcttat 445  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||  |||| ||||||||||||||    
T  23162667 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcttttgaagcttatagcttat 23162745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 35822382 - 35822300
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||| | ||||||||||||| |||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  35822382 accatgagcttacaacttatttcacgagattataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 35822300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 388 - 470
Target Start/End: Complemental strand, 45780815 - 45780733
Alignment:
Q  388 gagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||||||  |||||||||    
T  45780815 gagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttctttcaattttaccctt 45780733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 361 - 467
Target Start/End: Complemental strand, 48056691 - 48056585
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcat 460  Q
    |||| |||| ||||||| ||||||||||| |||||||  ||||||||||| | |||| ||||||| |||||||||||||||||||||| |||| || |||    
T  48056691 ttacaacgaacttatagtttatttcacgaacttataagttatttttcagacgctattccaagtagcgtttgagcttatagcttatcatcttttattccat 48056592  T
Q  461 ctttacc 467  Q
     ||||||    
T  48056591 ttttacc 48056585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 361 - 467
Target Start/End: Original strand, 31435065 - 31435171
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcat 460  Q
    |||| ||||||||||||||||||||||||| ||||||  ||||||||| | | |||| ||||||| ||||||| ||||| |||||||| |||| || |||    
T  31435065 ttacaacgagcttatagcttatttcacgagtttataagttatttttcatacgctattccaagtagcgtttgaggttataacttatcatcttttattccat 31435164  T
Q  461 ctttacc 467  Q
     ||||||    
T  31435165 ttttacc 31435171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 365 - 459
Target Start/End: Complemental strand, 38048958 - 38048864
Alignment:
Q  365 cacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttca 459  Q
    ||||| ||||||  |||||||||||| ||||||||||||||||||| | |||| ||| |||  |||||| |||||||||||||||| ||||||||    
T  38048958 cacgaacttataatttatttcacgagtttataaactatttttcagacgctattccaaatagcatttgagtttatagcttatcatttcttctttca 38048864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 499
Target Start/End: Complemental strand, 41864153 - 41864027
Alignment:
Q  373 tatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacccttgc 472  Q
    |||||||||||| |||| ||||||| |||||||| ||||| |||| ||| ||| |||| || ||||||||| |||| ||||||| ||| |||||||||      
T  41864153 tatagcttattttacgaacttataagctatttttaagaagctattccaaatagcgtttaagtttatagcttctcatcttttcttccatttttacccttat 41864054  T
Q  473 tattttctctaataaccaattctaccc 499  Q
    |||||| ||||| | |||||| |||||    
T  41864053 tattttatctaaaatccaattttaccc 41864027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 32564905 - 32564829
Alignment:
Q  125 atactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    |||||||||  |||||||||| ||| ||| ||||||||||| | ||| |||||||||||||||||||||||||||||    
T  32564905 atactccctccgtccctatatgtaagcacccttttattagaggcaaagagtgcttacatatagggacggagggagta 32564829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 7209057 - 7209133
Alignment:
Q  125 atactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    |||||||||  |||||||||||||| |||  ||||||||||   ||| |||||||||||||||||||||||||||||    
T  7209057 atactccctcagtccctatatctaagcacttttttattagagacaaagagtgcttacatatagggacggagggagta 7209133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 24954282 - 24954222
Alignment:
Q  385 cacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||| |||||||||||| | |||| ||||||| |||||||||||||||||||    
T  24954282 cacgagcttataagctatttttcagacgctattccaagtagcgtttgagcttatagcttat 24954222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 42124740 - 42124680
Alignment:
Q  385 cacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||| ||||||| | |||| ||||||| |||||||||||||||||||    
T  42124740 cacgagcttataaactatctttcagacgctattccaagtagcgtttgagcttatagcttat 42124680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 385 - 456
Target Start/End: Original strand, 17715647 - 17715718
Alignment:
Q  385 cacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctt 456  Q
    ||||||||||||| |||||||||||| | |||| ||||||| ||||||| |||||||||||  |||||||||    
T  17715647 cacgagcttataagctatttttcagacgctattccaagtagcgtttgagattatagcttattgttttttctt 17715718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 455
Target Start/End: Original strand, 1031352 - 1031440
Alignment:
Q  366 acgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttct 455  Q
    ||||||||||||||||||| ||||| ||||||  |||||| |||| | |||||||  || |||||||||||| |||||||||| ||||||    
T  1031352 acgagcttatagcttattttacgagtttataacttatttt-cagacgctatttcagatattgtttgagcttacagcttatcatcttttct 1031440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 299 - 396
Target Start/End: Complemental strand, 33005276 - 33005178
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttata 396  Q
    |||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | |||||| |||||||||||||||||||||||||||||    
T  33005276 gagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttata 33005178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 36486459 - 36486386
Alignment:
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| |||||| | ||||||||||||||||||||| ||| ||||| |||||  |||||| ||||||||||||    
T  36486459 ttatagtttattttatgagcttataaactatttttcataagctattttaagtaacgtttgaacttatagcttat 36486386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 384 - 452
Target Start/End: Original strand, 53224309 - 53224377
Alignment:
Q  384 tcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    ||||||| |||||| |||||||||| ||| |||| ||||||| ||||||||||||||||| ||| ||||    
T  53224309 tcacgagtttataagctatttttcaaaagctattccaagtagcgtttgagcttatagcttctcactttt 53224377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 432 - 499
Target Start/End: Complemental strand, 3932256 - 3932189
Alignment:
Q  432 agcttatagcttatcattttttctttcatctttacccttgctattttctctaataaccaattctaccc 499  Q
    ||||||||||||||||| ||||||||||| |||||||||  |||||| ||||| | |||||| |||||    
T  3932256 agcttatagcttatcatattttctttcatttttacccttattattttatctaaaatccaattttaccc 3932189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 278 - 333
Target Start/End: Original strand, 17715559 - 17715614
Alignment:
Q  278 tgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgac 333  Q
    ||||||||||| ||||  | | ||||||||||||||||||||||||||||||||||    
T  17715559 tgtttggtaaggccacacagttagcttatagcttatagcttataagctcgtttgac 17715614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 371 - 422
Target Start/End: Original strand, 53273187 - 53273238
Alignment:
Q  371 cttatagcttatttcacgagcttataaactatttttcagaagttatttcaag 422  Q
    |||||| |||||||||||||||||||| |||||||||||||| |||| ||||    
T  53273187 cttataacttatttcacgagcttataagctatttttcagaagctattccaag 53273238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 3932405 - 3932351
Alignment:
Q  278 tgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttga 332  Q
    ||||||||||| |||  |||||||||||||||  |||||||||||||||||||||    
T  3932405 tgtttggtaagaccaaaaaatgagcttatagcgaatagcttataagctcgtttga 3932351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 201
Target Start/End: Complemental strand, 4473124 - 4473058
Alignment:
Q  135 tgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    ||||||||||| ||| |||  |||||||||| | ||| ||||||||||||||||||||||| |||||    
T  4473124 tgtccctatatgtaagcacctttttattagaggcaaagagtgcttacatatagggacggagagagta 4473058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 6902295 - 6902249
Alignment:
Q  268 atctagggtatgtttggtaagtccactaaatgagcttatagcttata 314  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||||    
T  6902295 atctagggtctgtttggcaagcccactaaatgagcttatagcttata 6902249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 368 - 454
Target Start/End: Original strand, 39068892 - 39068978
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttc 454  Q
    ||||||||| ||||||||| ||| ||||||  ||||||||||| | |||||||||||  |||||| |||||| |||||  |||||||    
T  39068892 gagcttataacttatttcaggagtttataacttatttttcagacgatatttcaagtaacgtttgatcttataacttattgttttttc 39068978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 385 - 478
Target Start/End: Original strand, 40119903 - 40120003
Alignment:
Q  385 cacgagcttataaactatttttcagaagttatttcaagtagtgtttgagct-------tatagcttatcattttttctttcatctttacccttgctattt 477  Q
    |||||||||||||||||||||||||| | |||| |||||||  ||||||||       ||||||||||||| ||||||| ||  ||||||||| ||||||    
T  40119903 cacgagcttataaactatttttcagacgctattccaagtagcatttgagcttgtagcctatagcttatcatattttcttccacttttacccttactattt 40120002  T
Q  478 t 478  Q
    |    
T  40120003 t 40120003  T

