View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17956_low_3 (Length: 568)

Name: NF17956_low_3
Description: NF17956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17956_low_3
NF17956_low_3
[»] chr1 (46 HSPs)
chr1 (245-516)||(29644227-29644498)
chr1 (8-151)||(2405605-2405748)
chr1 (8-151)||(21107176-21107319)
chr1 (8-151)||(21111043-21111186)
chr1 (8-151)||(21114383-21114526)
chr1 (12-151)||(45941512-45941651)
chr1 (7-151)||(21018351-21018495)
chr1 (12-151)||(41058191-41058330)
chr1 (188-327)||(21019228-21019368)
chr1 (188-327)||(2404721-2404870)
chr1 (365-489)||(44890055-44890180)
chr1 (188-326)||(21108245-21108393)
chr1 (86-151)||(2794323-2794388)
chr1 (147-204)||(41058953-41059010)
chr1 (245-326)||(41059152-41059234)
chr1 (86-151)||(673033-673098)
chr1 (86-151)||(20398949-20399014)
chr1 (86-151)||(28111152-28111217)
chr1 (417-505)||(3927619-3927709)
chr1 (157-204)||(21108144-21108191)
chr1 (86-149)||(27536494-27536557)
chr1 (86-149)||(31204936-31204999)
chr1 (86-149)||(37183826-37183889)
chr1 (85-151)||(905647-905713)
chr1 (147-204)||(2404924-2404981)
chr1 (86-151)||(3796789-3796854)
chr1 (86-151)||(49498460-49498525)
chr1 (353-465)||(31068695-31068807)
chr1 (188-326)||(42021721-42021871)
chr1 (84-148)||(45960705-45960769)
chr1 (100-151)||(1950432-1950483)
chr1 (88-151)||(23021888-23021951)
chr1 (386-468)||(51799559-51799642)
chr1 (514-550)||(29644763-29644799)
chr1 (8-64)||(49853023-49853079)
chr1 (153-204)||(21019122-21019173)
chr1 (257-326)||(45961638-45961707)
chr1 (89-149)||(6070919-6070979)
chr1 (411-478)||(9483849-9483917)
chr1 (422-465)||(27364801-27364845)
chr1 (257-325)||(27537144-27537212)
chr1 (425-504)||(36099609-36099689)
chr1 (445-497)||(36192196-36192248)
chr1 (287-329)||(37640979-37641021)
chr1 (86-151)||(29643184-29643249)
chr1 (188-220)||(41059064-41059096)
[»] chr3 (109 HSPs)
chr3 (8-151)||(20728519-20728662)
chr3 (8-151)||(16244052-16244195)
chr3 (13-151)||(45896560-45896698)
chr3 (12-151)||(25584856-25584995)
chr3 (8-151)||(43927014-43927157)
chr3 (8-151)||(10881659-10881802)
chr3 (8-151)||(31549351-31549494)
chr3 (12-151)||(49742795-49742934)
chr3 (8-143)||(10902127-10902262)
chr3 (13-151)||(2778904-2779044)
chr3 (13-151)||(2775661-2775802)
chr3 (8-151)||(41977180-41977323)
chr3 (12-151)||(3840696-3840835)
chr3 (53-151)||(29343791-29343889)
chr3 (245-329)||(16185575-16185659)
chr3 (352-504)||(35502903-35503056)
chr3 (188-304)||(10880798-10880924)
chr3 (188-326)||(53814971-53815120)
chr3 (188-326)||(29344624-29344773)
chr3 (58-151)||(52309537-52309630)
chr3 (196-326)||(41976321-41976461)
chr3 (188-327)||(34984602-34984759)
chr3 (245-326)||(35411676-35411758)
chr3 (245-326)||(16243166-16243247)
chr3 (209-304)||(43808900-43809003)
chr3 (187-326)||(20729336-20729477)
chr3 (86-151)||(24125678-24125743)
chr3 (86-151)||(24128955-24129020)
chr3 (245-326)||(31548551-31548632)
chr3 (76-151)||(8461427-8461502)
chr3 (86-151)||(2873743-2873808)
chr3 (86-151)||(6922699-6922764)
chr3 (86-151)||(7486750-7486815)
chr3 (86-151)||(30690915-30690980)
chr3 (86-151)||(32287273-32287338)
chr3 (147-204)||(34984491-34984548)
chr3 (147-204)||(41976493-41976550)
chr3 (86-151)||(53816007-53816072)
chr3 (245-326)||(54460367-54460448)
chr3 (245-325)||(9380012-9380092)
chr3 (257-327)||(19302295-19302365)
chr3 (86-148)||(28266099-28266161)
chr3 (86-151)||(11190706-11190771)
chr3 (86-151)||(11784945-11785010)
chr3 (86-151)||(16184637-16184702)
chr3 (147-204)||(31548753-31548810)
chr3 (75-143)||(35751628-35751696)
chr3 (245-327)||(3839789-3839874)
chr3 (86-149)||(47051677-47051740)
chr3 (86-149)||(50461498-50461561)
chr3 (245-304)||(54736769-54736828)
chr3 (86-148)||(6434728-6434790)
chr3 (86-151)||(539006-539071)
chr3 (188-250)||(6445513-6445577)
chr3 (86-151)||(17528711-17528776)
chr3 (249-326)||(19305470-19305547)
chr3 (86-151)||(22416784-22416849)
chr3 (86-151)||(27092073-27092138)
chr3 (86-151)||(37408860-37408925)
chr3 (86-143)||(43809767-43809824)
chr3 (86-151)||(46885119-46885184)
chr3 (86-151)||(54723921-54723986)
chr3 (100-151)||(10885036-10885087)
chr3 (153-204)||(16243374-16243425)
chr3 (147-201)||(29344513-29344567)
chr3 (86-151)||(12561184-12561249)
chr3 (55-148)||(17546040-17546132)
chr3 (86-151)||(28008021-28008086)
chr3 (86-151)||(52990879-52990944)
chr3 (86-151)||(54720150-54720215)
chr3 (152-204)||(3293591-3293643)
chr3 (102-142)||(32367096-32367136)
chr3 (153-204)||(3840016-3840067)
chr3 (395-505)||(45967990-45968101)
chr3 (86-149)||(47055107-47055170)
chr3 (250-327)||(10884017-10884094)
chr3 (250-327)||(23299477-23299554)
chr3 (395-465)||(25844736-25844806)
chr3 (73-151)||(30219943-30220020)
chr3 (188-251)||(54460460-54460525)
chr3 (87-149)||(55031947-55032009)
chr3 (87-149)||(55034807-55034869)
chr3 (147-204)||(10880978-10881035)
chr3 (86-151)||(17531606-17531671)
chr3 (86-151)||(23298565-23298630)
chr3 (86-151)||(25442809-25442874)
chr3 (87-151)||(10106551-10106614)
chr3 (87-151)||(18641723-18641787)
chr3 (87-151)||(18644719-18644783)
chr3 (353-465)||(18689342-18689454)
chr3 (445-497)||(19652155-19652207)
chr3 (73-113)||(22783819-22783859)
chr3 (73-113)||(22788183-22788223)
chr3 (87-151)||(52200092-52200156)
chr3 (97-139)||(9392925-9392967)
chr3 (188-222)||(16243286-16243320)
chr3 (101-151)||(48064000-48064050)
chr3 (331-373)||(52250647-52250689)
chr3 (250-326)||(538015-538091)
chr3 (250-326)||(6921890-6921966)
chr3 (86-151)||(17039972-17040037)
chr3 (86-151)||(17141587-17141652)
chr3 (421-465)||(25132771-25132816)
chr3 (188-225)||(28265112-28265149)
chr3 (86-151)||(34983803-34983868)
chr3 (188-220)||(3839930-3839962)
chr3 (73-113)||(18542771-18542811)
chr3 (331-367)||(19875818-19875854)
chr3 (87-151)||(35412689-35412753)
[»] chr7 (63 HSPs)
chr7 (354-516)||(40681662-40681826)
chr7 (12-151)||(4595903-4596042)
chr7 (8-151)||(17730895-17731038)
chr7 (8-151)||(26557580-26557723)
chr7 (6-151)||(11919753-11919898)
chr7 (8-151)||(4695562-4695705)
chr7 (12-151)||(4542878-4543017)
chr7 (12-151)||(4546950-4547089)
chr7 (188-304)||(4694745-4694871)
chr7 (12-151)||(8277067-8277207)
chr7 (8-151)||(35961172-35961322)
chr7 (31-151)||(9271378-9271498)
chr7 (188-326)||(9865494-9865642)
chr7 (188-327)||(45287989-45288139)
chr7 (65-151)||(20594344-20594430)
chr7 (245-326)||(8276012-8276093)
chr7 (244-326)||(45291392-45291474)
chr7 (72-149)||(9864680-9864757)
chr7 (245-326)||(20081559-20081640)
chr7 (86-151)||(23224873-23224938)
chr7 (413-512)||(14316441-14316541)
chr7 (245-327)||(9273953-9274035)
chr7 (188-326)||(9080376-9080525)
chr7 (245-326)||(17729973-17730054)
chr7 (86-151)||(37415391-37415456)
chr7 (86-151)||(45287037-45287102)
chr7 (245-327)||(4596843-4596925)
chr7 (85-151)||(14683411-14683477)
chr7 (147-204)||(4694925-4694982)
chr7 (147-204)||(9865383-9865440)
chr7 (86-151)||(45290448-45290513)
chr7 (100-151)||(9132742-9132793)
chr7 (245-304)||(10344638-10344697)
chr7 (153-204)||(17730217-17730268)
chr7 (150-204)||(9273779-9273833)
chr7 (86-148)||(16165833-16165895)
chr7 (86-151)||(10345276-10345341)
chr7 (86-151)||(26136096-26136161)
chr7 (86-151)||(26144476-26144541)
chr7 (86-151)||(37166115-37166180)
chr7 (77-149)||(2441237-2441309)
chr7 (353-472)||(16559093-16559213)
chr7 (353-472)||(16606449-16606569)
chr7 (153-204)||(9080579-9080630)
chr7 (414-504)||(38153634-38153725)
chr7 (102-152)||(20080702-20080752)
chr7 (100-151)||(3067959-3068010)
chr7 (90-149)||(6603542-6603601)
chr7 (86-149)||(13449744-13449807)
chr7 (86-149)||(13842723-13842786)
chr7 (354-495)||(27853859-27854001)
chr7 (353-465)||(34236231-34236344)
chr7 (8-64)||(9864635-9864691)
chr7 (386-465)||(29375709-29375789)
chr7 (103-151)||(48645555-48645603)
chr7 (86-149)||(11398017-11398080)
chr7 (86-148)||(5242118-5242180)
chr7 (331-373)||(41805281-41805323)
chr7 (86-151)||(10469225-10469290)
chr7 (73-148)||(13809472-13809546)
chr7 (56-148)||(7227613-7227704)
chr7 (423-462)||(9095708-9095748)
chr7 (331-367)||(27218651-27218687)
[»] scaffold0007 (1 HSPs)
scaffold0007 (8-151)||(248612-248755)
[»] chr2 (74 HSPs)
chr2 (72-204)||(13136964-13137096)
chr2 (8-151)||(5666594-5666736)
chr2 (196-326)||(43722904-43723035)
chr2 (8-151)||(43723776-43723919)
chr2 (12-151)||(40781548-40781687)
chr2 (191-326)||(5104953-5105086)
chr2 (8-148)||(6826850-6826990)
chr2 (12-151)||(31585830-31585969)
chr2 (188-326)||(6825974-6826114)
chr2 (12-139)||(15470546-15470673)
chr2 (12-151)||(43207778-43207919)
chr2 (58-151)||(13971830-13971923)
chr2 (188-327)||(3874481-3874630)
chr2 (13-151)||(42368600-42368740)
chr2 (58-149)||(5105805-5105896)
chr2 (226-326)||(10599951-10600051)
chr2 (192-304)||(13136784-13136906)
chr2 (245-327)||(13972732-13972814)
chr2 (86-151)||(9185388-9185453)
chr2 (85-151)||(25959651-25959717)
chr2 (147-204)||(6826168-6826225)
chr2 (86-151)||(9188616-9188681)
chr2 (86-151)||(29440571-29440636)
chr2 (86-151)||(37279640-37279705)
chr2 (100-151)||(3875363-3875414)
chr2 (251-326)||(5665830-5665905)
chr2 (86-151)||(22021144-22021209)
chr2 (257-326)||(25139971-25140040)
chr2 (86-151)||(25874257-25874322)
chr2 (86-151)||(45493120-45493185)
chr2 (86-151)||(45500862-45500927)
chr2 (153-204)||(5666058-5666109)
chr2 (86-149)||(31427505-31427568)
chr2 (395-496)||(21579667-21579769)
chr2 (58-151)||(25138866-25138960)
chr2 (86-151)||(1386386-1386451)
chr2 (147-204)||(3874684-3874741)
chr2 (86-151)||(8888712-8888777)
chr2 (90-151)||(11347863-11347924)
chr2 (86-151)||(12219872-12219937)
chr2 (90-151)||(24235172-24235233)
chr2 (90-151)||(24238444-24238505)
chr2 (86-151)||(25870860-25870925)
chr2 (55-148)||(30926621-30926713)
chr2 (12-64)||(5105871-5105923)
chr2 (86-142)||(33310752-33310808)
chr2 (86-149)||(45457240-45457303)
chr2 (86-148)||(16790721-16790783)
chr2 (85-151)||(30274731-30274797)
chr2 (86-151)||(9966333-9966398)
chr2 (8-65)||(25138835-25138892)
chr2 (86-151)||(27266865-27266930)
chr2 (257-326)||(38014636-38014705)
chr2 (86-151)||(40259103-40259168)
chr2 (147-203)||(5105124-5105180)
chr2 (245-329)||(16788386-16788469)
chr2 (147-203)||(43723098-43723154)
chr2 (100-151)||(16179203-16179254)
chr2 (257-304)||(31430569-31430616)
chr2 (86-149)||(38015597-38015660)
chr2 (86-149)||(45453952-45454015)
chr2 (188-247)||(13972656-13972717)
chr2 (421-465)||(20947116-20947161)
chr2 (86-151)||(22630917-22630982)
chr2 (86-151)||(37937183-37937248)
chr2 (87-151)||(25820811-25820875)
chr2 (153-204)||(13972551-13972602)
chr2 (257-327)||(25873202-25873272)
chr2 (331-373)||(26146790-26146832)
chr2 (331-373)||(43310834-43310876)
chr2 (86-151)||(36808406-36808471)
chr2 (287-327)||(11059029-11059069)
chr2 (422-465)||(12807581-12807625)
chr2 (352-404)||(40430010-40430062)
[»] scaffold0080 (2 HSPs)
scaffold0080 (8-151)||(27203-27346)
scaffold0080 (244-326)||(26253-26336)
[»] chr4 (108 HSPs)
chr4 (8-151)||(40795096-40795239)
chr4 (8-151)||(52006416-52006559)
chr4 (12-151)||(38283378-38283517)
chr4 (8-151)||(19827509-19827648)
chr4 (327-506)||(40434108-40434288)
chr4 (8-151)||(24044026-24044169)
chr4 (12-151)||(40902972-40903111)
chr4 (8-151)||(44164876-44165019)
chr4 (13-151)||(15445256-15445393)
chr4 (8-151)||(15429741-15429884)
chr4 (8-151)||(15436355-15436498)
chr4 (12-151)||(27676944-27677083)
chr4 (8-151)||(49270773-49270915)
chr4 (12-151)||(48415414-48415557)
chr4 (188-326)||(19819950-19820089)
chr4 (330-479)||(5633851-5634001)
chr4 (245-327)||(14571025-14571107)
chr4 (58-151)||(19820821-19820914)
chr4 (188-326)||(27677817-27677966)
chr4 (188-304)||(27691885-27692003)
chr4 (419-502)||(41458113-41458196)
chr4 (188-327)||(19826700-19826850)
chr4 (188-327)||(52007292-52007432)
chr4 (245-326)||(5680469-5680550)
chr4 (67-151)||(12782998-12783082)
chr4 (188-327)||(15430616-15430767)
chr4 (188-327)||(15437230-15437381)
chr4 (245-327)||(24044976-24045058)
chr4 (188-326)||(44164001-44164142)
chr4 (244-326)||(53010376-53010458)
chr4 (353-504)||(296266-296418)
chr4 (8-112)||(3720483-3720587)
chr4 (245-304)||(40794214-40794273)
chr4 (85-151)||(27014357-27014423)
chr4 (86-151)||(3797771-3797836)
chr4 (86-151)||(5670671-5670736)
chr4 (86-151)||(5672989-5673054)
chr4 (245-326)||(12782106-12782187)
chr4 (86-151)||(19859485-19859550)
chr4 (147-204)||(27677706-27677763)
chr4 (86-151)||(34017744-34017809)
chr4 (86-151)||(39501742-39501807)
chr4 (86-151)||(40616771-40616836)
chr4 (86-143)||(48637607-48637664)
chr4 (86-151)||(52530898-52530963)
chr4 (245-304)||(21419001-21419060)
chr4 (196-296)||(35509229-35509320)
chr4 (245-327)||(3718335-3718417)
chr4 (86-148)||(56198950-56199012)
chr4 (86-151)||(11195769-11195834)
chr4 (86-151)||(19864480-19864545)
chr4 (147-204)||(24044792-24044849)
chr4 (86-151)||(24150766-24150831)
chr4 (147-204)||(27691774-27691831)
chr4 (86-151)||(39498403-39498468)
chr4 (153-204)||(19820143-19820194)
chr4 (153-204)||(21419202-21419253)
chr4 (245-327)||(27013228-27013311)
chr4 (86-149)||(33927068-33927131)
chr4 (153-204)||(35509379-35509430)
chr4 (153-204)||(52007187-52007238)
chr4 (86-149)||(56195623-56195686)
chr4 (8-70)||(12786287-12786349)
chr4 (147-204)||(15430505-15430562)
chr4 (147-204)||(15437119-15437176)
chr4 (86-151)||(18673045-18673110)
chr4 (352-496)||(33100877-33101022)
chr4 (102-151)||(37103195-37103244)
chr4 (147-204)||(44164196-44164253)
chr4 (153-204)||(3718538-3718589)
chr4 (56-151)||(15432172-15432267)
chr4 (153-204)||(19826904-19826955)
chr4 (86-149)||(34319880-34319943)
chr4 (86-148)||(15405044-15405106)
chr4 (257-326)||(29323979-29324048)
chr4 (257-326)||(44809835-44809904)
chr4 (87-151)||(18911592-18911656)
chr4 (275-327)||(49269734-49269786)
chr4 (73-140)||(8871716-8871782)
chr4 (73-148)||(8877451-8877525)
chr4 (157-204)||(12782318-12782365)
chr4 (86-149)||(15812099-15812162)
chr4 (257-304)||(34320775-34320822)
chr4 (153-204)||(40794416-40794467)
chr4 (85-148)||(46955440-46955503)
chr4 (445-495)||(38655797-38655847)
chr4 (8-45)||(12238447-12238484)
chr4 (250-326)||(15431164-15431240)
chr4 (250-326)||(15437778-15437854)
chr4 (86-151)||(35510085-35510150)
chr4 (5-45)||(3797710-3797750)
chr4 (87-151)||(5706486-5706550)
chr4 (353-465)||(5760010-5760122)
chr4 (87-151)||(12238359-12238423)
chr4 (75-151)||(15164287-15164363)
chr4 (108-151)||(3719217-3719260)
chr4 (86-149)||(29324921-29324983)
chr4 (188-222)||(24044903-24044937)
chr4 (8-45)||(5681608-5681645)
chr4 (86-151)||(21419882-21419947)
chr4 (86-151)||(25962152-25962217)
chr4 (86-151)||(53009521-53009586)
chr4 (152-204)||(8875418-8875470)
chr4 (445-493)||(10008592-10008640)
chr4 (445-497)||(19837825-19837877)
chr4 (421-504)||(20509363-20509447)
chr4 (334-374)||(38296284-38296324)
chr4 (286-326)||(48636709-48636749)
[»] scaffold1755 (1 HSPs)
scaffold1755 (13-151)||(215-353)
[»] scaffold0520 (4 HSPs)
scaffold0520 (8-151)||(8104-8247)
scaffold0520 (8-151)||(1434-1576)
scaffold0520 (188-327)||(4723-4881)
scaffold0520 (147-203)||(4631-4687)
[»] chr5 (72 HSPs)
chr5 (12-151)||(7271110-7271249)
chr5 (8-151)||(30066403-30066546)
chr5 (8-151)||(33552215-33552358)
chr5 (188-304)||(30065584-30065702)
chr5 (13-151)||(41876654-41876792)
chr5 (327-506)||(8249421-8249601)
chr5 (8-151)||(39192424-39192567)
chr5 (188-307)||(2836699-2836819)
chr5 (12-151)||(34831858-34831997)
chr5 (245-327)||(22937974-22938056)
chr5 (245-326)||(32837083-32837164)
chr5 (245-326)||(37214766-37214847)
chr5 (245-328)||(43490791-43490874)
chr5 (196-327)||(18031709-18031850)
chr5 (188-326)||(7270241-7270377)
chr5 (8-150)||(28787222-28787356)
chr5 (188-302)||(4100284-4100413)
chr5 (188-326)||(28788252-28788401)
chr5 (58-151)||(4099452-4099545)
chr5 (56-149)||(22131326-22131419)
chr5 (86-151)||(21332643-21332708)
chr5 (147-204)||(30065756-30065813)
chr5 (244-304)||(39191353-39191413)
chr5 (245-326)||(21827959-21828041)
chr5 (188-329)||(40916739-40916892)
chr5 (147-204)||(4100173-4100230)
chr5 (245-326)||(21336660-21336742)
chr5 (86-151)||(12058455-12058520)
chr5 (86-151)||(12088052-12088117)
chr5 (85-150)||(17664646-17664711)
chr5 (86-151)||(18952787-18952852)
chr5 (86-151)||(20055868-20055933)
chr5 (86-143)||(26752664-26752721)
chr5 (86-151)||(26895567-26895632)
chr5 (86-151)||(26907418-26907483)
chr5 (86-151)||(34132946-34133011)
chr5 (86-151)||(34143177-34143242)
chr5 (8-64)||(4099421-4099477)
chr5 (87-151)||(42063016-42063080)
chr5 (187-292)||(2837526-2837641)
chr5 (86-149)||(14016101-14016164)
chr5 (188-254)||(33551415-33551482)
chr5 (153-204)||(33551536-33551587)
chr5 (85-151)||(11959140-11959206)
chr5 (257-327)||(14016967-14017037)
chr5 (86-148)||(41306490-41306552)
chr5 (86-151)||(23044236-23044301)
chr5 (86-151)||(31863809-31863874)
chr5 (86-151)||(37215139-37215203)
chr5 (421-504)||(12832547-12832631)
chr5 (421-504)||(12864522-12864606)
chr5 (87-151)||(21335662-21335726)
chr5 (86-142)||(43491859-43491915)
chr5 (153-204)||(7270431-7270482)
chr5 (153-204)||(18031912-18031963)
chr5 (86-148)||(7625200-7625262)
chr5 (445-497)||(3580991-3581043)
chr5 (425-496)||(15772783-15772855)
chr5 (87-151)||(22936901-22936965)
chr5 (422-465)||(30723557-30723601)
chr5 (354-505)||(32018962-32019114)
chr5 (331-486)||(35637710-35637865)
chr5 (11-45)||(10629397-10629431)
chr5 (150-204)||(17663965-17664019)
chr5 (85-151)||(40583343-40583409)
chr5 (87-148)||(14375759-14375820)
chr5 (257-326)||(17747617-17747686)
chr5 (277-326)||(25329456-25329505)
chr5 (334-367)||(42039234-42039267)
chr5 (353-453)||(14921716-14921816)
chr5 (152-204)||(18240150-18240202)
chr5 (287-327)||(28563283-28563323)
[»] chr8 (53 HSPs)
chr8 (13-151)||(20887626-20887764)
chr8 (12-151)||(12583099-12583241)
chr8 (57-149)||(5584330-5584422)
chr8 (8-151)||(5980199-5980341)
chr8 (248-327)||(5540917-5540996)
chr8 (196-327)||(5981083-5981221)
chr8 (188-304)||(12582240-12582366)
chr8 (245-326)||(14420864-14420945)
chr8 (59-148)||(22173859-22173948)
chr8 (245-326)||(45156837-45156918)
chr8 (410-504)||(460119-460214)
chr8 (86-151)||(12516415-12516480)
chr8 (86-151)||(16953868-16953933)
chr8 (153-204)||(12582420-12582471)
chr8 (147-204)||(5980964-5981021)
chr8 (86-151)||(10663990-10664055)
chr8 (86-151)||(14421837-14421902)
chr8 (86-151)||(25231172-25231237)
chr8 (86-151)||(38248362-38248427)
chr8 (86-149)||(18825850-18825913)
chr8 (85-148)||(25591441-25591504)
chr8 (86-149)||(36710599-36710662)
chr8 (244-326)||(25228016-25228096)
chr8 (85-151)||(25594619-25594685)
chr8 (86-151)||(10498177-10498242)
chr8 (188-250)||(17895369-17895433)
chr8 (12-85)||(23597355-23597428)
chr8 (86-151)||(23619327-23619392)
chr8 (102-151)||(33883329-33883378)
chr8 (86-151)||(45155232-45155297)
chr8 (353-504)||(16839268-16839420)
chr8 (100-151)||(18721258-18721309)
chr8 (86-149)||(18824357-18824420)
chr8 (86-151)||(17931072-17931137)
chr8 (86-151)||(21279732-21279797)
chr8 (86-143)||(23643919-23643976)
chr8 (56-137)||(30785025-30785108)
chr8 (86-149)||(14589584-14589647)
chr8 (263-326)||(18826771-18826834)
chr8 (245-326)||(19792926-19793009)
chr8 (100-151)||(44027070-44027121)
chr8 (246-292)||(30640541-30640587)
chr8 (90-151)||(13196948-13197009)
chr8 (86-151)||(31284765-31284830)
chr8 (86-151)||(33419747-33419812)
chr8 (73-113)||(5613668-5613708)
chr8 (8-64)||(22173827-22173883)
chr8 (98-151)||(2560644-2560697)
chr8 (262-329)||(10663008-10663075)
chr8 (331-367)||(12332423-12332459)
chr8 (445-497)||(17858153-17858205)
chr8 (287-327)||(22223291-22223331)
chr8 (287-327)||(22229633-22229673)
[»] scaffold1809 (1 HSPs)
scaffold1809 (8-139)||(171-302)
[»] scaffold0757 (3 HSPs)
scaffold0757 (8-151)||(5446-5589)
scaffold0757 (188-326)||(4563-4713)
scaffold0757 (153-204)||(4767-4818)
[»] chr6 (62 HSPs)
chr6 (8-151)||(20185840-20185983)
chr6 (8-151)||(22150008-22150151)
chr6 (8-151)||(10290068-10290211)
chr6 (8-151)||(23842684-23842826)
chr6 (8-150)||(23847865-23848010)
chr6 (13-151)||(30655540-30655681)
chr6 (18-151)||(5737974-5738112)
chr6 (245-326)||(9953036-9953117)
chr6 (188-326)||(10289186-10289334)
chr6 (186-326)||(28666044-28666176)
chr6 (58-151)||(17106545-17106638)
chr6 (353-501)||(2540551-2540700)
chr6 (73-151)||(9839345-9839422)
chr6 (13-108)||(11729230-11729327)
chr6 (147-204)||(10289388-10289445)
chr6 (86-151)||(11402353-11402418)
chr6 (85-151)||(9954059-9954125)
chr6 (356-465)||(34600866-34600976)
chr6 (356-465)||(34627411-34627521)
chr6 (86-151)||(2379326-2379391)
chr6 (356-516)||(10304142-10304300)
chr6 (86-151)||(14281483-14281548)
chr6 (86-151)||(24400275-24400340)
chr6 (86-151)||(24410394-24410459)
chr6 (86-149)||(26942398-26942461)
chr6 (153-204)||(28665920-28665971)
chr6 (86-151)||(3596744-3596809)
chr6 (86-151)||(4512572-4512637)
chr6 (86-151)||(6513352-6513417)
chr6 (86-151)||(13005285-13005350)
chr6 (86-151)||(18855988-18856053)
chr6 (86-151)||(19476098-19476163)
chr6 (86-151)||(22561126-22561191)
chr6 (86-151)||(23384715-23384780)
chr6 (86-151)||(26896222-26896287)
chr6 (386-465)||(34722173-34722253)
chr6 (245-292)||(13004434-13004481)
chr6 (100-151)||(13947114-13947165)
chr6 (86-148)||(7128398-7128460)
chr6 (85-151)||(32109764-32109830)
chr6 (86-151)||(2372349-2372414)
chr6 (86-151)||(24155329-24155394)
chr6 (86-139)||(28107750-28107803)
chr6 (421-516)||(32197862-32197959)
chr6 (152-204)||(22561782-22561834)
chr6 (88-151)||(11125662-11125725)
chr6 (8-45)||(17106514-17106551)
chr6 (352-464)||(18016708-18016821)
chr6 (445-497)||(17712993-17713045)
chr6 (326-390)||(19154280-19154344)
chr6 (256-304)||(20181295-20181343)
chr6 (256-304)||(22154648-22154696)
chr6 (445-497)||(33753569-33753621)
chr6 (85-151)||(1125697-1125763)
chr6 (445-495)||(19616279-19616329)
chr6 (12-45)||(11188097-11188130)
chr6 (287-327)||(14968782-14968822)
chr6 (331-367)||(19350519-19350555)
chr6 (58-134)||(23008174-23008250)
chr6 (58-134)||(23780114-23780190)
chr6 (100-151)||(28230690-28230742)
chr6 (331-367)||(29976537-29976573)
[»] scaffold0015 (2 HSPs)
scaffold0015 (8-151)||(198241-198382)
scaffold0015 (245-326)||(197242-197323)
[»] scaffold0005 (2 HSPs)
scaffold0005 (245-327)||(246269-246351)
scaffold0005 (86-151)||(293117-293182)
[»] scaffold0270 (4 HSPs)
scaffold0270 (188-327)||(911-1061)
scaffold0270 (245-302)||(4339-4396)
scaffold0270 (245-302)||(11469-11526)
scaffold0270 (77-149)||(17-89)
[»] scaffold0381 (2 HSPs)
scaffold0381 (85-151)||(5360-5426)
scaffold0381 (245-327)||(6472-6555)
[»] scaffold1993 (1 HSPs)
scaffold1993 (245-326)||(1045-1126)
[»] scaffold0427 (1 HSPs)
scaffold0427 (86-151)||(3751-3816)
[»] scaffold0045 (1 HSPs)
scaffold0045 (86-149)||(89866-89929)
[»] scaffold2073 (1 HSPs)
scaffold2073 (90-151)||(834-895)
[»] scaffold0690 (1 HSPs)
scaffold0690 (86-151)||(7675-7740)
[»] scaffold0412 (1 HSPs)
scaffold0412 (86-151)||(225-290)
[»] scaffold0250 (1 HSPs)
scaffold0250 (86-151)||(19490-19555)
[»] scaffold0126 (1 HSPs)
scaffold0126 (85-148)||(14281-14344)
[»] scaffold1785 (1 HSPs)
scaffold1785 (97-151)||(1-55)
[»] scaffold1208 (1 HSPs)
scaffold1208 (85-151)||(279-345)
[»] scaffold0191 (1 HSPs)
scaffold0191 (85-151)||(4010-4076)
[»] scaffold0035 (2 HSPs)
scaffold0035 (97-151)||(62611-62665)
scaffold0035 (86-151)||(63953-64018)
[»] scaffold0321 (1 HSPs)
scaffold0321 (86-151)||(2968-3033)
[»] scaffold0233 (1 HSPs)
scaffold0233 (386-495)||(10948-11058)
[»] scaffold0009 (1 HSPs)
scaffold0009 (86-148)||(241597-241659)
[»] scaffold0066 (1 HSPs)
scaffold0066 (86-151)||(57552-57617)
[»] scaffold0048 (1 HSPs)
scaffold0048 (86-151)||(15506-15571)
[»] scaffold0084 (2 HSPs)
scaffold0084 (86-151)||(19374-19439)
scaffold0084 (86-151)||(29459-29524)
[»] scaffold1063 (1 HSPs)
scaffold1063 (87-151)||(2595-2659)
[»] scaffold0225 (1 HSPs)
scaffold0225 (352-404)||(5576-5628)
[»] scaffold0065 (1 HSPs)
scaffold0065 (103-151)||(58661-58709)
[»] scaffold0218 (1 HSPs)
scaffold0218 (100-151)||(10503-10554)
[»] scaffold0002 (1 HSPs)
scaffold0002 (76-151)||(118399-118473)
[»] scaffold0038 (1 HSPs)
scaffold0038 (100-151)||(31188-31240)


Alignment Details
Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 245 - 516
Target Start/End: Original strand, 29644227 - 29644498
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcacctccctcctcaccatat 344  Q
    |||| |||||||||||  ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29644227 tttttttgctgcttaagtttgcttgtgaactcaaaaatatcataaaaagactctataaatgtggaatgacagactgtcatcacctccctcctcaccatat 29644326  T
Q  345 ttcgcaaccaacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctca 444  Q
    || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29644327 tttgcaaccaacaccctataccacaaactctccttttcagtcaacaaccgccaacaccacattcttaataatgcactattaaactccctaattctcctca 29644426  T
Q  445 ccccaaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaagttattttttgtggtcgtca 516  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||    
T  29644427 ccccaaaccaccaacctcctttctcaaacaaacagaattccagtcaacccaaattaatttttgtggtcgtca 29644498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 2405748 - 2405605
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  |||  |||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  2405748 tttgatttgattgcataaaattaaataacataaaataaagattcagttagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttt 2405649  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| |||||||| ||||||||||||||||||| |||||||    
T  2405648 cgaatcatctatgttttcctaattggtatactgcacctattctt 2405605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 21107176 - 21107319
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  ||| |||| |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  21107176 tttgatttgattgcctaaaattaaataacataaaataaagattcggtttgaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttt 21107275  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| |||||||  ||||||||||||||||||| |||||||    
