View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17953_low_7 (Length: 330)
Name: NF17953_low_7
Description: NF17953
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17953_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 18 - 314
Target Start/End: Original strand, 4213454 - 4213750
Alignment:
| Q |
18 |
aaggagagtgatttgaaatttagattttgtgcttttgttgaggatatttaaggtgttgcagtgttggattgacattatcactttcatagatgatattctg |
117 |
Q |
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| T |
4213454 |
aaggagagtgatttgaaatttagattttgtgcttttgttgaggatatttaaggtgttgcagtgttggattgacattatcacattaatagatgatattctg |
4213553 |
T |
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| Q |
118 |
catgtccatgttaacaacgtaataaaacgagaaacacttcagacatggaataagagacaattgcagttctcaatgtttttctggatagcatgtagcagga |
217 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |
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| T |
4213554 |
catgtccatgttaacatcgtaataaaacgagaaacacttcagacatggaataagagacagttgcagttctcaatgtttttctggatagaatgtagcagga |
4213653 |
T |
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| Q |
218 |
taatgttgcgtaatgttttattttcatgagtatgtttttcctttgagaaagttactttcatgagtatgttgtgtacttagttaactgttgataatat |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
4213654 |
taatgttgcgtaatgttttattttcatgagtatgtttttcctttgagaaaattattttcatgagtatgttgtgtacttagttaactgttgataatat |
4213750 |
T |
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