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Target: chr4; HSP #105
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 368 - 417
Target Start/End: Complemental strand, 29656771 - 29656722
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatt 417  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||| ||||    
T  29656771 gagcttatagcttatttcacgagctaataatttatttttcagaagctatt 29656722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 361 - 470
Target Start/End: Complemental strand, 30562933 - 30562825
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcat 460  Q
    |||| |||| |||||| ||||||| | ||||  |||| |||||||||||| | |||| ||||||| |||| ||||||||||||||||| |||| || |||    
T  30562933 ttacaacgaacttataacttattttatgagca-ataagctatttttcagatgctattacaagtagcgtttaagcttatagcttatcatgttttattccat 30562835  T
Q  461 ctttaccctt 470  Q
     | |||||||    
T  30562834 ttataccctt 30562825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 36008075 - 36008019
Alignment:
Q  389 agcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||| || ||||||||||| |||| ||||||| ||||||| |||||||||||    
T  36008075 agcttataagctgtttttcagaagctattccaagtagcgtttgagtttatagcttat 36008019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 445
Target Start/End: Original strand, 37337710 - 37337782
Alignment:
Q  373 tatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |  ||||||| |||||||||| ||| || ||||||||| |||||| ||||||| ||||    
T  37337710 tatagcttatttcaggtacttataagctatttttcataagctacttcaagtagcgtttgaacttatagtttat 37337782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 44525584 - 44525644
Alignment:
Q  273 gggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgac 333  Q
    |||| ||||||||||| ||| ||||||| ||||||| |||||| ||||||||| |||||||    
T  44525584 gggtctgtttggtaagcccattaaatgaacttatagtttatagtttataagcttgtttgac 44525644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 432 - 499
Target Start/End: Complemental strand, 21633823 - 21633756
Alignment:
Q  432 agcttatagcttatcattttttctttcatctttacccttgctattttctctaataaccaattctaccc 499  Q
    ||||||||||||||||| ||||||| ||| | |||||||  |||||| ||||| |||||||| |||||    
T  21633823 agcttatagcttatcatcttttcttccatttatacccttattattttatctaaaaaccaattttaccc 21633756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 332
Target Start/End: Complemental strand, 24954375 - 24954316
Alignment:
Q  273 gggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttga 332  Q
    |||| ||||||||||  |||  ||| |||||||||| |||||||||||||||||||||||    
T  24954375 gggtctgtttggtaaagccatcaaacgagcttatagtttatagcttataagctcgtttga 24954316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 386 - 444
Target Start/End: Original strand, 26443389 - 26443447
Alignment:
Q  386 acgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    ||||||||||||||||||||||| ||| || ||||||||  |||| |||||||| ||||    
T  26443389 acgagcttataaactatttttcaaaagctacttcaagtaacgtttaagcttataactta 26443447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 333
Target Start/End: Original strand, 29413527 - 29413561
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgac 333  Q
    |||||| ||||||||||||||||||||||||||||    
T  29413527 gagcttttagcttatagcttataagctcgtttgac 29413561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 333
Target Start/End: Complemental strand, 36008153 - 36008119
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgac 333  Q
    |||||| ||||||||||||||||||||||||||||    
T  36008153 gagcttttagcttatagcttataagctcgtttgac 36008119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #115
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 367 - 445
Target Start/End: Original strand, 52713559 - 52713637
Alignment:
Q  367 cgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||| |||||||||| | |||||||  ||||||| |||   ||||  |||||| |||||||||||||||||||    
T  52713559 cgagcttataacttatttcacaaacttataagttatttttaagacactattctaagtagcgtttgagcttatagcttat 52713637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #116
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 9043758 - 9043725
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  9043758 agcttttagcttatagcttataagctcgtttgac 9043725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #117
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 11600680 - 11600713
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  11600680 agcttttagcttatagcttataagctcgtttgac 11600713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #118
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 28307252 - 28307285
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  28307252 agcttttagcttatagcttataagctcgtttgac 28307285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #119
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 333
Target Start/End: Complemental strand, 42124834 - 42124773
Alignment:
Q  272 agggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||| ||||| |||  ||| |||||||||||  ||||||||||||||||||||||    
T  42124834 agggtctgtttcgtaagaccaaaaaaagagcttatagcgaatagcttataagctcgtttgac 42124773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #120
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 45780884 - 45780851
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  45780884 agcttttagcttatagcttataagctcgtttgac 45780851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #121
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 53273115 - 53273148
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  53273115 agcttttagcttatagcttataagctcgtttgac 53273148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #122
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 273 - 313
Target Start/End: Complemental strand, 30623416 - 30623376
Alignment:
Q  273 gggtatgtttggtaagtccactaaatgagcttatagcttat 313  Q
    |||| ||||||||||| |||||||||||||||||| |||||    
T  30623416 gggtctgtttggtaagcccactaaatgagcttataacttat 30623376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #123
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 31486479 - 31486447
Alignment:
Q  169 aaaaagtgcttacatatagggacggagggagta 201  Q
    |||||| ||||||||||||||||||||||||||    
T  31486479 aaaaagggcttacatatagggacggagggagta 31486447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #124
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 417 - 445
Target Start/End: Original strand, 38759604 - 38759632
Alignment:
Q  417 ttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||||||    
T  38759604 ttcaagtagtgtttgagcttatagcttat 38759632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 1e-73; HSPs: 78)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 307 - 520
Target Start/End: Original strand, 2855090 - 2855303
Alignment:
Q  307 agcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactattttt 406  Q
    |||||||| |||||||| |||||||||        || |||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2855090 agcttataacttataagttcgtttgacaaaaaagttctgtttggcaatgatctcttaccacgagcttatagcttatttcacgagcttataagctattttt 2855189  T
Q  407 cagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacccttgctattttctctaataaccaattctacccctatagt 506  Q
    || |||||||||||||||| ||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2855190 caaaagttatttcaagtagcgtttgagcttatagcttattattttttcctccatctttacccttgctattttctctaaaaaccaattctacccctatagt 2855289  T
Q  507 tttaaataaaatat 520  Q
    ||||||||||||||    
T  2855290 tttaaataaaatat 2855303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 295 - 470
Target Start/End: Complemental strand, 39747090 - 39746914
Alignment:
Q  295 aaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagctt 393  Q
    |||||||||||||||  ||||||||||||||||||||||        ||| ||||||||||| | | | |||||||||||||| ||||||||||||||||    
T  39747090 aaatgagcttatagcgaatagcttataagctcgtttgaccaaaaaagctctgtttggtaatgttttttcaccacgagcttataacttatttcacgagctt 39746991  T
Q  394 ataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||| |||||||||||| | |||| ||||||| ||||||||||||||||||| |||||||||| ||  |||||||||    
T  39746990 ataagctatttttcagatgctattccaagtagcgtttgagcttatagcttataattttttcttccaattttaccctt 39746914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 296 - 484
Target Start/End: Complemental strand, 3427771 - 3427582
Alignment:
Q  296 aatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagctta 394  Q
    |||||||||||||||||||| |||||||||||| ||||        ||| ||||||||||| | | | |||| || ||||||||||||||||||||||||    
T  3427771 aatgagcttatagcttataggttataagctcgtctgacaaaaaaagctctgtttggtaatgctttttcaccatgaccttatagcttatttcacgagctta 3427672  T
Q  395 taaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacccttgctattttctctaa 484  Q
    ||| |||||||| ||||| |||| ||||||| ||||||||||||||||| ||| | |||||| ||| |||||||||  |||||| |||||    
T  3427671 taagctattttttagaagctattccaagtagcgtttgagcttatagcttctcaatatttcttccatttttacccttaatattttatctaa 3427582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 307 - 470
Target Start/End: Original strand, 13969982 - 13970146
Alignment:
Q  307 agcttatagcttataagctcgtttga-cnnnnnnnctccgtttggtaatggtctctt-accacgagcttatagcttatttcacgagcttataaactattt 404  Q
    |||||||||||||||||||||||||| |       ||| |||||||| || ||| || ||||||||||||||||||||||||||||||||||| ||||||    
T  13969982 agcttatagcttataagctcgtttgatcaaaaaagctctgtttggtactg-tcttttcaccacgagcttatagcttatttcacgagcttataagctattt 13970080  T
Q  405 ttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||| | ||||  |||||| |||||||||||||||||||||| ||||||| ||| |||||||||    
T  13970081 ttcagacgctattcgaagtagcgtttgagcttatagcttatcatattttcttccatttttaccctt 13970146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 27781101 - 27781248
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||    
T  27781101 gagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 27781200  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  27781201 gctatttttcagaagttattccaagtagcgtttgagcttatagcttat 27781248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 341 - 445
Target Start/End: Complemental strand, 9370421 - 9370316
Alignment:
Q  341 ctccgtttggtaatggtctcttaccacgagcttatagctt-atttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttata 439  Q
    |||||||| |||||||||| ||| |||||||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  9370421 ctccgtttagtaatggtcttttatcacgagcttataactttatttcacgagcttataagctatttttcaaaagttatttcaagtagcgtttgagcttata 9370322  T
Q  440 gcttat 445  Q
    ||||||    
T  9370321 gcttat 9370316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 31478076 - 31478222
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  31478076 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 31478175  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  31478176 ctatttttcagaagttattccaagtagcgtttgagcttatagcttat 31478222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 32541223 - 32541369
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  32541223 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 32541322  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  32541323 ctatttttcagaagttattccaagtagcgtttgagcttatagcttat 32541369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 273 - 445
Target Start/End: Complemental strand, 29189899 - 29189726
Alignment:
Q  273 gggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagc 371  Q
    |||| |||||||||||  |||||||||||||||||||||||||||||||| |||||||||         ||| |||| |||| ||| | |||| ||||||    
T  29189899 gggtctgtttggtaagctcactaaatgagcttatagcttatagcttataaactcgtttgataagaaaagctctgtttagtaacggttttttactacgagc 29189800  T
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||   ||||||| ||||| |||| ||||||| ||||||||||| |||||||    
T  29189799 ttatagcttatttcacgagcttatatgttatttttaagaagctattccaagtagcgtttgagcttacagcttat 29189726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 363 - 470
Target Start/End: Original strand, 9211050 - 9211157
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||| ||||||||| | |||| |    
T  9211050 accatgagcttataacttatttcacgagcttataaactatttttcagaagctatcccaagtagcgtttgagcttatagcttctcattttttgtctcattt 9211149  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  9211150 ttaccctt 9211157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 31688132 - 31688025
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |    
T  31688132 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaatt 31688033  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  31688032 ttaccctt 31688025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 36112923 - 36112816
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |    
T  36112923 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaatt 36112824  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  36112823 ttaccctt 36112816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 7378847 - 7378994
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||||||| |||||||||||||| |||| ||||        ||| ||||||||| | | | |||| ||||||||||||||||||||| ||||||||||    
T  7378847 gagcttatagtttatagcttataagttcgtctgacaaaagaagctctgtttggtaacgcttttttacaacgagcttatagcttatttcatgagcttataa 7378946  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     |||||||||||||| || |||||||||||||||||||||||||||||    
T  7378947 gctatttttcagaagctacttcaagtagtgtttgagcttatagcttat 7378994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 300 - 470
Target Start/End: Complemental strand, 43276917 - 43276746
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    |||||||||||||||||||||||||||||||||         ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  43276917 agcttatagcttatagcttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 43276818  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||||||| |||| ||||||  ||||||||||||||||| ||| |||||||| ||  |||||||||    
T  43276817 ctatttttcagaagctattccaagtaacgtttgagcttatagcttctcactttttcttccaattttaccctt 43276746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 6338318 - 6338464
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| |||||||||||||||||||||||||||         ||| |||||||||   | | |||||| ||||||||||||||||||||||||||||||     
T  6338318 agcttctagcttatagcttataagctcgtttgataaaaaaaactctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataag 6338417  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  6338418 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 6338464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 16422898 - 16422975
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  16422898 gagcttatagcttatttcacgagcttataaactatttttcagaagctattccaagtagcgtttgagcttatagcttat 16422975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 31581694 - 31581840
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  31581694 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 31581793  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  31581794 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 31581840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 363 - 452
Target Start/End: Original strand, 32099601 - 32099690
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||    
T  32099601 accatgagcttatagcttatttcacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttctcactttt 32099690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 45141601 - 45141455
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  45141601 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 45141502  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  45141501 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 45141455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 273 - 445
Target Start/End: Original strand, 3511191 - 3511364
Alignment:
Q  273 gggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagc 371  Q
    |||| ||||||||||| |  || ||||| |||||||||||||||||||||| |||| ||||        ||| ||||||||||| | | |  ||| ||||    
T  3511191 gggtctgtttggtaagacacctcaatgaacttatagcttatagcttataagttcgtctgacgaaaaaaactcagtttggtaatgctttttagccatgagc 3511290  T
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    || ||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||| ||||||||||||    
T  3511291 ttgtagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgaacttatagcttat 3511364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 8270968 - 8271052
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  8270968 ttaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 8271052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 363 - 459
Target Start/End: Complemental strand, 37587800 - 37587704
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttca 459  Q
    |||| ||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||| |||||| ||| |||||||||||    
T  37587800 accatgagcttatagcttatttcacgagcttataagttatttttcagaagttattccaagtagcgtttgagcttttagcttctcactttttctttca 37587704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 39871265 - 39871410
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaac 399  Q
    ||||| ||||||||||||||||||||||||||||       |||  ||||||||   | | | |||| |||||||||||||||||||||||||||||| |    
T  39871265 agcttttagcttatagcttataagctcgtttgacaaaaaagctctatttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagc 39871364  T
Q  400 tatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||| |||| |||||||  ||||||||||||||||||    
T  39871365 tatttttcagaagctattccaagtagcatttgagcttatagcttat 39871410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 1893923 - 1893816
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||  |||||||||||||||| ||| |||||||| ||  |    
T  1893923 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcatttgagcttatagcttctcactttttcttccaatt 1893824  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  1893823 ttaccctt 1893816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 300 - 443
Target Start/End: Original strand, 17081654 - 17081798
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  17081654 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 17081753  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagctt 443  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||    
T  17081754 ctatttttcagaagctattccaagtagcgtttgagcttatagctt 17081798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 445
Target Start/End: Complemental strand, 36681587 - 36681447
Alignment:
Q  306 tagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactattt 404  Q
    ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| |||||||||||||||||||||||||||||| ||||||    
T  36681587 tagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 36681488  T
Q  405 ttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||| |||| ||||||| |||||||||||||||||||    
T  36681487 ttcagaagctattccaagtagcgtttgagcttatagcttat 36681447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 445
Target Start/End: Original strand, 39702312 - 39702452
Alignment:
Q  306 tagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactattt 404  Q
    ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| |||||||||||||||||||||||||||||| ||||||    
T  39702312 tagcttatagcttataagctcgtttgacataaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 39702411  T
Q  405 ttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||| |||| ||||||| |||||||||||||||||||    
T  39702412 ttcagaagctattccaagtagcgtttgagcttatagcttat 39702452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 470
Target Start/End: Original strand, 41313439 - 41313546
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||| ||| ||||||||||||||||| ||| |||||||| ||  |    
T  41313439 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttctcactttttcttccaatt 41313538  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  41313539 ttaccctt 41313546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 445
Target Start/End: Complemental strand, 44827457 - 44827317
Alignment:
Q  306 tagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactattt 404  Q
    ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| |||||||||||||||||||||||||||||| ||||||    
T  44827457 tagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 44827358  T
Q  405 ttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||| |||| ||||||| |||||||||||||||||||    
T  44827357 ttcagaagctattccaagtagcgtttgagcttatagcttat 44827317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 2642500 - 2642418
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  2642500 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2642418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 10618870 - 10618952
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  10618870 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 10618952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 28716728 - 28716810
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  28716728 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 28716810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 41693988 - 41693906
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  41693988 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 41693906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 42142817 - 42142735
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||| |||||||||||||||||||||||    
T  42142817 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaaatagtgtttgagcttatagcttat 42142735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 25023306 - 25023452
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  25023306 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 25023405  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||| ||||| |||| ||||||| |||||||||||||||||||    
T  25023406 ctattttttagaagctattccaagtagcgtttgagcttatagcttat 25023452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 11741187 - 11741103
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||  |||| ||||||| |||||||||||||||||||    
T  11741187 ttaccatgagcttatagcttatttcacgagcttataagctatttttcagaatctattccaagtagcgtttgagcttatagcttat 11741103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 28709371 - 28709451
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctt 443  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||    
T  28709371 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagctt 28709451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 17115602 - 17115684
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||| |||||    
T  17115602 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttataacttat 17115684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 23676936 - 23677018
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  23676936 accatgagcttatagcttatttcacgaacttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 23677018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 37560603 - 37560529
Alignment:
Q  371 cttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  37560603 cttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 37560529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 40223165 - 40223084
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  40223165 accatgagcttatagcttatttcacgagcttataa-ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 40223084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 44157261 - 44157343
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||| ||||| |||| ||||||| |||||||||||||||||||    
T  44157261 accatgagcttatagcttatttcacgagcttataagctatttttgagaagctattccaagtagcgtttgagcttatagcttat 44157343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 34395429 - 34395321
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaacta-tttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatc 461  Q
    |||| |||||||||||||||||||||||||||||| ||| ||||||||||| ||||  |||||| |||||| |||||||||| ||||||||| | ||||     
T  34395429 accatgagcttatagcttatttcacgagcttataagctattttttcagaagctattcaaagtagcgtttgaacttatagcttctcattttttgtctcatt 34395330  T
Q  462 tttaccctt 470  Q
    |||||||||    
T  34395329 tttaccctt 34395321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 272 - 376
Target Start/End: Original strand, 39677348 - 39677453
Alignment:
Q  272 agggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgac-nnnnnnnctccgtttggtaatggtctcttaccacgag 370  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||         || ||||||||||||||||||||||||||    
T  39677348 agggtctgtttggtaagcccactaaatgagcttatagcttatagcttataagcttgtttgacaaaaaaagttctgtttggtaatggtctcttaccacgag 39677447  T
Q  371 cttata 376  Q
    ||||||    
T  39677448 cttata 39677453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 24652331 - 24652413
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| | |||||| ||||| ||||||||||||  ||||||||||||||||||    
T  24652331 accatgagcttatagcttatttcacgagcttataagccattttttagaagctatttcaagtagcatttgagcttatagcttat 24652413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 35243434 - 35243352
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| ||||||||||||||||||||  ||||||||||| | |||| ||||||| |||||||||||||||||||    
T  35243434 accacgagcttatatcttatttcacgagcttataagttatttttcagacgctattccaagtagcgtttgagcttatagcttat 35243352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 38171509 - 38171427
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||||||||||  | ||||||||||| |||| ||||||| |||||||||||||||||||    
T  38171509 accatgagcttatagcttatttcacgagcttataagttgtttttcagaagctattccaagtagcgtttgagcttatagcttat 38171427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 38780725 - 38780807
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||| |||||| ||||||| ||||||||||||||||||||||||| | |||| ||||||| |||||||||||||||||||    
T  38780725 accacgaacttataacttattttacgagcttataaactatttttcagacgctattccaagtagcgtttgagcttatagcttat 38780807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 39320148 - 39320066
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||| ||||||||| |||||    
T  39320148 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgttcgagcttataacttat 39320066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 125 - 201
Target Start/End: Complemental strand, 15196576 - 15196500
Alignment:
Q  125 atactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    |||||||||  |||||||||||||| ||| ||||||||||||||||||  |||||||||||||||||||||||||||    
T  15196576 atactccctccgtccctatatctaagcacccttttattagaagaaaaagatgcttacatatagggacggagggagta 15196500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 36590199 - 36590282
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| ||||||||| |||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||| ||||||||    
T  36590199 ttaccatgagcttataacttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagctt-tagcttat 36590282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 43849291 - 43849207
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||| | |||||||||| |||||||||||| | |||| ||||||| |||||||||||||||||||    
T  43849291 ttacaacgagcttatagcttattttatgagcttataagctatttttcagatgctattacaagtagcgtttgagcttatagcttat 43849207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 22877999 - 22877925
Alignment:
Q  371 cttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||   ||||| |||||||||||||||||||    
T  22877999 cttatagcttatttcacgagcttataagctatttttcagaagctattctcagtagcgtttgagcttatagcttat 22877925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 361 - 458
Target Start/End: Complemental strand, 1363876 - 1363779
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttc 458  Q
    |||||| ||||||||| ||||||||||||| |||||| ||||| |||||| | ||||  |||||| |||||| ||||||||||| |||||||||||||    
T  1363876 ttaccatgagcttataacttatttcacgagtttataagctattattcagacgctattctaagtagcgtttgaacttatagcttaacattttttctttc 1363779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 369 - 445
Target Start/End: Complemental strand, 11298117 - 11298041
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||||||  ||||||||||||| |||| ||| ||  |||||||||||||||||||    
T  11298117 agcttatagcttatttcacgagcttataagatatttttcagaagctattccaaataacgtttgagcttatagcttat 11298041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 22957371 - 22957455
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| |||||||||||||||||||| |||||||||  ||||||||||||| ||||  |||||||||||||| |||||| ||||    
T  22957371 ttaccatgagcttatagcttatttcacaagcttataagttatttttcagaagctattctaagtagtgtttgagtttatagtttat 22957455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 380 - 445
Target Start/End: Original strand, 44263388 - 44263453
Alignment:
Q  380 tatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||| |||||||||| |||||||||||||| || ||||||||| |||||||||||||||||||    
T  44263388 tatttcaggagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttat 44263453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 385 - 445
Target Start/End: Original strand, 39677442 - 39677502
Alignment:
Q  385 cacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||| |||||||||| ||| |||| |||||||||||||||||||||||||||    
T  39677442 cacgagcttataagctatttttcaaaagctattccaagtagtgtttgagcttatagcttat 39677502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 124 - 202
Target Start/End: Complemental strand, 38125661 - 38125583
Alignment:
Q  124 tatactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagtaa 202  Q
    ||||||||||  |||||||||| ||| ||| ||||||||||| | |||| ||||||||||||| |||||||||||||||    
T  38125661 tatactccctccgtccctatatgtaagcacccttttattagaggcaaaaggtgcttacatatatggacggagggagtaa 38125583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 384 - 445
Target Start/End: Original strand, 13888326 - 13888387
Alignment:
Q  384 tcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||||||||| | |||| ||||||| |||| ||||||||||||||    
T  13888326 tcacgagcttataaactatttttcagacgctattccaagtagcgtttaagcttatagcttat 13888387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 385 - 470
Target Start/End: Complemental strand, 42203463 - 42203378
Alignment:
Q  385 cacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    ||||||||||||| |||||||||||||| ||||  |||||| ||||||||||||||||| |||  ||||||| ||  |||||||||    
T  42203463 cacgagcttataagctatttttcagaagctattctaagtagcgtttgagcttatagcttctcacattttcttccaattttaccctt 42203378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 385 - 440
Target Start/End: Original strand, 44318316 - 44318371
Alignment:
Q  385 cacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatag 440  Q
    ||||||||||||| |||||||||||| ||||||||||||||  |||||||||||||    
T  44318316 cacgagcttataagctatttttcagacgttatttcaagtagcatttgagcttatag 44318371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 2732390 - 2732320
Alignment:
Q  400 tatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    ||||||||||| |||||||||||| |||||||| |||||| |||||||| |||| || ||| |||||||||    
T  2732390 tatttttcagacgttatttcaagtggtgtttgaacttatatcttatcatcttttattccatttttaccctt 2732320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 40045469 - 40045546
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaact-atttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||| ||| || ||||||||| || |||||||||| | |||||||||||| |||||||||||||||||||    
T  40045469 gagcttatagctttttt-actagcttataagcttatttttcagacgctatttcaagtagcgtttgagcttatagcttat 40045546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 40551873 - 40551954
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||| ||||||||||||||| |||||||||  |||||||||||||| |||||||  ||| |||||||||||||| ||||    
T  40551873 accatgagtttatagcttatttcatgagcttatag-ctatttttcagaagctatttcagatagcgtttgagcttatagtttat 40551954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 361 - 441
Target Start/End: Complemental strand, 26037064 - 26036984
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagc 441  Q
    |||||||||| |||||| |||||||| ||| ||||||  ||||||||||| |||||| ||||| | ||||||| |||||||    
T  26037064 ttaccacgagtttatagtttatttcatgagtttataagttatttttcagatgttattccaagttgcgtttgagtttatagc 26036984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 24802620 - 24802565
Alignment:
Q  136 gtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggac 191  Q
    |||||||||||||| ||| ||||||||||| | |||| ||||||||||||||||||    
T  24802620 gtccctatatctaagcacccttttattagatgcaaaaggtgcttacatatagggac 24802565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 8436608 - 8436524
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||| |||||||||||||| | ||||||||||  ||||||||||| | |||| ||| ||  |||||| ||||||||||||    
T  8436608 ttacaacgaacttatagcttattttatgagcttataagttatttttcagatgctattacaaatatcgtttgaacttatagcttat 8436524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 413 - 453
Target Start/End: Original strand, 14171676 - 14171716
Alignment:
Q  413 ttatttcaagtagtgtttgagcttatagcttatcatttttt 453  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  14171676 ttattttaagtagcgtttgagcttatagcttatcatttttt 14171716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 333
Target Start/End: Complemental strand, 41694056 - 41694022
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgac 333  Q
    |||||| ||||||||||||||||||||||||||||    
T  41694056 gagcttttagcttatagcttataagctcgtttgac 41694022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 493
Target Start/End: Original strand, 39677496 - 39677557
Alignment:
Q  432 agcttatagcttatcattttttctttcatctttacccttgctattttctctaataaccaatt 493  Q
    ||||||||||||||||| ||||||| ||| | |||||||  |||||| ||||| ||||||||    
T  39677496 agcttatagcttatcatcttttcttccatttatacccttattattttatctaaaaaccaatt 39677557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 300 - 332
Target Start/End: Complemental strand, 1893988 - 1893956
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttga 332  Q
    ||||| |||||||||||||||||||||||||||    
T  1893988 agcttttagcttatagcttataagctcgtttga 1893956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 10651115 - 10651171
Alignment:
Q  389 agcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||| |||||||| |||||  |||| |||||| ||||||| |||||||||||    
T  10651115 agcttataagctattttttagaagcaattttaagtagcgtttgagtttatagcttat 10651171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 392 - 452
Target Start/End: Original strand, 16831619 - 16831679
Alignment:
Q  392 ttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||||| |||||||||| ||| ||||| |||||| ||||||||||||| ||| ||| ||||    
T  16831619 ttataagctatttttcataagctattttaagtagcgtttgagcttataacttctcactttt 16831679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 26293837 - 26293901
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgag 433  Q
    ||||||||||||||||||| |  |||||| ||||||||||||   |||| ||||||| |||||||    
T  26293837 agcttatagcttatttcacaaatttataagctatttttcagacactattccaagtagcgtttgag 26293901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 369 - 433
Target Start/End: Original strand, 26307094 - 26307158
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgag 433  Q
    ||||||||||||||||||| |  |||||| ||||||||||||   |||| ||||||| |||||||    
T  26307094 agcttatagcttatttcacaaatttataagctatttttcagacactattccaagtagcgtttgag 26307158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 402 - 442
Target Start/End: Complemental strand, 38364457 - 38364417
Alignment:
Q  402 tttttcagaagttatttcaagtagtgtttgagcttatagct 442  Q
    ||||| ||||||||||||||||||  |||||||||||||||    
T  38364457 tttttgagaagttatttcaagtagcttttgagcttatagct 38364417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 402 - 442
Target Start/End: Original strand, 43129704 - 43129744
Alignment:
Q  402 tttttcagaagttatttcaagtagtgtttgagcttatagct 442  Q
    ||||| ||||||||||||||||||  |||||||||||||||    
T  43129704 tttttgagaagttatttcaagtagcttttgagcttatagct 43129744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 131; Significance: 1e-67; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 345 - 527
Target Start/End: Complemental strand, 6104771 - 6104589
Alignment:
Q  345 gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    ||||||||||||||| | ||||||||||||||||||||||| ||||||||||| ||||||||||||   |||||||||||| ||||||||||||||||||    
T  6104771 gtttggtaatggtctttcaccacgagcttatagcttatttcgcgagcttataagctatttttcagatactatttcaagtagcgtttgagcttatagctta 6104672  T
Q  445 tcattttttctttcatctttacccttgctattttctctaataaccaattctacccctatagttttaaataaaatatctatgtt 527  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||| ||| ||||||||||||||||||    
T  6104671 tcattttttctttcatctttaccctttctattttctctaaaaaccaattctacccttataatttcaaataaaatatctatgtt 6104589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 307 - 470
Target Start/End: Original strand, 23648201 - 23648365
Alignment:
Q  307 agcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttt 405  Q