T  21107276 cgaatcatctatgttcacctaattggtatactgcacctattctt 21107319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 21111043 - 21111186
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  ||| |||| |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  21111043 tttgatttgattgcctaaaattaaataacataaaataaagattcggtttgaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttt 21111142  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| |||||||  ||||||||||||||||||| |||||||    
T  21111143 cgaatcatctatgttctcctaattggtatactgcacctattctt 21111186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 21114383 - 21114526
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  ||| |||| |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  21114383 tttgatttgattgcctaaaattaaataacataaaataaagattcggtttgaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttt 21114482  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| |||||||  ||||||||||||||||||| |||||||    
T  21114483 cgaatcatctatgttctcctaattggtatactgcacctattctt 21114526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 45941651 - 45941512
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||||| |||||||||||||||||||||||  |||  || ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  45941651 atttgattgcataaaattaaataacataaaataaagattgagtaagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaa 45941552  T
Q  112 tcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||| ||||||| |||||||||||||||||||| |||||||    
T  45941551 tcatctatgttcccctaattggtatactgcacctattctt 45941512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 7 - 151
Target Start/End: Original strand, 21018351 - 21018495
Alignment:
Q  7 ttttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctt 106  Q
    |||| |||||||||| |||||||||||||||||||||||  ||| ||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  21018351 tttttatttgattgcataaaattaaataacataaaataaagattcggttaaaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctt 21018450  T
Q  107 tcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||| ||||||| |||||||| |||||||| || |||||||    
T  21018451 tcgaatcatctatgttcccctaatttgtatactgaacctattctt 21018495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 41058191 - 41058330
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||||| |||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||||||||||||||| || || ||||||||||||    
T  41058191 atttgattgcataaaattaaataacataaaataaagattcggttagaaaatatagatttggttagaaaatatgaagagagaagagattaggtctttcgaa 41058290  T
Q  112 tcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||| ||||||| | ||||||||||| |||||| |||||||    
T  41058291 tcatctatgttcctctaattggtatgctgcacctattctt 41058330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 188 - 327
Target Start/End: Original strand, 21019228 - 21019368
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatc 285  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||| |||| ||| ||| |||||||||||    
T  21019228 aatcgtgacacgtttttcagtaatcgtgacacgatgccctttttttagtttcttcagttttttcttgctgcttaagcttggttgcgaactcaaaaatatc 21019327  T
Q  286 ataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    || ||||||||||||||||   ||||||| ||||||||||||    
T  21019328 at-aaaagactctaaaaatagcgaatgactgactgtcatcac 21019368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 188 - 327
Target Start/End: Complemental strand, 2404870 - 2404721
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttt-cagcttcttcagtttt---------ttcttgctgcttaatcttgcttgtgaattca 277  Q
    |||| ||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||         ||||||||||||||||||||||||||| |||    
T  2404870 aatcatgtcacgtttttcagaaattgtgacacgatgccttttttcagcttcttcagttttatcttgcttttcttgctgcttaatcttgcttgtgaactca 2404771  T
Q  278 aaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    ||||||| |||||||||||||||||||   ||||||| ||||||||||||    
T  2404770 aaaatattataaaaagactctaaaaatagcgaatgactgactgtcatcac 2404721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 365 - 489
Target Start/End: Original strand, 44890055 - 44890180
Alignment:
Q  365 ccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctcaccc-caaaccaccaacctcc 463  Q
    ||||||||| ||||| |||||||||| ||||||||||||| | | |||||| |||||||||||||||||||||||||| |||| |||| ||| |||||||    
T  44890055 ccacaaactttccttctcagtcaacaaccgccaacaccacttccctaataaagcactattaaactccctaattctccttaccctcaaatcactaacctcc 44890154  T
Q  464 tttctcaaacaaacaggattccagtc 489  Q
    |||||||||||||||| |||||||||    
T  44890155 tttctcaaacaaacagaattccagtc 44890180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 188 - 326
Target Start/End: Original strand, 21108245 - 21108393
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattca 277  Q
    ||||||| ||| ||||||| ||||||||||||||| ||  |||||||| |||||||||||||        |||||| |||||||||||||| ||| ||||    
T  21108245 aatcgtgacacatttttcaataatcgtgacacgatccccttttttcagtttcttcagtttttcttgcttttcttgcagcttaatcttgcttttgagttca 21108344  T
Q  278 aaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||| |||||||||||||    ||||||| |||||||||||    
T  21108345 aaaatatcataagaagactctaaaaagagcgaatgactgactgtcatca 21108393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 2794388 - 2794323
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  2794388 agagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactgcacctattctt 2794323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 41058953 - 41059010
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  41058953 ttcttccttgtgtaacaaaccaccaaaattagggtttccataatcgtgtcacgttttt 41059010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 326
Target Start/End: Original strand, 41059152 - 41059234
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||||||||||||||   ||||||| |||||||||||    
T  41059152 ttttcttgctgcttaagcttgcttgcgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 41059234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 673033 - 673098
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||| || |||||||||| |||||||||||||||||||||||||||| |||||||    
T  673033 agagagatgagatcatgtatttcgaatcatctatgtttccctaattggtatactgcacctattctt 673098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 20399014 - 20398949
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||    
T  20399014 agagagatgagatcaggtctttcgagtcatctatgttcccctaattggtatactgcacctattctt 20398949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 28111217 - 28111152
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  28111217 agagagatgagatcagatctttcgaatcatctatgttcccctaattggtatactgcacctattctt 28111152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 417 - 505
Target Start/End: Original strand, 3927619 - 3927709
Alignment:
Q  417 gcactattaaactccctaattctcctca--ccccaaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaagttattttt 505  Q
    ||||||||||||||||||| ||||||    ||||||||||||||||||||||||||  ||||| | |||||| ||||||||||| ||||||    
T  3927619 gcactattaaactccctaaatctcctttacccccaaaccaccaacctcctttctcatgcaaaccgaattccaatcaacccaagtaattttt 3927709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 21108144 - 21108191
Alignment:
Q  157 tgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21108144 tgtaacaaaccacccaaattagggtttccataatcgtgtcacgttttt 21108191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 27536494 - 27536557
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  27536494 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 27536557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 31204999 - 31204936
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  31204999 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 31204936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 37183826 - 37183889
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  37183826 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 37183889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 905647 - 905713
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||||  |  |||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  905647 aagagagatgagttttggtctttcgaatcatctatgtttccctaattggtatactgcacttattctt 905713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 2404981 - 2404924
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||| ||||||||||||||| ||| |||||| ||||||||||||||||||||||||||    
T  2404981 ttctgccttgtgtaacaaacaaccgaaattagggtttccataatcgtgtcacgttttt 2404924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 3796789 - 3796854
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  3796789 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 3796854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 49498460 - 49498525
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| || ||||||||||||||| ||| ||| |||||||||||||||||||| |||||||    
T  49498460 agagagatgagattaggtctttcgaatcatctaagttcccctaattggtatactgcacctattctt 49498525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 465
Target Start/End: Complemental strand, 31068807 - 31068695
Alignment:
Q  353 caacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctcaccccaaac 452  Q
    |||||||||| |||| ||||||||| | ||   ||||| ||||||||||||| | | |||||| |||  ||||||||||||||| ||| | |||||||||    
T  31068807 caacaccctaaaccataaactctccctatccaccaacaaccgccaacaccacttccctaataaagcaaaattaaactccctaatactcattaccccaaac 31068708  T
Q  453 caccaacctcctt 465  Q
    ||| |||||||||    
T  31068707 cacgaacctcctt 31068695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 188 - 326
Target Start/End: Complemental strand, 42021871 - 42021721
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcctt--tttcagcttcttcagttttttc----------ttgctgcttaatcttgcttgtgaatt 275  Q
    ||||||| ||| |||||||||||||||||||||||||| |  |||||| ||||||| ||||||           ||||||||||| |||||||||||| |    
T  42021871 aatcgtgacacatttttcagtaatcgtgacacgatgccctcttttcagtttcttcaatttttttcttgcttttattgctgcttaaacttgcttgtgaact 42021772  T
Q  276 caaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||  ||||| |||||||||||||||||||   ||||||  |||||||||||    
T  42021771 cagtaatattataaaaagactctaaaaatagcgaatgattgactgtcatca 42021721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 45960705 - 45960769
Alignment:
Q  84 gaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    |||||||||||| |||||||||||||||||| | ||||| |||||||||||||| ||||| ||||    
T  45960705 gaagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtataatgcacctatt 45960769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 1950432 - 1950483
Alignment:
Q  100 aggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  1950432 aggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 1950483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 23021888 - 23021951
Alignment:
Q  88 agagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||| || ||||||||||||||| ||| ||| |||||||||||||||||||| |||||||    
T  23021888 agagatgagattaggtctttcgaatcatctaagttcccctaattggtatactgcacctattctt 23021951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 468
Target Start/End: Complemental strand, 51799642 - 51799559
Alignment:
Q  386 caacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctca-ccccaaaccaccaacctcctttct 468  Q
    ||||| ||||||||||||| | |  ||||| |||||||||||||||||||  ||||| | ||||||||||||||||||||||||    
T  51799642 caacaaccgccaacaccacttccccaataaggcactattaaactccctaaaactccttacccccaaaccaccaacctcctttct 51799559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 514 - 550
Target Start/End: Original strand, 29644763 - 29644799
Alignment:
Q  514 tcagagggtcccaaaaagacaaccgacacgcatcacc 550  Q
    |||||||||||||||||||||||||||||||||||||    
T  29644763 tcagagggtcccaaaaagacaaccgacacgcatcacc 29644799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 49853023 - 49853079
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatat 64  Q
    |||||||||||||| |||||||||||||||||||||||  ||| |||| ||||||||    
T  49853023 tttgatttgattgcataaaattaaataacataaaataaagattcggtttgaaaatat 49853079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 21019122 - 21019173
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||| ||||||||| || |||||||||||||||||||| |||||    
T  21019122 cttgtgtaacaacccacccaaactagggtttccataatcgtgtcacattttt 21019173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 45961638 - 45961707
Alignment:
Q  257 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||| |||||||||||| |||||| |||||||| ||||||||||||||    |||||| |||||||||||    
T  45961638 ttaagcttgcttgtgaactcaaaattatcataacaagactctaaaaatagcaaatgactgactgtcatca 45961707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 6070919 - 6070979
Alignment:
Q  89 gagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    ||||||| ||||||| |||||||||| | ||||| |||||||||||||| ||||| |||||    
T  6070919 gagatgagatcaggtttttcgaatcatcgatgttcccctaattggtatattgcacctattc 6070979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 478
Target Start/End: Complemental strand, 9483917 - 9483849
Alignment:
Q  411 aataatgcactattaaactccctaattctcctcacccc-aaaccaccaacctcctttctcaaacaaaca 478  Q
    ||||| ||| ||||||||||| ||||||| || ||||| ||||||||||||| ||| ||||||||||||    
T  9483917 aataaggcaatattaaactccataattcttcttacccctaaaccaccaaccttcttactcaaacaaaca 9483849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 465
Target Start/End: Original strand, 27364801 - 27364845
Alignment:
Q  422 attaaactccctaattctcctcacccc-aaaccaccaacctcctt 465  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||    
T  27364801 attaaactccctaattctccttacccctaaaccaccaacctcctt 27364845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 325
Target Start/End: Original strand, 27537144 - 27537212
Alignment:
Q  257 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatc 325  Q
    |||| |||||||||||| |||||| ||||||||||||||| |||||||    |||||| ||||||||||    
T  27537144 ttaagcttgcttgtgaactcaaaattatcataaaaagactataaaaatagcaaatgactgactgtcatc 27537212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 504
Target Start/End: Original strand, 36099609 - 36099689
Alignment:
Q  425 aaactccctaattctcctcac-cccaaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaagttatttt 504  Q
    |||||||||||||||||| || |||||||||||||||||||| |||   |||||||  |||||||| ||||| | ||||||    
T  36099609 aaactccctaattctccttacgcccaaaccaccaacctccttactcctgcaaacagtgttccagtccacccatgatatttt 36099689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 36192248 - 36192196
Alignment:
Q  445 ccccaaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaag 497  Q
    ||||||||||||||||||||| |||| ||||||||  ||||| ||||||||||    
T  36192248 ccccaaaccaccaacctccttactcatacaaacagagttccaatcaacccaag 36192196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 287 - 329
Target Start/End: Complemental strand, 37641021 - 37640979
Alignment:
Q  287 taaaaagactctaaaaatgtggaatgacagactgtcatcacct 329  Q
    |||||||||||||||||||||  ||||| ||||||||||||||    
T  37641021 taaaaagactctaaaaatgtgatatgacggactgtcatcacct 37640979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 29643184 - 29643249
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| | ||||| |||||| | ||||||||||| |||||||    
T  29643184 agagagatgagtttaggtctttcgaatcatcgatgttcccctaactagtatactgcacctattctt 29643249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 188 - 220
Target Start/End: Original strand, 41059064 - 41059096
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacg 220  Q
    ||||||| |||||||||||||||||||||||||    
T  41059064 aatcgtgacacgtttttcagtaatcgtgacacg 41059096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 6e-54; HSPs: 109)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 20728519 - 20728662
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  ||| |||||||||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  20728519 tttgatttgattgcataaaattaaataacataaaataaagattcggttagaaaatatagatttgattagaaaatatgaagagagatgagatcaggtcttt 20728618  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||    
T  20728619 cgaatcatctatgttcccctaattggtatactgcacatattctt 20728662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 16244195 - 16244052
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    ||||||||||| || |||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  16244195 tttgatttgatagcataaaattaaataacataaaataaagattcggttagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttt 16244096  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||    
T  16244095 cgaatcatctatgttcccctaattggtatactgcacctattctt 16244052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 45896698 - 45896560
Alignment:
Q  13 tttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaat 112  Q
    ||||||||| |||||||||||||||||||||||  |||  || ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  45896698 tttgattgcataaaattaaataacataaaataaagattgagtaagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaat 45896599  T
Q  113 cacctatgtttccctaattggtatactgcacatattctt 151  Q
    || ||||||| |||||||||||||||||||| |||||||    
T  45896598 catctatgttcccctaattggtatactgcacctattctt 45896560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 25584995 - 25584856
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||||| |||||||||||||||||||||||  |||   ||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  25584995 atttgattgcataaaattaaataacataaaataaagattgatttaaaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaa 25584896  T
Q  112 tcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||| ||||||| |||||||||||||||||||| |||||||    
T  25584895 tcatctatgttcccctaattggtatactgcacctattctt 25584856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 43927157 - 43927014
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||  ||||||  |||  |||||||||||||||||| |||||||||||||||||||||||| |||| ||||||    
T  43927157 tttgatttgattgcataaaattaaataacaggaaataaagattgagttagaaaatatagatttggttagaaaatatgaagagagatgagatcatgtcttt 43927058  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||    
T  43927057 cgaatcatctatgttcccctaattggtatactgcacctattctt 43927014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 10881802 - 10881659
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| ||||||||||| |||||||||||  |||  ||| |||||||||||||| ||||||||||||||||| |||||| |||| ||||||    
T  10881802 tttgatttgattgcataaaattaaatgacataaaataaagattaagttggaaaatatagatttggttagaaaatatgaagaaagatgagatcaagtcttt 10881703  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||    
T  10881702 cgaatcatctatgttcccctaattggtatactgcacctattctt 10881659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 31549494 - 31549351
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| ||||| |||||||||||||||||  ||  |||||||||||||| |||| |||||||||||||||||||||| | |||||||||||    
T  31549494 tttgatttgattgcataaaagtaaataacataaaataaagatccggttagaaaatataaattttgttagaaaatatgaagagagataagatcaggtcttt 31549395  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
     |||||| ||| |||||||||||||||||||||||| |||||||    
T  31549394 tgaatcatctaagtttccctaattggtatactgcacctattctt 31549351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 49742795 - 49742934
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||||| |||||||||||||||||||||||  |||  || ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  49742795 atttgattgcataaaattaaataacataaaataaagattgagtaagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaa 49742894  T
Q  112 tcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||  |||||| |||||||||||||| ||||| |||||||    
T  49742895 tcatttatgttcccctaattggtatattgcacctattctt 49742934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 10902262 - 10902127
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| ||||||||||| |||||||||||  |||  ||| ||||||| |||||| |||||||||||||||||||||||| |||||||||||    
T  10902262 tttgatttgattgcataaaattaaatgacataaaataaagattaagttggaaaataaagatttggttagaaaatatgaagagagatgagatcaggtcttt 10902163  T
Q  108 cgaatcacctatgtttccctaattggtatactgcac 143  Q
    ||||||| ||||||| |||||||||||||| |||||    
T  10902162 cgaatcatctatgttcccctaattggtatattgcac 10902127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 2779044 - 2778904
Alignment:
Q  13 tttgattgcgtaaaattaaataacataaaataattatttggttagaaaa--tatagatttagttagaaaatatgaagagagatgaaatcaggtctttcga 110  Q
    ||||||||| |||||||||||||||||||||||  |||   ||| ||||  ||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  2779044 tttgattgcataaaattaaataacataaaataaagattgatttaaaaaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcga 2778945  T
Q  111 atcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||| ||||||| |||||||||||||||||||| |||||||    
T  2778944 atcatctatgttcccctaattggtatactgcacctattctt 2778904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 2775802 - 2775661
Alignment:
Q  13 tttgattgcgtaaaattaaataacataaaataattatttggttagaaaa---tatagatttagttagaaaatatgaagagagatgaaatcaggtctttcg 109  Q
    ||||||||| |||||||||||||||||||||||  |||   ||| ||||   ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  2775802 tttgattgcataaaattaaataacataaaataaagattgatttaaaaaaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcg 2775703  T
Q  110 aatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||| ||||||| |||||||||||||||||||| |||||||    
T  2775702 aatcatctatgttcccctaattggtatactgcacctattctt 2775661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 41977323 - 41977180
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||   || ||||||||||||||||||| ||||  ||||||||| |||||||| ||||| |||||    
T  41977323 tttgatttgattgcataaaattaaataacataaaataaagtttcggttagaaaatatagatttggttatgaaatatgaatagagatgagatcagatcttt 41977224  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| || ||||  ||||||||||||||||||| |||||||    
T  41977223 cgaatcatctgtgttctcctaattggtatactgcacttattctt 41977180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 3840835 - 3840696
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||| | |||||||||||||||||||||||  |||  ||||||||||||| |||| ||||||||||||||||| |||||| |||||||||||||||    
T  3840835 atttgattacataaaattaaataacataaaataaagattgagttagaaaatatatatttggttagaaaatatgaagatagatgagatcaggtctttcgaa 3840736  T
Q  112 tcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||| | ||||| ||||||||| |||||| ||| |||||||    
T  3840735 tcatccatgttcccctaattgatatactacacctattctt 3840696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 53 - 151
Target Start/End: Original strand, 29343791 - 29343889
Alignment:
Q  53 gttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||    
T  29343791 gttagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacctattctt 29343889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 245 - 329
Target Start/End: Original strand, 16185575 - 16185659
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcacct 329  Q
    |||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16185575 ttttcttgctgcttaagcttgtttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcacct 16185659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 352 - 504
Target Start/End: Complemental strand, 35503056 - 35502903
Alignment:
Q  352 ccaacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctca-ccccaa 450  Q
    ||||||||||| |||||||||||||||| ||  |||||| ||||||||||||| | |  || || |||||||||||||||||||||||||| | |||||     
T  35503056 ccaacaccctaaaccacaaactctccttctccatcaacaaccgccaacaccacttcccaaacaaagcactattaaactccctaattctccttacccccag 35502957  T
Q  451 accaccaacctcctttctcaaacaaacaggattccagtcaacccaagttatttt 504  Q
    ||| ||||||||||| |||  |||||||| ||||||||||||||||| ||||||    
T  35502956 accgccaacctccttcctcccacaaacagaattccagtcaacccaagatatttt 35502903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 188 - 304
Target Start/End: Complemental strand, 10880924 - 10880798
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttt-cagcttcttcagtttt---------ttcttgctgcttaatcttgcttgtgaattca 277  Q
    |||||||||||||||||||  |||||||||||||||||||||| |||||||||||  |||         ||||||||||||||||||||||||||| |||    
T  10880924 aatcgtgtcacgtttttcataaatcgtgacacgatgccttttttcagcttcttcaactttatcttgcttttcttgctgcttaatcttgcttgtgaactca 10880825  T
Q  278 aaaatatcataaaaagactctaaaaat 304  Q
    |||||||||||||||||||||||||||    
T  10880824 aaaatatcataaaaagactctaaaaat 10880798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 188 - 326
Target Start/End: Complemental strand, 53815120 - 53814971
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcctt--tttcagcttcttcagttttttcttg---------ctgcttaatcttgcttgtgaattc 276  Q
    ||||||| |||||||||||||||| |||||||||||||||  |||||| |||||||| |||||||||         |||||||| |||||||||||| ||    
T  53815120 aatcgtgacacgtttttcagtaattgtgacacgatgccttcttttcagtttcttcagctttttcttgtttttcttgctgcttaagcttgcttgtgaactc 53815021  T
Q  277 aaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||||||||||||||||||||||||||||   ||||||| |||||||||||    
T  53815020 aaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 53814971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 188 - 326
Target Start/End: Original strand, 29344624 - 29344773
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattca 277  Q
    ||||||||||||||||||| ||||||||||||||| ||  |||||||| ||||||| |||||        |||||||||||||||||||||||||| |||    
T  29344624 aatcgtgtcacgtttttcaataatcgtgacacgatccccttttttcagtttcttcaatttttcttgcttttcttgctgcttaatcttgcttgtgaactca 29344723  T
Q  278 aaaatatcataa-aaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||| |||||||||||||||   ||||||| |||||||||||    
T  29344724 aaaatatcataagaaagactctaaaaatagtgaatgactgactgtcatca 29344773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 52309537 - 52309630
