View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17955_high_16 (Length: 218)
Name: NF17955_high_16
Description: NF17955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17955_high_16 |
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Alignment Details
Target: chr5 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 7 - 201
Target Start/End: Complemental strand, 36715552 - 36715358
Alignment:
| Q |
7 |
cttttgacgttttttgcattgattcaaaggatatccaatcatacaacgattagcgcaataacgaggaagtttctcctacaagaacaagacattcacataa |
106 |
Q |
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| T |
36715552 |
cttttgatgttttttgcattgattcaaaggatgtccaatcatacaacgattagcgcaataacgaggaagtttctcctacaagaacaagacatccacataa |
36715453 |
T |
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| Q |
107 |
aaagcatacttttatcgtttaattataatgtcatcgtaaatacgcttagacaaatcaagatcaacgagatcctaacataatggccactggttctg |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
36715452 |
aaagcatacttttatcgtttaattataatgtcatcgtaaatacgcttagacaaatcaagatcaacgagatcctaacataatggccaaaggttctg |
36715358 |
T |
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