    ||||||||||||||||||| |||||||        ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23648201 agcttatagcttataagcttgtttgacaaaaaaagctctgtttggtaatgctctcttaccacgagcttatagcttatttcacgagcttataagctatttt 23648300  T
Q  406 tcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    ||||||| ||||||||||||  | |||||||||||||| | || |||| || ||| |||||||||    
T  23648301 tcagaagctatttcaagtagcttctgagcttatagctttttatcttttgttccatttttaccctt 23648365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 345 - 443
Target Start/End: Original strand, 20563440 - 20563538
Alignment:
Q  345 gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctt 443  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  | ||||||||||||||    
T  20563440 gtttgataatgctctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagctatttcaagtagcatctgagcttatagctt 20563538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 299 - 470
Target Start/End: Original strand, 10856132 - 10856304
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||    
T  10856132 gagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 10856231  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
     |||||||||||||| |||| ||||||| ||||||||||||||||| ||| ||||||||| |  |||||||||    
T  10856232 gctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttttaattttaccctt 10856304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 300 - 470
Target Start/End: Complemental strand, 31100161 - 31099990
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  31100161 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 31100062  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |||||||||    
T  31100061 ctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttaccctt 31099990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 28076419 - 28076569
Alignment:
Q  296 aatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagctta 394  Q
    ||||||||||||||||||||||||||| ||||| ||||        ||| ||||||||||  | | |||||| |||||||||||||||||||||||||||    
T  28076419 aatgagcttatagcttatagcttataaactcgtctgacaaaaaaagctctgtttggtaatacttttttaccatgagcttatagcttatttcacgagctta 28076518  T
Q  395 taaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||| |||||||| ||||| |||| ||||||| |||||||||||||||||||    
T  28076519 taagctatttttgagaagctattccaagtagcgtttgagcttatagcttat 28076569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 34233061 - 34232915
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  34233061 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 34232962  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||    
T  34232961 ctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 34232915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 5943056 - 5943138
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  5943056 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagtgtttgagcttatagcttat 5943138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 2442425 - 2442571
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  2442425 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 2442524  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  2442525 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2442571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 30811295 - 30811149
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| |||||||||||||||||| |||||||||        ||| ||||||||||  | | | |||| ||||||||||||||||||||||||||||||     
T  30811295 agcttttagcttatagcttataagttcgtttgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataag 30811196  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  30811195 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 30811149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 363 - 452
Target Start/End: Original strand, 33453800 - 33453889
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||||    
T  33453800 accatgagcttatagcttatttcacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttctcactttt 33453889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 299 - 444
Target Start/End: Original strand, 34439682 - 34439828
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||||||||||||||||||||||||||| ||||        ||| ||||||||||  | | | |||| ||||||||||||||||||||||||||||||    
T  34439682 gagcttatagcttatagcttataagctcgtctgacaaaaaaaactctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataa 34439781  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
     |||||||||||||| |||| ||||||  ||||||||||||||||||    
T  34439782 gctatttttcagaagctattccaagtaacgtttgagcttatagctta 34439828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 14227681 - 14227536
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaac 399  Q
    ||||| |||||||||||||||||||||||||||        ||  |||||||||   | | | |||| |||||||||||||||||||||||||||||| |    
T  14227681 agcttttagcttatagcttataagctcgtttgataaaaaagctttgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagc 14227582  T
Q  400 tatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||||    
T  14227581 tatttttcagaagctattccaagtagcgtttgagcttatagcttat 14227536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 15591235 - 15591151
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| |||||    
T  15591235 ttacaacgagcttatagcttatttcacgagcttataaactatttttcagaagctacttcaagtagcgtttgagcttataacttat 15591151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 558360 - 558507
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn--ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    ||||| ||||||||||||||||||||||||||||         ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||    
T  558360 agcttttagcttatagcttataagctcgtttgacaaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 558459  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  558460 gctatttttcagaagctattccaagtagcgtttgagcttatagcttat 558507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 445
Target Start/End: Original strand, 12297371 - 12297511
Alignment:
Q  306 tagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactattt 404  Q
    ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| |||||||||||||||||||||||||||||| ||||||    
T  12297371 tagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 12297470  T
Q  405 ttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||| |||| ||||||| |||||||||||||||||||    
T  12297471 ttcagaagctattccaagtagcgtttgagcttatagcttat 12297511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 20805054 - 20805136
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  20805054 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 20805136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 300 - 470
Target Start/End: Complemental strand, 31452100 - 31451930
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  31452100 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 31452001  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    || ||||||||||| |||| ||||||||||||||||||| ||||| ||| |||||||| ||  |||||||||    
T  31452000 ctgtttttcagaagctattccaagtagtgtttgagctta-agcttctcactttttcttccaattttaccctt 31451930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 32731823 - 32731905
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  32731823 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 32731905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 368 - 445
Target Start/End: Complemental strand, 34685093 - 34685016
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  34685093 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 34685016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 2970737 - 2970821
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| ||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  2970737 ttaccatgagtttatagcttatttcacgagcttataatctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2970821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 345 - 445
Target Start/End: Complemental strand, 5301702 - 5301602
Alignment:
Q  345 gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    ||||||||||| | | | |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||| |||||||||||||    
T  5301702 gtttggtaatgttttttcaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttaagcttatagctta 5301603  T
Q  445 t 445  Q
    |    
T  5301602 t 5301602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 369 - 445
Target Start/End: Complemental strand, 33540802 - 33540726
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  33540802 agcttatagcttatttcacgagcttataatctatttttcagaagctattccaagtagcgtttgagcttatagcttat 33540726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 5681584 - 5681666
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||| |||||    
T  5681584 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttataacttat 5681666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 6709778 - 6709696
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  6709778 accatgagcttatagcttatttcacgaaattataaactatttttcagaagctattccaagtagcgtttgagcttatagcttat 6709696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 7317693 - 7317611
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||| ||| |||||||||||||||||||    
T  7317693 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttat 7317611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 12140961 - 12140879
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| |||||| ||||||||||||    
T  12140961 accatgagcttatagtttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgaacttatagcttat 12140879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 12432703 - 12432621
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||  ||| ||||||| |||||||||||||||||||    
T  12432703 accatgagcttatagcttatttcacgagcttataagctatttttcagaagccattccaagtagcgtttgagcttatagcttat 12432621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 21894316 - 21894398
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||| | |||| ||||||| |||||||||||||||||||    
T  21894316 accacgagattatagcttatttcacgagcttataagctatttttcagacgctattccaagtagcgtttgagcttatagcttat 21894398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 31049398 - 31049480
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||| ||||| |||| ||| |||||||||||||||||||||||    
T  31049398 accatgagcttatagcttatttcacgagcttataagctatttttgagaagctattccaaatagtgtttgagcttatagcttat 31049480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 11015586 - 11015736
Alignment:
Q  296 aatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagctta 394  Q
    ||||||||||||||||||||||||||||||||| ||||        ||| ||||||||||  | | | |||| ||||||||| |||||||||||||||||    
T  11015586 aatgagcttatagcttatagcttataagctcgtctgacaaaaaaaactctgtttggtaatactttttcaccatgagcttataacttatttcacgagctta 11015685  T
Q  395 taaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     || |||||||| ||||| ||||  |||||| |||||||||||||||||||    
T  11015686 caagctatttttgagaagctattctaagtagcgtttgagcttatagcttat 11015736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 3108154 - 3108006
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagctta-tttcacgagcttata 396  Q
    |||||||||||||||||||||||||||||||||||        |||  ||||||||   | | | |||| ||||||||| |||| |||||||||||||||    
T  3108154 gagcttatagcttatagcttataagctcgtttgacaaaaaaagctctatttggtaacactttttcaccatgagcttataacttaatttcacgagcttata 3108055  T
Q  397 aactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    | |||||||||||||| |||||||| ||| |||||||||||||||||||    
T  3108054 agctatttttcagaagctatttcaaatagcgtttgagcttatagcttat 3108006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 9896770 - 9896852
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||||||| |||||||||||||| ||||||| | |||||||||    
T  9896770 accacgagcttatagtttatttcacaagcttataagctatttttcagacgttatttcaagtagcgtttgagttaatagcttat 9896852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 369 - 452
Target Start/End: Complemental strand, 3636717 - 3636634
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||  ||||| |||||||||| ||| ||||    
T  3636717 agcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcctttgaacttatagcttctcactttt 3636634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 300 - 417
Target Start/End: Complemental strand, 1806461 - 1806343
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||||||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  1806461 agcttatagcttatagcttataagctcgtttgactaaaaaatctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 1806362  T
Q  399 ctatttttcagaagttatt 417  Q
    |||||||||||||| ||||    
T  1806361 ctatttttcagaagctatt 1806343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 363 - 453
Target Start/End: Complemental strand, 5893976 - 5893886
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcatttttt 453  Q
    ||||| ||||| |||||||||| || |||||||||  |||||| |||| | |||||||||||| |||||||||||||||||||||| ||||    
T  5893976 accacaagcttttagcttattttactagcttataacttattttccagacgctatttcaagtagcgtttgagcttatagcttatcatctttt 5893886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 368 - 445
Target Start/End: Complemental strand, 7292626 - 7292549
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||  ||||||||| |||||||||| ||| || ||||||||  |||||||||||||||||||    
T  7292626 gagcttatagcttatttcagaagcttataagctatttttcataagctacttcaagtaacgtttgagcttatagcttat 7292549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 361 - 470
Target Start/End: Original strand, 26561412 - 26561521
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcat 460  Q
    |||| |||||||||||| |||||||| ||||||||||  ||||||||| | | |||||||||||| |||||||||| |  ||||||| ||||| ||| ||    
T  26561412 ttacaacgagcttatagtttatttcaggagcttataacttatttttcaaacgctatttcaagtagcgtttgagcttttcacttatcactttttattttat 26561511  T
Q  461 ctttaccctt 470  Q
     |||||||||    
T  26561512 ttttaccctt 26561521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 440
Target Start/End: Original strand, 1225501 - 1225573
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatag 440  Q
    |||||||||  ||||||||| || |||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  1225501 gagcttatattttatttcacaagtttataagctattttttagaagttatttcaagtagcgtttgagcttatag 1225573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 29414980 - 29414924
Alignment:
Q  389 agcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  29414980 agcttataagctatttttcagaagctattccaagtagtgtttgagcttatagcttat 29414924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 34904037 - 34904093
Alignment:
Q  389 agcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  34904037 agcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 34904093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 366 - 445
Target Start/End: Complemental strand, 32563323 - 32563244
Alignment:
Q  366 acgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||| |||||||||  |||||||||  ||||||||||| | |||||||| ||||||||||| ||||| |||||    
T  32563323 acgagcttataacttatttcagaagcttataatttatttttcagacgctatttcaaatagtgtttgagattataacttat 32563244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 22756519 - 22756569
Alignment:
Q  271 tagggtatgtttggtaagtccactaaatgagcttatagcttatagcttata 321  Q
    |||||| ||||||||||| ||||||||||||||||||| ||||||||||||    
T  22756519 tagggtctgtttggtaagcccactaaatgagcttatagtttatagcttata 22756569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 29823118 - 29823036
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||| |||||||||||  |||||||||||  ||||||||| ||| ||||  |||||| |||||||||||||||||||    
T  29823118 accatgagctaatagcttattttgcgagcttataagttatttttcaaaagctattcaaagtagcgtttgagcttatagcttat 29823036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 365 - 470
Target Start/End: Complemental strand, 15131466 - 15131361
Alignment:
Q  365 cacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatcttt 464  Q
    |||||||||||| ||||||| || | ||||||   ||||||||||| | ||||||||||||  ||| ||| ||||||||||| |||||| |||||  |||    
T  15131466 cacgagcttataacttattttactaacttatagcttatttttcagacgctatttcaagtagcatttaagcatatagcttatctttttttttttcaaattt 15131367  T
Q  465 accctt 470  Q
    ||||||    
T  15131366 accctt 15131361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 202
Target Start/End: Complemental strand, 31144742 - 31144695
Alignment:
Q  155 cttttattagaagaaaaaagtgcttacatatagggacggagggagtaa 202  Q
    ||||||||||||| ||| |||||||| |||||||||||||||||||||    
T  31144742 cttttattagaaggaaagagtgcttatatatagggacggagggagtaa 31144695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 30416986 - 30416920
Alignment:
Q  138 ccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagtaagt 204  Q
    |||||||| ||| ||  ||||||||||| | ||| ||| ||||||||||||||||||||||||||||    
T  30416986 ccctatatgtaagcatccttttattagaggcaaagagttcttacatatagggacggagggagtaagt 30416920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 3832448 - 3832407
Alignment:
Q  273 gggtatgtttggtaagtccactaaatgagcttatagcttata 314  Q
    ||||||||||||||||  ||||||||||||||||||||||||    
T  3832448 gggtatgtttggtaagctcactaaatgagcttatagcttata 3832407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 278 - 333
Target Start/End: Complemental strand, 19178358 - 19178303
Alignment:
Q  278 tgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgac 333  Q
    ||||||||||| |  |||||| || |||||||||||||||||||| ||||||||||    
T  19178358 tgtttggtaagacatctaaattagtttatagcttatagcttataatctcgtttgac 19178303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 444
Target Start/End: Original strand, 19415351 - 19415426
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    |||||||||| | |||||||||||| |    ||||||||||| | |||||||||||| ||||||| ||||||||||    
T  19415351 agcttatagcgtttttcacgagcttgttgcttatttttcagacgctatttcaagtagcgtttgagtttatagctta 19415426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 333
Target Start/End: Complemental strand, 34685162 - 34685128
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgac 333  Q
    |||||| ||||||||||||||||||||||||||||    
T  34685162 gagcttttagcttatagcttataagctcgtttgac 34685128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Original strand, 11443033 - 11443086
Alignment:
Q  386 acgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttata 439  Q
    |||||||||||| ||||||| ||||   |||||||||||| |||||||||||||    
T  11443033 acgagcttataacctattttccagactctatttcaagtagcgtttgagcttata 11443086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 29823182 - 29823149
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    |||| |||||||||||||||||||||||||||||    
T  29823182 agctcatagcttatagcttataagctcgtttgac 29823149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 32731759 - 32731792
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  32731759 agcttttagcttatagcttataagctcgtttgac 32731792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 34903960 - 34903993
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  34903960 agcttttagcttatagcttataagctcgtttgac 34903993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 427 - 467
Target Start/End: Original strand, 34544341 - 34544381
Alignment:
Q  427 gtttgagcttatagcttatcattttttctttcatctttacc 467  Q
    |||||| |||||||||||||||||||||| ||| |||||||    
T  34544341 gtttgaacttatagcttatcattttttctgtcaactttacc 34544381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 345 - 548
Target Start/End: Complemental strand, 72866 - 72655
Alignment:
Q  345 gtttggtaatggtctctt-accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagc-- 441  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||| |||||||| ||||  |||||||||||| |||||||||||||||      
T  72866 gtttggtaatgatctctttaccacgagcttatagcttatttcacaagcttataagctattttttagaacctatttcaagtagcgtttgagcttatagctt 72767  T
Q  442 -----ttatcattttttctttcatctttacccttgctattttctct--aataaccaattctacccctatag-ttttaaataaaatatctatgttttgatt 533  Q
         ||||||||||||||| |||||||||||||||||||||||||  || |||||||||||| ||||||| |||||||||||||||| || |||   |     
T  72766 atagcttatcattttttcttccatctttacccttgctattttctctaaaaaaaccaattctacacctatagtttttaaataaaatatcaatattt---ta 72670  T
Q  534 aatgctcacaaatga 548  Q
    |||||||||||||||    
T  72669 aatgctcacaaatga 72655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 1e-46; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 345 - 548
Target Start/End: Original strand, 40893418 - 40893629
Alignment:
Q  345 gtttggtaatggtctctt-accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttg-------agctt 436  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||| |||||||| ||||  |||||||||||| |||||       |||||    
T  40893418 gtttggtaatgatctctttaccacgagcttatagcttatttcacaagcttataagctattttttagaacctatttcaagtagcgtttgagcttatagctt 40893517  T
Q  437 atagcttatcattttttctttcatctttacccttgctattttctct--aataaccaattctacccctatag-ttttaaataaaatatctatgttttgatt 533  Q
    |||||||||||||||||||| |||||||||||||||||||||||||  || |||||||||||| ||||||| |||||||||||||||| || |||   |     
T  40893518 atagcttatcattttttcttccatctttacccttgctattttctctaaaaaaaccaattctacacctatagtttttaaataaaatatcaatattt---ta 40893614  T
Q  534 aatgctcacaaatga 548  Q
    |||||||||||||||    
T  40893615 aatgctcacaaatga 40893629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 300 - 470
Target Start/End: Complemental strand, 42375936 - 42375766
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaac 399  Q
    ||||| ||||||||||||||||||||||||||||       ||| |||||||||   | | | |||| |||||||||||||||||||||||||||||| |    
T  42375936 agcttttagcttatagcttataagctcgtttgacaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagc 42375837  T
Q  400 tatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |||||||||    
T  42375836 tatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttaccctt 42375766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 47471116 - 47470970
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnnctcc-gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        | | ||||||||||  | | | |||| |||||||||||||||||||||||||||||||    
T  47471116 agcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataaa 47471017  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  47471016 ctatttttcagaagttattccaagtagcgtttgagcttatagcttat 47470970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 23029786 - 23029937
Alignment:
Q  296 aatgagcttatagcttatagcttataagctcgtttgacnnnnnnn--ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagctt 393  Q
    ||||||||||||||||||||||||||||||||| ||||         ||  ||||||||||| | | | |||| ||||||||||||||||||||||||||    
T  23029786 aatgagcttatagcttatagcttataagctcgtctgacgaaaattagctttgtttggtaatgctttttcaccatgagcttatagcttatttcacgagctt 23029885  T
Q  394 ataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||| |||||||| |||| ||||||| |||||||||||||||||||    
T  23029886 ataaactattattcagaagctattccaagtagcgtttgagcttatagcttat 23029937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 363 - 499
Target Start/End: Complemental strand, 11466129 - 11465993
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||||| ||||||| |||||||| ||||| |||| ||||||| |||||||||||||||||||  ||||||||| ||  |    
T  11466129 accatgagcttatagcttatttcacgaacttataagctattttttagaagctattccaagtagcgtttgagcttatagcttattgttttttcttccactt 11466030  T
Q  463 ttacccttgctattttctctaataaccaattctaccc 499  Q
    |||||||| ||||||| ||||||| ||| || |||||    
T  11466029 ttacccttactattttttctaatatccatttttaccc 11465993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 278 - 445
Target Start/End: Original strand, 1342755 - 1342923
Alignment:
Q  278 tgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttata 376  Q
    ||||||||||  |||  ||| |||||||||||||||||||||||||||||| ||||        ||| ||||||||| | | | |||| |||||||||||    
T  1342755 tgtttggtaacaccaaaaaaagagcttatagcttatagcttataagctcgtctgacaaaaaaagctctgtttggtaacgcttttttacaacgagcttata 1342854  T
Q  377 gcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||  ||||||||| |||||||||||||| || ||||||||| |||||||||||||||||||    
T  1342855 gcttatttcagaagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttat 1342923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 17192532 - 17192425
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||| ||| |||||||| ||  |    
T  17192532 accatgagtttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttctcactttttcttccaatt 17192433  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  17192432 ttaccctt 17192425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 343 - 470
Target Start/End: Original strand, 35000757 - 35000884
Alignment:
Q  343 ccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagct 442  Q
    ||||||||||||||||| | | || |||||||||||||||||||| || ||||||||||||||||||| | |||| ||||||| ||||||||||||||||    
T  35000757 ccgtttggtaatggtctttcatcaggagcttatagcttatttcacaagtttataaactatttttcagatgctattccaagtagcgtttgagcttatagct 35000856  T
Q  443 tatcattttttctttcatctttaccctt 470  Q
    |||  ||||||||| ||  |||||||||    
T  35000857 tattgttttttcttccacttttaccctt 35000884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 47587195 - 47587088
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |    
T  47587195 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaatt 47587096  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  47587095 ttaccctt 47587088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 31511300 - 31511447
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||    
T  31511300 gagcttttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 31511399  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  31511400 gctatttttcagaagctattccaagtagcgtttgagcttatagcttat 31511447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 368 - 445
Target Start/End: Complemental strand, 21254782 - 21254705
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  21254782 gagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 21254705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 27655827 - 27655681
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    |||||||||||| ||||||||||||||||||||         ||| ||||||||||  | | |||||| ||||||||||||||||||| ||||||||||     
T  27655827 agcttatagcttttagcttataagctcgtttgataaaaaaagctctgtttggtaatacttttttaccatgagcttatagcttatttcaagagcttataag 27655728  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  27655727 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 27655681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 307 - 484
Target Start/End: Complemental strand, 27869709 - 27869531
Alignment:
Q  307 agcttatagcttataagctcgtttgacnnnnnnnctcc-gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttt 405  Q
    |||||||||||||||||||||||||||        ||| |||| |||||||||| | |||||  ||||||| |||||||||||||||||||| |||||||    
T  27869709 agcttatagcttataagctcgtttgacaaaaaaagtcctgtttagtaatggtctttcaccacccgcttataacttatttcacgagcttataagctatttt 27869610  T
Q  406 tcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacccttgctattttctctaa 484  Q
    || || |||||| ||||||| ||||||| |||||||||||  ||||||||| |||  ||||||||  |||||| |||||    
T  27869609 tcggacgttattccaagtagcgtttgagtttatagcttattgttttttcttccattattacccttattattttatctaa 27869531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 36246530 - 36246384
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  36246530 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 36246431  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  36246430 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 36246384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 42587537 - 42587391
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  42587537 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 42587438  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  42587437 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 42587391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 43254104 - 43254250
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  43254104 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 43254203  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  43254204 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 43254250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 45687070 - 45686924
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  45687070 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 45686971  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  45686970 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 45686924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 361 - 470
Target Start/End: Original strand, 46757773 - 46757882
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcat 460  Q
    |||| ||||||||||| ||||||||| |||||||||| |||||||||||||| || ||||||||| |||||||||||||||||||||| ||||||| |||    
T  46757773 ttacaacgagcttataacttatttcatgagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttatcatattttcttccat 46757872  T
Q  461 ctttaccctt 470  Q
     |||| ||||    
T  46757873 ttttatcctt 46757882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 43134406 - 43134551
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaac 399  Q
    ||||| ||||||||||||||||||||||||| ||       ||| |||||||||   | | | |||| |||||||||||||||||||||||||||||| |    
T  43134406 agcttttagcttatagcttataagctcgtttcacaaaaaagctctgtttggtaacactttttgaccatgagcttatagcttatttcacgagcttataagc 43134505  T
Q  400 tatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||| |||| ||||||| ||||||||||||| |||||    
T  43134506 tatttttcagaagctattccaagtagcgtttgagcttataacttat 43134551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 44596673 - 44596757
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  44596673 ttaccatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 44596757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 19832080 - 19831973
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| ||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |    
T  19832080 accatgagcttatagcttatttcacgagcttataagctatttttcaaaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaatt 19831981  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  19831980 ttaccctt 19831973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 483072 - 482990
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  483072 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 482990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 21374698 - 21374780
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  21374698 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 21374780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 27089811 - 27089664
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||    
T  27089811 gagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 27089712  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     |||||||||||||| |||| ||| ||| |||||||||||||||||||    
T  27089711 gctatttttcagaagctattccaaatagcgtttgagcttatagcttat 27089664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 27188490 - 27188637
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||    
T  27188490 gagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 27188589  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     |||||||||||||| |||| ||| ||| |||||||||||||||||||    
T  27188590 gctatttttcagaagctattccaaatagcgtttgagcttatagcttat 27188637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 33026941 - 33027023
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  33026941 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 33027023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 33203758 - 33203676
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| |||||    
T  33203758 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttataacttat 33203676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 35587644 - 35587726
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  35587644 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 35587726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 40637250 - 40637168
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  40637250 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 40637168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 9487477 - 9487554
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  9487477 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 9487554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 10312183 - 10312037
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  10312183 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 10312084  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| ||||||||||||| |||||    
T  10312083 ctatttttcagaagctattccaagtagcgtttgagcttatatcttat 10312037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 368 - 445
Target Start/End: Complemental strand, 12345152 - 12345075
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||  ||||||||||||||||||    
T  12345152 gagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcatttgagcttatagcttat 12345075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 17844545 - 17844691
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||||||| |||||| |||||||||||| ||||        ||| ||||||||||| | | | |||| ||||||||||||||||||||||||||||||     
T  17844545 agcttatagtttatagtttataagctcgtctgacaaaaaaagctctgtttggtaatgctatttcaccatgagcttatagcttatttcacgagcttataag 17844644  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| ||||  |||||| |||||||||||||||||||    
T  17844645 ctatttttcagaagctattctaagtagcgtttgagcttatagcttat 17844691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 470
Target Start/End: Original strand, 36436155 - 36436325
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaac 399  Q
    ||||| ||||||||| ||||||||||||||||||       ||  |||||||||   | | | |||| |||||||||||||||||||||||||||||| |    
T  36436155 agcttttagcttatatcttataagctcgtttgacaaaaaagctatgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagc 36436254  T
Q  400 tatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    ||||||||||||| |||| ||| ||| ||||||||||||| ||| ||| |||||||| ||  |||||||||    
T  36436255 tatttttcagaagctattccaaatagcgtttgagcttataacttctcactttttcttccaattttaccctt 36436325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 46879616 - 46879532
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||||| |||||||||||||||||||    
T  46879616 ttacaacgagcttatagcttatttcaggagcttataagctatttttcagaagctacttcaagtagcgtttgagcttatagcttat 46879532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 21313879 - 21313772
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||| ||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |    
T  21313879 accatgagcttatagcttatttcacaagcttataagctatttttcaaaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaatt 21313780  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  21313779 ttaccctt 21313772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 21742037 - 21742119
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  21742037 accatgagcttatagcttatttcacgagcttaaaagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 21742119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 28425701 - 28425619
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||| ||| |||| |||||||||||||||||||||||||||    
T  28425701 accatgagcttatagcttatttcacgagcttataagttatttttcataagctattccaagtagtgtttgagcttatagcttat 28425619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 34709298 - 34709380
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||| ||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  34709298 accatgagcttatagtttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 34709380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 36407293 - 36407375
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  36407293 accatgagcttataacttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 36407375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 40106095 - 40106013
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||  |||||||||||||| ||||    
T  40106095 accatgagcttatagcttatttcacgagcttataaactatttttcagaagctattccaagtaacgtttgagcttatagtttat 40106013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 40258922 - 40259004
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  40258922 accatgagcttataacttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 40259004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 45222163 - 45222081
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||| ||||||||    
T  45222163 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttttagcttat 45222081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 368 - 445
Target Start/End: Complemental strand, 48832138 - 48832061
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| |||| ||||||| |||||||||||||||||||    