Alignment:
Q  58 aaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||| |||||  |||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||    
T  52309537 aaaataaagattcggttagaaaatatgaagagagatgagatcaggtctttcgaatcaactatgttcccctaattggtatattgcacctattctt 52309630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 41976461 - 41976321
Alignment:
Q  196 cacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattcaaaaatatc 285  Q
    ||||||||||||||||||||||||||| ||  |||||||| |||||||||||||        |||||||| ||||||||||||||||| ||||||||||     
T  41976461 cacgtttttcagtaatcgtgacacgatccccttttttcagtttcttcagtttttgttgcttttcttgctgtttaatcttgcttgtgaactcaaaaatatt 41976362  T
Q  286 ataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||||||| |||||||||||   ||||||| |||||||||||    
T  41976361 ataaaaacactctaaaaatagcgaatgactgactgtcatca 41976321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 188 - 327
Target Start/End: Original strand, 34984602 - 34984759
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttt-cagcttcttcagtttttt------------------cttgctgcttaatcttgctt 268  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||                  |||| |||||||||||||||    
T  34984602 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttttcagcttct-cagttttttgtttcttttcttgcttttcttgttgcttaatcttgctt 34984700  T
Q  269 gtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    ||||| ||||||||||||||||||||||||||||||   ||||||| ||||||||||||    
T  34984701 gtgaactcaaaaatatcataaaaagactctaaaaataacgaatgactgactgtcatcac 34984759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 35411758 - 35411676
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatg-tggaatgacagactgtcatca 326  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  35411758 ttttcttgctgcttaagtttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgttgaaatgacagactgtcatca 35411676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 16243247 - 16243166
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   ||||||| || ||||||||    
T  16243247 ttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgattgtcatca 16243166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 209 - 304
Target Start/End: Complemental strand, 43809003 - 43808900
Alignment:
Q  209 aatcgtgacacgatgcctttttc-agcttcttcagtttttt-------cttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaa 300  Q
    ||||||||||||||||||||||  |||||||||| ||||||       ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43809003 aatcgtgacacgatgcctttttttagcttcttcattttttttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaa 43808904  T
Q  301 aaat 304  Q
    ||||    
T  43808903 aaat 43808900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 187 - 326
Target Start/End: Original strand, 20729336 - 20729477
Alignment:
Q  187 taatcgtgtcacgtttttcagtaatcgtgacacgatgc-cttt-ttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatat 284  Q
    |||||||| ||||||||||||| ||||||||| ||| | |||| ||||| |||||| | ||||||||||||||||| |||||||||||| | ||||||||    
T  20729336 taatcgtgacacgtttttcagttatcgtgacatgattcactttcttcagtttcttc-gatttttcttgctgcttaagcttgcttgtgaactaaaaaatat 20729434  T
Q  285 cat-aaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||| ||||| |||||||||||   ||||||| |||||||||||    
T  20729435 cataaaaaaaactctaaaaatagcgaatgactgactgtcatca 20729477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 24125743 - 24125678
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  24125743 agagagatgagatcaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 24125678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 24129020 - 24128955
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  24129020 agagagatgagatcaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 24128955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 31548632 - 31548551
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||||||| |||||||| |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||  ||||||||||    
T  31548632 ttttcttactgcttaagcttggttgtgaactcaaaaatatcataaaaagactctaaaaatgtgaaatgacgaactgtcatca 31548551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 8461427 - 8461502
Alignment:
Q  76 gaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||| || ||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  8461427 gaaaagataaagagagatgagattaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 8461502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 2873808 - 2873743
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  2873808 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 2873743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 6922764 - 6922699
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  6922764 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 6922699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 7486815 - 7486750
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  7486815 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 7486750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 30690980 - 30690915
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||| | |||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  30690980 agagagataagatcaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 30690915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 32287273 - 32287338
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  32287273 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 32287338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 34984491 - 34984548
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  34984491 ttcttccttgtgtaacaaaccacccaaattagggttttcataatcgtgtcacgttttt 34984548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 41976550 - 41976493
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  41976550 ttcttccttgtgtaacaaaccacccaaattagggttttcataatcgtgtcacgttttt 41976493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 53816072 - 53816007
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  53816072 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 53816007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 54460448 - 54460367
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||   ||||||| |||||||||||    
T  54460448 ttttcttgttgcttaagattgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 54460367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 245 - 325
Target Start/End: Complemental strand, 9380092 - 9380012
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatc 325  Q
    |||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||||||   ||||||| ||||||||||    
T  9380092 ttttcttattgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgactgtcatc 9380012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 19302295 - 19302365
Alignment:
Q  257 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| || |||||| |||| |||||||    
T  19302295 ttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatatgaaatgacggactatcatcac 19302365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 28266161 - 28266099
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  28266161 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 28266099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 11190771 - 11190706
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||    
T  11190771 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacctattctt 11190706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 11785010 - 11784945
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||| | ||||||||||||||| | ||||| ||||||||||||||||||||||||||||    
T  11785010 agagagatgaacttaggtctttcgaatcatcgatgttcccctaattggtatactgcacatattctt 11784945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 16184637 - 16184702
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| |||||||    
T  16184637 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattctt 16184702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 31548810 - 31548753
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  31548810 ttctgccttgtgtaacaaaccaccaaaattagggtttccataatcgtgtcacgttttt 31548753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 35751696 - 35751628
Alignment:
Q  75 agaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcac 143  Q
    |||||||||| |||||||||| |||||||||||||||||| | ||||| |||||||| |||||||||||    
T  35751696 agaaaatatggagagagatgagatcaggtctttcgaatcatcgatgttcccctaatttgtatactgcac 35751628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 245 - 327
Target Start/End: Complemental strand, 3839874 - 3839789
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcat---aaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||||||||||||| |||||||||||| |||||||||||||   ||||| |||||||||||   ||||||| ||||||||||||    
T  3839874 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcattaaaaaaaaactctaaaaatagtgaatgactgactgtcatcac 3839789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 47051740 - 47051677
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| ||||||| |||||| ||||||||||||| |||||    
T  47051740 agagagatgagatcaggtctttcgaatcatctatgttcccctaactggtatactgcacctattc 47051677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 50461498 - 50461561
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  50461498 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 50461561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 245 - 304
Target Start/End: Original strand, 54736769 - 54736828
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 304  Q
    |||||||| ||||||| |||||||||||| |||||| |||||||||||||||||||||||    
T  54736769 ttttcttgttgcttaagcttgcttgtgaactcaaaagtatcataaaaagactctaaaaat 54736828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 6434728 - 6434790
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    |||||||||| || ||||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  6434728 agagagatgagattaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 6434790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 539071 - 539006
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| || |||||||||||||||  ||||||||||||||||||||||| ||| |||||||    
T  539071 agagagatgagattaggtctttcgaatcatatatgtttccctaattggtatactacacctattctt 539006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 6445513 - 6445577
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttttct 250  Q
    ||||||| ||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||    
T  6445513 aatcgtgacacgtttttcagtaatcgtgacacgatgccctcttttcagtttcttcagttttttct 6445577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 17528711 - 17528776
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| || ||||| ||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  17528711 agagagatgagattaggtcgttcgaatcatctatgttcccctaattgatatactgcacatattctt 17528776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 19305470 - 19305547
Alignment:
Q  249 cttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||| || |||||  || ||||||||    
T  19305470 cttgctgtttaagcttgcttgtgaactcaaaaatattataaaaagactctaaaaatatgaaatgatggattgtcatca 19305547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 22416784 - 22416849
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  22416784 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacttattctt 22416849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 27092138 - 27092073
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| | |||||  ||||||||||||||||||| |||||||    
T  27092138 agagagatgagatcaggtctttcgaatcatcgatgttctcctaattggtatactgcacctattctt 27092073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 37408925 - 37408860
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  37408925 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 37408860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 43809824 - 43809767
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcac 143  Q
    |||||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||    
T  43809824 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcac 43809767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 46885184 - 46885119
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  46885184 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 46885119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 54723986 - 54723921
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||| ||||||| ||||||| || ||||||||||||||||| |||||||    
T  54723986 agagagatgagatcaggtcttccgaatcatctatgttcccataattggtatactgcacctattctt 54723921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 10885087 - 10885036
Alignment:
Q  100 aggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  10885087 aggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 10885036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 16243425 - 16243374
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    ||||||||||||||||||||||||| || |||||||||||||||| ||||||    
T  16243425 cttgtgtaacaaaccacccaaattaggggttccataatcgtgtcatgttttt 16243374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 29344513 - 29344567
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgtt 201  Q
    ||||||||||||||||||||| || |||||| ||||||||||||| |||||||||    
T  29344513 ttcttccttgtgtaacaaacctccaaaattagggtttccataatcatgtcacgtt 29344567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 12561184 - 12561249
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| ||||||||| |||||||||| |||||||    
T  12561184 agagagatgagtttaggtctttcgaatcatctatgttcccctaattgatatactgcacctattctt 12561249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 17546132 - 17546040
Alignment:
Q  55 tagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    ||||||||| | ||||  |||||||||||| |||||||||| ||||| |||||||||||  ||  ||| |||||||||||||||||||| ||||    
T  17546132 tagaaaataaatatttgattagaaaatatggagagagatgagatcagatctttcgaatcttct-ggttcccctaattggtatactgcacctatt 17546040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 28008021 - 28008086
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| || ||||||||||||||| ||||||| ||| |||| ||||||||||| |||||||    
T  28008021 agagagatgagattaggtctttcgaatcatctatgttccccaaatttgtatactgcacctattctt 28008086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 52990944 - 52990879
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| ||||||||||||||| |||| |||||||    
T  52990944 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtataccgcacctattctt 52990879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 54720215 - 54720150
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| |||||||||| ||||||||||| ||||| |||||||    
T  54720215 agagagatgagtttaggtctttcgaatcatctatgtttccataattggtatattgcacctattctt 54720150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 3293591 - 3293643
Alignment:
Q  152 ccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||| ||||||||||||||||||| |||||||  |||||||||||||||||    
T  3293591 ccttgtataacaaaccacccaaattagggtttcctgaatcgtgtcacgttttt 3293643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 142
Target Start/End: Original strand, 32367096 - 32367136
Alignment:
Q  102 gtctttcgaatcacctatgtttccctaattggtatactgca 142  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  32367096 gtctttcgaatcatctatgtttccctaattggtatactgca 32367136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 3840067 - 3840016
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||| | | |||| ||||||||||||||||||||||||||    
T  3840067 cttgtgtaacaaaccatctacattagggtttccataatcgtgtcacgttttt 3840016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 505
Target Start/End: Original strand, 45967990 - 45968101
Alignment:
Q  395 ccaacaccacattcttaataatgcactattaaactccctaattctcctca-ccccaaaccaccaacctcctttctcaaacaaacaggattccagtcaacc 493  Q
    |||||||||| | |||||||| ||| | |||||||||||||||||||| | |||||||| |||||||||||  |||  ||||| ||  | ||||||||||    
T  45967990 ccaacaccacttccttaataaagcaatgttaaactccctaattctccttatccccaaactaccaacctcctgactccgacaaatagactgccagtcaacc 45968089  T
Q  494 caagttattttt 505  Q
    ||| | ||||||    
T  45968090 caaatgattttt 45968101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 47055170 - 47055107
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| ||||||| || ||| | ||||||||||| |||||    
T  47055170 agagagatgagatcaggtctttcgaatcatctatgttcccataactagtatactgcacctattc 47055107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 327
Target Start/End: Complemental strand, 10884094 - 10884017
Alignment:
Q  250 ttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||| |||| |||||||||||| |||||| |||||| |||||||||||||||||   ||||||| ||||||||||||    
T  10884094 ttgctgtttaaacttgcttgtgaactcaaaa-tatcatgaaaaagactctaaaaatagtgaatgactgactgtcatcac 10884017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 327
Target Start/End: Original strand, 23299477 - 23299554
Alignment:
Q  250 ttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||| |||| |||||||||||| |||||| |||||| |||||||||||||||||   ||||||| ||||||||||||    
T  23299477 ttgctgtttaaacttgcttgtgaactcaaaa-tatcatgaaaaagactctaaaaatagtgaatgactgactgtcatcac 23299554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 465
Target Start/End: Complemental strand, 25844806 - 25844736
Alignment:
Q  395 ccaacaccacattcttaataatgcactattaaactccctaattctcctcaccccaaaccaccaacctcctt 465  Q
    |||||||||| | | || ||| |||| ||| ||||||||||||||| | ||||||||||||||||||||||    
T  25844806 ccaacaccacttccctagtaacgcacaattgaactccctaattctcattaccccaaaccaccaacctcctt 25844736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 151
Target Start/End: Original strand, 30219943 - 30220020
Alignment:
Q  73 ttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||| ||||||| ||||||||| |||| ||||||||||||| ||| ||| |||||||||||  ||||||| |||||||    
T  30219943 ttagagaatatga-gagagatgagatcatgtctttcgaatcatctaagttcccctaattggtcaactgcacctattctt 30220020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 251
Target Start/End: Complemental strand, 54460525 - 54460460
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttttctt 251  Q
    ||||||| |||| |||| ||||||||||||||||||||   ||||||| |||||||||||||||||    
T  54460525 aatcgtgacacgctttttagtaatcgtgacacgatgcccacttttcagtttcttcagttttttctt 54460460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 55031947 - 55032009
Alignment:
Q  87 gagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    ||||||||| |  ||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  55031947 gagagatgagactaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 55032009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 55034807 - 55034869
Alignment:
Q  87 gagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    ||||||||| |  ||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  55034807 gagagatgagactaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 55034869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 10881035 - 10880978
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||| |||||| |||||||| ||  |||||| ||||||||||||||||||||||||||    
T  10881035 ttctgccttgtttaacaaacaactgaaattagggtttccataatcgtgtcacgttttt 10880978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 17531606 - 17531671
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||| ||||||||| ||||||| | |||||||||||||||||| |||||||    
T  17531606 agagagatgagtttaggtcgttcgaatcatctatgttcctctaattggtatactgcacctattctt 17531671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 23298565 - 23298630
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| || ||||||||||||||| ||| ||| || |||||||||| |||||| |||||||    
T  23298565 agagagatgagattaggtctttcgaatcatctaagttcccttaattggtatgctgcacctattctt 23298630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 25442809 - 25442874
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | |||||||||||||||  |||||| |||||||||||||| ||||| |||||||    
T  25442809 agagagatgagtttaggtctttcgaatcatttatgttcccctaattggtatattgcacctattctt 25442874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 10106551 - 10106614
Alignment:
Q  87 gagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||| |  |||||||| |||||| |||||||||| ||||||||||||||||| |||||||    
T  10106551 gagagatgagactaggtcttttgaatcatctatgtttcc-taattggtatactgcacctattctt 10106614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 18641723 - 18641787
Alignment:
Q  87 gagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||| |  ||||||||||| ||| | ||||| |||||||||||||||||||| |||||||    
T  18641723 gagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctattctt 18641787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 18644719 - 18644783
Alignment:
Q  87 gagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||| |  ||||||||||| ||| | ||||| |||||||||||||||||||| |||||||    
T  18644719 gagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctattctt 18644783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 465
Target Start/End: Complemental strand, 18689454 - 18689342
Alignment:
Q  353 caacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctcaccccaaac 452  Q
    |||||||||| |||| ||||||||||| ||   ||||| ||||||||||||  | ||||  |   || ||||||||||| |||||||||  ||| |||||    
T  18689454 caacaccctaaaccataaactctccttctccaccaacaaccgccaacaccatttccttagaagaacaatattaaactccttaattctccgtaccgcaaac 18689355  T
Q  453 caccaacctcctt 465  Q
    |||||||||||||    
T  18689354 caccaacctcctt 18689342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 19652207 - 19652155
Alignment:
Q  445 ccccaaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaag 497  Q
    ||||||||||||||| ||||| |||| ||||||||  ||||||||||||||||    
T  19652207 ccccaaaccaccaacttccttactcatacaaacagagttccagtcaacccaag 19652155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 22783859 - 22783819
Alignment:
Q  73 ttagaaaatatgaagagagatgaaatcaggtctttcgaatc 113  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  22783859 ttagaaaatatggagagagatgagatcaggtctttcgaatc 22783819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 22788223 - 22788183
Alignment:
Q  73 ttagaaaatatgaagagagatgaaatcaggtctttcgaatc 113  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  22788223 ttagaaaatatggagagagatgagatcaggtctttcgaatc 22788183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 52200156 - 52200092
Alignment:
Q  87 gagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||| |  |||||||||||||||   ||||| |||||||||||||||||||| |||||||    
T  52200156 gagagatgagactaggtctttcgaatcattgatgttcccctaattggtatactgcacctattctt 52200092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 139
Target Start/End: Complemental strand, 9392967 - 9392925
Alignment:
Q  97 atcaggtctttcgaatcacctatgtttccctaattggtatact 139  Q
    ||||||||||| |||||| ||||||| ||||||||||||||||    
T  9392967 atcaggtcttttgaatcatctatgttcccctaattggtatact 9392925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 222
Target Start/End: Complemental strand, 16243320 - 16243286
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgat 222  Q
    ||||||| |||||||||||||||||||||||||||    
T  16243320 aatcgtgacacgtttttcagtaatcgtgacacgat 16243286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 48064000 - 48064050
Alignment:
Q  101 ggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||| ||||||||| ||||||| |||||||||||||||||||  |||||||    
T  48064000 ggtcgttcgaatcatctatgttcccctaattggtatactgcatctattctt 48064050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 52250689 - 52250647
Alignment:
Q  331 cctcctcaccatatttcgcaaccaacaccctataccacaaact 373  Q
    |||||||||||||| |||| ||||||||||||||||| |||||    
T  52250689 cctcctcaccatatctcgccaccaacaccctataccataaact 52250647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 326
Target Start/End: Complemental strand, 538091 - 538015
Alignment:
Q  250 ttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||| |||| |||| ||||||| |||||| |||||| |||||||||||||||||   ||||||| |||||||||||    
T  538091 ttgctgtttaaacttgtttgtgaactcaaaa-tatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 538015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 326
Target Start/End: Complemental strand, 6921966 - 6921890
Alignment:
Q  250 ttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||| |||| |||||||||||| |||||| |||||| |||||| ||||||||||   ||||||| |||||||||||    
T  6921966 ttgctgtttaaacttgcttgtgaactcaaaa-tatcatgaaaaaggctctaaaaatagtgaatgactgactgtcatca 6921890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 17039972 - 17040037
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||| |||| |||||||||||||||||| | ||||| || ||||||||||||  ||| |||||||    
T  17039972 agagaaatgagatcaggtctttcgaatcatcgatgttcccttaattggtatacaacacttattctt 17040037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 17141652 - 17141587
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | |||||||| |||| | ||||||| |||||||||||||| ||||| |||||||    
T  17141652 agagagatgagcttaggtcttttgaattatctatgttcccctaattggtatattgcacctattctt 17141587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 465
Target Start/End: Original strand, 25132771 - 25132816
Alignment:
Q  421 tattaaactccctaattctcctca-ccccaaaccaccaacctcctt 465  Q
    |||||||||| ||||||||||| | |||||||||||||||||||||    
T  25132771 tattaaactctctaattctccttagccccaaaccaccaacctcctt 25132816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 28265149 - 28265112
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc 225  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  28265149 aatcgtgacacatttttcagtaatcgtgacacgatgcc 28265112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 34983803 - 34983868
