View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17954_low_25 (Length: 247)
Name: NF17954_low_25
Description: NF17954
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17954_low_25 |
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Alignment Details
Target: chr3 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 106 - 231
Target Start/End: Original strand, 52518518 - 52518643
Alignment:
| Q |
106 |
gtaataactactcacgcattttaaacgtaaagaattcaaatattttagatttaaactcaaacatctacgtattatgggagacctaatctagtgttataat |
205 |
Q |
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| T |
52518518 |
gtaataactactcacgcattttaaacgtaaagaatttgaatattttaaatttaaactcaaacatctacgtattatgggagacctaatctagtattataat |
52518617 |
T |
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| Q |
206 |
taaattagagttattgtagtcaaatg |
231 |
Q |
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| T |
52518618 |
taaattagagttattgtactcaaatg |
52518643 |
T |
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