T  48832138 gagcttatagcttatttcacgagcttataagctatttttcaaaagctattccaagtagcgtttgagcttatagcttat 48832061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 9485781 - 9485863
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||   ||||||||||||||||||    
T  9485781 accatgagcttatagcttatttcacgagcttataagctatttttcaaaagctatttcaagtatcatttgagcttatagcttat 9485863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 44743782 - 44743864
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||  |||||| |||||||||||    
T  44743782 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcatttgagtttatagcttat 44743864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 48313514 - 48313432
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||| |||| |||||||  ||||||||||||||||||    
T  48313514 accatgagcttatagcttatttcacaagcttataagctatttttcagaagctattccaagtagcttttgagcttatagcttat 48313432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 345 - 470
Target Start/End: Complemental strand, 22642359 - 22642234
Alignment:
Q  345 gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    ||||||||| ||| | | |||||||||||||||||||||||||||| |||||| |||||||| | | | ||||  ||||||  |||||||||||||||||    
T  22642359 gtttggtaacggtttttcaccacgagcttatagcttatttcacgagtttataagctattttttaaacgctattctaagtagcatttgagcttatagctta 22642260  T
Q  445 tcattttttctttcatctttaccctt 470  Q
    |||| |||||||  || |||||||||    
T  22642259 tcatattttcttctatttttaccctt 22642234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 19757608 - 19757524
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||| |||| |||||||||| |||||||||| ||| || ||||||||| |||||||||||||||||||    
T  19757608 ttacaacgagcttatagcttaattcaggagcttataagctatttttcaaaagctacttcaagtagcgtttgagcttatagcttat 19757524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 374 - 445
Target Start/End: Complemental strand, 38531261 - 38531191
Alignment:
Q  374 atagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||    
T  38531261 atagcttattttacgagcttataagctatttttcagaagtta-ttcaagtagcgtttgagcttatagcttat 38531191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 361 - 468
Target Start/End: Original strand, 45672357 - 45672464
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcat 460  Q
    |||| |||| ||||||  |||||| |||| ||||||| |||||||||||| |||||||||||||| |||||||||||||| ||||||| |||| || |||    
T  45672357 ttacaacgaacttataatttattttacgaacttataagctatttttcagacgttatttcaagtagcgtttgagcttatagtttatcatcttttattccat 45672456  T
Q  461 ctttaccc 468  Q
     |||||||    
T  45672457 ttttaccc 45672464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 48590779 - 48590861
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||| ||| ||||  |||||| |||||||||||||||||||    
T  48590779 accatgagcttatagcttatttcacgagcttataagttatttttcaaaagctattcaaagtagcgtttgagcttatagcttat 48590861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 49148397 - 49148479
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||| | |||||||||||||| |||| |||| || |||||||||||||| ||||    
T  49148397 accatgagcttatagcttatttcacgagcttatgagctatttttcagaagctattccaagcagcgtttgagcttatagtttat 49148479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 36612203 - 36612119
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||| |||||||||||| ||| |||||| |||||||| ||||| || ||||||||| |||||||||||||||||||    
T  36612203 ttacaacgagcttttagcttatttcaggagtttataagctattttttagaagctacttcaagtagcgtttgagcttatagcttat 36612119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 278 - 445
Target Start/End: Complemental strand, 791509 - 791341
Alignment:
Q  278 tgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttata 376  Q
    ||||||||||| |||   ||||||||||||| |||||| ||||||||||||||||         ||| ||||| ||| | | | |||| |||| ||||||    
T  791509 tgtttggtaagcccatctaatgagcttatagtttatagtttataagctcgtttgataaaaaaagctctgtttgataacgattttttacaacgaacttata 791410  T
Q  377 gcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||| | |||||||||| |||||||||||| | |||| ||||||| |||||| ||||||||||||    
T  791409 gcttattttatgagcttataagctatttttcagatgctattacaagtagcgtttgaacttatagcttat 791341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 372 - 439
Target Start/End: Original strand, 48620531 - 48620598
Alignment:
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttata 439  Q
    |||||| |||||||||||||||||||||||||||||||||  |||||||||||| |||||||| ||||    
T  48620531 ttatagtttatttcacgagcttataaactatttttcagaaactatttcaagtagcgtttgagcatata 48620598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 372 - 452
Target Start/End: Original strand, 38481354 - 38481434
Alignment:
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||||||||||||||||||  ||||| |||||||||| ||| |||| ||||||| ||||||||||||| ||| ||| ||||    
T  38481354 ttatagcttatttcacgagtctataagctatttttcaaaagctattccaagtagcgtttgagcttataacttctcactttt 38481434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 391 - 470
Target Start/End: Original strand, 47584185 - 47584264
Alignment:
Q  391 cttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||| ||||||||| |||| |||| |  ||| |||||||||    
T  47584185 cttataaactatttttcagaagttattccaaatagcgtttgagtttatagcttctcatattttatcccatttttaccctt 47584264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 368 - 425
Target Start/End: Complemental strand, 21316669 - 21316612
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtag 425  Q
    |||||||||||||||||||  ||||||||| |||||||||||||| |||| |||||||    
T  21316669 gagcttatagcttatttcataagcttataagctatttttcagaagctattccaagtag 21316612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 22621550 - 22621466
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||| |||||| |||||||| ||||| ||||  |||||||||||  |||||||||| || ||||||||||||| |||||    
T  22621550 ttacaacgagattatagtttatttcaggagctcataacttatttttcagacattatttcaagcagcgtttgagcttataacttat 22621466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 24170860 - 24170923
Alignment:
Q  382 tttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||| |||||||||| ||||||||||||  ||||| ||||||||| ||||||||||| |||||    
T  24170860 tttcatgagcttataagctatttttcagacattattccaagtagtgcttgagcttataacttat 24170923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 28885557 - 28885482
Alignment:
Q  126 tactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    ||||||||  |||| ||||| ||| ||| ||||||||||| |||||  |||||||||||||||||||||| |||||    
T  28885557 tactccctccgtccttatatgtaagcacccttttattagaggaaaatggtgcttacatatagggacggagagagta 28885482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 123 - 194
Target Start/End: Complemental strand, 31448442 - 31448371
Alignment:
Q  123 atatactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacgga 194  Q
    |||||||| ||  |||||||||||||| ||| ||||||||||| | |||  |||||||||||||||||||||    
T  31448442 atatactctctccgtccctatatctaagcacccttttattagatgcaaagggtgcttacatatagggacgga 31448371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 368 - 442
Target Start/End: Original strand, 39229953 - 39230027
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagct 442  Q
    ||||||||| | |||||||||| |||||||  |||||||||||   ||||| || ||||||||||||||||||||    
T  39229953 gagcttataacctatttcacgaacttataacttatttttcagatactattttaaatagtgtttgagcttatagct 39230027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 19989144 - 19989079
Alignment:
Q  136 gtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    |||||||||||||| |||  |||||||||| | |||  ||||||||||||||| ||||||||||||    
T  19989144 gtccctatatctaagcaccattttattagaggcaaatggtgcttacatataggaacggagggagta 19989079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 361 - 406
Target Start/End: Original strand, 21358647 - 21358692
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactattttt 406  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||    
T  21358647 ttaccacaaacttatagcttatttcacgagtttataaactattttt 21358692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 306 - 403
Target Start/End: Original strand, 32168840 - 32168938
Alignment:
Q  306 tagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatt 403  Q
    ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| |||||||||||||||||||||||||||||| |||||    
T  32168840 tagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctatt 32168938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 389 - 470
Target Start/End: Original strand, 39698930 - 39699011
Alignment:
Q  389 agcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||| || |||||||||||||| |||| |||||||  |||||||||||||||| ||| ||||  |||||  |||||||||    
T  39698930 agcttacaagctatttttcagaagctattccaagtagcatttgagcttatagcttctcacttttaatttcaattttaccctt 39699011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 363 - 410
Target Start/End: Original strand, 24170809 - 24170856
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcaga 410  Q
    |||| ||| ||||||||||||||| |||||||||| ||||||||||||    
T  24170809 accatgagtttatagcttatttcatgagcttataagctatttttcaga 24170856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 455
Target Start/End: Original strand, 7633780 - 7633818
Alignment:
Q  417 ttcaagtagtgtttgagcttatagcttatcattttttct 455  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  7633780 ttcaagtagtgtttgagcttataacttattattttttct 7633818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 10248864 - 10248806
Alignment:
Q  140 ctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggaggga 198  Q
    |||||||||| ||| ||||||||||| | ||| |||||||| ||| |||||||||||||    
T  10248864 ctatatctaagcacccttttattagatgtaaagagtgcttatatagagggacggaggga 10248806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 333
Target Start/End: Original strand, 35587579 - 35587613
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgac 333  Q
    |||||| ||||||||||||||||||||||||||||    
T  35587579 gagcttttagcttatagcttataagctcgtttgac 35587613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 376 - 442
Target Start/End: Original strand, 41406276 - 41406341
Alignment:
Q  376 agcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagct 442  Q
    ||||| |||||| |||||||||| | ||||| ||||| ||||||||||||  |||||||||||||||    
T  41406276 agcttttttcactagcttataaagt-tttttgagaagctatttcaagtagcttttgagcttatagct 41406341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 9077535 - 9077600
Alignment:
Q  136 gtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    |||| ||||| ||| ||| ||||||||||| | ||| |||| |||||||||||||| |||||||||    
T  9077535 gtccttatatttaagcactcttttattagagggaaagagtgtttacatatagggacagagggagta 9077600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 211
Target Start/End: Complemental strand, 25098267 - 25098234
Alignment:
Q  178 ttacatatagggacggagggagtaagtttttaga 211  Q
    ||||||||||||||||||||||||| ||||||||    
T  25098267 ttacatatagggacggagggagtaaatttttaga 25098234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 28425765 - 28425732
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||||||||||||||||||||| ||||||||||    
T  28425765 agcttatagcttatagcttataaactcgtttgac 28425732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 40637314 - 40637281
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  40637314 agcttttagcttatagcttataagctcgtttgac 40637281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 369 - 445
Target Start/End: Complemental strand, 21740229 - 21740154
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||  || |||||| |||||||||||||  || || || ||| |||||| ||||||||||||    
T  21740229 agcttatagcttatttcagaagtttataagctatttttcagaaactacttgaaatagcgtttga-cttatagcttat 21740154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 414 - 470
Target Start/End: Original strand, 32168935 - 32168991
Alignment:
Q  414 tatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |||||||||    
T  32168935 tattccaagtagcgtttgagcttatagcttctcactttttcttccaattttaccctt 32168991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 1e-46; HSPs: 91)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 278 - 445
Target Start/End: Original strand, 16474749 - 16474917
Alignment:
Q  278 tgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttata 376  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||        ||| ||||||||||||||||||||||||||||||||    
T  16474749 tgtttggtaagcccattaaatgagcttatagcttatagcttataaactcgtttgacaaaaatagctctgtttggtaatggtctcttaccacgagcttata 16474848  T
Q  377 gcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    | |||||||||||| |||||| |||||||| ||||| |||| ||||||| |||||||||||||||||||    
T  16474849 gtttatttcacgagattataagctattttttagaagctattccaagtagcgtttgagcttatagcttat 16474917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 385 - 529
Target Start/End: Complemental strand, 4657652 - 4657502
Alignment:
Q  385 cacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattt------tttctttcatctttacccttgctatttt 478  Q
    ||||||||||||| |||||||||||||  |||||||||||| ||||||||||||||||||| | ||      |||||| |||||||||||||||||||||    
T  4657652 cacgagcttataagctatttttcagaaactatttcaagtagagtttgagcttatagcttataacttatcatttttcttccatctttacccttgctatttt 4657553  T
Q  479 ctctaataaccaattctacccctatagttttaaataaaatatctatgtttt 529  Q
    |||||| ||| |||| |||||||||||||||||||||||||||||||||||    
T  4657552 ctctaaaaacaaattatacccctatagttttaaataaaatatctatgtttt 4657502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 299 - 470
Target Start/End: Complemental strand, 11100900 - 11100728
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||||||||||||||||||||||||||| ||||        ||| ||||||||| |   | |||| ||||||||||||||||||||||||||||||||    
T  11100900 gagcttatagcttatagcttataagctcgtctgacaaaaaaagctctgtttggtaacgtctttttacaacgagcttatagcttatttcacgagcttataa 11100801  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
     |||||||||||| | |||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  11100800 gctatttttcagacgctattccaagtagcgtttgagcttatagcttatcattttttcttccatctttaccctt 11100728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 306 - 452
Target Start/End: Complemental strand, 6893509 - 6893363
Alignment:
Q  306 tagcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttt 405  Q
    |||||||||| |||||||||||||||||       ||| |||||||||   | | |||||| |||||||||||||||||||||||||||||||||| |||    
T  6893509 tagcttatagtttataagctcgtttgacaaaaaagctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataaactagttt 6893410  T
Q  406 tcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  6893409 tcagaagttattccaagtagcgtttgagcttatagcttctcattttt 6893363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 13228609 - 13228464
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaac 399  Q
    ||||| ||||||||||||||||||||||||||||       ||| |||||||||   | | |||||| |||||||||||||||||||||||||||||| |    
T  13228609 agcttttagcttatagcttataagctcgtttgacaaaaaagctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataagc 13228510  T
Q  400 tatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||||    
T  13228509 tatttttcagaagctattccaagtagcgtttgagcttatagcttat 13228464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 278 - 445
Target Start/End: Complemental strand, 5382102 - 5381935
Alignment:
Q  278 tgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgagcttatag 377  Q
    ||||||||||| |   ||||| ||||||||||||||||||||||||||||||||||       ||| |||||||||   | | | ||||||||||||||     
T  5382102 tgtttggtaagacatttaaattagcttatagcttatagcttataagctcgtttgacaaaaaagctctgtttggtaacactttttcaccacgagcttataa 5382003  T
Q  378 cttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||| |||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  5382002 cttatttcatgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 5381935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 307 - 484
Target Start/End: Original strand, 648538 - 648716
Alignment:
Q  307 agcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttt 405  Q
    |||||||||||||||||||||| ||||        ||| ||||||||||| | | | |||| |||||||||||||||||||||||||||||| |||||||    
T  648538 agcttatagcttataagctcgtctgacaaaaaaagctctgtttggtaatgctttttcaccatgagcttatagcttatttcacgagcttataagctatttt 648637  T
Q  406 tcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacccttgctattttctctaa 484  Q
    ||||||| |||| ||||||| |||||||||||||||||||||   |||||| ||| |||||||||  |||||| |||||    
T  648638 tcagaagctattccaagtagcgtttgagcttatagcttatcaaaatttcttccatttttacccttaatattttatctaa 648716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 7651704 - 7651786
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  7651704 accatgagcttatagcttatttcacgagcttataatctatttttcagaagctatttcaagtagtgtttgagcttatagcttat 7651786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 4221546 - 4221439
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |    
T  4221546 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaatt 4221447  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  4221446 ttaccctt 4221439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 19347705 - 19347852
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn--ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||||||||| ||||||||||||||||||||          ||| ||||||||||  | | |||||| ||||||||||||||||||||||||||||||    
T  19347705 agcttatagcttttagcttataagctcgtttgataaaaaaaagctctgtttggtaatacttttttaccatgagcttatagcttatttcacgagcttataa 19347804  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  19347805 gctatttttcagaagctattccaagtagcgtttgagcttatagcttat 19347852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 300 - 470
Target Start/End: Original strand, 2671414 - 2671585
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| |||||||||||||||||||| |||||||||     
T  2671414 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacaagcttataag 2671513  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||| ||  |||||||||||  |||||||||    
T  2671514 ctatttttcagaagctattccaagtagcgtttgagcttatagcttctcgctttttctttcaattttaccctt 2671585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 445
Target Start/End: Complemental strand, 5998036 - 5997885
Alignment:
Q  295 aaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagctt 393  Q
    |||||||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||  ||||||||||||||||||||||||||    
T  5998036 aaatgagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccgtgagcttatagcttatttcacgagctt 5997937  T
Q  394 ataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  5997936 ataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 5997885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 10697333 - 10697415
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  10697333 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagtgtttgagcttatagcttat 10697415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 15530499 - 15530581
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  15530499 accatgagcttatagcttatttcacgagcttataaactatttttcagaagctattccaagtagcgtttgagcttatagcttat 15530581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 2236653 - 2236507
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  2236653 agcttttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 2236554  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  2236553 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2236507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 368 - 445
Target Start/End: Complemental strand, 6603978 - 6603901
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  6603978 gagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 6603901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 12774576 - 12774722
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  12774576 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 12774675  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  12774676 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 12774722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 345 - 470
Target Start/End: Original strand, 13936238 - 13936363
Alignment:
Q  345 gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    ||||||||| ||| | |||| ||||||||||||||||||||| |||||||||| |||||||||||| | ||||||||||||  |||||||||||||||||    
T  13936238 gtttggtaacggttttttacaacgagcttatagcttatttcatgagcttataagctatttttcagacgctatttcaagtagcatttgagcttatagctta 13936337  T
Q  445 tcattttttctttcatctttaccctt 470  Q
    ||| ||||| || |||  ||||||||    
T  13936338 tcactttttattccattattaccctt 13936363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 14647494 - 14647348
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  14647494 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 14647395  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  14647394 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 14647348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 24793972 - 24794118
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  24793972 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 24794071  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  24794072 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 24794118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 470
Target Start/End: Complemental strand, 29392243 - 29392073
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaac 399  Q
    ||||| |||||||||| |||||||||||||||||       ||| |||||||||   | | |||||| |||||||||||||||||||||||||||||| |    
T  29392243 agcttttagcttatagtttataagctcgtttgacaaaaaagctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataagc 29392144  T
Q  400 tatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    ||||||| | ||| |||| ||| ||| ||||||||||||||||| ||| |||||||| ||  |||||||||    
T  29392143 tattttttaaaagctattccaaatagcgtttgagcttatagcttctcactttttcttccaattttaccctt 29392073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 30299698 - 30299844
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  30299698 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 30299797  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  30299798 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 30299844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 299 - 456
Target Start/End: Complemental strand, 39246974 - 39246817
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgac-nnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||    
T  39246974 gagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacact-tttcaccatgagcttatagcttatttcacgagcttataa 39246876  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctt 456  Q
     |||||||||||||| |||| ||||||| ||||||||||||||||| ||| ||||||||    
T  39246875 gctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttctt 39246817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 9587259 - 9587152
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| ||||| || ||  |    
T  9587259 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttattccaatt 9587160  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  9587159 ttaccctt 9587152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 278 - 445
Target Start/End: Complemental strand, 26699265 - 26699097
Alignment:
Q  278 tgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttata 376  Q
    ||||||||||| |  |||||| |||||||||||||||| |||||||||||||||||        ||| |||||||||   | | | |||| |||||||||    
T  26699265 tgtttggtaagacacctaaattagcttatagcttataggttataagctcgtttgacaaataaagctctgtttggtaacactttttcaccatgagcttata 26699166  T
Q  377 gcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||| |||||||||| |||||||||||| | |||| ||||||| |||||||||||||||||||    
T  26699165 gcttatttcatgagcttataagctatttttcagaggctattccaagtagcgtttgagcttatagcttat 26699097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 278 - 445
Target Start/End: Complemental strand, 26968998 - 26968830
Alignment:
Q  278 tgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttata 376  Q
    ||||||||||| |  |||||| |||||||||||||||| |||||||||||||||||        ||| |||||||||   | | | |||| |||||||||    
T  26968998 tgtttggtaagacacctaaattagcttatagcttataggttataagctcgtttgacaaataaagctctgtttggtaacactttttcaccatgagcttata 26968899  T
Q  377 gcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||| |||||||||| |||||||||||| | |||| ||||||| |||||||||||||||||||    
T  26968898 gcttatttcatgagcttataagctatttttcagaggctattccaagtagcgtttgagcttatagcttat 26968830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 1174848 - 1174930
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  1174848 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 1174930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 4379322 - 4379404
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| |||||    
T  4379322 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttataacttat 4379404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 8024057 - 8023975
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  8024057 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 8023975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 9160765 - 9160683
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  9160765 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 9160683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 15443520 - 15443602
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||||||||||||||||||    
T  15443520 accatgagcttatagcttatttcacgagcttataaactatttttcagaagctattccaaatagcgtttgagcttatagcttat 15443602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 27130397 - 27130479
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  27130397 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 27130479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 31169060 - 31168978
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  31169060 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 31168978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 32381747 - 32381665
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  32381747 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 32381665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 32382913 - 32382995
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  32382913 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 32382995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 35235800 - 35235718
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  35235800 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 35235718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 35236740 - 35236658
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  35236740 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 35236658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 36685880 - 36685962
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  36685880 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 36685962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 39744615 - 39744533
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  39744615 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 39744533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 43402508 - 43402590
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||| |||||||||||||||||||    
T  43402508 accatgagcttatagcttatttcacgagcttataagctatttttcaaaagctatttcaagtagcgtttgagcttatagcttat 43402590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 1711340 - 1711194
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||||||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||| |||||||||| |||||||||     
T  1711340 agcttatagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttataacttatttcacaagcttataag 1711241  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  1711240 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 1711194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 12713312 - 12713458
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  12713312 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 12713411  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| |||||||  ||||||||||||||||||    
T  12713412 ctatttttcagaagctattccaagtagcatttgagcttatagcttat 12713458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 30412749 - 30412603
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||| ||||||||||||||||||||||||||     
T  30412749 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagtttatagcttatttcacgagcttataag 30412650  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  30412649 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 30412603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 39275485 - 39275569
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||||| |||| ||||||| |||||||||||||||||||    
T  39275485 ttaccatgagcttatagcttatttcacgagcttataagctattttttagaagctattccaagtagcgtttgagcttatagcttat 39275569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 370 - 445
Target Start/End: Original strand, 3670349 - 3670424
Alignment:
Q  370 gcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  3670349 gcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 3670424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 456
Target Start/End: Original strand, 13921787 - 13921882
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctt 456  Q
    ||||||||| |||||| ||||||||||||||||| || |||||||||||| | |||||||||||| |||||| |||||| ||||||||||||||||    
T  13921787 ttaccacgaacttataacttatttcacgagcttaaaagctatttttcagacgctatttcaagtagcgtttgaacttataacttatcattttttctt 13921882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 2178824 - 2178906
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  2178824 accatgagcttatagcttatttcacgagtttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2178906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 5591652 - 5591734
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  5591652 accatgagcttatagcttatttcacgaacttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 5591734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 12363685 - 12363603
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  12363685 accatgagcttataacttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 12363603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 19525813 - 19525895
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| |||| || |||||||||||||||||||    
T  19525813 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagcagcgtttgagcttatagcttat 19525895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 22977278 - 22977196
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| ||| |||| ||||||| |||||||||||||||||||    
T  22977278 accatgagcttatagcttatttcatgagcttataaactatttttcataagctattccaagtagcgtttgagcttatagcttat 22977196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 369 - 443
Target Start/End: Complemental strand, 30774259 - 30774185
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctt 443  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||    
T  30774259 agcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagctt 30774185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 35640004 - 35640086
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  35640004 accatgagtttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 35640086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 36028064 - 36027982
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||| ||||||||||||| |||||    
T  36028064 accatgagcttatagcttattttacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttataacttat 36027982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 278 - 445
Target Start/End: Complemental strand, 11063067 - 11062898
Alignment:
Q  278 tgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn--ctccgtttggtaatggtctcttaccacgagcttat 375  Q
    ||||||||||| |  |||||| |||||||||||||||||||||||||||||||| |         ||| |||||||||   | | | |||| ||||||||    
T  11063067 tgtttggtaagacatctaaattagcttatagcttatagcttataagctcgtttggcaaaaaaaagctctgtttggtaacactttttcaccatgagcttat 11062968  T
Q  376 agcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    | ||||||||| |||||||||| |||||||||||||| |||| ||||||| |||||||||||||| ||||    
T  11062967 aacttatttcatgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagtttat 11062898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 3037500 - 3037416
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| ||| |||||||||||||||||||||||||| |||||||||| ||| |||| ||||||| |||||||||||||||||||    
T  3037500 ttaccatgagtttatagcttatttcacgagcttataagctatttttcaaaagctattccaagtagcgtttgagcttatagcttat 3037416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 371 - 470
Target Start/End: Complemental strand, 13156951 - 13156852
Alignment:
Q  371 cttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||||||||||||| |||||| |||||||||||||| |||| |||||||  |||||||||||||||| ||| |||||||| ||  |||||||||    
T  13156951 cttatagcttatttcacgagtttataagctatttttcagaagctattccaagtagcttttgagcttatagcttctcactttttcttccaattttaccctt 13156852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 5521362 - 5521444
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||| ||||||| |||||||||||    
T  5521362 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattctaagtagcgtttgagtttatagcttat 5521444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 19956380 - 19956299
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||| |||| ||||||| |||||||||||||||||||    
T  19956380 accatgagcttatagcttatttcacgagcttataagcta-ttttcagaagctattccaagtagcgtttgagcttatagcttat 19956299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 375 - 470
Target Start/End: Original strand, 3669617 - 3669712
Alignment:
Q  375 tagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||||| |||||||||| |||||||||||||| ||||  |||||| ||||||||||||||||| ||| |||||||| ||  |||||||||    
T  3669617 tagcttatttcatgagcttataagctatttttcagaagctattcaaagtagcgtttgagcttatagcttctcactttttcttccaattttaccctt 3669712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 368 - 445
Target Start/End: Complemental strand, 6280523 - 6280446
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||| |||||||||| | ||||||||||||||||| ||||||||||||||||  ||| ||||||||||||||    
T  6280523 gagcttatagtttatttcacgggtttataaactatttttcataagttatttcaagtagcatttaagcttatagcttat 6280446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 368 - 445
Target Start/End: Complemental strand, 9627222 - 9627145
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||  ||||||||| |||||||||||||| || ||||||||| ||||||||||||| |||||    
T  9627222 gagcttatagcttatttcagaagcttataagctatttttcagaagctacttcaagtagcgtttgagcttataacttat 9627145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 11663955 - 11663882
Alignment:
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||||||||  ||||||||||||| ||||  |||||| |||||||||||||||||||    
T  11663955 ttatagcttatttcacgagcttataagttatttttcagaagctattctaagtagcgtttgagcttatagcttat 11663882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 363 - 437
Target Start/End: Original strand, 23920521 - 23920595
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagctta 437  Q
    |||| |||||||||| ||||||||||||||||||| |||||||||||| | |||| |||||||||||||| ||||    
T  23920521 accaggagcttatagtttatttcacgagcttataagctatttttcagacgctattccaagtagtgtttgaactta 23920595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 366 - 468
Target Start/End: Complemental strand, 32321732 - 32321630
Alignment:
Q  366 acgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatcttta 465  Q
    |||||||||||||||||||||||| |||| ||  |||||||||||   |||||||| ||  ||||||||||||||||||| ||||||| || ||| ||||    
T  32321732 acgagcttatagcttatttcacgaacttacaacttatttttcagactctatttcaaataacgtttgagcttatagcttataattttttattccatattta 32321633  T
Q  466 ccc 468  Q
    |||    
T  32321632 ccc 32321630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 372 - 470
Target Start/End: Original strand, 11780118 - 11780216
Alignment:
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    ||||||||| ||||  ||||||||||||||||||| |||  |||||| |||||  |||||||||||||| |||| ||||||| | |||| |||||||||    
T  11780118 ttatagcttttttcgtgagcttataaactattttttagactttattttaagtaacgtttgagcttatagtttataattttttgtctcatttttaccctt 11780216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 21743079 - 21743014
Alignment:
Q  136 gtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    |||||||||||||| ||| ||||||||||| | ||| |||||||||||||| ||||||||||||||    
T  21743079 gtccctatatctaagcactcttttattagaggcaaagagtgcttacatataaggacggagggagta 21743014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 375 - 456
Target Start/End: Complemental strand, 41471970 - 41471889
Alignment:
Q  375 tagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctt 456  Q
    |||||||||||| |||||| ||   |||||| |||| | |||||||| ||||||||||||||||||||||| ||||||||||    
T  41471970 tagcttatttcaggagcttttagcttattttccagacgctatttcaaatagtgtttgagcttatagcttattattttttctt 41471889  T