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||| | ||||||| |||| |||||||||| |||| |||||||    
T  34983803 agagagatgagtttaggtctttcgaatgatctatgttcccctgattggtataccgcacctattctt 34983868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 3839962 - 3839930
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacg 220  Q
    ||||||| |||||||||||||||||||||||||    
T  3839962 aatcgtgacacgtttttcagtaatcgtgacacg 3839930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 18542811 - 18542771
Alignment:
Q  73 ttagaaaatatgaagagagatgaaatcaggtctttcgaatc 113  Q
    ||||||||||| ||||||||||| |||| ||||||||||||    
T  18542811 ttagaaaatataaagagagatgagatcatgtctttcgaatc 18542771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 331 - 367
Target Start/End: Original strand, 19875818 - 19875854
Alignment:
Q  331 cctcctcaccatatttcgcaaccaacaccctatacca 367  Q
    |||||||||||||| |||| |||||||||||||||||    
T  19875818 cctcctcaccatatctcgccaccaacaccctatacca 19875854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 35412753 - 35412689
Alignment:
Q  87 gagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||| |  ||||||||||| ||| | ||||| | |||||||||||||||||| |||||||    
T  35412753 gagagatgagactaggtctttcgagtcatcaatgttcctctaattggtatactgcacctattctt 35412689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 4e-52; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 354 - 516
Target Start/End: Complemental strand, 40681826 - 40681662
Alignment:
Q  354 aacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctcacccca-aac 452  Q
    |||||||||||||||||||||||||||||| |||||| | ||||||||||| | | |||||||||||||||||||||||||||||||||||||||| |||    
T  40681826 aacaccctataccacaaactctccttttcaatcaacaactgccaacaccacttccctaataatgcactattaaactccctaattctcctcaccccataac 40681727  T
Q  453 caccaacctcctttctcaaacaaacaggattccagtcaacccaagtta-ttttttgtggtcgtca 516  Q
    ||||||||||||| ||||||||||||  |||||| ||||||||||||| ||||||||||| ||||    
T  40681726 caccaacctccttactcaaacaaacaaaattccaatcaacccaagttacttttttgtggttgtca 40681662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 4595903 - 4596042
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||||| |||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  4595903 atttgattgcataaaattaaataacataaaataaagattcggttagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaa 4596002  T
Q  112 tcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||| ||||||| |||||||||||||||| |||||||||||    
T  4596003 tcatctatgttcccctaattggtatacttcacatattctt 4596042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 17731038 - 17730895
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  |||  |||||||||||||||||| |||||||||||||||||||||||| |||| ||||||    
T  17731038 tttgatttgattgcataaaattaaataacataaaataaagattcagttagaaaatatagatttggttagaaaatatgaagagagatgagatcatgtcttt 17730939  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| |||||||||||||||||||||||||||| |||||||    
T  17730938 cgaatcatctatgtttccctaattggtatactgcacctattctt 17730895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 26557723 - 26557580
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  ||| |||| |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  26557723 tttgatttgattgcataaaattaaataacataaaataaagattcggtttgaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttt 26557624  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||| ||| |||||||||||||||||||||||||||| |||||||    
T  26557623 cgagtcatctatgtttccctaattggtatactgcacctattctt 26557580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 6 - 151
Target Start/End: Original strand, 11919753 - 11919898
Alignment:
Q  6 attttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtct 105  Q
    |||||||||||||||| |||||||||||||||||||||||  ||   || ||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  11919753 attttgatttgattgcataaaattaaataacataaaataaagatcgagtaagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtct 11919852  T
Q  106 ttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||| ||||||| |||||||||||||||| ||| |||||||    
T  11919853 ttcgaatcatctatgttcccctaattggtatactacacctattctt 11919898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 4695705 - 4695562
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| || ||||||||||||||||||||  ||| |||| |||||||||||||||||||||||||||||| |||||||| | |||||||||    
T  4695705 tttgatttgattgcatacaattaaataacataaaataaagattcggtttgaaaatatagatttagttagaaaatatgaaaagagatgagaccaggtcttt 4695606  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| |||| || |||||||||||||||||||| |||||||    
T  4695605 cgaatcatctatattcccctaattggtatactgcacctattctt 4695562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 4543017 - 4542878
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||||| |||||||||||||||||||||||  |||   ||| ||||||||||||| |||||||||||||||||||||||| |||||||||| ||||    
T  4543017 atttgattgcataaaattaaataacataaaataaagattgatttaaaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttccgaa 4542918  T
Q  112 tcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||| ||||||| |||||||||||||||||||| |||||||    
T  4542917 tcatctatgttcccctaattggtatactgcacctattctt 4542878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 4547089 - 4546950
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||||| |||||||||||||||||||||||  |||   ||| ||||||||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  4547089 atttgattgcataaaattaaataacataaaataaagattgatttaaaaaatatagatttggttagaaaatatgaagagggatgagatcaggtctttcgaa 4546990  T
Q  112 tcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||| ||||||||||||||||| |||||||||| |||||||    
T  4546989 tcatctatgtttccctaattgatatactgcacctattctt 4546950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 188 - 304
Target Start/End: Complemental strand, 4694871 - 4694745
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcct-ttttcagcttcttcagtt---------ttttcttgctgcttaatcttgcttgtgaattca 277  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||| |||    
T  4694871 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttttcagcttcttcagttttttcttacttttcttgctgcttaatcttgcttgtgaactca 4694772  T
Q  278 aaaatatcataaaaagactctaaaaat 304  Q
    ||||||||||| |||||||||||||||    
T  4694771 aaaatatcatagaaagactctaaaaat 4694745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 8277207 - 8277067
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaa-taattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcga 110  Q
    |||||||||  |||||||||||||||||||| |||  |||  || ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  8277207 atttgattgaataaaattaaataacataaaaataaagattgagtaagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcga 8277108  T
Q  111 atcacctatgtttccctaattggtatactgcacatattctt 151  Q
    | || ||||||| |||||||||||||| ||||| |||||||    
T  8277107 agcatctatgttcccctaattggtataatgcacctattctt 8277067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 35961322 - 35961172
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctt- 106  Q
    |||||||||||||| |||||||||||||||||||||||  ||| ||||||||||||||||| | |||| ||||||||||||||||||| ||||||||||     
T  35961322 tttgatttgattgcataaaattaaataacataaaataaagattcggttagaaaatatagatgtggttataaaatatgaagagagatgagatcaggtcttt 35961223  T
Q  107 ------tcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
          |||||||| ||||||| | |||||||||||||||||| |||||||    
T  35961222 cgactttcgaatcatctatgttcctctaattggtatactgcacctattctt 35961172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 9271378 - 9271498
Alignment:
Q  31 aataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaat 130  Q
    ||||| || ||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||| |||||| ||||||| |||||||    
T  9271378 aataaaattaaataacgattcggttagaaaatatagatttggttagaaaatatgaagagagatgagaacaggtatttagaatcatctatgttcccctaat 9271477  T
Q  131 tggtatactgcacatattctt 151  Q
    ||||||||||||| |||||||    
T  9271478 tggtatactgcacctattctt 9271498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 188 - 326
Target Start/End: Original strand, 9865494 - 9865642
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattca 277  Q
    ||||||||||||||||||| ||||||||||||||| |   |||||||  |||||||||||||        |||||||||||||||||||||||||| |||    
T  9865494 aatcgtgtcacgtttttcaataatcgtgacacgatcctcttttttcattttcttcagtttttcttgcttttcttgctgcttaatcttgcttgtgaactca 9865593  T
Q  278 aaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||||||||||||||||   ||||||| |||||||||||    
T  9865594 aaaatatcataaaaagactctaaaaatagcgaatgactgactgtcatca 9865642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 188 - 327
Target Start/End: Original strand, 45287989 - 45288139
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcctt--tttcagcttcttcagttttt---------tcttgctgcttaatcttgcttgtgaattc 276  Q
    ||||||| |||||||||||||||| |||||||||||||||  |||||| |||||||| ||||         ||||||||||||| |||||||||||| ||    
T  45287989 aatcgtgacacgtttttcagtaattgtgacacgatgccttcttttcagtttcttcagctttttcttgtttttcttgctgcttaagcttgcttgtgaactc 45288088  T
Q  277 aaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    ||||||||||||||||||||||||||||   ||||||| ||||||||||||    
T  45288089 aaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatcac 45288139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 20594430 - 20594344
Alignment:
Q  65 agatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  20594430 agatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacgtattctt 20594344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 8276093 - 8276012
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8276093 ttttcttgctgcttgagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatatggaatgacagactgtcatca 8276012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 244 - 326
Target Start/End: Original strand, 45291392 - 45291474
Alignment:
Q  244 tttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||   ||||||| |||||||||||    
T  45291392 tttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 45291474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 9864680 - 9864757
Alignment:
Q  72 gttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||||| ||||||||||||||||| ||| |||||    
T  9864680 gttagaaaatatgaagagagatgagatcaggtctttcaaatcatctatgtatccctaattggtatactacacctattc 9864757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 245 - 326
Target Start/End: Original strand, 20081559 - 20081640
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||   ||||||| |||||||||||    
T  20081559 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaacactctaaaaatagtgaatgactgactgtcatca 20081640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 23224873 - 23224938
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23224873 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacatattctt 23224938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 413 - 512
Target Start/End: Original strand, 14316441 - 14316541
Alignment:
Q  413 taatgcactattaaactccctaattctcctcacccc-aaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaagttattttttgtggt 511  Q
    |||||||  ||||||||| ||||||||||| ||||| ||||||||||||||||| |||||||| |||| |||| | |||||||||| |||||||||||||    
T  14316441 taatgcaaaattaaactctctaattctccttacccccaaaccaccaacctccttactcaaacagacagaattctaatcaacccaagatattttttgtggt 14316540  T
Q  512 c 512  Q
    |    
T  14316541 c 14316541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 9273953 - 9274035
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||||| ||||||| |||||||||||| || ||||||||||||||||||| | |||||||| |||||| ||||||||||||    
T  9273953 ttttcttggtgcttaagcttgcttgtgaactccaaaatatcataaaaagactttgaaaatgtgaaatgacggactgtcatcac 9274035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 326
Target Start/End: Complemental strand, 9080525 - 9080376
Alignment:
Q  188 aatcgtgtcacgtttttcagt-aatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattc 276  Q
    ||||||| ||||||||||||| ||| |||||||||||||  ||||| || |||||||||||||        ||||||||||||| |||||||||||| ||    
T  9080525 aatcgtgacacgtttttcagttaatagtgacacgatgccctttttttagtttcttcagtttttcttggttttcttgctgcttaagcttgcttgtgaactc 9080426  T
Q  277 aaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||||||  ||||||||||||||||||||   |||||||  ||||||||||    
T  9080425 aaaaattacataaaaagactctaaaaataacgaatgactaactgtcatca 9080376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 17730054 - 17729973
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||   ||| ||| |||||||||||    
T  17730054 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaggactctaaaaatagtgaaagactgactgtcatca 17729973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 37415391 - 37415456
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  37415391 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 37415456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 45287037 - 45287102
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  45287037 agagagatgagattaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 45287102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 4596843 - 4596925
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||||| ||||||||||| |||||||  ||||||||||||||||||||||||||||||   ||||||  ||||||||||||    
T  4596843 ttttcttgttgcttaatctttcttgtgagctcaaaaatatcataaaaagactctaaaaataacgaatgattgactgtcatcac 4596925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 14683411 - 14683477
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||  |||||||    
T  14683411 aagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattctt 14683477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 4694982 - 4694925
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||    
T  4694982 ttcttccttgtgtaagaaaccacccaaattagggtttccataattgtgtcacgttttt 4694925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 9865383 - 9865440
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||    
T  9865383 ttcttccttgtgtaacaaaccaccaaaattagggtttccataatcgtgtcacattttt 9865440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 45290448 - 45290513
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| || ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  45290448 agagagatgagattaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 45290513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 9132742 - 9132793
Alignment:
Q  100 aggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  9132742 aggtctttcgaatcatctatgttcccctaattggtatactgcacatattctt 9132793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 10344697 - 10344638
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 304  Q
    |||||||||||||||| |||||||||||| |||||||| |||||| ||||||||||||||    
T  10344697 ttttcttgctgcttaagcttgcttgtgaactcaaaaatttcataagaagactctaaaaat 10344638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 17730268 - 17730217
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  17730268 cttgtgtaacaaaccacctaaattagggtttccataatcgtgtcacgttttt 17730217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 9273779 - 9273833
Alignment:
Q  150 ttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  9273779 ttccttgtgtaacaaaccactcaaattagggtttccgtaatcgtgtcacgttttt 9273833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 16165895 - 16165833
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    |||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| ||||    
T  16165895 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctatt 16165833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 10345341 - 10345276
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  10345341 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 10345276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 26136096 - 26136161
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  26136096 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 26136161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 26144476 - 26144541
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  26144476 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 26144541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 37166115 - 37166180
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||| | |||||||||||||||  |||||| |||||||||||||||||||| |||||||    
T  37166115 agagagatgaatttaggtctttcgaatcatttatgttcccctaattggtatactgcacctattctt 37166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 2441237 - 2441309
Alignment:
Q  77 aaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||| | |||||||||| |||||||||||||||||| | |||||  ||||||||||||||||||| |||||    
T  2441237 aaaataaggagagagatgagatcaggtctttcgaatcatcgatgttctcctaattggtatactgcacctattc 2441309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 472
Target Start/End: Complemental strand, 16559213 - 16559093
Alignment:
Q  353 caacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctcacccc-aaa 451  Q
    |||||||||| |||||||||| ||| | ||   ||||| || |||||||||| ||| |||||  ||| ||||||| || ||||||||||| ||||| |||    
T  16559213 caacaccctaaaccacaaactatccctatctaccaacaacctccaacaccactttcctaatagagcattattaaattctctaattctccttacccccaaa 16559114  T
Q  452 ccaccaacctcctttctcaaa 472  Q
    |||||||||||||| ||||||    
T  16559113 ccaccaacctccttactcaaa 16559093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 472
Target Start/End: Original strand, 16606449 - 16606569
Alignment:
Q  353 caacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctcacccc-aaa 451  Q
    |||||||||| |||||||||| ||| | ||   ||||| || |||||||||| ||| |||||  ||| ||||||| || ||||||||||| ||||| |||    
T  16606449 caacaccctaaaccacaaactatccctatctaccaacaacctccaacaccactttcctaatagagcattattaaattctctaattctccttacccccaaa 16606548  T
Q  452 ccaccaacctcctttctcaaa 472  Q
    |||||||||||||| ||||||    
T  16606549 ccaccaacctccttactcaaa 16606569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 9080630 - 9080579
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    ||||||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  9080630 cttgtgtaacaaaccacacaaattagggtttccataattgtgtcacgttttt 9080579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 414 - 504
Target Start/End: Complemental strand, 38153725 - 38153634
Alignment:
Q  414 aatgcactattaaactccctaattctcctcacccc-aaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaagttatttt 504  Q
    |||||| |||||||||| ||||||||||| ||||| ||||||||||||||||| |||  ||||||||  ||||| || ||||||| ||||||    
T  38153725 aatgcaatattaaactcactaattctccttacccccaaaccaccaacctccttactcctacaaacagtgttccaatccacccaagctatttt 38153634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 20080702 - 20080752
Alignment:
Q  102 gtctttcgaatcacctatgtttccctaattggtatactgcacatattcttc 152  Q
    ||||||||||||| ||||||| |||||||||||||||||||| ||||||||    
T  20080702 gtctttcgaatcatctatgttcccctaattggtatactgcacctattcttc 20080752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 3067959 - 3068010
Alignment:
Q  100 aggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||| |||||||    
T  3067959 aggtctttcgaatcatctatgttcccctaattgttatactgcacctattctt 3068010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 6603601 - 6603542
Alignment:
Q  90 agatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||| |||| ||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  6603601 agatgagatcaagtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 6603542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 13449744 - 13449807
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| | |||||||||||||||| | ||| | |||||||||||||||||||| |||||    
T  13449744 agagagatgagaacaggtctttcgaatcatcgatggtcccctaattggtatactgcacctattc 13449807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 13842786 - 13842723
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| | || || || ||||||||||||||||| |||||    
T  13842786 agagagatgagatcaggtctttcgaatcatcgatattcccgtaattggtatactgcacctattc 13842723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 495
Target Start/End: Complemental strand, 27854001 - 27853859
Alignment:
Q  354 aacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctcacc-ccaaac 452  Q
    ||||||||| |||||||||| ||  | || |||||||||| |||||||||| | | |||||| ||   |||||| ||  | |||||||| ||| ||||||    
T  27854001 aacaccctaaaccacaaactatctctctccgtcaacaccctccaacaccacttccctaataaagctaaattaaattcttttattctccttacctccaaac 27853902  T
Q  453 caccaacctcctttctcaaacaaacaggattccagtcaaccca 495  Q
    ||||||||||||  |||  |||||||| |||||| ||||||||    
T  27853901 caccaacctcctgactccgacaaacagaattccaatcaaccca 27853859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 465
Target Start/End: Complemental strand, 34236344 - 34236231
Alignment:
Q  353 caacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattct-taataatgcactattaaactccctaattctcctca-ccccaa 450  Q
    |||||||||| |||||||||||||  | |||  ||||| || |||||||||| |||| ||| || ||   ||||||||||||||||||||| | ||||||    
T  34236344 caacaccctaaaccacaaactctcggtatcacccaacaacctccaacaccac-ttctctaacaacgctaaattaaactccctaattctccttacccccaa 34236246  T
Q  451 accaccaacctcctt 465  Q
    |||||||||||||||    
T  34236245 accaccaacctcctt 34236231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 9864635 - 9864691
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatat 64  Q
    |||||||||||||| ||||||||||||||| |||| ||  ||| |||||||||||||    
T  9864635 tttgatttgattgcataaaattaaataacagaaaagaaagattcggttagaaaatat 9864691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 29375709 - 29375789
Alignment:
Q  386 caacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctca-ccccaaaccaccaacctcctt 465  Q
    ||||| ||||||||||||| | | || ||| ||  |||||||||||||||||||||| | ||||||||| |||||||||||    
T  29375709 caacatccgccaacaccacttccctagtaacgccatattaaactccctaattctccttacccccaaacctccaacctcctt 29375789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 48645603 - 48645555
Alignment:
Q  103 tctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||||| | ||||| |||||||||||||||||||| |||||||    
T  48645603 tctttcgaatcatcgatgttcccctaattggtatactgcacctattctt 48645555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 11398017 - 11398080
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| || ||||||||||| ||| | ||||| ||||||||||||||||| || |||||    
T  11398017 agagagatgagattaggtctttcgattcatcgatgttcccctaattggtatactgtacctattc 11398080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 5242118 - 5242180
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    |||||||||| |||||||||||||||||  ||  ||| || ||||||||||||||||| ||||    
T  5242118 agagagatgagatcaggtctttcgaatcttctgagttcccttaattggtatactgcacctatt 5242180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 373
Target Start/End: Complemental strand, 41805323 - 41805281
Alignment:
Q  331 cctcctcaccatatttcgcaaccaacaccctataccacaaact 373  Q
    |||||||||||||| |||| ||||||||||||||||| |||||    
T  41805323 cctcctcaccatatctcgccaccaacaccctataccaaaaact 41805281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 10469290 - 10469225
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | || |||||||||||| ||||||| |||||||| ||| ||||||| |||||||    
T  10469290 agagagatgagtttagatctttcgaatcatctatgttcccctaattagtacactgcacctattctt 10469225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 13809472 - 13809546
Alignment:
Q  73 ttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccc-taattggtatactgcacatatt 148  Q
    |||||||||||  |||||||||| |||| |||||||||||  ||| || ||||| ||||||||||||||||| ||||    
T  13809472 ttagaaaatatagagagagatgagatcaagtctttcgaat--cctctgattcccttaattggtatactgcacctatt 13809546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 7227704 - 7227613
Alignment:
Q  56 agaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    ||||| || ||||||  |||||||||||| | |||||||  |||||||||||||||||  ||  ||| |||| ||||||||||||||| ||||    
T  7227704 agaaagtaaagattttattagaaaatatggaaagagatgggatcaggtctttcgaatcctct-ggttcccctgattggtatactgcacctatt 7227613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 462
Target Start/End: Original strand, 9095708 - 9095748
Alignment:
Q  423 ttaaactccctaattctcctcaccc-caaaccaccaacctc 462  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  9095708 ttaaattccctaattctcctcaccctcaaaccaccaacctc 9095748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 331 - 367
Target Start/End: Complemental strand, 27218687 - 27218651
Alignment:
Q  331 cctcctcaccatatttcgcaaccaacaccctatacca 367  Q
    |||||||||||||| |||| |||||||||||||||||    
T  27218687 cctcctcaccatatctcgccaccaacaccctatacca 27218651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 248755 - 248612
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  ||| |||||||||||||||||||  ||||||||||||||||||||||| |||||||||||    
T  248755 tttgatttgattgcataaaattaaataacataaaataaagattcggttagaaaatatagatttgattagaaaatatgaagagagatgagatcaggtcttt 248656  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||    
T  248655 cgaatcatctatgttcccctaattggtatactgcacctattctt 248612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 9e-50; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 72 - 204
Target Start/End: Complemental strand, 13137096 - 13136964
Alignment:
Q  72 gttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattcttccttgtgtaacaaaccaccc 171  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||| ||| ||||||||||||| ||||||| |||||    
T  13137096 gttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactacacctattcttccttgtctaacaaatcaccc 13136997  T
Q  172 aaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||| ||||||||||||||||||||||||||    
T  13136996 aaattagggtttccataatcgtgtcacgttttt 13136964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 5666736 - 5666594
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  |||  |||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  5666736 tttgatttgattgcataaaattaaataacataaaataaagattcagttagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttt 5666637  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||| | ||||||| ||||||||||||||||||||||||||||    
T  5666636 cgaat-atctatgttcccctaattggtatactgcacatattctt 5666594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 196 - 326
Target Start/End: Complemental strand, 43723035 - 43722904
Alignment:
Q  196 cacgtttttcagtaatcgtgacacgatgc-ctttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaaga 294  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43723035 cacgtttttcagtaatcgtgacacgatgctctttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaaga 43722936  T
Q  295 ctctaaaaatgtggaatgacagactgtcatca 326  Q
    ||||||||||   ||||||  |||||||||||    
T  43722935 ctctaaaaataacgaatgattgactgtcatca 43722904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 43723919 - 43723776
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  |||  |||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  43723919 tttgatttgattgcataaaattaaataacataaaataaagattcagttagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttt 43723820  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| |||||||||||||| ||||| |||||||    
T  43723819 cgaatcatctatgttcccctaattggtatattgcacctattctt 43723776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 40781687 - 40781548
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||||| |||||||||||||||||||||||  |||  || ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  40781687 atttgattgcataaaattaaataacataaaataaagattgagtaagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaa 40781588  T
Q  112 tcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||| ||||||| |||||||||||||||||||| |||||||    
T  40781587 tcatctatgttcccctaattggtatactgcacctattctt 40781548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 191 - 326
Target Start/End: Complemental strand, 5105086 - 5104953
Alignment:
Q  191 cgtgtcacgtttttcagtaatcgtgacacgatgcc-tttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataa 289  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  5105086 cgtgtcacgtttttcagtaatcgtgacacgatcccctttttcagcttcttcagttttt-cttgctgcttaatcttgcttgtgaactcaaaaatatcataa 5104988  T
Q  290 aaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||| |||||||||| || ||||||| |||||||||||    
T  5104987 aaaaactctaaaaa-gt-gaatgactgactgtcatca 5104953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 6826990 - 6826850
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  |||   ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  6826990 tttgatttgattgcataaaattaaataacataaaataaagattcaattagaaaatatagatttggttagaaaatatgaagatagatgagatcaggtcttt 6826891  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    ||||||| ||||| | |||||||||||||||||||| ||||    
T  6826890 cgaatcatctatgctcccctaattggtatactgcacctatt 6826850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 31585830 - 31585969
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||||| ||||||||||||||| |||||||  |||  || ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  31585830 atttgattgcataaaattaaataacaaaaaataaagattgagtaagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaa 31585929  T
Q  112 tcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||| ||||||| |||||||||||||||||||  |||||||    
T  31585930 tcatctatgttcccctaattggtatactgcatctattctt 31585969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 188 - 326
Target Start/End: Complemental strand, 6826114 - 6825974
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttt--cagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatc 285  Q
    |||||||| ||||||||||||||||||||||||||||||||||  || ||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  6826114 aatcgtgttacgtttttcagtaatcgtgacacgatgcctttttttcatcttcttcagttttttcttgatgcttaatcttgcttgtgaactcaaaaatatc 6826015  T
Q  286 ataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||||||||||| |||| ||   ||||||  |||||||||||    
T  6826014 ataaaaagactttaaatataacgaatgattgactgtcatca 6825974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 12 - 139
Target Start/End: Complemental strand, 15470673 - 15470546
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||| | |||||||||||||||||||||||  |||  || ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  15470673 atttgattacataaaattaaataacataaaataaagattgagtaagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaa 15470574  T
Q  112 tcacctatgtttccctaattggtatact 139  Q
    ||| ||||||| ||||||||||||||||    
T  15470573 tcatctatgttcccctaattggtatact 15470546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 43207778 - 43207919
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaa--tatagatttagttagaaaatatgaagagagatgaaatcaggtctttcg 109  Q
    |||||||||| |||||||||||||||||||||||  |||   ||| ||||  ||||||||| ||||| |||||||||||||||||| |||||||||||||    
T  43207778 atttgattgcataaaattaaataacataaaataaagattgatttaaaaaaaatatagatttggttaggaaatatgaagagagatgagatcaggtctttcg 43207877  T
Q  110 aatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||| ||||||| |||||||||||||||||||  |||||||    
T  43207878 aatcatctatgttcccctaattggtatactgcatctattctt 43207919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 13971830 - 13971923
Alignment:
Q  58 aaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  13971830 aaaatgtagatttggttagaaaatatgaagagagatgatatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 13971923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 188 - 327
Target Start/End: Complemental strand, 3874630 - 3874481
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc-tttttcagcttcttcagttttttcttgct---------gcttaatcttgcttgtgaattca 277  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||| ||||||| ||||||||||||         ||||||||||| ||||||| |||    
T  3874630 aatcgtgacacgtttttcaataatcgtgacacgatgccctttttcagtttcttcaattttttcttgcttttcttgctgcttaatcttgtttgtgaactca 3874531  T
Q  278 aaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||||| ||||||||||||||||||   ||||||| ||||||||||||    
T  3874530 aaaatatcctaaaaagactctaaaaataatgaatgactgactgtcatcac 3874481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 42368600 - 42368740
Alignment:
Q  13 tttgattgcgtaaaattaaataacataaaataattatttggttagaaaata--tagatttagttagaaaatatgaagagagatgaaatcaggtctttcga 110  Q
    ||||||||| |||||||||||||||||||||||  |||   ||| |||| |  ||||||| |||||||||||||||||||||| | |||||||||||| |    
T  42368600 tttgattgcataaaattaaataacataaaataaagattgatttaaaaaaaaaatagatttggttagaaaatatgaagagagataagatcaggtctttcaa 42368699  T
Q  111 atcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||  |||||| |||||||||||||||||||| |||||||    
T  42368700 atcatttatgttcccctaattggtatactgcacctattctt 42368740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 5105896 - 5105805
Alignment:
Q  58 aaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||| |||||| |||||||||||||||||||||||| |||||||||||| ||| | ||||||| |||||||||||||||||||| |||||    
T  5105896 aaaataaagatttggttagaaaatatgaagagagatgagatcaggtctttcaaattatctatgttcccctaattggtatactgcacctattc 5105805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 226 - 326
Target Start/End: Complemental strand, 10600051 - 10599951
Alignment:
Q  226 tttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatc 325  Q
    ||||||||||| |||   ||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||   ||||||| ||||||||||    
T  10600051 tttttcagctttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagattctaaaaatagtgaatgactgactgtcatc 10599952  T
Q  326 a 326  Q
    |    
T  10599951 a 10599951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 192 - 304
Target Start/End: Complemental strand, 13136906 - 13136784
Alignment:
Q  192 gtgtcacgtttttcagtaatcgtgacacgatgccttttt-cagcttcttcagttttttcttgct---------gcttaatcttgcttgtgaattcaaaaa 281  Q
    |||||| |||||||||||||| |||||| |||| ||||| ||||||||||||||||||||||||         ||||||||||| ||||||| |||||||    
T  13136906 gtgtcatgtttttcagtaatcatgacacaatgctttttttcagcttcttcagttttttcttgcttttcttgctgcttaatcttgtttgtgaactcaaaaa 13136807  T
Q  282 tatcataaaaagactctaaaaat 304  Q
    |||||||||| ||||||||||||    
T  13136806 tatcataaaatgactctaaaaat 13136784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 13972732 - 13972814
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||   ||||||  ||||||||||||    
T  13972732 ttttcttgctgcttaatcttgtttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgattgactgtcatcac 13972814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 9185388 - 9185453
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  9185388 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacatattctt 9185453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 25959651 - 25959717
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  25959651 aagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 25959717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 6826225 - 6826168
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  6826225 ttcttccttgtgtaacaaaccacccaaattagggtttccataattgtgtcacgttttt 6826168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 9188616 - 9188681
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  9188616 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 9188681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 29440636 - 29440571
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  29440636 agagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactgcacctattctt 29440571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 37279640 - 37279705
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  37279640 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 37279705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 3875414 - 3875363
Alignment:
Q  100 aggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3875414 aggtctttcgaatcacctatgttcccctaattggtatactgcacatattctt 3875363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 251 - 326
Target Start/End: Complemental strand, 5665905 - 5665830
Alignment:
Q  251 tgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||   ||||||  |||||||||||    
T  5665905 tgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgattgactgtcatca 5665830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 22021209 - 22021144
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| || ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  22021209 agagagatgagataaggtctttcgaatcatctatgttaccctaattggtatactgcacctattctt 22021144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 25139971 - 25140040
Alignment:
Q  257 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||| ||| |||||||| |||||||||||||||||| ||||||||| ||||||||||| |||||||||||    
T  25139971 ttaagcttacttgtgaactcaaaaatatcataaaaaaactctaaaattgtggaatgactgactgtcatca 25140040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 25874322 - 25874257
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||| |||||||    
T  25874322 agagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactacacctattctt 25874257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 45493120 - 45493185
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| ||||||| |||||| ||| |||||||||||||||||||||||||||| |||||||    
T  45493120 agagagatgagatcaggtttttcgagtcatctatgtttccctaattggtatactgcacctattctt 45493185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 45500862 - 45500927
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| ||||||| |||||| ||| |||||||||||||||||||||||||||| |||||||    
T  45500862 agagagatgagatcaggtttttcgagtcatctatgtttccctaattggtatactgcacctattctt 45500927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 5666109 - 5666058
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  5666109 cttgtgtaacaaaccacctaaattagggtttccataatcgtgtcacgttttt 5666058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 31427505 - 31427568
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  31427505 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 31427568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 496
Target Start/End: Original strand, 21579667 - 21579769
Alignment:
Q  395 ccaacaccacattcttaataatgcactattaaactccctaattctcctcaccc-caaaccaccaacctcctttctcaaacaaacaggattccagtcaacc 493  Q
    |||||||||| | | |||||| |||||||||||||||||||||||||| |||| |||||||||||||| ||  |||  |||||||| || ||| ||||||    
T  21579667 ccaacaccacttccctaataaagcactattaaactccctaattctccttaccctcaaaccaccaaccttctgactccgacaaacagaatgccaatcaacc 21579766  T
Q  494 caa 496  Q
    |||    
T  21579767 caa 21579769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 25138866 - 25138960
Alignment:
Q  58 aaaatatagatttagttagaaaatatga-agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||| ||||||  || |||||||| | |||||||||| |||||||||||||||| | | || ||||||||||||||||||||||| |||||||    
T  25138866 aaaataaagatttgtttggaaaatataagagagagatgagatcaggtctttcgaattatcgatatttccctaattggtatactgcacctattctt 25138960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 1386386 - 1386451
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  1386386 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacttattctt 1386451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 3874741 - 3874684
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||| ||||||||||||    
T  3874741 ttctgccttgtgtaacaaaccaccaaaattagggtttccataatcatgtcacgttttt 3874684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 8888777 - 8888712
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| || ||||||||| ||||| ||||||| |||||||||||||||||||| |||||||    
T  8888777 agagagatgagattaggtctttcaaatcatctatgttcccctaattggtatactgcacctattctt 8888712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 11347863 - 11347924
Alignment:
Q  90 agatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||  |||||||    
T  11347863 agatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcatctattctt 11347924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 12219937 - 12219872
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  12219937 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 12219872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 24235233 - 24235172
Alignment:
Q  90 agatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||| |||||||||||||||| | ||||||| |||||||||||||||||||| |||||||    
T  24235233 agatgagatcaggtctttcgaattatctatgttcccctaattggtatactgcacctattctt 24235172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 24238505 - 24238444
Alignment:
Q  90 agatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||| |||||||||||||||| | ||||||| |||||||||||||||||||| |||||||    
T  24238505 agatgagatcaggtctttcgaattatctatgttcccctaattggtatactgcacctattctt 24238444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 25870925 - 25870860
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||||||||| || ||| |||||||    
T  25870925 agagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatgctacacctattctt 25870860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 30926713 - 30926621
Alignment:
Q  55 tagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    |||||| || ||||||  |||||||||||  ||||||||||||||||||||||||||||  ||  ||||||||||||| |||||||||| ||||    
T  30926713 tagaaagtaaagatttgattagaaaatatagagagagatgaaatcaggtctttcgaatcctct-ggtttccctaattgatatactgcacctatt 30926621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 5105923 - 5105871
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatat 64  Q
    |||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  5105923 atttgattgcataaaattaaataacataaaataaagatttggttagaaaatat 5105871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 33310808 - 33310752
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgca 142  Q
    |||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||    
T  33310808 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgca 33310752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 45457303 - 45457240
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| ||| ||| ||||||||| |||||||||| |||||    
T  45457303 agagagatgagatcaggtctttcgaatcatctaagttcccctaattgttatactgcacctattc 45457240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 16790721 - 16790783
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  16790721 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 16790783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 30274731 - 30274797
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||| | || ||||||||||||| |||||||  ||||||||||||||||||| |||||||    
T  30274731 aagagagatgagagcatgtctttcgaatcatctatgttctcctaattggtatactgcacctattctt 30274797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 9966333 - 9966398
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||| |||||| |||||| ||||||| |||||||||||||| ||||| |||||||    
T  9966333 agagagatgagatcaagtcttttgaatcatctatgttcccctaattggtatattgcacctattctt 9966398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 25138835 - 25138892
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatata 65  Q
    |||||||||||||| |||||||||||||||||||||||  ||||| || |||||||||    
T  25138835 tttgatttgattgcataaaattaaataacataaaataaagatttgtttggaaaatata 25138892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 27266930 - 27266865
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||| ||||| ||||||| |||||||||||||| ||||  |||||||    
T  27266930 agagagatgagatcaggtctttcaaatcatctatgttcccctaattggtataatgcagctattctt 27266865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 38014705 - 38014636
Alignment:
Q  257 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||| |||||||||||| |||||| |||||||||||||||||||||||    |||||| |||||||||||    
T  38014705 ttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactgactgtcatca 38014636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 40259103 - 40259168
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||| ||||||||| ||||||| |||||||||||||||||||| |||||||    
T  40259103 agagagatgagtttaggtcgttcgaatcatctatgttcccctaattggtatactgcacctattctt 40259168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 5105180 - 5105124
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgtttt 203  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||  |||||||    
T  5105180 ttcttccttgtgtaacaaacaaccaaaattagggtttccataatcgtgctacgtttt 5105124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 329
Target Start/End: Complemental strand, 16788469 - 16788386
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcacct 329  Q
    |||||||| ||||||| |||||||||||| |||||| |||||| |||||| |||||||||    |||||| ||||||||||||||    
T  16788469 ttttcttgttgcttaagcttgcttgtgaactcaaaattatcat-aaaagattctaaaaatagcaaatgactgactgtcatcacct 16788386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 43723154 - 43723098
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgtttt 203  Q
    |||| |||| ||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  43723154 ttctgccttctgtaacaaaccacccaaattagggttcccataattgtgtcacgtttt 43723098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 16179254 - 16179203
Alignment:
Q  100 aggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||||||| | ||||| ||||||||||||||||||| ||||||||    
T  16179254 aggtctttcgaatcatcgatgttcccctaattggtatactgcatatattctt 16179203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 304
Target Start/End: Original strand, 31430569 - 31430616
Alignment:
Q  257 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 304  Q
    |||| |||||||||||| |||||| |||||||||||||||||||||||    
T  31430569 ttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaat 31430616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 38015660 - 38015597
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| | ||||| ||||||||| ||||||| || |||||    
T  38015660 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattgatatactgaacctattc 38015597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 45454015 - 45453952
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| ||||||||||||||||||  || ||||| |||||||||||| ||||| |||||    
T  45454015 agagagatgagatcaggtctttcgaatcatataagtttctctaattggtataatgcacctattc 45453952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 13972656 - 13972717
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt 247  Q
    |||||||||||||||| |||||||| ||||||||| ||  |||||||| |||||||||||||    
T  13972656 aatcgtgtcacgttttccagtaatcatgacacgatccccttttttcagtttcttcagttttt 13972717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 465
Target Start/End: Complemental strand, 20947161 - 20947116
Alignment:
Q  421 tattaaactccctaattctcctca-ccccaaaccaccaacctcctt 465  Q
    |||||||||||||||||||||| | |||||||||||||||||||||    
T  20947161 tattaaactccctaattctccttacccccaaaccaccaacctcctt 20947116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 22630982 - 22630917
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | |||||||||||||||  |||||| || ||||||||||||||||| |||||||    
T  22630982 agagagatgagtttaggtctttcgaatcatttatgttcccttaattggtatactgcacctattctt 22630917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 37937183 - 37937248
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| | ||||| ||||||||||||||| |||| |||||||    
T  37937183 agagagatgagtttaggtctttcgaatcatcgatgttcccctaattggtataccgcacctattctt 37937248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 25820811 - 25820875
Alignment:
Q  87 gagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||| |  ||||||||||||||| | ||||| ||||||||| |||||||||| |||||||    
T  25820811 gagagatgagactaggtctttcgaatcatcgatgttcccctaattgatatactgcacctattctt 25820875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 13972551 - 13972602
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||| |||||| | |||||||||| |||||| ||||||    
T  13972551 cttgtgtaacaaaccacctaaattaggatttccataattgtgtcatgttttt 13972602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 327
Target Start/End: Complemental strand, 25873272 - 25873202
Alignment:
Q  257 ttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||| |||||||||||| |||||| |||||| |||||||||||||||||   ||||||| ||||||||||||    
T  25873272 ttaaacttgcttgtgaactcaaaa-tatcatgaaaaagactctaaaaatagtgaatgactgactgtcatcac 25873202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 373
Target Start/End: Original strand, 26146790 - 26146832
Alignment:
Q  331 cctcctcaccatatttcgcaaccaacaccctataccacaaact 373  Q
    ||||||| |||||| |||| |||||||||||||||||||||||    
T  26146790 cctcctcgccatatctcgccaccaacaccctataccacaaact 26146832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 331 - 373
Target Start/End: Original strand, 43310834 - 43310876
Alignment:
Q  331 cctcctcaccatatttcgcaaccaacaccctataccacaaact 373  Q
    ||||||| |||||| |||| |||||||||||||||||||||||    
T  43310834 cctcctcgccatatctcgccaccaacaccctataccacaaact 43310876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 36808406 - 36808471
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||| ||||   || ||| |||||||||||| ||||||| |||||||    
T  36808406 agagagatgagatcaggtctttcaaatcctttaagttcccctaattggtacactgcacctattctt 36808471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 11059069 - 11059029
Alignment:
Q  287 taaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||||||||||||||||||  ||||| ||||||||||||    
T  11059069 taaaaagactctaaaaatgtgatatgacggactgtcatcac 11059029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 465
Target Start/End: Complemental strand, 12807625 - 12807581
Alignment:
Q  422 attaaactccctaattctcctcacccc-aaaccaccaacctcctt 465  Q
    ||||||||||||||||||| | ||||| |||||||||||||||||    
T  12807625 attaaactccctaattctcataacccctaaaccaccaacctcctt 12807581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 352 - 404
Target Start/End: Original strand, 40430010 - 40430062
Alignment:
Q  352 ccaacaccctataccacaaactctccttttcagtcaacacccgccaacaccac 404  Q
    ||||||||||| |||||||||| ||| | ||  ||||||||||||||||||||    
T  40430010 ccaacaccctaaaccacaaactatccctatccatcaacacccgccaacaccac 40430062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 27346 - 27203
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||| ||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  27346 tttgatttgattgcataaaattaaatagcataaaataaagattcggttagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttt 27247  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| |||||||||||||||||||  |||||||    
T  27246 cgaatcatctatgttcccctaattggtatactgcatctattctt 27203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 326
Target Start/End: Complemental strand, 26336 - 26253
Alignment:
Q  244 tttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactcta-aaaatgtggaatgacagactgtcatca 326  Q
    |||||| |||||||||   ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  26336 tttttcatgctgcttatgtttgcttgtgaactcaaaaatatcataaaaagactctaaaaaatgtggaatgacagactatcatca 26253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 3e-49; HSPs: 108)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 40795239 - 40795096
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  |||||||||| |||||||| ||| |||||||||||||||||||||| | |||||||||||    
T  40795239 tttgatttgattgcataaaattaaataacataaaataaagatttggttaggaaatatagttttggttagaaaatatgaagagagataagatcaggtcttt 40795140  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| |||||||||||||||||||||||| ||| |||||||    