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Target: chr5; HSP #69
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 385 - 445
Target Start/End: Original strand, 6349426 - 6349486
Alignment:
Q  385 cacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||| | ||||  |||||| |||||||||||||||||||    
T  6349426 cacgagcttataaactatttttcagacgctattctaagtagcgtttgagcttatagcttat 6349486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 365 - 445
Target Start/End: Complemental strand, 27005925 - 27005845
Alignment:
Q  365 cacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||| |||||||||||||||| ||||||||||  |||||| || | | |||||||||||  |||||||||||||||||||    
T  27005925 cacgaacttatagcttatttcaagagcttataacttattttccaaacgctatttcaagtaacgtttgagcttatagcttat 27005845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 346 - 453
Target Start/End: Original strand, 2497610 - 2497717
Alignment:
Q  346 tttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||| | | | |||| ||| ||||| ||||||||||||||||||||  ||||||||| ||| ||||  || ||| ||||||||||||| |||||    
T  2497610 tttggtaatgctttttcaccatgagattataacttatttcacgagcttataagttatttttcaaaagctattctaaatagcgtttgagcttataacttat 2497709  T
Q  446 catttttt 453  Q
    ||| ||||    
T  2497710 catctttt 2497717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 121 - 191
Target Start/End: Complemental strand, 8564974 - 8564904
Alignment:
Q  121 aaatatactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggac 191  Q
    |||||||||||||  |||||||||| ||| |||  |||||||||||||||||| |||||||||||| ||||    
T  8564974 aaatatactccctccgtccctatatgtaagcacctttttattagaagaaaaaaatgcttacatataaggac 8564904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 42323672 - 42323598
Alignment:
Q  371 cttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| | ||||| ||||| |||||| |||||||||||| | ||||  ||||||||||||||||||||||||||    
T  42323672 cttataacatattttacgagtttataagctatttttcagacgctattctaagtagtgtttgagcttatagcttat 42323598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 278 - 333
Target Start/End: Complemental strand, 22977384 - 22977329
Alignment:
Q  278 tgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgac 333  Q
    ||||||||||| |  |||||| |||||||||||||||| |||||||||||||||||    
T  22977384 tgtttggtaagacatctaaattagcttatagcttatagtttataagctcgtttgac 22977329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 412 - 466
Target Start/End: Complemental strand, 8638288 - 8638234
Alignment:
Q  412 gttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttac 466  Q
    |||||||||  ||| |||||| ||||||||||||||||||||||||||| |||||    
T  8638288 gttatttcatatagcgtttgaacttatagcttatcattttttctttcatttttac 8638234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 32636287 - 32636225
Alignment:
Q  139 cctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    ||||||| ||||||| ||||||||||| | |||||||  ||||||||| ||||||||||||||    
T  32636287 cctatatgtaaacacccttttattagaggcaaaaagtatttacatataaggacggagggagta 32636225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 9587324 - 9587291
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||||||||||||||||||||||||||||||||    
T  9587324 agcttatagcttatagcttataagctcgtttgac 9587291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 391 - 456
Target Start/End: Complemental strand, 25872273 - 25872208
Alignment:
Q  391 cttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctt 456  Q
    |||||||  ||||||||||||| |||| ||||||| ||||||||||||||||| |||  |||||||    
T  25872273 cttataatttatttttcagaagctattccaagtagagtttgagcttatagcttctcaccttttctt 25872208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 4875706 - 4875790
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||| |||||| |||||| | ||| |||||| |||||||| | ||| ||||  |||||| |||||||||||||||||||    
T  4875706 ttactacgagtttatagtttattttaggagtttataagctattttttaaaagctattcaaagtagcgtttgagcttatagcttat 4875790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 361 - 441
Target Start/End: Complemental strand, 18480637 - 18480557
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagc 441  Q
    |||| ||||||||||| |||||||||| ||||||||   ||||||| ||| | ||| ||||||||  ||||||||||||||    
T  18480637 ttactacgagcttatatcttatttcacaagcttatagtttattttttagacgctatctcaagtagcatttgagcttatagc 18480557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 376
Target Start/End: Complemental strand, 4657672 - 4657641
Alignment:
Q  345 gtttggtaatggtctcttaccacgagcttata 376  Q
    ||||||||||||||||||||||||||||||||    
T  4657672 gtttggtaatggtctcttaccacgagcttata 4657641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 484
Target Start/End: Original strand, 7896599 - 7896697
Alignment:
Q  385 cacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacccttgctattttctctaa 484  Q
    ||||||||||||| ||||||| || | | |||||||| ||| ||||||| ||||||||||| || |||||||  || |||||||||  |||||| |||||    
T  7896599 cacgagcttataagctatttt-caaacgctatttcaaatagcgtttgagtttatagcttataatcttttcttctatttttacccttattattttatctaa 7896697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 4221610 - 4221577
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  4221610 agcttttagcttatagcttataagctcgtttgac 4221577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 5591588 - 5591621
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  5591588 agcttttagcttatagcttataagctcgtttgac 5591621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 201
Target Start/End: Original strand, 8564936 - 8564969
Alignment:
Q  168 aaaaaagtgcttacatatagggacggagggagta 201  Q
    ||||| ||||||||||||||||||||||||||||    
T  8564936 aaaaaggtgcttacatatagggacggagggagta 8564969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 39744679 - 39744646
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  39744679 agcttttagcttatagcttataagctcgtttgac 39744646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 9475083 - 9475151
Alignment:
Q  126 tactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacgga 194  Q
    |||||||| ||||| ||||| ||| |||  ||||||| || | |||| |||||||||||||||||||||    
T  9475083 tactccctctgtccttatatataagcaccattttattcgaggcaaaaggtgcttacatatagggacgga 9475151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 173 - 201
Target Start/End: Original strand, 27642721 - 27642749
Alignment:
Q  173 agtgcttacatatagggacggagggagta 201  Q
    |||||||||||||||||||||||||||||    
T  27642721 agtgcttacatatagggacggagggagta 27642749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 300 - 332
Target Start/End: Original strand, 32382849 - 32382881
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttga 332  Q
    ||||| |||||||||||||||||||||||||||    
T  32382849 agcttttagcttatagcttataagctcgtttga 32382881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 361 - 433
Target Start/End: Original strand, 33694738 - 33694810
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgag 433  Q
    ||||||||||||||||  |||||| || || ||||||  ||||||||||| ||||||  |||||| |||||||    
T  33694738 ttaccacgagcttataatttattttacaagtttataagttatttttcagacgttattcgaagtagcgtttgag 33694810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 41686823 - 41686779
Alignment:
Q  400 tatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    ||||||||| | | ||||| |||||||||||||||||||||||||    
T  41686823 tatttttcaaacgctattttaagtagtgtttgagcttatagctta 41686779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 2e-41; HSPs: 99)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 285 - 443
Target Start/End: Complemental strand, 52703257 - 52703098
Alignment:
Q  285 taagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnnctcc-gtttggtaatggtctcttaccacgagcttatagcttatt 383  Q
    |||| ||| ||| ||| ||||||||||||||||||||||||||||||||        | | ||||||||||| |||||||||||||||||||||||||||    
T  52703257 taagcccattaattgaacttatagcttatagcttataagctcgtttgacaaaaaaaattctgtttggtaatgctctcttaccacgagcttatagcttatt 52703158  T
Q  384 tcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctt 443  Q
    ||||||||||||||  ||||||||||||| |||||||||||| |||||||||||||||||    
T  52703157 tcacgagcttataagttatttttcagaagctatttcaagtagcgtttgagcttatagctt 52703098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 271 - 445
Target Start/End: Complemental strand, 7781324 - 7781149
Alignment:
Q  271 tagggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctctt-accacg 368  Q
    |||||| ||||||||||  |||  ||| ||||||||||||||||||||||||||||||||||         ||| |||||||| || ||| || ||||||    
T  7781324 tagggtctgtttggtaaagccatcaaacgagcttatagcttatagcttataagctcgtttgataaaaaaagctctgtttggtactg-tcttttcaccacg 7781226  T
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  7781225 agcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagtgtttgagcttatagcttat 7781149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 299 - 470
Target Start/End: Complemental strand, 38967595 - 38967424
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    |||||| ||||||||||||||||||||||||||||       ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  38967595 gagcttttagcttatagcttataagctcgtttgacaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 38967496  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |||||||||    
T  38967495 ctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttaccctt 38967424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 300 - 470
Target Start/End: Complemental strand, 13121715 - 13121544
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  13121715 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 13121616  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||||||| |||||||| ||  |||||||||    
T  13121615 ctatttttcagaagctattccaagtagcgtttgagcttatagcttatcactttttcttccaattttaccctt 13121544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 300 - 470
Target Start/End: Complemental strand, 18347546 - 18347376
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctctt-accacgagcttatagcttatttcacgagcttataaa 398  Q
    |||||||||||||||||||||||| | |||||||       ||| ||||||||||| ||| || ||||||||||||||||||||||||| |||||||||     
T  18347546 agcttatagcttatagcttataagtttgtttgacaaaaaagctctgtttggtaatg-tcttttcaccacgagcttatagcttatttcacaagcttataag 18347448  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    ||||||||||||   |||| ||||||||||||||||||||||||| ||| |||||||| ||  |||||||||    
T  18347447 ctatttttcagacactattccaagtagtgtttgagcttatagcttctcactttttcttccaattttaccctt 18347376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 296 - 478
Target Start/End: Original strand, 34086966 - 34087149
Alignment:
Q  296 aatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagctta 394  Q
    ||||||||||||||||||||||||||||||||| ||||        ||| ||||||||||  | | | |||| |||||||||||| ||||||||||||||    
T  34086966 aatgagcttatagcttatagcttataagctcgtctgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagctaatttcacgagctta 34087065  T
Q  395 taaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacccttgctatttt 478  Q
    ||| |||||||| ||||| |||| || |||| ||||||||||||||||||| |||||||||| ||  |||||||||| ||||||    
T  34087066 taagctatttttgagaagctattccaggtagcgtttgagcttatagcttattattttttcttccacttttacccttgttatttt 34087149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 3270662 - 3270808
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    |||||| ||||||||||||||||||||||||||||        || |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  3270662 gagcttttagcttatagcttataagctcgtttgacaaaaaaaatctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 3270761  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||    
T  3270762 ctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 3270808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 361 - 478
Target Start/End: Original strand, 25134914 - 25135031
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcat 460  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||| | ||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  25134914 ttacaacgagcttatagcttatttcacgagcttataagctatttttcagacgctattttaagtagtgtttgagcttatagcttatcactttttatttcat 25135013  T
Q  461 ctttacccttgctatttt 478  Q
      ||| |||| |||||||    
T  25135014 tattatccttactatttt 25135031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 295 - 470
Target Start/End: Complemental strand, 44719107 - 44718931
Alignment:
Q  295 aaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctctt-accacgagcttatagcttatttcacgagct 392  Q
    ||||||||| ||||||||||||||||||||| ||||| |        ||| ||||||||||| ||| || |||||||||||||||||||||| |||||||    
T  44719107 aaatgagctcatagcttatagcttataagcttgtttggcaaaaaaagctctgtttggtaatg-tcttttcaccacgagcttatagcttattttacgagct 44719009  T
Q  393 tataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||||||||||| | |||||||||||| |||| |||||||| ||| ||| |||||||||||  |||||||||    
T  44719008 tataaactatttttcagacgctatttcaagtagcgtttaagcttataacttctcactttttctttcaattttaccctt 44718931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 49822234 - 49822152
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  49822234 accatgagcttatagcttatttcacgagcttataaactattttttagaagttatttcaagtagcgtttgagcttatagcttat 49822152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 361 - 470
Target Start/End: Original strand, 25602052 - 25602161
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcat 460  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||| ||| |||||||| ||     
T  25602052 ttaccatgaccttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttctcactttttcttccaa 25602151  T
Q  461 ctttaccctt 470  Q
     |||||||||    
T  25602152 ttttaccctt 25602161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 29586162 - 29586308
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | |||||| ||||||||||||||||||||||||||||||     
T  29586162 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataag 29586261  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  29586262 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 29586308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 322931 - 323015
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||    
T  322931 ttaccatgagcttatagcttatttcacgagcttataaactatttttcagaagctattccaagtagcgtttgagcttatagcttat 323015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 345 - 445
Target Start/End: Original strand, 34318456 - 34318556
Alignment:
Q  345 gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    ||||||||||||| | | |||||||||||||||||||||| |||||||||||| |||||||||||| | |||| ||||||||||||||||||||||||||    
T  34318456 gtttggtaatggtttttcaccacgagcttatagcttattttacgagcttataagctatttttcagatgctattccaagtagtgtttgagcttatagctta 34318555  T
Q  445 t 445  Q
    |    
T  34318556 t 34318556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 36301235 - 36301090
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaac 399  Q
    ||||| ||||||||||||||||||||||||||||       ||| ||||| |||   | | | |||| |||||||||||||||||||||||||||||| |    
T  36301235 agcttttagcttatagcttataagctcgtttgacaaaaaagctctgtttgataacactttttcaccatgagcttatagcttatttcacgagcttataagc 36301136  T
Q  400 tatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||||    
T  36301135 tatttttcagaagctattccaagtagcgtttgagcttatagcttat 36301090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 363 - 470
Target Start/End: Original strand, 17046797 - 17046904
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |    
T  17046797 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaatt 17046896  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  17046897 ttaccctt 17046904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 368 - 470
Target Start/End: Complemental strand, 7711016 - 7710914
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacc 467  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  ||||||    
T  7711016 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaattttacc 7710917  T
Q  468 ctt 470  Q
    |||    
T  7710916 ctt 7710914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 300 - 470
Target Start/End: Original strand, 39826604 - 39826775
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  39826604 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 39826703  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||| |||  ||||||| ||  |||||||||    
T  39826704 ctatttttcagaagctattccaagtagcgtttgagcttatagcttctcacattttcttccaattttaccctt 39826775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 1918029 - 1918175
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  1918029 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 1918128  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  1918129 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 1918175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 29374334 - 29374480
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    |||||||||||| ||||||||||||||||||||         ||| ||||||||||  | | |||||| ||||||||||||||||||| ||||||||||     
T  29374334 agcttatagcttttagcttataagctcgtttgataaaaaaagctctgtttggtaatacttttttaccatgagcttatagcttatttcaagagcttataag 29374433  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  29374434 ctatttttcagaagctattccaagtagagtttgagcttatagcttat 29374480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 42064448 - 42064302
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  42064448 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 42064349  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  42064348 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 42064302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 342 - 466
Target Start/End: Original strand, 44956325 - 44956449
Alignment:
Q  342 tccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagc 441  Q
    |||||||||||||||| | |||||| ||||||||||||||||| ||||| ||||||  ||||||||||| | |||| ||||||| ||||||||||||| |    
T  44956325 tccgtttggtaatggttttttaccatgagcttatagcttatttaacgagattataagttatttttcagatgctattccaagtagagtttgagcttataac 44956424  T
Q  442 ttatcattttttctttcatctttac 466  Q
    ||||||| ||||||| ||| |||||    
T  44956425 ttatcatattttcttccatttttac 44956449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 375 - 470
Target Start/End: Original strand, 40719554 - 40719649
Alignment:
Q  375 tagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||| ||||  |||||  |||||||||    
T  40719554 tagcttatttcacgagcttataaactatttttcagaagttatttcaagtagcgtttgagtttatagcttctcacttttaatttcagttttaccctt 40719649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 2497990 - 2498072
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  2497990 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2498072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 19898975 - 19898893
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  19898975 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 19898893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 26204342 - 26204424
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  26204342 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 26204424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 26843819 - 26843901
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| |||||||||||    
T  26843819 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagtttatagcttat 26843901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 31150492 - 31150410
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  31150492 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 31150410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 38676557 - 38676639
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  38676557 accatgagcttatagcttatttcacgaacttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 38676639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 43727089 - 43727171
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  43727089 accatgagcttatagcttatttcatgagcttataaactatttttcagaagttattccaagtagcgtttgaacttatagcttat 43727171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 44909908 - 44909990
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  44909908 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 44909990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 50351035 - 50351182
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||    
T  50351035 gagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttaaccatgagcttatagcttatttcacgagcttataa 50351134  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     |||||||||||||| |||| ||||||| ||||||| |||||||||||    
T  50351135 gctatttttcagaagctattccaagtagcgtttgaggttatagcttat 50351182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 368 - 445
Target Start/End: Complemental strand, 36838757 - 36838680
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  36838757 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 36838680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 363 - 456
Target Start/End: Complemental strand, 47134598 - 47134505
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctt 456  Q
    |||| ||||||||||||||||||| |||||||||| |||||||||||||| ||||  |||||| ||||||||||||||||||||| ||||||||    
T  47134598 accatgagcttatagcttatttcatgagcttataagctatttttcagaagctattctaagtagcgtttgagcttatagcttatcactttttctt 47134505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 49220604 - 49220458
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac-nnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||  ||||||| ||||||||||||||||||||||     
T  49220604 agcttttagcttatagcttataagctcgtttgacaaaaaaaactctgtttggtaacactttttcaccgtgagcttacagcttatttcacgagcttataag 49220505  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||    
T  49220504 ctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 49220458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 30721755 - 30721608
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn--ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    ||||| ||||||||||||||||||||||||||||         ||| |||||||||   | | | |||| || |||||||||||||||||||||||||||    
T  30721755 agcttttagcttatagcttataagctcgtttgacaaaaaaaagctctgtttggtaacactttttcaccatgaacttatagcttatttcacgagcttataa 30721656  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  30721655 gctatttttcagaagctattccaagtagcgtttgagcttatagcttat 30721608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 371 - 470
Target Start/End: Original strand, 50540848 - 50540947
Alignment:
Q  371 cttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||||||||||||| |||||| |||||||||||||| |||| ||||||| ||||||||||||||||| |||| |||| | |||| |||||||||    
T  50540848 cttatagcttatttcacgagtttataagctatttttcagaagctattacaagtagcgtttgagcttatagcttctcatattttatctcatttttaccctt 50540947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 15313311 - 15313393
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  15313311 accatgagcttatagcttatttcacaagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 15313393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 15348892 - 15348974
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||| ||||    
T  15348892 accatgagcttatagcttatttcacgagcttataaattatttttcagaagctattccaagtagcgtttgagcttatagtttat 15348974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 17499952 - 17499870
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||| ||||||||||||||    
T  17499952 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttaagcttatagcttat 17499870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 29704151 - 29704069
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  29704151 accatgagcttataacttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 29704069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 33524596 - 33524678
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||| ||||    
T  33524596 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagtttat 33524678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 371 - 445
Target Start/End: Original strand, 34319465 - 34319539
Alignment:
Q  371 cttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  34319465 cttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 34319539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 30774158 - 30774231
Alignment:
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  30774158 ttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 30774231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 345 - 445
Target Start/End: Complemental strand, 28869096 - 28868996
Alignment:
Q  345 gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    ||||||||| ||| | |||| ||||| |||||| |||||||||||||||||||| ||||||| |||| ||||||||||||  ||||||||||||||||||    
T  28869096 gtttggtaaaggttttttacaacgagtttatagtttatttcacgagcttataaattatttttaagaaattatttcaagtaacgtttgagcttatagctta 28868997  T
Q  445 t 445  Q
    |    
T  28868996 t 28868996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 369 - 445
Target Start/End: Original strand, 40887949 - 40888025
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||| |||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  40887949 agcttatagcttattttacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 40888025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 369 - 445
Target Start/End: Complemental strand, 49185246 - 49185170
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||  |||||||||||||||||||    
T  49185246 agcttatagcttatttcacaagcttataaactatttttcagaagctattccaagtaacgtttgagcttatagcttat 49185170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 50171366 - 50171282
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||||||||| |||| |||||||  ||||||||||||||||||    
T  50171366 ttaccatgagcttatagcttatttcacaagcttataagctatttttcagaagctattccaagtagcatttgagcttatagcttat 50171282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 3661013 - 3661095
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||| ||| |||| ||||||| |||||||||||||||||||    
T  3661013 accatgagcttatatcttatttcacgagcttataagctatttttcaaaagctattccaagtagcgtttgagcttatagcttat 3661095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 22098986 - 22099068
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||| |||||| |||||||| ||||| |||| ||||||| |||||||||||||||||||    
T  22098986 accatgagcttatagcttatttcacgagtttataagctattttttagaagctattccaagtagcgtttgagcttatagcttat 22099068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 32368406 - 32368324
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||| |||||||||||||||||||  |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  32368406 accatgagcttataacttatttcacgagcttatatgctatttttcagaagctattccaagtagcgtttgagcttatagcttat 32368324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 37703738 - 37703820
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||  ||||||||||||| |||||    
T  37703738 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtaacgtttgagcttataacttat 37703820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 469
Target Start/End: Complemental strand, 46056493 - 46056387
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    ||||||| ||||||| |||||||||||||||||||  ||||||||||| | ||||||||||||  ||| |||||||||||||| || |||| |||||| |    
T  46056493 accacgaacttatagtttatttcacgagcttataagatatttttcagacgctatttcaagtagcatttaagcttatagcttattatcttttgtttcattt 46056394  T
Q  463 ttaccct 469  Q
    |||||||    
T  46056393 ttaccct 46056387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 51423043 - 51422969
Alignment:
Q  371 cttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||| ||||||||||||||| ||||| |||| ||||||| |||||||||||||||||||    
T  51423043 cttatagcttatttcacgagtttataaactattttttagaagctattccaagtagcgtttgagcttatagcttat 51422969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 1507801 - 1507728
Alignment:
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||| |||||||||||||| |||| ||| ||| |||||||||||||||||||    
T  1507801 ttatagcttatttcacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttat 1507728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 5697550 - 5697627
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||||||| |||||||||||| | |||| ||||||| ||||||||||||| |||||    
T  5697550 gagcttatagcttatttcacgagcttataagctatttttcagacgctattccaagtagcgtttgagcttataccttat 5697627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 371 - 484
Target Start/End: Complemental strand, 49240340 - 49240227
Alignment:
Q  371 cttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||||||||| |||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||| |||    ||||| ||| |||||||||    
T  49240340 cttatagcttatttcatgagcttataagctatttttcagaagctatttcaaatagcgtttgagcttatagcttctcaaaagttcttccatttttaccctt 49240241  T
Q  471 gctattttctctaa 484  Q
      |||||| |||||    
T  49240240 aatattttatctaa 49240227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 371 - 445
Target Start/End: Original strand, 3391196 - 3391270
Alignment:
Q  371 cttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||| ||||||  |||| ||||||||||||||    
T  3391196 cttatagtttatttcacgagcttataaactatttttcagaagctattccaagtaacgtttaagcttatagcttat 3391270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 16085678 - 16085596
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||| |||||||  ||||| |||||||||||| |||||||||||| | |||||||||||| |||||||||||||||||||    
T  16085678 accacgatcttatagtctattttacgagcttataagctatttttcagatgctatttcaagtagcgtttgagcttatagcttat 16085596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 36043367 - 36043285
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||| ||||||||||||||||||| |||||||||||| | ||||  |||||| |||||||||||||||||||    
T  36043367 accatgagcttatagtttatttcacgagcttataagctatttttcagatgctattctaagtagcgtttgagcttatagcttat 36043285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 37672417 - 37672335
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||  ||||||||||||| |||||    
T  37672417 accatgagcttatagcttatttcacgagtttataagctatttttcagaagctattccaagtaacgtttgagcttataacttat 37672335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 42614202 - 42614120
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||| ||||||||||||| ||||||||| |||||||||||||| |||| ||||||| ||||||| |||||||||||    
T  42614202 accatgagcttctagcttatttcacaagcttataagctatttttcagaagctattccaagtagcgtttgaggttatagcttat 42614120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 8221366 - 8221220
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||||||||  ||||||||||||||||| ||||        ||| ||||||||| ||| | |||| ||||||||||||||||||||||||||||||||     
T  8221366 agcttatagcggatagcttataagctcgtctgacaaaaaaagctctgtttggtaacggttttttacaacgagcttatagcttatttcacgagcttataag 8221267  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||| ||  |||| ||| ||| ||||||  |||||||||||    
T  8221266 ctatttttcaaaaactattccaaatagcgtttgaatttatagcttat 8221220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 363 - 452
Target Start/End: Complemental strand, 30495262 - 30495173
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||| ||||||||||||||||||  ||| |||||| |||||||||||||| |||||||||||| |||| |||||||||||| ||| ||||    
T  30495262 accatgagcttatagcttatttctagagtttataagctatttttcagaagctatttcaagtagcgtttcagcttatagcttctcactttt 30495173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 364 - 445
Target Start/End: Complemental strand, 46088066 - 46087985
Alignment:
Q  364 ccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||| ||||||||||||| |||||| |||||||||||| |||||| |||||| | ||||||||| ||||||||    
T  46088066 ccacgagcttataacttatttcacgagtttataagctatttttcagacgttattccaagtaatatttgagcttgtagcttat 46087985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 365 - 445
Target Start/End: Complemental strand, 13570858 - 13570778
Alignment:
Q  365 cacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||| | |||| ||| ||| |||||| ||||||||||||    
T  13570858 cacgagcttatagcttatttcacgaacttataagctatttttcagacgctattccaaatagcgtttgaacttatagcttat 13570778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 46369875 - 46369954
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||   || |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  46369875 accatgagcttatagcttatttcacgagct---aagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 46369954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 365 - 447
Target Start/End: Complemental strand, 10628894 - 10628812
Alignment:
Q  365 cacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatca 447  Q
    ||||||||||||| |||||| || |||||||||  |||||||||||  ||||||||||||| ||||||||||||| |||||||    
T  10628894 cacgagcttatagtttattttactagcttataacttatttttcagacattatttcaagtagcgtttgagcttataacttatca 10628812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 368 - 470
Target Start/End: Original strand, 42963901 - 42964003
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacc 467  Q
    |||||||||  |||||| ||||| |||||| |||||||| ||||| |||||||||||| ||||||||||| |||||||  ||||||||| ||  ||||||    
T  42963901 gagcttataatttattttacgagtttataagctatttttgagaagctatttcaagtagcgtttgagcttacagcttattgttttttcttccacttttacc 42964000  T
Q  468 ctt 470  Q
    |||    
T  42964001 ctt 42964003  T

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Target: chr1; HSP #70
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 376 - 445
Target Start/End: Original strand, 33151975 - 33152044
Alignment:
Q  376 agcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||| |||||||| ||||| |||||||||||| |||||||||| || |||||    
T  33151975 agcttatttcacgagcttataagctatttttaagaagctatttcaagtagcgtttgagcttgtaacttat 33152044  T

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Target: chr1; HSP #71
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 41005051 - 41004978
Alignment:
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||| ||||||||||  ||||||| ||||| |||||||||||| |||||| ||||||||||||    
T  41005051 ttatagcttatttcatgagcttataagttatttttaagaagctatttcaagtagcgtttgaacttatagcttat 41004978  T

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Target: chr1; HSP #72
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 363 - 439
Target Start/End: Complemental strand, 9770040 - 9769964
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttata 439  Q
    |||| |||||||||||||||||||||||||||||| |||||||||| ||| |||| ||| ||  |||||||||||||    
T  9770040 accatgagcttatagcttatttcacgagcttataagctatttttcaaaagctattccaaataacgtttgagcttata 9769964  T

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Target: chr1; HSP #73
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 363 - 452
Target Start/End: Original strand, 28429097 - 28429180
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||      ||||||| |||||||| |||||||| ||| ||||    
T  28429097 accatgagcttatagcttatttcacgagcttataagctatttttcagaag------caagtagcgtttgagcgtatagcttctcactttt 28429180  T

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Target: chr1; HSP #74
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 39583164 - 39583246
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||| ||||||| ||||| |||||| |||||||||||||| |||| ||||||| ||||||| ||||| |||||    
T  39583164 accatgagcttataacttatttaacgagtttataagctatttttcagaagctattccaagtagcgtttgagtttataccttat 39583246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 46929043 - 46928969
Alignment:
Q  371 cttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||||||||||| |||||||||||||| ||||  || ||| ||||| |||||||||||||    
T  46929043 cttatagcttattttacgagcttataagctatttttcagaagctattctaattagcgtttgtgcttatagcttat 46928969  T

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Target: chr1; HSP #76
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 369 - 453
Target Start/End: Complemental strand, 2029037 - 2028953
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcatttttt 453  Q
    ||||||||| |||||| ||||| ||||||||||||||||||| | |||||||||||  |||| || ||||| |||||||| ||||    
T  2029037 agcttatagtttatttaacgagtttataaactatttttcagacgctatttcaagtaccgtttaagattataacttatcatctttt 2028953  T

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Target: chr1; HSP #77
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 388 - 452
Target Start/End: Original strand, 7024916 - 7024980
Alignment:
Q  388 gagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| ||||    
T  7024916 gagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttt 7024980  T

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Target: chr1; HSP #78
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 121 - 201
Target Start/End: Complemental strand, 7255214 - 7255134
Alignment:
Q  121 aaatatactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    ||||| |||||||  || ||||||| ||| ||| ||||||||||| | |||| ||||||||||||||||||||||||||||    
T  7255214 aaatacactccctccgttcctatatgtaagcacccttttattagagggaaaatgtgcttacatatagggacggagggagta 7255134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 382 - 470
Target Start/End: Original strand, 9169142 - 9169230
Alignment:
Q  382 tttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||| | ||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||  |||||||| ||  |||||||||    
T  9169142 tttcaccaacttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctccctttttcttccaattttaccctt 9169230  T

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Target: chr1; HSP #80
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 366 - 453
Target Start/End: Complemental strand, 31259641 - 31259554
Alignment:
Q  366 acgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcatttttt 453  Q
    |||||||||||| |||||||| |||||| ||   ||||||  | | |||||||||| ||| |||||||||||||||||||||||||||    
T  31259641 acgagcttatagtttatttcaggagcttttagcttattttctaaacgttatttcaaatagcgtttgagcttatagcttatcatttttt 31259554  T

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Target: chr1; HSP #81
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 36379204 - 36379131
Alignment:
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| |||||||| ||| ||||||  ||||||||| ||| |||| ||||||| |||||||||||||||||||    
T  36379204 ttatagtttatttcatgagtttataagttatttttcaaaagctattccaagtagcgtttgagcttatagcttat 36379131  T

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Target: chr1; HSP #82
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 444
Target Start/End: Complemental strand, 40935945 - 40935893
Alignment:
Q  392 ttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    ||||||||||||||||||||  |||| ||||||| ||||||||||||||||||    
T  40935945 ttataaactatttttcagaaactattccaagtagcgtttgagcttatagctta 40935893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 300 - 403
Target Start/End: Complemental strand, 33562026 - 33561922
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  33562026 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 33561927  T
Q  399 ctatt 403  Q
    |||||    
T  33561926 ctatt 33561922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 46836442 - 46836383
Alignment:
Q  136 gtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggag 195  Q
    |||||||||||||| ||| ||||||||||| | |||| ||||||||||||| ||||||||    
T  46836442 gtccctatatctaagcacccttttattagaggcaaaatgtgcttacatataaggacggag 46836383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 28429017 - 28429059
Alignment:
Q  272 agggtatgtttggtaagtccactaaatgagcttatagcttata 314  Q
    ||||| ||||||||||| |||||||||||||||||||||||||    
T  28429017 agggtctgtttggtaagcccactaaatgagcttatagcttata 28429059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 27659429 - 27659325
Alignment:
Q  366 acgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatcttta 465  Q
    |||| |||||| ||||||||| ||| |||||   |||||| || | | |||||||||||| ||||||||||||| |||||||| |||| | | || ||||    
T  27659429 acgaacttataacttatttcaggagtttatagtttattttccaaacgctatttcaagtagcgtttgagcttataacttatcatcttttatcttattttta 27659330  T
Q  466 ccctt 470  Q
    |||||    
T  27659329 ccctt 27659325  T