T  40795139 cgaatcatctatgtttccctaattggtatactacacctattctt 40795096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 52006416 - 52006559
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||  ||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  52006416 tttgatttgattgcataaaattaaataacaggaaataaagattcggttagaaaatatagatttggttagaaaatatgaagagagatgagaccaggtcttt 52006515  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||    
T  52006516 cgaatcatctatgttcccctaattggtatactgcacctattctt 52006559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 38283378 - 38283517
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||||| |||||||||||||||||||||||  |||  | |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  38283378 atttgattgcataaaattaaataacataaaataaagattgagctagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaa 38283477  T
Q  112 tcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||| ||||||| |||||||||||||||||||  |||||||    
T  38283478 tcatctatgttcccctaattggtatactgcatctattctt 38283517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 19827648 - 19827509
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||    ||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  19827648 tttgatttgattgcataaaa----ataacataaaataaagattcggttagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttt 19827553  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||    
T  19827552 cgaatcatctatgttcccctaattggtataatgcacatattctt 19827509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 327 - 506
Target Start/End: Complemental strand, 40434288 - 40434108
Alignment:
Q  327 cctccctcctcaccatatttcgcaaccaacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaa 426  Q
    |||||||||||||| ||  |||| ||||||||||||||||||||||||||||| |||   |||||||  ||| ||||| ||| || ||| ||||||||||    
T  40434288 cctccctcctcaccgtacctcgccaccaacaccctataccacaaactctccttctcaactaacaccctacaataccactttcctagtaaagcactattaa 40434189  T
Q  427 actccctaattctcctcaccc-caaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaagttatttttt 506  Q
    |||||||||||||||| |||| |||||||||||||||||| |||||||| |||  |||||| |||||||||||||||||||    
T  40434188 actccctaattctccttaccctcaaaccaccaacctccttactcaaacacacataattccaatcaacccaagttatttttt 40434108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 24044026 - 24044169
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||  ||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  24044026 tttgatttgattgtataaaattaaataacataaaataaatattcagttagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttt 24044125  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
      ||| | ||||||| |||||||||||||||| ||| |||||||    
T  24044126 gaaattatctatgttcccctaattggtatactacacctattctt 24044169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 40902972 - 40903111
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||||| ||||||||||||| |||||||||  |||   ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||    
T  40902972 atttgattgcataaaattaaataatataaaataaagattgaattagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttagaa 40903071  T
Q  112 tcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||| ||||||| |||||||||||||||||||| |||||||    
T  40903072 tcatctatgttcccctaattggtatactgcacctattctt 40903111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 44165019 - 44164876
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||  ||||||  ||| |||| |||||||||||||| ||||||||||||||||||| |||| |||| ||||||    
T  44165019 tttgatttgattgcataaaattaaataacaggaaataaagattcggtttgaaaatatagatttggttagaaaatatgaagagacatgagatcaagtcttt 44164920  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| |||||||||||||||| |||||||||||    
T  44164919 cgaatcatctatgttcccctaattggtatactacacatattctt 44164876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 15445256 - 15445393
Alignment:
Q  13 tttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaat 112  Q
    ||||||||| |||||||||||||||  ||||||  ||| |||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  15445256 tttgattgcataaaattaaataacaggaaataaagattcggtt-gaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaat 15445354  T
Q  113 cacctatgtttccctaattggtatactgcacatattctt 151  Q
    || ||||||| |||||||||||||||||||| |||||||    
T  15445355 catctatgttcccctaattggtatactgcacctattctt 15445393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 15429741 - 15429884
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||  ||||||  ||| | || |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  15429741 tttgatttgattgcataaaattaaataacaggaaataaagattcgttttgaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttt 15429840  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
     |||||| ||||||| |||||||||||||||| ||| |||||||    
T  15429841 tgaatcatctatgttcccctaattggtatactacacctattctt 15429884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 15436355 - 15436498
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||  ||||||  ||| | || |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  15436355 tttgatttgattgcataaaattaaataacaggaaataaagattcgttttgaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttt 15436454  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
     |||||| ||||||| |||||||||||||||| ||| |||||||    
T  15436455 tgaatcatctatgttcccctaattggtatactacacctattctt 15436498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 27676944 - 27677083
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||||| |||||||||||||||||||||||  |||   ||||||||||||||||| |||||||||||||||||||||||| || |||||| |||||    
T  27676944 atttgattgcataaaattaaataacataaaataaagattgaattagaaaatatagatttggttagaaaatatgaagagagatgagataaggtctatcgaa 27677043  T
Q  112 tcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||  |||||| | |||||||||||||||||| |||||||    
T  27677044 tcatttatgttcctctaattggtatactgcacctattctt 27677083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 49270915 - 49270773
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| || |||||||| |||||||||||  |||  | ||||||||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  49270915 tttgatttgattgcatacaattaaatgacataaaataaagattcagatagaaaatatagatttagttagaaattatgaagagagatgagatca-gtcttt 49270817  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| |||| ||  |||||||||||||||||||||||||||    
T  49270816 cgaatcatctatattctcctaattggtatactgcacatattctt 49270773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 48415414 - 48415557
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||||| |||||||||||||||||||||||  |||  || ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  48415414 atttgattgcataaaattaaataacataaaataaagattgagtaagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaa 48415513  T
Q  112 tcacc----tatgtttccctaattggtatactgcacatattctt 151  Q
    | | |    |||||| |||||||||||||||||||| |||||||    
T  48415514 ttatctatatatgttcccctaattggtatactgcacctattctt 48415557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 188 - 326
Target Start/End: Complemental strand, 19820089 - 19819950
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgat-gcctttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattc-aaaaatatc 285  Q
    ||||||| |||||||||||||||||||||||||||  ||||||| || |||||||| ||||||||||| |||||||||||||||||| || |||||||||    
T  19820089 aatcgtgacacgtttttcagtaatcgtgacacgatccccttttttagtttcttcag-tttttcttgctacttaatcttgcttgtgaactcaaaaaatatc 19819991  T
Q  286 ataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||||||||||| |||||||   ||||||| |||||||||||    
T  19819990 ataaaaagactttaaaaatagcgaatgactgactgtcatca 19819950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 330 - 479
Target Start/End: Complemental strand, 5634001 - 5633851
Alignment:
Q  330 ccctcctcaccatatttcgcaaccaacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaact 429  Q
    |||||||| |||||| ||| |  ||||||||||||||||||||||||||| |||   ||||  | |||||||||| | | ||||||||||||||||||||    
T  5634001 ccctcctctccatatctcgaagacaacaccctataccacaaactctccttctcaactaacaatctccaacaccacttacctaataatgcactattaaact 5633902  T
Q  430 ccctaattctcctcacc-ccaaaccaccaacctcctttctcaaacaaacag 479  Q
    | ||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  5633901 cactaattctccttacctccaaacctccaacctcctttctcaaacaaacag 5633851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 245 - 327
Target Start/End: Complemental strand, 14571107 - 14571025
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14571107 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagaccgtcatcac 14571025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 58 - 151
Target Start/End: Complemental strand, 19820914 - 19820821
Alignment:
Q  58 aaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||| |||||  |||||||||||||||||||||||| |||||||||||||||||| || |||| |||||||||||||||||||| |||||||    
T  19820914 aaaataaagattcggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctttgttcccctaattggtatactgcacctattctt 19820821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 188 - 326
Target Start/End: Original strand, 27677817 - 27677966
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagtttttt--------cttgctgcttaatcttgcttgtgaattca 277  Q
    ||||||||||||||||||||||||||||||||| | ||  |||||||| ||||||||||||||        ||||||||||||||||| ||||||| |||    
T  27677817 aatcgtgtcacgtttttcagtaatcgtgacacggtccccttttttcagtttcttcagttttttttgcttttcttgctgcttaatcttgattgtgaactca 27677916  T
Q  278 aaaatatcat-aaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||| |||||||||||||||||   |||| || |||||||||||    
T  27677917 aaaatatcataaaaaagactctaaaaatagtgaataactgactgtcatca 27677966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 188 - 304
Target Start/End: Original strand, 27691885 - 27692003
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatc 285  Q
    |||||||||||||||||||||||||||||||| || ||  |||||||| || |||    |||||||||||||||||||||||||||||||||||||||||    
T  27691885 aatcgtgtcacgtttttcagtaatcgtgacacaatccccttttttcagttt-ttcttgcttttcttgctgcttaatcttgcttgtgaattcaaaaatatc 27691983  T
Q  286 at-aaaaagactctaaaaat 304  Q
     | |||||||||||||||||    
T  27691984 gtaaaaaagactctaaaaat 27692003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 419 - 502
Target Start/End: Original strand, 41458113 - 41458196
Alignment:
Q  419 actattaaactccctaattctcctcaccccaaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaagttatt 502  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||  |||| | |||||||||||||||    
T  41458113 actattaaactccctaaatctcctcaccccaaaccatcaacctcctttctcaaacaaacaaaattcaaatcaacccaagttatt 41458196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 188 - 327
Target Start/End: Complemental strand, 19826850 - 19826700
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattca 277  Q
    ||||||| ||||||||||||||||||||||||||| ||  |||||||| |||||||||||||        ||||| ||||||||||| |||||||| |||    
T  19826850 aatcgtgacacgtttttcagtaatcgtgacacgatccccttttttcagtttcttcagtttttcttgcttttcttgttgcttaatcttacttgtgaactca 19826751  T
Q  278 aaaa-tatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||| | |||||||||||||||||||||   ||||||| ||||||||||||    
T  19826750 aaaaatttcataaaaagactctaaaaatagcgaatgactgactgtcatcac 19826700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 188 - 327
Target Start/End: Original strand, 52007292 - 52007432
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcctttt--tcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatc 285  Q
    ||||||| ||||||||| ||| ||||||||| ||| || |||  |||| |||||| | ||||||||||||||||| ||||||| |||| |||| ||||||    
T  52007292 aatcgtgacacgttttttagttatcgtgacatgattccctttcttcagtttcttc-gatttttcttgctgcttaagcttgcttttgaactcaacaatatc 52007390  T
Q  286 ataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||||||||||||||||   ||||||| ||||||||||||    
T  52007391 ataaaaagactctaaaaatagcgaatgactgactgtcatcac 52007432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 5680550 - 5680469
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||| || |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5680550 ttttcttgttgtttaagcttgcttatgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagtctgtcatca 5680469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 12783082 - 12782998
Alignment:
Q  67 atttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||| ||||| |||||||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||||||| |||||||    
T  12783082 atttggttaggaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcctctaattggtatactgcacctattctt 12782998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 188 - 327
Target Start/End: Original strand, 15430616 - 15430767
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc---tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattc 276  Q
    |||||||||||||||||||||||| |||||||||| ||   |||||||| |||| ||||||||        ||||||||||||| |||||||||||| ||    
T  15430616 aatcgtgtcacgtttttcagtaattgtgacacgatccccgttttttcagtttctccagtttttcttgcttttcttgctgcttaagcttgcttgtgaactc 15430715  T
Q  277 aaaaatatcat-aaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    ||||||||||| ||||||||||| |||||   ||||||| ||||||||||||    
T  15430716 aaaaatatcataaaaaagactctgaaaataacgaatgactgactgtcatcac 15430767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 188 - 327
Target Start/End: Original strand, 15437230 - 15437381
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc---tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattc 276  Q
    |||||||||||||||||||||||| |||||||||| ||   |||||||| |||| ||||||||        ||||||||||||| |||||||||||| ||    
T  15437230 aatcgtgtcacgtttttcagtaattgtgacacgatccccgttttttcagtttctccagtttttcttgcttttcttgctgcttaagcttgcttgtgaactc 15437329  T
Q  277 aaaaatatcat-aaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    ||||||||||| ||||||||||| |||||   ||||||| ||||||||||||    
T  15437330 aaaaatatcataaaaaagactctgaaaataacgaatgactgactgtcatcac 15437381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 24044976 - 24045058
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    ||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||   ||||||| ||||||||||||    
T  24044976 ttttcttgctgcttaatcttgtttgtgaactcaaaaatatcaaaaaaagactctaaaaataacgaatgactgactgtcatcac 24045058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 326
Target Start/End: Complemental strand, 44164142 - 44164001
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc-----tttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaat 282  Q
    ||||||||||||||||||||||||||||||||||| ||     |||||   ||||||     ||||||||||||||||||||||||||||| ||||||||    
T  44164142 aatcgtgtcacgtttttcagtaatcgtgacacgatccccccttttttttcccttcttgc---ttttcttgctgcttaatcttgcttgtgaactcaaaaat 44164046  T
Q  283 atcata-aaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||| |||||||| |||||||   ||||||| |||||||||||    
T  44164045 atcataaaaaagactttaaaaatagtgaatgactgactgtcatca 44164001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 326
Target Start/End: Original strand, 53010376 - 53010458
Alignment:
Q  244 tttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||   ||||||| |||| ||||||    
T  53010376 tttttcttgctgcttaatcttacttgtgaactcaaaaatatcataaaaagactctaaaaataatgaatgactgactatcatca 53010458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 353 - 504
Target Start/End: Complemental strand, 296418 - 296266
Alignment:
Q  353 caacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctcacccc-aaa 451  Q
    |||||||||| || ||||||||||| | || |||||||  | |||||||||| | | ||| || ||| |||||| ||||||| ||||||| ||||| |||    
T  296418 caacaccctacacgacaaactctccctatctgtcaacaatctccaacaccacttacctaacaacgcattattaatctccctacttctccttacccccaaa 296319  T
Q  452 ccaccaacctcctttctcaaacaaacaggattccagtcaacccaagttatttt 504  Q
    | |||||||||||| ||||||||||| | ||||||||||| ||||| ||||||    
T  296318 ctaccaacctccttactcaaacaaactgaattccagtcaatccaagatatttt 296266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 3720587 - 3720483
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  |||| ||| |||||||||||||| |||| |||||||  | | |||||| || ||||||||    
T  3720587 tttgatttgattgcataaaattaaataacataaaataaagattttgtttgaaaatatagatttggttataaaatatatacatagatgagattaggtcttt 3720488  T
Q  108 cgaat 112  Q
    |||||    
T  3720487 cgaat 3720483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 40794273 - 40794214
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 304  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  40794273 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 40794214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 27014423 - 27014357
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  27014423 aagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 27014357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 3797771 - 3797836
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  3797771 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 3797836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 5670736 - 5670671
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  5670736 agagagatgcgatcaggtctttcgaatcatctatgttcccctaattggtatactgcacatattctt 5670671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 5673054 - 5672989
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||  |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  5673054 agagagatgcgatcaggtctttcgaatcatctatgttcccctaattggtatactgcacatattctt 5672989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 12782187 - 12782106
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||||| ||||||||| || ||||||||||||||||| ||||||||||||   ||||||| |||||||||||    
T  12782187 ttttcttgctgcttaagcttgcttgtaaactcaaaaatatcataaaatgactctaaaaatagcgaatgactgactgtcatca 12782106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 19859485 - 19859550
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  19859485 agagagatgagatcaggtctttcgaatcatctatgatcccctaattggtatactgcacatattctt 19859550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 27677706 - 27677763
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  27677706 ttcttccttgtgtaacaaaccaccaaaattagggtttccataatcgtgtcacgttttt 27677763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 34017744 - 34017809
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  34017744 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 34017809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 39501807 - 39501742
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  39501807 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 39501742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 40616771 - 40616836
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  40616771 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 40616836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 48637664 - 48637607
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcac 143  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  48637664 agagagatgagatcaggtctttcgaatcatctatgtttccctaattggtatactgcac 48637607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 52530898 - 52530963
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  52530898 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 52530963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 21419060 - 21419001
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 304  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||    
T  21419060 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaat 21419001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 196 - 296
Target Start/End: Complemental strand, 35509320 - 35509229
Alignment:
Q  196 cacgtttttcagtaatcgtgacacgatgcctttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagac 295  Q
    ||||||||||||||||||||||||||| ||        |||||||||||||| |||| |||||||||||||||||||| |||||||||||||| ||||||    
T  35509320 cacgtttttcagtaatcgtgacacgatccc--------cttcttcagttttt-cttgttgcttaatcttgcttgtgaactcaaaaatatcatataaagac 35509230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 327
Target Start/End: Complemental strand, 3718417 - 3718335
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||||| ||||||| |||||||||||| |||||||||||||||||| |||||||||||   ||||||  ||||||||||||    
T  3718417 ttttcttgttgcttaagcttgcttgtgaactcaaaaatatcataaaaatactctaaaaatagtgaatgagtgactgtcatcac 3718335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 56199012 - 56198950
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    ||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||| ||||    
T  56199012 agagagatgaaatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctatt 56198950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 11195834 - 11195769
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  11195834 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacatattctt 11195769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 19864480 - 19864545
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||| | |||||||||||||||||||| |||||||    
T  19864480 agagagatgagatcaggtctttcgaatcatctatgatcccctaattggtatactgcacctattctt 19864545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 24044792 - 24044849
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||    
T  24044792 ttcttccttgtgtaacaaactaccaaaattagggtttccataatcgtgtcacgttttt 24044849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 24150831 - 24150766
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| || |||| |||||||||||||||||||| |||||||    
T  24150831 agagagatgagatcaggtctttcgaatcatctgtgttcccctaattggtatactgcacctattctt 24150766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 27691774 - 27691831
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  27691774 ttcttccttgtgtaacaaaccaccaaaattagggttttcataatcgtgtcacgttttt 27691831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 39498468 - 39498403
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||| ||| |||||||||||||||||||| |||||||    
T  39498468 agagagatgagatcaggtctttcgaatcatctaagttcccctaattggtatactgcacctattctt 39498403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 19820194 - 19820143
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  19820194 cttgtgtaacaaaccaccaaaattagggtttccataatcgtgtcacgttttt 19820143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 21419253 - 21419202
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  21419253 cttgtgtaacaaaccacctaaattagggtttccataatcgtgtcacgttttt 21419202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 245 - 327
Target Start/End: Complemental strand, 27013311 - 27013228
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcata-aaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||||| ||||||| ||||| |||||| |||||||||||||| ||||||||||||||||   ||||||| ||||||||||||    
T  27013311 ttttcttgttgcttaagcttgcctgtgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatcac 27013228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 33927131 - 33927068
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  33927131 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 33927068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 35509430 - 35509379
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  35509430 cttgtgtaacaaaccacccaaattagggtttccttaatcgtgtcacgttttt 35509379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 52007187 - 52007238
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  52007187 cttgtgtaacaaaccaccaaaattagggtttccataatcgtgtcacgttttt 52007238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 56195686 - 56195623
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  56195686 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 56195623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 12786349 - 12786287
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagattt 70  Q
    |||||||||||||| |||||||||||||||||||||||  |||  ||||||||||||||||||    
T  12786349 tttgatttgattgcataaaattaaataacataaaataaagattcagttagaaaatatagattt 12786287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 15430505 - 15430562
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    ||||||||||||||| |||||||| |||||| |||||||||||| |||||||||||||    
T  15430505 ttcttccttgtgtaaaaaaccaccaaaattatggtttccataattgtgtcacgttttt 15430562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 15437119 - 15437176
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    ||||||||||||||| |||||||| |||||| |||||||||||| |||||||||||||    
T  15437119 ttcttccttgtgtaaaaaaccaccaaaattatggtttccataattgtgtcacgttttt 15437176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 18673045 - 18673110
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  18673045 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 18673110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 496
Target Start/End: Complemental strand, 33101022 - 33100877
Alignment:
Q  352 ccaacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctcaccc-caa 450  Q
    ||||||||||| |||||||||||||||| ||   ||||||||||||||||||| | | ||| ||| |   |||||| ||  | |||||||| |||| |||    
T  33101022 ccaacaccctaaaccacaaactctccttctccaccaacacccgccaacaccacttccctaacaattctaaattaaattcttttattctccttaccctcaa 33100923  T
Q  451 accaccaacctcctttctcaaacaaacaggattccagtcaacccaa 496  Q
    ||| ||||||||||  ||| |||||| || ||||||||||||||||    
T  33100922 acctccaacctcctgactctaacaaatagaattccagtcaacccaa 33100877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 37103195 - 37103244
Alignment:
Q  102 gtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  37103195 gtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 37103244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 44164253 - 44164196
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||||||||  |||||| |||||||||||||||||||| |||||    
T  44164253 ttcttccttgtgtaacaaaccactaaaattagggtttccataatcgtgtcacattttt 44164196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 3718589 - 3718538
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||| |||||| |||||||||||||||||||| |||||    
T  3718589 cttgtgtaacaaaccacctaaattagggtttccataatcgtgtcacattttt 3718538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 151
Target Start/End: Complemental strand, 15432267 - 15432172
Alignment:
Q  56 agaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||| ||||||  || |||||||  ||||||||||| |  ||||||||||| ||| | ||||| |||||||||||||||||||| |||||||    
T  15432267 agaaaataaagatttgtttggaaaataataagagagatgagactaggtctttcgagtcatcgatgttcccctaattggtatactgcacctattctt 15432172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 19826955 - 19826904
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||  |||||| ||||||||||||||||||||||||||    
T  19826955 cttgtgtaacaaaccacaaaaattagggtttccataatcgtgtcacgttttt 19826904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 34319880 - 34319943
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| | ||||| || ||||||||||||||||| |||||    
T  34319880 agagagatgagatcaggtctttcgaatcatcgatgttcccttaattggtatactgcacctattc 34319943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 15405044 - 15405106
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    |||||||||| |||||||||||||||||| ||| ||| ||||||||| |||||||||| ||||    
T  15405044 agagagatgagatcaggtctttcgaatcatctaagttcccctaattgatatactgcacctatt 15405106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 29324048 - 29323979
Alignment:
Q  257 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||| |||||||||||| |||||| |||||||||||||||||||||||    |||||| |||||||||||    
T  29324048 ttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactgactgtcatca 29323979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 326
Target Start/End: Original strand, 44809835 - 44809904
Alignment:
Q  257 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||| |||||||||||| |||||| |||||||||||||||||||||||    |||||| |||||||||||    
T  44809835 ttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactgactgtcatca 44809904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 18911656 - 18911592
Alignment:
Q  87 gagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||| |  |||||||| |||||| ||||||| |||||||||||||||||||| |||||||    
T  18911656 gagagatgagactaggtcttttgaatcatctatgttcccctaattggtatactgcacctattctt 18911592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 275 - 327
Target Start/End: Complemental strand, 49269786 - 49269734
Alignment:
Q  275 tcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||||||||||||||| |||||||||||||  |||||| ||||||||||||    
T  49269786 tcaaaaatatcataaaaaaactctaaaaatgtaaaatgactgactgtcatcac 49269734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 73 - 140
Target Start/End: Original strand, 8871716 - 8871782
Alignment:
Q  73 ttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactg 140  Q
    ||||||||||||| ||||||||| |||||||||||| ||||| ||| ||| || ||||||||||||||    
T  8871716 ttagaaaatatga-gagagatgagatcaggtctttcaaatcatctaagttcccttaattggtatactg 8871782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 8877451 - 8877525
Alignment:
Q  73 ttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    ||||||||||||| ||||||||| |||||||||||| ||||| ||| ||| ||||| || ||||||||||| ||||    
T  8877451 ttagaaaatatga-gagagatgagatcaggtctttcaaatcatctaagttcccctatttagtatactgcacctatt 8877525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 12782365 - 12782318
Alignment:
Q  157 tgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||||||    
T  12782365 tgtaacaaacaacctaaattagggtttccataatcgtgtcacgttttt 12782318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 15812099 - 15812162
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| ||||||||||||||  || | ||||| |||||||||||||||||||| |||||    
T  15812099 agagagatgagatcaggtctttcgatacatcgatgttcccctaattggtatactgcacctattc 15812162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 304
Target Start/End: Original strand, 34320775 - 34320822
Alignment:
Q  257 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 304  Q
    |||| |||||||||||| |||||| |||||||||||||||||||||||    
T  34320775 ttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaat 34320822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 40794467 - 40794416
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||| ||||||||||| |||||| ||||||||||||| ||||||||||||    
T  40794467 cttgtgcaacaaaccacctaaattagggtttccataatcttgtcacgttttt 40794416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 46955440 - 46955503
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    ||||||||||| || |||||||| |||||| | ||||| |||||||||||||||||||| ||||    
T  46955440 aagagagatgagattaggtcttttgaatcatcgatgttcccctaattggtatactgcacctatt 46955503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 445 - 495
Target Start/End: Original strand, 38655797 - 38655847
Alignment:
Q  445 ccccaaaccaccaacctcctttctcaaacaaacaggattccagtcaaccca 495  Q
    |||||||| |||||||||||| |||| |||||||| |||||||||||||||    
T  38655797 ccccaaacaaccaacctccttactcatacaaacagaattccagtcaaccca 38655847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 12238484 - 12238447
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataa 45  Q
    |||||||||||||| |||||||||||||||||||||||    
T  12238484 tttgatttgattgcataaaattaaataacataaaataa 12238447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 250 - 326
Target Start/End: Complemental strand, 15431240 - 15431164
Alignment:
Q  250 ttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||| |||| |||||||||||| |||||| |||||| |||||||||||||||||   ||||||| |||||||||||    
T  15431240 ttgctgtttaaacttgcttgtgaactcaaaa-tatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 15431164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 250 - 326
Target Start/End: Complemental strand, 15437854 - 15437778
Alignment:
Q  250 ttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||| |||| |||||||||||| |||||| |||||| |||||||||||||||||   ||||||| |||||||||||    
T  15437854 ttgctgtttaaacttgcttgtgaactcaaaa-tatcatgaaaaagactctaaaaatagtgaatgactgactgtcatca 15437778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 35510150 - 35510085
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| |||| || |||||||||||||||| ||| |||||||    
T  35510150 agagagatgagtttaggtctttcgaatcatctatattcccctaattggtatactacacctattctt 35510085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 3797710 - 3797750
Alignment:
Q  5 tattttgatttgattgcgtaaaattaaataacataaaataa 45  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  3797710 tattttgatttgattgcataaaattaaataacagaaaataa 3797750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 5706550 - 5706486
Alignment:
Q  87 gagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||| |  ||||||||||| ||| | ||||| |||||||||||||||||||| |||||||    
T  5706550 gagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctattctt 5706486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 465
Target Start/End: Complemental strand, 5760122 - 5760010
Alignment:
Q  353 caacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctcaccccaaac 452  Q
    |||||||||| |||| ||||||||||| ||   ||||| ||||||||||||  | ||||  |   || ||||||||||| |||||||||  ||| |||||    
T  5760122 caacaccctaaaccataaactctccttctccaccaacaaccgccaacaccatttccttagaagaacaatattaaactccttaattctccgtaccgcaaac 5760023  T
Q  453 caccaacctcctt 465  Q
    |||||||||||||    
T  5760022 caccaacctcctt 5760010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 12238423 - 12238359
Alignment:
Q  87 gagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||| |  ||||||||||| ||| | ||||| |||||||||||||||||||| |||||||    
T  12238423 gagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctattctt 12238359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 15164363 - 15164287
Alignment:
Q  75 agaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||| ||| |||||||||||||| | || || | |||||||||||| ||| | |||||||    
T  15164363 agaaaatatggagagagatgagatcgggtctttcgaatcatcgatattcctctaattggtatattgcccctattctt 15164287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 3719260 - 3719217
Alignment:
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| | |||||||||||||||||||||||||| |||||||    
T  3719260 cgaatcatccatgtttccctaattggtatactgcacctattctt 3719217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 29324983 - 29324921
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||| | |||||||||||||||||| | ||| |||||||||||||||| ||||| |||||    
T  29324983 agagagatcagatcaggtctttcgaatcatcgatg-ttccctaattggtatattgcacctattc 29324921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 24044903 - 24044937
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgat 222  Q
    ||||||||||| |||||||||||||||||||||||    
T  24044903 aatcgtgtcacatttttcagtaatcgtgacacgat 24044937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 5681645 - 5681608
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataa 45  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  5681645 tttgattggattgcataaaattaaataacataaaataa 5681608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 21419947 - 21419882
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| | ||||| |||||||||||||||  ||| |||||||    
T  21419947 agagagatgagtttaggtctttcgaatcatcgatgttcccctaattggtataccacacctattctt 21419882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 25962217 - 25962152
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| | |||||  |||||||||||||| |||| |||||||    
T  25962217 agagagatgagtttaggtctttcgaatcatcgatgttctcctaattggtataccgcacctattctt 25962152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 53009521 - 53009586
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | |||||||| |||||  ||||||| |||||||| ||||||||||| |||||||    
T  53009521 agagagatgagtttaggtcttttgaatcgtctatgttcccctaattagtatactgcacctattctt 53009586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 8875418 - 8875470
Alignment:
Q  152 ccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    ||||||||||||||| |||  ||||| | |||||| |||||||||||||||||    
T  8875418 ccttgtgtaacaaacaacctgaattaggatttccaaaatcgtgtcacgttttt 8875470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 493
Target Start/End: Complemental strand, 10008640 - 10008592
Alignment:
Q  445 ccccaaaccaccaacctcctttctcaaacaaacaggattccagtcaacc 493  Q
    ||||||||||||||||||||| |||| ||||||||  ||||| ||||||    
T  10008640 ccccaaaccaccaacctccttactcatacaaacagagttccaatcaacc 10008592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 497
Target Start/End: Original strand, 19837825 - 19837877
Alignment:
Q  445 ccccaaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaag 497  Q
    |||||||||||||||| |||| |||| ||||| || ||||||||| |||||||    
T  19837825 ccccaaaccaccaacccccttactcatacaaatagaattccagtctacccaag 19837877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 504
Target Start/End: Complemental strand, 20509447 - 20509363
Alignment:
Q  421 tattaaactccctaattctcctcaccccaaacc-accaacctcctttctcaaacaaacaggattccagtcaacccaagttatttt 504  Q
    |||||||||| ||||| ||||| ||||| |||| |||||||||||| |||  ||||||||  |||||||| || |||| ||||||    
T  20509447 tattaaactctctaatactccttacccccaacccaccaacctccttactcctacaaacagtgttccagtccactcaagatatttt 20509363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 38296284 - 38296324
Alignment:
Q  334 cctcaccatatttcgcaaccaacaccctataccacaaactc 374  Q
    ||||||||||| |||| ||||||||||||||||| ||||||    
T  38296284 cctcaccatatctcgccaccaacaccctataccaaaaactc 38296324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 48636749 - 48636709
Alignment:
Q  286 ataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||||||||   |||||||||||||||||||    
T  48636749 ataaaaagactctaaaaataacgaatgacagactgtcatca 48636709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1755 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold1755
Description:

Target: scaffold1755; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 353 - 215
Alignment:
Q  13 tttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaat 112  Q
    ||||||||| |||||||||||||||||||||||| ||| ||||||||  ||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  353 tttgattgcataaaattaaataacataaaataatgattcggttagaatttatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaat 254  T
Q  113 cacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||  |||||| ||||||||||||||||||||||||||||    
T  253 catatatgttcccctaattggtatactgcacatattctt 215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 96; Significance: 8e-47; HSPs: 4)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 8104 - 8247
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  ||| |||||| |||||||||||| |||||||||||||||||||||| | |||||||||||    
T  8104 tttgatttgattgcataaaattaaataacataaaataaagattcggttaggaaatatagatttggttagaaaatatgaagagagataagatcaggtcttt 8203  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||  ||||||||||||||||||||||| ||| |||||||    
T  8204 cgaatcatttatgtttccctaattggtatactacacctattctt 8247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 1434 - 1576
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| ||||||||||||||||||||| |  ||| |||||| ||||| |||||| |||||||||||||||||||||| | ||||| |||||    
T  1434 tttgatttgattgcataaaattaaataacataaaatcaagattcggttaggaaataaagatttggttagaaaatatgaagagagattagatcagatcttt 1533  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||  ||| ||||||||||||||| ||||||| |||||||    
T  1534 cgaatcatatat-tttccctaattggtaaactgcacctattctt 1576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 188 - 327
Target Start/End: Original strand, 4723 - 4881
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc-tttttcagcttcttcagttttttc------------------ttgctgcttaatcttgctt 268  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||                  |||||||||||||||| ||    
T  4723 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttttcagcttcttcagttttttcttgcttttctttctttttttgctgcttaatcttgttt 4822  T
Q  269 gtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    ||||| ||||||||||||||||||||||||||||||   ||||||| ||||||||||||    
T  4823 gtgaactcaaaaatatcataaaaagactctaaaaataacgaatgactgactgtcatcac 4881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 4631 - 4687
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgtttt 203  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||    
T  4631 ttcttccttgtgtaacaaaccacccaaattagggtttctataatcgtgtcacatttt 4687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 8e-47; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 7271249 - 7271110
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||||| |||||||||||||||||||||||  |||| ||| |||||||||||||| ||||||||||||||||||| |||| |||||||||||||||    
T  7271249 atttgattgcataaaattaaataacataaaataaagatttagtttgaaaatatagatttggttagaaaatatgaagagaaatgagatcaggtctttcgaa 7271150  T
Q  112 tcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||| ||||||| |||||||||||||||||||| |||||||    
T  7271149 tcatctatgttcccctaattggtatactgcacctattctt 7271110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 30066546 - 30066403
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  ||| || | |||||||||||||| ||||||||||||||| |||||||| |||||||||||    
T  30066546 tttgatttgattgcataaaattaaataacataaaataaagattcggcttgaaaatatagatttggttagaaaatatgaaaagagatgagatcaggtcttt 30066447  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||    
T  30066446 cgaatcatctatgttcccctaattggtatactgcacctattctt 30066403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 33552358 - 33552215
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  ||| |||| |||||||||||||| ||||||| |||||||||| ||||| |||||||||||    
T  33552358 tttgatttgattgcataaaattaaataacataaaataaagattcggtttgaaaatatagatttggttagaatatatgaagagtgatgagatcaggtcttt 33552259  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||    
T  33552258 cgaatcatctatgttcccctaattggtatactgcacctattctt 33552215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 188 - 304
Target Start/End: Complemental strand, 30065702 - 30065584
Alignment:
Q  188 aatcgtgtcacgtttttc-agtaatcgtgacacgatgcctttttca-gcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatc 285  Q
    |||||||||||||||||  ||||||||||||||||||||||||| | |||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  30065702 aatcgtgtcacgtttttttagtaatcgtgacacgatgccttttttaagctttttcagttttttcttgttgcttaatcttgcttgtgaattcaaaaatatc 30065603  T
Q  286 ataaaaagactctaaaaat 304  Q
    |||||||||||||||||||    
T  30065602 ataaaaagactctaaaaat 30065584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 41876654 - 41876792
Alignment:
Q  13 tttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaat 112  Q
    ||||||||| |||||||||||||||||||||||  |||   ||  ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  41876654 tttgattgcataaaattaaataacataaaataaagattgattttaaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaat 41876753  T
Q  113 cacctatgtttccctaattggtatactgcacatattctt 151  Q
    || ||||||| |||||||||||||||||||| |||||||    
T  41876754 catctatgttcccctaattggtatactgcacctattctt 41876792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 327 - 506
Target Start/End: Original strand, 8249421 - 8249601
Alignment:
Q  327 cctccctcctcaccatatttcgcaaccaacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaa 426  Q
    |||||||||||||| ||  |||| |||||||| |||||||||||||||||||| |||   ||||||  |||| ||||| ||| || ||| ||||||||||    
T  8249421 cctccctcctcaccgtacctcgccaccaacactctataccacaaactctccttctcaactaacaccatccaagaccactttcctagtaaagcactattaa 8249520  T
Q  427 actccctaattctcctca-ccccaaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaagttatttttt 506  Q
    |||||||||||||||| | ||||||||||||||||||||| |||||||| |||  |||||| |||||||||||||||||||    
T  8249521 actccctaattctccttacccccaaaccaccaacctccttactcaaacacacataattccaatcaacccaagttatttttt 8249601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 39192567 - 39192424
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  |||  |||||||||||||||||| |||| ||||||||||||||||||| ||||| |||||    
T  39192567 tttgatttgattgcataaaattaaataacataaaataaagattcagttagaaaatatagatttggttacaaaatatgaagagagatgagatcagatcttt 39192468  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| | ||||| ||||||||| |||| ||||| |||||||    
T  39192467 cgaatcatcaatgttcccctaattgatataatgcacgtattctt 39192424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 188 - 307
Target Start/End: Complemental strand, 2836819 - 2836699
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatc 285  Q
    ||||||| ||||||||||||||||||||||||||| ||  |||||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  2836819 aatcgtgacacgtttttcagtaatcgtgacacgattcccttttttcagtttcttcagttttt-cttgctgcttaagtttgcttgtgaactcaaaaatatc 2836721  T
Q  286 ataaaaagactctaaaaatgtg 307  Q
    ||||||||||||||||||||||    
T  2836720 ataaaaagactctaaaaatgtg 2836699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 34831997 - 34831858
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    ||||||||||  ||||||||||||||||||||||  |||  || ||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  34831997 atttgattgcaaaaaattaaataacataaaataaagattgagtaagaaaatatagatttggttagaaaatatgaagagagatgagattaggtctttcgaa 34831898  T
Q  112 tcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||  ||  ||| |||||||||||||| ||||| |||||||    
T  34831897 tcttctgagttcccctaattggtataatgcacctattctt 34831858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 22937974 - 22938056
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22937974 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaacgtggaatgacagactgtcatcac 22938056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 32837164 - 32837083
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32837164 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacatactgtcatca 32837083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 37214847 - 37214766
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37214847 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgttatca 37214766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 245 - 328
Target Start/End: Complemental strand, 43490874 - 43490791
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcacc 328  Q
    |||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43490874 ttttcttgctgcttaagcttgtttgtgaactcaaaaatatcataaaaagactctaaaaatgtgaaatgacagactgtcatcacc 43490791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 196 - 327
Target Start/End: Complemental strand, 18031850 - 18031709
Alignment:
Q  196 cacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattcaaaaatatc 285  Q
    ||||||||||||||||||||||||||| ||  |||||||| |||||||||||||        ||||||||||||| ||||||| |||| || ||||||||    
T  18031850 cacgtttttcagtaatcgtgacacgattccattttttcagtttcttcagtttttcttgcttttcttgctgcttaaacttgcttttgaactcgaaaatatc 18031751  T
Q  286 ataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    ||||||||||||||||||| ||||||||| |||| |||||||    
T  18031750 ataaaaagactctaaaaatatggaatgacggactatcatcac 18031709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 188 - 326
Target Start/End: Complemental strand, 7270377 - 7270241
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc-tttttcagcttcttcagtttttt-cttgctgcttaatcttgcttgtgaattcaaaaatatc 285  Q
    ||||||| ||| ||||||| |||| ||||||||||||| |||||||| |||||||||||||| ||||    ||  ||||||||||||| |||||||||||    
T  7270377 aatcgtgacacatttttcaataatagtgacacgatgccctttttcagtttcttcagtttttttcttg----tttttcttgcttgtgaactcaaaaatatc 7270282  T
Q  286 ataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||||||||   |||||||||||||||||||    
T  7270281 ataaaaagactctaaaaatagcgaatgacagactgtcatca 7270241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 28787222 - 28787356
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  ||| |||||| |||||||||||| |||| ||||||| ||||||||| | ||| |||||||    
T  28787222 tttgatttgattgcataaaattaaataacataaaataaagattcggttaggaaatatagatttggtta-aaaatataaagagagattagatctggtcttt 28787320  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattct 150  Q
     |||||       ||||||||||||||||||||||| ||||||    
T  28787321 tgaatc-------tttccctaattggtatactgcacctattct 28787356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 302
Target Start/End: Original strand, 4100284 - 4100413
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgccttttt-------cagcttcttcagtttt--------ttcttgctgcttaatcttgcttgtga 272  Q
    ||||||||||||||||| ||||||||||||||||| |||||||       ||| ||||||||||||        |||||||||||||||||||| |||||    
T  4100284 aatcgtgtcacgtttttgagtaatcgtgacacgatccctttttttttcttcagtttcttcagttttccttgcttttcttgctgcttaatcttgcctgtga 4100383  T
Q  273 attcaaaaatatcataaaaagactctaaaa 302  Q
    | ||||||||||||||||||||||||||||    
T  4100384 actcaaaaatatcataaaaagactctaaaa 4100413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 326
Target Start/End: Original strand, 28788252 - 28788401
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcctt--tttcagcttcttcagttttt---------tcttgctgcttaatcttgcttgtgaattc 276  Q
    ||||||| ||||||||||||||||| |||||||||||| |  |||||| |||||||| ||||         ||||||||||||| |||||||||||| |     
T  28788252 aatcgtgacacgtttttcagtaatcatgacacgatgccctcttttcagtttcttcagatttttcttgtttttcttgctgcttaagcttgcttgtgaacta 28788351  T
Q  277 aaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||||||||||||||||||||||||||||    |||||| |||||||||||    
T  28788352 aaaaatatcataaaaagactctaaaaatagcaaatgactgactgtcatca 28788401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 4099452 - 4099545
Alignment:
Q  58 aaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||| |||||  ||||||||||||||||| |||||| |  ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  4099452 aaaataaagattcggttagaaaatatgaagaaagatgagactaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 4099545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 56 - 149
Target Start/End: Complemental strand, 22131419 - 22131326
Alignment:
Q  56 agaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||| ||||| | | |||||||||| |||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  22131419 agaaaataaagattgattaagaaaatatggagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 22131326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 21332643 - 21332708
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  21332643 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 21332708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 30065813 - 30065756
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  30065813 ttcttccttgtgtaacaaaccacccaaattagggtttccataaccgtgtcacgttttt 30065756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 244 - 304
Target Start/End: Complemental strand, 39191413 - 39191353
Alignment:
Q  244 tttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 304  Q
    ||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||||||    
T  39191413 tttttcttgctgcttaagcttgcttgtgaactcaaaagtatcataaaaagactctaaaaat 39191353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 326
Target Start/End: Original strand, 21827959 - 21828041
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||||||||||||||   ||||||| |||||||||||    