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Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 300 - 403
Target Start/End: Original strand, 2479164 - 2479268
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac-nnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | ||| || ||| ||||||||||||||||||||||||||     
T  2479164 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttatcatgagtttatagcttatttcacgagcttataag 2479263  T
Q  399 ctatt 403  Q
    |||||    
T  2479264 ctatt 2479268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 6814118 - 6814177
Alignment:
Q  386 acgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||  ||||||||||| | |||||||||||| ||||||||||||| |||||    
T  6814118 acgaacttataagttatttttcagacgctatttcaagtagcgtttgagcttataacttat 6814177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 333
Target Start/End: Original strand, 46369808 - 46369842
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgac 333  Q
    |||||| ||||||||||||||||||||||||||||    
T  46369808 gagcttttagcttatagcttataagctcgtttgac 46369842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 17046733 - 17046766
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  17046733 agcttttagcttatagcttataagctcgtttgac 17046766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 26843755 - 26843788
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  26843755 agcttttagcttatagcttataagctcgtttgac 26843788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 31150556 - 31150523
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  31150556 agcttttagcttatagcttataagctcgtttgac 31150523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 36838826 - 36838793
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  36838826 agcttttagcttatagcttataagctcgtttgac 36838793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 42966422 - 42966361
Alignment:
Q  126 tactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatag 187  Q
    |||||||| ||||||||||||||| ||| ||||||| ||| | |||| ||||||| ||||||    
T  42966422 tactccctctgtccctatatctaagcactcttttatcagatgcaaaaggtgcttatatatag 42966361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 6380162 - 6380226
Alignment:
Q  137 tccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    ||||||||||||| ||| |||||||||||   |||| |||||||| || ||| ||||||||||||    
T  6380162 tccctatatctaagcacccttttattagagacaaaaggtgcttacctagaggaacggagggagta 6380226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 9894931 - 9894987
Alignment:
Q  389 agcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||| |||||||||||| | ||||  |||||| |||||||||||||| ||||    
T  9894931 agcttataagctatttttcagacgctattcaaagtagcgtttgagcttatagtttat 9894987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 24679109 - 24679173
Alignment:
Q  141 tatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagtaagtt 205  Q
    ||||| ||| ||| ||||||||| | | ||| |||| |||||| |||||||||||||||||||||    
T  24679109 tatatttaagcacccttttattaaagggaaagagtgtttacatttagggacggagggagtaagtt 24679173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 300 - 332
Target Start/End: Original strand, 26204278 - 26204310
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttga 332  Q
    ||||| |||||||||||||||||||||||||||    
T  26204278 agcttttagcttatagcttataagctcgtttga 26204310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 28681091 - 28681151
Alignment:
Q  136 gtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagg 196  Q
    |||| |||||||||||||| |||||||||||| ||| |||  |||||||||| || |||||    
T  28681091 gtccttatatctaaacacatttttattagaagcaaagagtatttacatatagagatggagg 28681151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 106)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 300 - 470
Target Start/End: Original strand, 8872874 - 8873045
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||  ||||||||||  | | | |||| ||||||||||||||||||||||||||||||     
T  8872874 agcttttagcttatagcttataagctcgtttgacaaaaaaagctatgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataag 8872973  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||||||| |||||||||||| ||||||||||||||||| ||| |||||||||||  |||||||||    
T  8872974 ctatttttcagaagctatttcaagtagcgtttgagcttatagcttctcactttttctttcaattttaccctt 8873045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 271 - 470
Target Start/End: Original strand, 193369 - 193569
Alignment:
Q  271 tagggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacga 369  Q
    |||||| ||||||||||| |||   ||||||||||||||||||||||||||||||||||||||        ||| |||||||||   | | |||| ||||    
T  193369 tagggtctgtttggtaagcccatctaatgagcttatagcttatagcttataagctcgtttgacaaaaatagctctgtttggtaacaattttttacaacga 193468  T
Q  370 gcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccct 469  Q
    ||||||||||||||| | |||||||||| |||||||||||| | |||| ||||||| |||||||||||||||||||||| |||| || ||| | ||||||    
T  193469 gcttatagcttattttatgagcttataagctatttttcagatgctattacaagtagcgtttgagcttatagcttatcatgttttattccatttataccct 193568  T
Q  470 t 470  Q
    |    
T  193569 t 193569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 299 - 470
Target Start/End: Complemental strand, 37714117 - 37713945
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttga-cnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||| |||||||||||||||||||||||||||         ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||    
T  37714117 gagcttttagcttatagcttataagctcgtttgataaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 37714018  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
     ||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||||||||  |||||||||    
T  37714017 gctatttttcagaagttattccaagtagcgtttgagcttatagcttctcactttttctttcaattttaccctt 37713945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 272 - 445
Target Start/End: Complemental strand, 44947380 - 44947206
Alignment:
Q  272 agggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctctt-accacga 369  Q
    ||||| ||||||||||  |||  ||| ||||||||||||||||||||||||||||||||||         ||| |||||||| || ||| || |||||||    
T  44947380 agggtctgtttggtaaagccatcaaacgagcttatagcttatagcttataagctcgtttgataaaaaaagctctgtttggtactg-tcttttcaccacga 44947282  T
Q  370 gcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||||    
T  44947281 gcttatagcttatttcacgagcttataagctatttttcagaagctattccaagcagtgtttgagcttatagcttat 44947206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 361 - 478
Target Start/End: Complemental strand, 52868268 - 52868151
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcat 460  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| |||||  ||||||||| ||     
T  52868268 ttaccatgagcttatagcttatttcacgagcttataagctatttttgagaagctatttcaagtagtgtttgagcttataacttattgttttttcttccac 52868169  T
Q  461 ctttacccttgctatttt 478  Q
     |||||||||| ||||||    
T  52868168 ttttacccttgttatttt 52868151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 299 - 456
Target Start/End: Original strand, 48942991 - 48943147
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    |||||| ||||||||||||||||||||||||||||        || |||||||||   | | |||||| ||||||||||||||||||||||||||||||     
T  48942991 gagcttttagcttatagcttataagctcgtttgacaaaaaaa-tctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataag 48943089  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctt 456  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||| ||| ||||||||    
T  48943090 ctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttctt 48943147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 300 - 470
Target Start/End: Original strand, 42217664 - 42217835
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    |||||||||||||||||||||||||||||||||         ||| ||||||||||  | | | |||| ||||||||||||||||||||||||||||||     
T  42217664 agcttatagcttatagcttataagctcgtttgataaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataag 42217763  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||||||| |||| ||||||  ||||||||||||||||| |||| |||| | |||| |||||||||    
T  42217764 ctatttttcagaagctattccaagtaacgtttgagcttatagcttctcatattttatctcatttttaccctt 42217835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 51003312 - 51003394
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||    
T  51003312 accacgagcttatagcttatttcacgagcttataagctatttttcagacgttatttcaagtagcgtttgagcttatagcttat 51003394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 37088285 - 37088431
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| ||||||||||  | | | |||| ||||||||||||||||||||||||||||||     
T  37088285 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagcttataag 37088384  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  37088385 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 37088431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 45345159 - 45345013
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  45345159 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 45345060  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  45345059 ctatttttcagaagttattccaagtagcgtttgagcttatagcttat 45345013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 37490011 - 37489904
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||   |||| ||||||| ||||||||||||||||| |||||||||||| ||| |    
T  37490011 accacgagcttatagcttatttcacgagcttataagctatttttcagacactattccaagtagcgtttgagcttatagcttctcattttttcttccattt 37489912  T
Q  463 ttaccctt 470  Q
    | ||||||    
T  37489911 taaccctt 37489904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 44748873 - 44748766
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |    
T  44748873 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaatt 44748774  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  44748773 ttaccctt 44748766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 46972098 - 46972180
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  46972098 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 46972180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 49853130 - 49853048
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||    
T  49853130 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctatttcaagtagcgtttgagcttatagcttat 49853048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 53779096 - 53779178
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  53779096 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagtgtttgagcttatagcttat 53779178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 16127290 - 16127144
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  16127290 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 16127191  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  16127190 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 16127144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 19948469 - 19948323
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| |||||||||| |||||||||||||||||        ||| |||||||||   | | |||||| ||||||||||||||||||||||||||||||     
T  19948469 agcttctagcttatagtttataagctcgtttgacaaaaaaagctctgtttggtaacacttttttaccatgagcttatagcttatttcacgagcttataag 19948370  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  19948369 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 19948323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 29081432 - 29081286
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  29081432 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 29081333  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  29081332 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 29081286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 35499602 - 35499748
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  35499602 agcttttagcttatagcttataagctcgtttgacaaaaaaatctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 35499701  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  35499702 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 35499748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 40563514 - 40563368
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  40563514 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 40563415  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  40563414 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 40563368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 363 - 456
Target Start/End: Original strand, 43525808 - 43525901
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctt 456  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| ||||||||    
T  43525808 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttctt 43525901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 44845625 - 44845771
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  44845625 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 44845724  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  44845725 ctatttttcagaagctattccaagtagcgtttgagcttatagcttat 44845771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 306 - 470
Target Start/End: Complemental strand, 46248109 - 46247944
Alignment:
Q  306 tagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactattt 404  Q
    ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| |||||||||||||||||||||||||||||| ||||||    
T  46248109 tagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 46248010  T
Q  405 ttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||| |||| ||||||  ||||||||||||||||| ||| |||||||| ||  |||||||||    
T  46248009 ttcagaagctattccaagtaacgtttgagcttatagcttctcactttttcttccaattttaccctt 46247944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 273 - 445
Target Start/End: Original strand, 52225259 - 52225432
Alignment:
Q  273 gggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgacnnnnnnnctcc-gtttggtaatggtctcttaccacgagc 371  Q
    |||| |||||||||||  ||  |||||||||||||||| ||||||||||||||||||||||        | | |||||||||   | | |||||| ||||    
T  52225259 gggtctgtttggtaagatcagaaaatgagcttatagctcatagcttataagctcgtttgacaacaaaagttctgtttggtaacacttttttaccatgagc 52225358  T
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||| |||||| |||||||||||||| ||||  |||||| |||||||||||||||||||    
T  52225359 ttatagcttatttcacgagtttataagctatttttcagaagctattcaaagtagcgtttgagcttatagcttat 52225432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 306 - 445
Target Start/End: Complemental strand, 37528868 - 37528728
Alignment:
Q  306 tagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactattt 404  Q
    ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| |||||||||||||||||||||||||||||| ||||||    
T  37528868 tagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataagctattt 37528769  T
Q  405 ttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||| |||| ||||||| |||||||||||||||||||    
T  37528768 ttcagaagctattccaagtagcgtttgagcttatagcttat 37528728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 40480108 - 40480001
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| ||||||||||||||||| |||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |    
T  40480108 accatgagcttatagcttattttacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaatt 40480009  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  40480008 ttaccctt 40480001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 54542022 - 54541915
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||  || ||| |||||||| ||  |    
T  54542022 accatgagcttatagcttatttcacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttataatttctcactttttcttccaatt 54541923  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  54541922 ttaccctt 54541915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 2121892 - 2121974
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  2121892 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2121974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 2580014 - 2579932
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  2580014 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2579932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 4240343 - 4240425
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  4240343 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 4240425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 24536641 - 24536559
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  24536641 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 24536559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 28676977 - 28676895
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  28676977 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 28676895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 47897693 - 47897611
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  47897693 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 47897611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 299 - 445
Target Start/End: Original strand, 52794895 - 52795042
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | |  ||| ||||||||||||||||||||||||||||||    
T  52794895 gagcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttccccatgagcttatagcttatttcacgagcttataa 52794994  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  52794995 gctatttttcagaagctattccaagtagcgtttgagcttatagcttat 52795042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 26540961 - 26541107
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  26540961 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 26541060  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| ||||||||||| |||||||    
T  26541061 ctatttttcagaagctattccaagtagcgtttgagcttacagcttat 26541107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 368 - 445
Target Start/End: Complemental strand, 29718283 - 29718206
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  29718283 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 29718206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 38185771 - 38185917
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  38185771 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 38185870  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| |||||| ||||||||||||    
T  38185871 ctatttttcagaagctattccaagtagcgtttgaacttatagcttat 38185917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 363 - 452
Target Start/End: Original strand, 41246314 - 41246403
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| ||||    
T  41246314 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttt 41246403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 41518431 - 41518508
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||    
T  41518431 gagcttatagcttatttcaagagcttataaactatttttcagaagctacttcaagtagcgtttgagcttatagcttat 41518508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 45368611 - 45368757
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||||||||| ||||||||||||||||| ||||        ||| ||||||||| | | | |||| || |||||||||||||||||| ||||||||||     
T  45368611 agcttatagctgatagcttataagctcgtctgacaaaaaaagctctgtttggtaacgcttttttacaacaagcttatagcttatttcaggagcttataag 45368710  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| || ||||||||| |||||||||||||||||||    
T  45368711 ctatttttcagaagctacttcaagtagcgtttgagcttatagcttat 45368757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 363 - 452
Target Start/End: Complemental strand, 46318846 - 46318757
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| ||||    
T  46318846 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttt 46318757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 345 - 445
Target Start/End: Complemental strand, 29203132 - 29203032
Alignment:
Q  345 gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    ||||||||| ||| | |||| |||||||||||| ||||||||||||||||||| |||||||||||| | ||||||||||||  |||||||||||||||||    
T  29203132 gtttggtaacggttttttacaacgagcttatagtttatttcacgagcttataagctatttttcagacgctatttcaagtagcatttgagcttatagctta 29203033  T
Q  445 t 445  Q
    |    
T  29203032 t 29203032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 369 - 445
Target Start/End: Original strand, 30864497 - 30864573
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  30864497 agcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 30864573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 368 - 452
Target Start/End: Original strand, 39876684 - 39876768
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| ||||    
T  39876684 gagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttt 39876768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 363 - 470
Target Start/End: Original strand, 21707216 - 21707323
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| ||| |||||||||||||||||||||||||| |||||||||||||| |||| |||||||  |||||||||||||||| ||| |||||||| ||  |    
T  21707216 accatgagattatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcttttgagcttatagcttctcactttttcttccaatt 21707315  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  21707316 ttaccctt 21707323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 361 - 444
Target Start/End: Original strand, 30548807 - 30548890
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||||||||| |||| ||||||| ||||||||||||||||||    
T  30548807 ttaccatgagcttatagcttatttcacgagtttataagctatttttcagaagctattccaagtagcgtttgagcttatagctta 30548890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 312 - 470
Target Start/End: Original strand, 2598608 - 2598767
Alignment:
Q  312 atagcttataagctcgtttga-cnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcaga 410  Q
    ||||||||||||||||||||| |       ||| ||||||||||| | | | ||||| | ||||||||||||||||| ||||||||| ||||||||||||    
T  2598608 atagcttataagctcgtttgatcaaaaaaactctgtttggtaatgttttttcaccacaaacttatagcttatttcacaagcttataagctatttttcaga 2598707  T
Q  411 agttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    ||||||| ||||||| ||||||||||||| ||||| || |||| ||  || |||||||||    
T  2598708 agttattccaagtagcgtttgagcttataacttatgatcttttattctatttttaccctt 2598767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 2851882 - 2851964
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||| |||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  2851882 accatgagcttatagcttatttcatgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 2851964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 21603863 - 21603945
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||| |||| ||||||| |||||||||||||||||||    
T  21603863 accatgagcttatagcttatttcacgagcttataagctacttttcagaagctattccaagtagcgtttgagcttatagcttat 21603945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 50317116 - 50317034
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||| ||||| |||| ||||||| |||||||||||||||||||    
T  50317116 accatgagcttatagcttatttcacgagcttataagctattttttagaagctattccaagtagcgtttgagcttatagcttat 50317034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 52166177 - 52166095
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||  ||||||||||||||||||    
T  52166177 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcatttgagcttatagcttat 52166095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 52857961 - 52858043
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||  |||||||||||||||||||    
T  52857961 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtatcgtttgagcttatagcttat 52858043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 54672267 - 54672185
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||| |||||    
T  54672267 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttataccttat 54672185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 299 - 445
Target Start/End: Complemental strand, 55305261 - 55305114
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgac-nnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||| ||||||||||||||||||||||||||||         || |||||||||   | | | |||| ||||||||||||||||||||||||||||||    
T  55305261 gagcttttagcttatagcttataagctcgtttgacaaaaaaagttctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataa 55305162  T
Q  398 actatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     |||||||||||||  |||| ||||||| |||||||||||||||||||    
T  55305161 gctatttttcagaaactattccaagtagcgtttgagcttatagcttat 55305114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 25570380 - 25570526
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| |||||||||||||||||||| |||||||||     
T  25570380 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacaagcttataag 25570479  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||| ||||| |||| ||||||| |||||||||||||||||||    
T  25570480 ctattttttagaagctattccaagtagcgtttgagcttatagcttat 25570526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 363 - 456
Target Start/End: Complemental strand, 33897980 - 33897887
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctt 456  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||| | |||| ||| ||| |||||| |||||| ||||||||||||||||    
T  33897980 accacgagcttatagcttatttcacaagcttataagctatttttcagacgctattccaaatagcgtttgaacttataacttatcattttttctt 33897887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 42497064 - 42497141
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  42497064 gagcttataacttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 42497141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 365 - 445
Target Start/End: Complemental strand, 45693471 - 45693391
Alignment:
Q  365 cacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  45693471 cacgaacttatagcttatttcacgaacttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 45693391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 363 - 443
Target Start/End: Original strand, 48378291 - 48378371
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctt 443  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||    
T  48378291 accacgagtctatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagctt 48378371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 369 - 445
Target Start/End: Original strand, 50499833 - 50499909
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||| ||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  50499833 agcttatagtttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 50499909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 46627584 - 46627502
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||||| |||||| ||| |||||||||| |||| ||||||| |||||||||||||||||||    
T  46627584 accatgagcttatagcttatttcacgaggttataagctaattttcagaagctattccaagtagcgtttgagcttatagcttat 46627502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 51709076 - 51709158
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||||  |||| ||||||| |||||||||||||||||||    
T  51709076 accatgagcttataacttatttcacgagcttataagctatttttcagaaactattccaagtagcgtttgagcttatagcttat 51709158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 7041124 - 7041208
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||||||| |||||||||| |||||||||||||| || ||||||||| |||| ||||||||| ||||    
T  7041124 ttacaacgagcttatagcttatttcaggagcttataagctatttttcagaagctacttcaagtagcgtttaagcttatagtttat 7041208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 369 - 445
Target Start/End: Complemental strand, 12063809 - 12063733
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||||||||||||| |||||||||||||  |||| ||||||| ||||||||||||| |||||    
T  12063809 agcttatagcttatttcacgagcttataagctatttttcagaaactattccaagtagcgtttgagcttatatcttat 12063733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 345 - 445
Target Start/End: Complemental strand, 32026514 - 32026414
Alignment:
Q  345 gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    ||||| ||||||| | | ||||||||||||||| ||||||||| ||||||||| |||||||||||| | |||| ||||||| ||||||||||||| ||||    
T  32026514 gtttgataatggtttttcaccacgagcttatagtttatttcacaagcttataagctatttttcagatgctattccaagtagcgtttgagcttataactta 32026415  T
Q  445 t 445  Q
    |    
T  32026414 t 32026414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 33391968 - 33392050
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||| |||||||| |||||||||| |||||||||||||| |||| ||||||| ||||||||||||| |||||    
T  33391968 accatgagcttatagtttatttcatgagcttataagctatttttcagaagctattccaagtagcgtttgagcttataacttat 33392050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 361 - 439
Target Start/End: Complemental strand, 37713229 - 37713151
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttata 439  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||| ||||||||||  |||||| |||||||||||||    
T  37713229 ttacaacgagcttatagtttattttacgagcttataaactatttttaagaagttattctaagtagcgtttgagcttata 37713151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 38892073 - 38891991
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||| ||||| |||||||||||||  |||| |||||||  ||||||||||||||||||    
T  38892073 accatgagcttatagcttatttcacgagcctataagctatttttcagaaactattccaagtagcatttgagcttatagcttat 38891991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 298 - 499
Target Start/End: Original strand, 39719353 - 39719554
Alignment:
Q  298 tgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttata 396  Q
    |||| |||||||||||||||||||||||||||||||        ||| ||||| ||| | | | |||| || ||||||||||||||||||||||||||||    
T  39719353 tgagtttatagcttatagcttataagctcgtttgacaaaaaaagctctgtttgataacgtttt-ttacaacaagcttatagcttatttcacgagcttata 39719451  T
Q  397 aactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacccttgctattttctctaataaccaattcta 496  Q
    |  |||| |  ||||| |||| ||| ||| ||||||| ||||||||| | || ||||||| ||| |||||||||  |||||| ||||| | |||||| ||    
T  39719452 agttattatgaagaagctattccaaatagcgtttgagtttatagctttttatcttttcttccatttttacccttattattttatctaaaatccaatttta 39719551  T
Q  497 ccc 499  Q
    |||    
T  39719552 ccc 39719554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 306 - 445
Target Start/End: Complemental strand, 24628344 - 24628204
Alignment:
Q  306 tagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactattt 404  Q
    ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||| |||||||||| ||||||    
T  24628344 tagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacattttttcaccatgagcttatagcttatttcatgagcttataagctattt 24628245  T
Q  405 ttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||| |||| ||||||   ||||| ||||||||||||    
T  24628244 ttcagaagctattccaagtaacatttgaacttatagcttat 24628204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 345 - 484
Target Start/End: Complemental strand, 52595439 - 52595300
Alignment:
Q  345 gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctta 444  Q
    ||||||||||| | | | |||| ||| |||||||||||||||| || |||||| |||||||||||||| |||| ||||||| ||| ||||||||| |||     
T  52595439 gtttggtaatgttttttcaccatgagtttatagcttatttcacaagattataagctatttttcagaagctattccaagtagcgttggagcttataacttc 52595340  T
Q  445 tcattttttctttcatctttacccttgctattttctctaa 484  Q
    |||   |||||| ||| |||||||||  |||||| |||||    
T  52595339 tcaaaatttcttccatttttacccttaatattttatctaa 52595300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 271 - 333
Target Start/End: Complemental strand, 31558378 - 31558316
Alignment:
Q  271 tagggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgac 333  Q
    |||||| ||||||||||| |||||||||||||||  |||||||||||||||||||||||||||    
T  31558378 tagggtctgtttggtaagcccactaaatgagctttgagcttatagcttataagctcgtttgac 31558316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 368 - 445
Target Start/End: Complemental strand, 42465109 - 42465032
Alignment:
Q  368 gagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||||||||| || |||||| |||||||||||||| ||||  |||||| ||||||| |||||||||||    
T  42465109 gagcttatagcttatttcacaagtttataagctatttttcagaagctattctaagtagcgtttgagattatagcttat 42465032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 2187374 - 2187314
Alignment:
Q  273 gggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgac 333  Q
    |||| ||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||    
T  2187374 gggtctgtttggtaagcccactaaatgagcttttagcttatagcctataagctcgtttgac 2187314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 363 - 417
Target Start/End: Original strand, 47173633 - 47173687
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatt 417  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  47173633 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctatt 47173687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 272 - 333
Target Start/End: Original strand, 5505824 - 5505885
Alignment:
Q  272 agggtatgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||| |||   ||||||||||||||||||||||||||||||||||||||    
T  5505824 agggtctgtttggtaagcccatctaatgagcttatagcttatagcttataagctcgtttgac 5505885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 376 - 441
Target Start/End: Complemental strand, 32982986 - 32982921
Alignment:
Q  376 agcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagc 441  Q
    ||||||||| |||||||||||| ||||||||| |||| ||||||||||| || |||||||||||||    
T  32982986 agcttattttacgagcttataagctatttttcggaagctatttcaagtaatgcttgagcttatagc 32982921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 389 - 470
Target Start/End: Complemental strand, 52931206 - 52931125
Alignment:
Q  389 agcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    |||||||||  ||||||||||||| |||| ||||||| |||| |||||||||||| ||| |||||||||||  |||||||||    
T  52931206 agcttataagttatttttcagaagctattccaagtagcgtttaagcttatagcttctcactttttctttcaattttaccctt 52931125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 373 - 445
Target Start/End: Original strand, 5506704 - 5506776
Alignment:
Q  373 tatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||| | |||||||||| ||||||||||||   |||| ||||||| |||||||||||||||||||    
T  5506704 tatagcttattttatgagcttataagctatttttcagatactattacaagtagcgtttgagcttatagcttat 5506776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 363 - 452
Target Start/End: Original strand, 35100254 - 35100335
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||| ||||||||||||||||||||||||         |||||||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  35100254 accatgagcttatagcttatttcacgagcc--------atttttcagaagctattccaagtagcgtttgagcttatagcttatcattttt 35100335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 42380626 - 42380551
Alignment:
Q  126 tactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    ||||||||  ||||||||||||||| || ||||||||||| | |||  ||||||||||||||||||||| ||||||    
T  42380626 tactccctccgtccctatatctaaaaacccttttattagaggcaaagggtgcttacatatagggacggatggagta 42380551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 42409340 - 42409265
Alignment:
Q  126 tactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    ||||||||  ||||||||||||||| || ||||||||||| | |||  ||||||||||||||||||||| ||||||    
T  42409340 tactccctccgtccctatatctaaaaacccttttattagaggcaaagggtgcttacatatagggacggatggagta 42409265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 363 - 433
Target Start/End: Complemental strand, 24350352 - 24350282
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgag 433  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||| | | |||||| ||| |||||||    
T  24350352 accacgagcttatagtttatttcacgagtttataaattatttttcagacgctgtttcaattagcgtttgag 24350282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 20450532 - 20450605
Alignment:
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||| ||||||||||||||||||||  ||||||||||| | |||| ||||||| ||||| ||||||| |||||    
T  20450532 ttataacttatttcacgagcttataagttatttttcagacgctattgcaagtagcgtttgtgcttataacttat 20450605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 27446501 - 27446574
Alignment:
Q  372 ttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||||||||||||||||||| |||||  |||||||||||||| |||||||| ||| || |||| ||||| |||||    
T  27446501 ttatagcttatttcacgagtttatatgctatttttcagaagctatttcaaatagcgtctgagtttataacttat 27446574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 363 - 452
Target Start/End: Complemental strand, 30814337 - 30814248
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||| ||||||||||||||||||||||| ||||||  |||||||| |||  |||| ||||||| |||||| |||||| ||| ||| ||||    
T  30814337 accatgagcttatagcttatttcacgagtttataagatatttttcggaaactattccaagtagcgtttgaacttataacttttcactttt 30814248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 366 - 445
Target Start/End: Original strand, 22257721 - 22257800
Alignment:
Q  366 acgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||  |||||||    ||||||||| | | |||||||||||| |||||||||||||||||||    
T  22257721 acgaccttatagcttatttcataagcttattgcttatttttcaaatgctatttcaagtagcgtttgagcttatagcttat 22257800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 365 - 452
Target Start/End: Original strand, 25146380 - 25146467
Alignment:
Q  365 cacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||||||||||| |||||||||| | |||||||  |||||||| || | |||||||||||  |||||| |||||| ||||| ||||||    
T  25146380 cacgagcttataacttatttcaccaacttataacttatttttctgacgctatttcaagtaacgtttgaacttataacttataattttt 25146467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 361 - 431
Target Start/End: Complemental strand, 9338855 - 9338785
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttg 431  Q
    |||| |||||||||||||||||||||  |||||||||  ||||||| | | | ||||||||||||||||||    
T  9338855 ttacaacgagcttatagcttatttcataagcttataacttattttttaaatgctatttcaagtagtgtttg 9338785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 384 - 484
Target Start/End: Original strand, 37973197 - 37973296
Alignment:
Q  384 tcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttacccttgctattttctcta 483  Q
    |||||||||||||   ||||||||| ||| ||||| || || ||||||||||||||| |||| ||| |||||||||  |||||||||  | |||||||||    
T  37973197 tcacgagcttatagcttatttttcaaaagctatttaaa-taatgtttgagcttatagtttataattatttctttcaattttaccctttttgttttctcta 37973295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 299 - 403
Target Start/End: Original strand, 39469913 - 39470018
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttga-cnnnnnnnctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataa 397  Q
    |||||| ||||||||||||||||||||||||||| |       ||| |||||||||   | | | |||| |||||||||||||||||||| |||||||||    
T  39469913 gagcttttagcttatagcttataagctcgtttgaccaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacaagcttataa 39470012  T
Q  398 actatt 403  Q
     |||||    
T  39470013 gctatt 39470018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 39719349 - 39719301
Alignment:
Q  278 tgtttggtaagtccactaaatgagcttatagcttatagcttataagctc 326  Q
    ||||| |||||  |||||||| |||||||||||||||||||||||||||    
T  39719349 tgttttgtaagctcactaaataagcttatagcttatagcttataagctc 39719301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 484
Target Start/End: Original strand, 41538407 - 41538497
Alignment:
Q  400 tatttttcagaagttatttcaagtagtgtttgag------cttatagcttatcattttttctttcatctttacccttgctattttctctaa 484  Q
    |||||| |||| ||||||||||||||||||||||      ||| ||||||||||||||||||| ||  |||||||||  |||||| |||||    
T  41538407 tattttccagacgttatttcaagtagtgtttgagctttaacttgtagcttatcattttttcttccaattttacccttattattttatctaa 41538497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 333
Target Start/End: Original strand, 52788676 - 52788710
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgac 333  Q
    |||||| ||||||||||||||||||||||||||||    
T  52788676 gagcttttagcttatagcttataagctcgtttgac 52788710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 299 - 333
Target Start/End: Complemental strand, 54542087 - 54542053
Alignment:
Q  299 gagcttatagcttatagcttataagctcgtttgac 333  Q
    |||||| ||||||||||||||||||||||||||||    
T  54542087 gagcttttagcttatagcttataagctcgtttgac 54542053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 445
Target Start/End: Original strand, 612098 - 612199
Alignment:
Q  344 cgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagctt 443  Q
    |||||||||| | | | |||| |||||||||||| || ||| |  |||||||||  |||||| || | |  ||||||||||| |||||||||||||||||    
T  612098 cgtttggtaacgattttttacaacgagcttatagtttcttttagaagcttataacttattttccatacgccatttcaagtagcgtttgagcttatagctt 612197  T
Q  444 at 445  Q
    ||    
T  612198 at 612199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 30814401 - 30814368
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||||||||||||||||| ||||||||||||||    
T  30814401 agcttatagcttatagcttttaagctcgtttgac 30814368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 33896663 - 33896728
Alignment:
Q  136 gtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    |||||||||| ||| ||| |||| |||||| | |||  ||| ||||||||||||||||||||||||    
T  33896663 gtccctatatataagcaccctttcattagaggcaaatggtgtttacatatagggacggagggagta 33896728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 40480172 - 40480139
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  40480172 agcttttagcttatagcttataagctcgtttgac 40480139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 44545231 - 44545264
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  44545231 agcttttagcttatagcttataagctcgtttgac 44545264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 400 - 452
Target Start/End: Original strand, 4835762 - 4835814
Alignment:
Q  400 tatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    ||||||| |||||||||||||| |||||| ||||||||||  |||| ||||||    
T  4835762 tattttttagaagttatttcaaatagtgtatgagcttataatttattattttt 4835814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 300 - 332
Target Start/End: Complemental strand, 28677041 - 28677009
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttga 332  Q
    ||||| |||||||||||||||||||||||||||    
T  28677041 agcttttagcttatagcttataagctcgtttga 28677009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 42380797 - 42380729
Alignment:
Q  126 tactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacgga 194  Q
    |||||||| |||||||||||||||  || ||||||||||| | |||   |||||||||||||| |||||    
T  42380797 tactccctctgtccctatatctaataacccttttattagaggcaaaggatgcttacatataggaacgga 42380729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 42409511 - 42409443
Alignment:
Q  126 tactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacgga 194  Q
    |||||||| |||||||||||||||  || ||||||||||| | |||   |||||||||||||| |||||    
T  42409511 tactccctctgtccctatatctaataacccttttattagaggcaaaggatgcttacatataggaacgga 42409443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 363 - 403
Target Start/End: Complemental strand, 43740365 - 43740325
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatt 403  Q
    |||| ||| |||||||||||||||||||||||||| |||||    
T  43740365 accatgagtttatagcttatttcacgagcttataagctatt 43740325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 371 - 403
Target Start/End: Original strand, 44545303 - 44545335
Alignment:
Q  371 cttatagcttatttcacgagcttataaactatt 403  Q
    ||||||||||||||||||||||||||| |||||    
T  44545303 cttatagcttatttcacgagcttataagctatt 44545335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 369 - 470
Target Start/End: Original strand, 4562 - 4663
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccc 468  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||| | |||| |||||||    
T  4562 agcttataacttatttcacgagcttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttctcattttttgtctcatttttaccc 4661  T
Q  469 tt 470  Q
    ||    
T  4662 tt 4663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 68; Significance: 5e-30; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 30259 - 30152
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||| ||||||||||||||||| |||  ||||||||||  |    
T  30259 accatgagcttatagcttatttcacgagtttataagctatttttcagaagttattccaagtagcgtttgagcttatagcttctcacattttctttcaatt 30160  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  30159 ttaccctt 30152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 382 - 445
Target Start/End: Complemental strand, 28139 - 28076
Alignment:
Q  382 tttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| ||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  28139 tttcacaagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 28076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 8e-29; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 296 - 445
Target Start/End: Original strand, 192009 - 192159
Alignment:
Q  296 aatgagcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagctta 394  Q
    ||||||||||||||||||||||||||||||||| ||||        ||| ||||||||||  | | | |||| |||||||||||||||||||||||||||    
T  192009 aatgagcttatagcttatagcttataagctcgtatgacaaaaaaagctctgtttggtaatactttttcaccatgagcttatagcttatttcacgagctta 192108  T
Q  395 taaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    ||| |||||||| ||||| |||| |||||||  ||||||||||||||||||    
T  192109 taagctatttttgagaagctattccaagtagcttttgagcttatagcttat 192159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 143350 - 143427
Alignment:
Q  125 atactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagtaa 202  Q
    ||||| ||| ||||||||||| ||||||| ||||||||||| | |||   ||||||||||||||||||||||||||||    
T  143350 atacttcctctgtccctatatgtaaacacccttttattagaggcaaaggatgcttacatatagggacggagggagtaa 143427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 7119 - 7203
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||    
T  7119 ttaccatgagcttatagcttatttcacgagcttataagctattttttagaagctattccaagtagtgtttgagcttatagcttat 7203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 53103 - 52996
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatct 462  Q
    |||| ||||||||||| |||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||  |    
T  53103 accatgagcttatagcctatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaatt 53004  T
Q  463 ttaccctt 470  Q
    ||||||||    
T  53003 ttaccctt 52996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1632 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold1632
Description:

Target: scaffold1632; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 119 - 37
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  119 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 37  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Original strand, 22595 - 22741
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  22595 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 22694  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
     ||||||||||||| |||| ||||||| |||||||||||||||||||    
T  22695 ttatttttcagaagctattccaagtagcgtttgagcttatagcttat 22741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 300 - 445
Target Start/End: Complemental strand, 126906 - 126760
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgacnnnnnnn-ctccgtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaa 398  Q
    ||||| ||||||||||||||||||||||||||||        ||| |||||||||   | | | |||| ||||||||||||||||||||||||||||||     
T  126906 agcttttagcttatagcttataagctcgtttgacaaaaaaagctctgtttggtaacactttttcaccatgagcttatagcttatttcacgagcttataag 126807  T
Q  399 ctatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||||||| |||| ||||||| | |||||||||||||||||    
T  126806 ctatttttcagaagctattccaagtagcgcttgagcttatagcttat 126760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 63908 - 63990
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| ||||  |||||| |||||||||||||||||||    
T  63908 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattctaagtagcgtttgagcttatagcttat 63990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 59; Significance: 1e-24; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 431322 - 431404
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||| ||| |||||||||||||||||||    
T  431322 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctattccaaatagcgtttgagcttatagcttat 431404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 119323 - 119239
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||   |||| ||||||| |||||||||||||||||||    
T  119323 ttacaacgagcttatagcttatttcacgagcttataagctatttttcagatcctattccaagtagagtttgagcttatagcttat 119239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 92078 - 92001
Alignment:
Q  123 atatactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    ||||||| ||||||||||||| | ||| ||| ||| ||||||| | |||| ||||||||||||||||||||||||||||    
T  92078 atatacttcctttgtccctat-tgtaagcacccttctattagatgcaaaaggtgcttacatatagggacggagggagta 92001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 361 - 470
Target Start/End: Original strand, 5471 - 5579
Alignment:
Q  361 ttaccacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcat 460  Q
    |||||| ||||||||| ||||||||||||||||||||  ||||||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||| ||     
T  5471 ttaccatgagcttata-cttatttcacgagcttataagttatttttcagaagctattccaagtagcgtttgagcttatagcttctcactttttcttccaa 5569  T
Q  461 ctttaccctt 470  Q
     |||||||||    
T  5570 ttttaccctt 5579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 55; Significance: 3e-22; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 363 - 445
Target Start/End: Complemental strand, 12799 - 12717
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||| ||||||||||||||||| |||||||||||| |||||||||||||| |||| ||||||| ||||||| |||||||||||    
T  12799 accatgagcttatagcttatttgacgagcttataagctatttttcagaagctattccaagtagcgtttgaggttatagcttat 12717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 300 - 332
Target Start/End: Complemental strand, 12863 - 12831
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttga 332  Q
    ||||| |||||||||||||||||||||||||||    
T  12863 agcttttagcttatagcttataagctcgtttga 12831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 363 - 417
Target Start/End: Complemental strand, 27216 - 27162
Alignment:
Q  363 accacgagcttatagcttatttcacgagcttataaactatttttcagaagttatt 417  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  27216 accatgagcttatagcttatttcacgagcttataagctatttttcagaagctatt 27162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 27281 - 27248
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  27281 agcttttagcttatagcttataagctcgtttgac 27248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 41822 - 41765
Alignment:
Q  388 gagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttat 445  Q
    |||||||||| |||||||||||||| |||| ||||||| |||||||||||||||||||    
T  41822 gagcttataagctatttttcagaagctattccaagtagcgtttgagcttatagcttat 41765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Complemental strand, 41891 - 41858
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  41891 agcttttagcttatagcttataagctcgtttgac 41858  T

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Target: scaffold0076 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 369 - 437
Target Start/End: Original strand, 10833 - 10901
Alignment:
Q  369 agcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagctta 437  Q
    |||||||||||||||||||||| |||||| |||||||||||| | |||| ||| ||| |||||||||||    
T  10833 agcttatagcttatttcacgagtttataagctatttttcagacgctattccaaatagcgtttgagctta 10901  T

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Target: scaffold0263 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 201
Target Start/End: Complemental strand, 13450 - 13373
Alignment:
Q  123 atatactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    ||||||| ||||||||||||| | ||| ||| ||| ||||||| | |||| ||||||||||||||||||||||||||||    
T  13450 atatacttcctttgtccctat-tgtaagcacccttctattagatgcaaaaggtgcttacatatagggacggagggagta 13373  T

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Target: scaffold1360 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold1360
Description:

Target: scaffold1360; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 432 - 499
Target Start/End: Complemental strand, 1251 - 1184
Alignment:
Q  432 agcttatagcttatcattttttctttcatctttacccttgctattttctctaataaccaattctaccc 499  Q
    ||||||||||||||||| ||||||||||| |||||||||  |||||| ||||| | |||||| |||||    
T  1251 agcttatagcttatcatattttctttcatttttacccttattattttatctaaaatccaattttaccc 1184  T

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Target: scaffold1360; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 278 - 332
Target Start/End: Complemental strand, 1400 - 1346
Alignment:
Q  278 tgtttggtaagtccactaaatgagcttatagcttatagcttataagctcgtttga 332  Q
    ||||||||||| |||  |||||||||||||||  |||||||||||||||||||||    
T  1400 tgtttggtaagaccaaaaaatgagcttatagcgaatagcttataagctcgtttga 1346  T

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Target: scaffold0598 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 345 - 410
Target Start/End: Complemental strand, 9062 - 8997
Alignment:
Q  345 gtttggtaatggtctcttaccacgagcttatagcttatttcacgagcttataaactatttttcaga 410  Q
    ||||||||||||  | | ||||||||||||||| ||||||||| || |||||| ||||||||||||    
T  9062 gtttggtaatgggttttcaccacgagcttatagtttatttcacaagtttataagctatttttcaga 8997  T

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Target: scaffold0043 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 452
Target Start/End: Complemental strand, 59258 - 59171
Alignment:
Q  365 cacgagcttatagcttatttcacgagcttataaactatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttt 452  Q
    |||||||||||| |||||||||| ||||||||   |||| ||||||   ||||| || |||  ||| |||||||||||||||||||||    
T  59258 cacgagcttataacttatttcactagcttatagtttattattcagacactattttaaatagcatttaagcttatagcttatcattttt 59171  T

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Target: scaffold0347 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 400 - 470
Target Start/End: Original strand, 11823 - 11893
Alignment:
Q  400 tatttttcagaagttatttcaagtagtgtttgagcttatagcttatcattttttctttcatctttaccctt 470  Q
    ||||||| ||| ||||||| || ||| ||||||||||||| ||||||||||||| || ||| |||| ||||    
T  11823 tattttttagatgttattttaaatagcgtttgagcttataacttatcattttttattccatttttatcctt 11893  T

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Target: scaffold0166 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 333
Target Start/End: Original strand, 36355 - 36388
Alignment:
Q  300 agcttatagcttatagcttataagctcgtttgac 333  Q
    ||||| ||||||||||||||||||||||||||||    
T  36355 agcttttagcttatagcttataagctcgtttgac 36388  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 125 - 201
Target Start/End: Original strand, 22372 - 22448
Alignment:
Q  125 atactccctttgtccctatatctaaacacacttttattagaagaaaaaagtgcttacatatagggacggagggagta 201  Q
    |||||||||  || ||||||| |||||||  |||||||||| |  ||| |||||||| |||||||||||| ||||||    
T  22372 atactccctccgttcctatatataaacaccattttattagatgctaaaggtgcttacgtatagggacggaaggagta 22448  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 168 - 200
Target Start/End: Original strand, 504633 - 504665
Alignment:
Q  168 aaaaaagtgcttacatatagggacggagggagt 200  Q
    ||||| |||||||||||||||||||||||||||    
T  504633 aaaaaggtgcttacatatagggacggagggagt 504665  T

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