T  21827959 ttttcttgctgcttaagcttgcttgcgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 21828041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 329
Target Start/End: Original strand, 40916739 - 40916892
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc-tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattcaa 278  Q
    ||||||| ||| ||||||||||||||||||||||| || |||||||| |||||| ||||||        ||||| ||||||| |||||||||||| ||||    
T  40916739 aatcgtgacacatttttcagtaatcgtgacacgatcccctttttcagtttcttcggtttttcttgcttttcttgttgcttaagcttgcttgtgaactcaa 40916838  T
Q  279 aaatatcat---aaaaagactctaaaaatgtggaatgacagactgtcatcacct 329  Q
    |||||| ||   |||||||||||||||||    |||||| ||||||||||||||    
T  40916839 aaatatgataaaaaaaagactctaaaaatagcaaatgactgactgtcatcacct 40916892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 4100173 - 4100230
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  4100173 ttcttccttgtgtaacaaaccaccaaaattagggtttgcataatcgtgtcacgttttt 4100230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 245 - 326
Target Start/End: Original strand, 21336660 - 21336742
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||| ||||||| |||||||||||| |||||||||| || |||||||||||||||||   ||||||| |||||||||||    
T  21336660 ttttcttgttgcttaagcttgcttgtgaactcaaaaatataataaaaaagactctaaaaatagtgaatgactgactgtcatca 21336742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 12058455 - 12058520
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  12058455 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 12058520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 12088117 - 12088052
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  12088117 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 12088052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 17664711 - 17664646
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattct 150  Q
    ||||||||||| ||||||||||| |||| | ||||||| |||||||||||||||||||| ||||||    
T  17664711 aagagagatgagatcaggtcttttgaattatctatgttcccctaattggtatactgcacctattct 17664646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 18952852 - 18952787
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| ||||  |||||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  18952852 agagagatgagatcaaatctttcaaatcatctatgttcccctaattggtatactgcacatattctt 18952787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 20055933 - 20055868
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||| |||| || ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  20055933 agagatatgagatgaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 20055868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 143
Target Start/End: Original strand, 26752664 - 26752721
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcac 143  Q
    |||||||||| ||||||||||||||||||  |||||| ||||||||||||||||||||    
T  26752664 agagagatgagatcaggtctttcgaatcatttatgttcccctaattggtatactgcac 26752721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 26895567 - 26895632
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||  ||||| |||||||    
T  26895567 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatgttgcacctattctt 26895632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 26907418 - 26907483
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  26907418 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 26907483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 34132946 - 34133011
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  34132946 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 34133011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 34143177 - 34143242
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  34143177 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 34143242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 4099421 - 4099477
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatat 64  Q
    |||||||||||||| |||||||||||||||||||||||  ||| |||||||||||||    
T  4099421 tttgatttgattgcataaaattaaataacataaaataaagattcggttagaaaatat 4099477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 42063080 - 42063016
Alignment:
Q  87 gagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||| |  |||||||| |||||| |||||||||||||||||||||||||||| |||||||    
T  42063080 gagagatgagactaggtcttttgaatcatctatgtttccctaattggtatactgcacctattctt 42063016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 292
Target Start/End: Original strand, 2837526 - 2837641
Alignment:
Q  187 taatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagtt--------ttttcttgctgcttaatcttgcttgtgaattc 276  Q
    |||||||| ||||||||||||||||||||||| ||| ||  || ||||| ||||||||||        |||| ||||||||||| |||||||||||| ||    
T  2837526 taatcgtgacacgtttttcagtaatcgtgacatgattccctttcttcagtttcttcagtttttcttgcttttattgctgcttaagcttgcttgtgaactc 2837625  T
Q  277 aaaaatatcataaaaa 292  Q
     |||||||||||||||    
T  2837626 caaaatatcataaaaa 2837641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 14016101 - 14016164
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| | ||||| |||||||||||||| ||||| |||||    
T  14016101 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatagtgcacctattc 14016164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 33551482 - 33551415
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgat-gcctttttcagcttcttcagttttttcttgct 254  Q
    ||||||| |||||||||||||||||||||||||||  |||||||||  ||||| ||||||||||||||    
T  33551482 aatcgtgacacgtttttcagtaatcgtgacacgatcccctttttcactttctttagttttttcttgct 33551415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 33551587 - 33551536
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||| |||||    
T  33551587 cttgtgtaacaaaccacccaaattagggttttcataatcgtgtcactttttt 33551536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 11959140 - 11959206
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||||  | ||||||||||||||| ||||||| ||||||||||||||| |||| |||||||    
T  11959140 aagagagatgagtttaggtctttcgaatcatctatgttcccctaattggtataccgcacctattctt 11959206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 14016967 - 14017037
Alignment:
Q  257 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||| |||||||||||| |||||| |||||||||||||||||||||||    |||||| ||||||||||||    
T  14016967 ttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactgactgtcatcac 14017037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 41306490 - 41306552
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    |||||||| | ||| |||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  41306490 agagagataagatcgggtctttcgaatcatctatgttcccctaattggtatactgcacctatt 41306552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 23044301 - 23044236
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | |||||||| |||||| ||||||| |||||||||||||||||||| |||||||    
T  23044301 agagagatgagtttaggtcttttgaatcatctatgttcccctaattggtatactgcacctattctt 23044236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 31863874 - 31863809
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |  ||||||||||||||| ||||||| ||||||||| |||||||||| |||||||    
T  31863874 agagagatgagactaggtctttcgaatcatctatgttcccctaattgatatactgcacctattctt 31863809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 37215203 - 37215139
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||||| ||||||||||||||| ||| | |||||||||||||||| ||||| |||||||    
T  37215203 agagagatgaaattaggtctttcgaatcatctaag-ttccctaattggtatattgcacctattctt 37215139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 504
Target Start/End: Original strand, 12832547 - 12832631
Alignment:
Q  421 tattaaactccctaattctcctcacccc-aaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaagttatttt 504  Q
    |||||||||| ||||| ||||| ||||| ||||||||||||||||| |||  ||||||||  |||||||| ||||||| ||||||    
T  12832547 tattaaactctctaatactccttacccccaaaccaccaacctccttactcctacaaacagtgttccagtccacccaagatatttt 12832631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 421 - 504
Target Start/End: Original strand, 12864522 - 12864606
Alignment:
Q  421 tattaaactccctaattctcctcacccc-aaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaagttatttt 504  Q
    |||||||||| ||||| ||||| ||||| ||||||||||||||||| |||  ||||||||  |||||||| ||||||| ||||||    
T  12864522 tattaaactctctaatactccttacccccaaaccaccaacctccttactcctacaaacagtgttccagtccacccaagatatttt 12864606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 21335662 - 21335726
Alignment:
Q  87 gagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||| | || ||||||||||||| ||||||| |||||||| ||||||||||| |||||||    
T  21335662 gagagatgagaccaagtctttcgaatcatctatgttcccctaatttgtatactgcacctattctt 21335726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 43491915 - 43491859
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgca 142  Q
    |||||||||| |||||||||||||||||| ||||||| ||||||| |||||| ||||    
T  43491915 agagagatgagatcaggtctttcgaatcatctatgttcccctaatcggtatattgca 43491859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 7270482 - 7270431
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||| ||||||  ||||| |||||||||||||||||||    
T  7270482 cttgtgtaacaaaccacctaaattagagtttctataatcgtgtcacgttttt 7270431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 18031963 - 18031912
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||  |||||| |||||||| |||||||||||||||||    
T  18031963 cttgtgtaacaaaccactgaaattagggtttccacaatcgtgtcacgttttt 18031912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 7625262 - 7625200
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    |||||||||| |||||||||||| ||||| | ||||| |||||||||||||||| ||| ||||    
T  7625262 agagagatgagatcaggtctttcaaatcatcgatgttcccctaattggtatactacacctatt 7625200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 3581043 - 3580991
Alignment:
Q  445 ccccaaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaag 497  Q
    |||||||| |||||||||||| |||| ||||||||  ||||||||||||||||    
T  3581043 ccccaaactaccaacctccttactcatacaaacagagttccagtcaacccaag 3580991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 496
Target Start/End: Complemental strand, 15772855 - 15772783
Alignment:
Q  425 aaactccctaattctcctcacccc-aaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaa 496  Q
    ||||||||||||||| || ||||| ||||| |||||||| |||||||||||||||   ||||| |||||||||    
T  15772855 aaactccctaattctgctgacccccaaacctccaacctcttttctcaaacaaacatagttccaatcaacccaa 15772783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 22936901 - 22936965
Alignment:
Q  87 gagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||| |  ||||||||||| ||| | ||||| |||||||||||||||||||| |||||||    
T  22936901 gagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctattctt 22936965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 465
Target Start/End: Original strand, 30723557 - 30723601
Alignment:
Q  422 attaaactccctaattctcctca-ccccaaaccaccaacctcctt 465  Q
    ||||||||||||||||||||| | |||||||||||||||||||||    
T  30723557 attaaactccctaattctccttacccccaaaccaccaacctcctt 30723601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 505
Target Start/End: Original strand, 32018962 - 32019114
Alignment:
Q  354 aacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctcaccccaaa-c 452  Q
    ||||||||| |||||||||| ||  | || |||||||||| |||||||||| | | |||||| ||   |||||| ||  | |||||||| ||||| || |    
T  32018962 aacaccctaaaccacaaactatctctctccgtcaacaccctccaacaccacttccctaataaagctaaattaaattcttttattctccttacccccaagc 32019061  T
Q  453 caccaacctcctttctcaaacaaacaggattccagtcaacccaagttattttt 505  Q
    ||||||||||||  |||  |||||||| |||||| ||||||||| | ||||||    
T  32019062 caccaacctcctgactccgacaaacagaattccaatcaacccaaataattttt 32019114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 486
Target Start/End: Original strand, 35637710 - 35637865
Alignment:
Q  331 cctcctcaccatatttcgcaaccaacaccctataccacaaactctccttt-tcagtcaacacccgccaacaccacattcttaataatgcactattaaact 429  Q
    ||||||| |||||  |||||||||||||| | ||||| |||| ||||| | |||  ||||| || |||||||||| ||| ||||||||||  ||| ||||    
T  35637710 cctcctcgccatacctcgcaaccaacaccttgtaccataaac-ctcctctatcaaccaacaacctccaacaccactttcctaataatgcaaaatttaact 35637808  T
Q  430 ccctaattctcctcaccccaaaccaccaacctcctttctcaaacaaacaggattcca 486  Q
    |||| | |  |||||||||||||| |||  ||||||||  ||||||| || ||||||    
T  35637809 ccctcaattgcctcaccccaaacctccatgctcctttcgtaaacaaatagtattcca 35637865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 45
Target Start/End: Complemental strand, 10629431 - 10629397
Alignment:
Q  11 gatttgattgcgtaaaattaaataacataaaataa 45  Q
    ||||||||||| |||||||||||||||||||||||    
T  10629431 gatttgattgcataaaattaaataacataaaataa 10629397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 17664019 - 17663965
Alignment:
Q  150 ttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||||||||||||| |||||    ||| |||||||||||||    
T  17664019 ttccttgtgtaacaaaccacccaaattagggtttatgaaattgtgtcacgttttt 17663965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 40583409 - 40583343
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||||  | ||||||||||||||  | |||||  ||||||||||||||||||| |||||||    
T  40583409 aagagagatgagtttaggtctttcgaatcctcgatgttctcctaattggtatactgcacctattctt 40583343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 14375759 - 14375820
Alignment:
Q  87 gagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    ||||||||| |  ||||||||||| ||| | ||||| |||||||||||||||||||| ||||    
T  14375759 gagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctatt 14375820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 17747686 - 17747617
Alignment:
Q  257 ttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||| ||| ||| |||| |||||| |||||||||||||||||||||||    |||||| |||||||||||    
T  17747686 ttaagctttcttatgaactcaaaattatcataaaaagactctaaaaatagcaaatgactgactgtcatca 17747617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 25329505 - 25329456
Alignment:
Q  277 aaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||||| |||||||||||   ||||||| |||||||||||    
T  25329505 aaaaatatcataaaaaaactctaaaaatagcgaatgactgactgtcatca 25329456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 367
Target Start/End: Complemental strand, 42039267 - 42039234
Alignment:
Q  334 cctcaccatatttcgcaaccaacaccctatacca 367  Q
    |||||||||||||||| |||||||||||||||||    
T  42039267 cctcaccatatttcgccaccaacaccctatacca 42039234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 353 - 453
Target Start/End: Original strand, 14921716 - 14921816
Alignment:
Q  353 caacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctcaccccaaac 452  Q
    ||||||| || ||||||| |||||||| |||  ||||| ||  ||||||||  ||| ||| || ||| |||||||||||||||||||| | ||||| |||    
T  14921716 caacaccttacaccacaagctctccttctcaaccaacaaccttcaacaccattttcctaacaacgcattattaaactccctaattctcatgacccccaac 14921815  T
Q  453 c 453  Q
    |    
T  14921816 c 14921816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 18240150 - 18240202
Alignment:
Q  152 ccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||| ||||||||  ||||||||||| |||||||| ||||||||||| |||||    
T  18240150 ccttatgtaacaagtcacccaaattagggtttccagaatcgtgtcacattttt 18240202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 28563283 - 28563323
Alignment:
Q  287 taaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||||||||||||||||||  ||||| ||||||||||||    
T  28563283 taaaaagactctaaaaatgtgatatgacggactgtcatcac 28563323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 3e-46; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 20887764 - 20887626
Alignment:
Q  13 tttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaat 112  Q
    ||||||||| |||||||||||||||||||||||  |||  || ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  20887764 tttgattgcataaaattaaataacataaaataaagattgagtaagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaat 20887665  T
Q  113 cacctatgtttccctaattggtatactgcacatattctt 151  Q
    || ||||||| |||||||||||||||||||| |||||||    
T  20887664 catctatgttcccctaattggtatactgcacctattctt 20887626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 12 - 151
Target Start/End: Complemental strand, 12583241 - 12583099
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaa 111  Q
    |||||||||| |||||||||||||||||||||||  ||| | ||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||    
T  12583241 atttgattgcataaaattaaataacataaaataaagattcgattagaaaatatagatttggttagaaaatatgaagagagatgagaccaggtctttcgaa 12583142  T
Q  112 tc---acctatgtttccctaattggtatactgcacatattctt 151  Q
    ||   | ||||||| |||||||||||||||||||| |||||||    
T  12583141 tcatgatctatgttcccctaattggtatactgcacctattctt 12583099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 5584330 - 5584422
Alignment:
Q  57 gaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||    
T  5584330 gaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattc 5584422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 5980199 - 5980341
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    ||||||| |||| | |||||||||||||||||||||||  ||| |||||||||||||||| ||  |||||||||||| |||||||||| |||| ||||||    
T  5980199 tttgattagatttcataaaattaaataacataaaataaagattcggttagaaaatatagagttgattagaaaatatg-agagagatgagatcatgtcttt 5980297  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| || ||||||||||||| ||| |||||||    
T  5980298 cgaatcatctatgttcccttaattggtatactacacctattctt 5980341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 5540917 - 5540996
Alignment:
Q  248 tcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5540917 tcttgctgcttatgcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacaaactgtcatcac 5540996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 196 - 327
Target Start/End: Original strand, 5981083 - 5981221
Alignment:
Q  196 cacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt-----tcttgctgcttaatcttgcttgtgaattcaaaaatatcata 288  Q
    |||||||||||||||| |||||||||| ||  ||||| || |||||||||||||     | || || ||||| |||||||||||| ||||||||||||||    
T  5981083 cacgtttttcagtaattgtgacacgattccctttttttagtttcttcagtttttcttgcttttcctacttaaacttgcttgtgaactcaaaaatatcata 5981182  T
Q  289 aaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  5981183 aaaagactctaaaaatgtgaaatgacggactgtcatcac 5981221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 188 - 304
Target Start/End: Complemental strand, 12582366 - 12582240
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattca 277  Q
    ||||||| ||||||||||| ||||||||||||||| ||  |||||||| |||||||||||||        |||| ||||||||||||||||||||| |||    
T  12582366 aatcgtgacacgtttttcaataatcgtgacacgatccccttttttcagtttcttcagtttttcttgcttttctttctgcttaatcttgcttgtgaactca 12582267  T
Q  278 aaaatatcataaaaagactctaaaaat 304  Q
    |||||||||||||||||||||||||||    
T  12582266 aaaatatcataaaaagactctaaaaat 12582240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 14420945 - 14420864
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||| ||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14420945 ttttcttgttgcttaagcttgcttgtgaactaaaaaatatcataaaaagactctaaaaatgtggaatgagagactgtcatca 14420864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 59 - 148
Target Start/End: Original strand, 22173859 - 22173948
Alignment:
Q  59 aaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    ||||| |||||  |||||||||||||||||||||||| |||||||||||||||||| | ||||| |||||||||||||||| ||| ||||    
T  22173859 aaataaagattcggttagaaaatatgaagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactacacctatt 22173948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 245 - 326
Target Start/End: Original strand, 45156837 - 45156918
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||| | |||||| | ||||||||||    
T  45156837 ttttcttgctgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatatagaatgataaactgtcatca 45156918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 410 - 504
Target Start/End: Original strand, 460119 - 460214
Alignment:
Q  410 taataatgcactattaaactccctaattctcctcacccc-aaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaagttatttt 504  Q
    ||||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| ||||  |||||||||||||| | ||||||    
T  460119 taataatgcataattaaactccctaattctccttacccccaaaccaccaacctccttactcaaacatacagatttccagtcaacccatgatatttt 460214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 12516415 - 12516480
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||||||||||||| |||||||    
T  12516415 agagagatgaaatcaggtctttcgaatcatctatattcccctaattggtatactgcacctattctt 12516480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 16953933 - 16953868
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  16953933 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 16953868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 12582471 - 12582420
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12582471 cttgtgtaacaaaccacccaaattagggtttccataatcgtgtcacgttttt 12582420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 5980964 - 5981021
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  5980964 ttcttccttgtgaaacaaaccacccaaattagggtttccataatcgtgtcatgttttt 5981021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 10664055 - 10663990
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||| |||||||    
T  10664055 agagagatgagatcaggtctttcgagtcatctatgtttccctaattggtatactacacctattctt 10663990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 14421902 - 14421837
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| ||||||||| |||||||||| |||||||    
T  14421902 agagagatgagatcaggtctttcgaatcatctatgttcccctaattgatatactgcacctattctt 14421837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 25231237 - 25231172
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||| ||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  25231237 agagagttgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 25231172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 38248362 - 38248427
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||  |||||||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  38248362 agagagatgcgatcaggtctttcgaatcatctatgttcccctaattggtatattgcacatattctt 38248427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 18825850 - 18825913
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  18825850 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 18825913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 25591441 - 25591504
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    ||||||||||| ||||||| |||||||||| ||||||| |||||||||||||||||||| ||||    
T  25591441 aagagagatgagatcaggtgtttcgaatcatctatgttcccctaattggtatactgcacctatt 25591504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 36710599 - 36710662
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| |||||    
T  36710599 agagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctattc 36710662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 244 - 326
Target Start/End: Complemental strand, 25228096 - 25228016
Alignment:
Q  244 tttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||||||||||| ||| | |||||||||||| ||||||||||||| |||||||||||||| |||| |||| |||||||||||||    
T  25228096 tttttcttgcttcttgagcttgcttgtgaactcaaaaatatcat-aaaagactctaaaattgtgcaatg-cagactgtcatca 25228016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 25594619 - 25594685
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||| |||||||||||||||||| |||| || |||||||| ||||||||||| |||||||    
T  25594619 aagagagatgagatcaggtctttcgaatcatctatcttcccctaattagtatactgcacctattctt 25594685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 10498177 - 10498242
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  10498177 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 10498242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 17895369 - 17895433
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttttct 250  Q
    ||||||| ||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||    
T  17895369 aatcgtgacacgtttttcagtaatcgtgacacgatgccctcttttcagtttcttcagttttttct 17895433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 23597428 - 23597355
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatga 85  Q
    |||||||||| |||||||||||||||||||||||  |||  || ||||||||||||||| |||| |||||||||    
T  23597428 atttgattgcataaaattaaataacataaaataaagattgagtaagaaaatatagatttggttaaaaaatatga 23597355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 23619327 - 23619392
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  23619327 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 23619392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 33883329 - 33883378
Alignment:
Q  102 gtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  33883329 gtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 33883378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 45155232 - 45155297
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||| ||| |||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||    
T  45155232 agagagctgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacctattctt 45155297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 353 - 504
Target Start/End: Complemental strand, 16839420 - 16839268
Alignment:
Q  353 caacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctcacccc-aaa 451  Q
    ||||||| || |||||||||||||| | ||  |||||| ||||||||| ||| | |  | ||| ||  |||||||||| ||||||||||| ||||| |||    
T  16839420 caacaccttaaaccacaaactctccctctccatcaacatccgccaacatcacttaccaagtaaagcgatattaaactctctaattctccttacccccaaa 16839321  T
Q  452 ccaccaacctcctttctcaaacaaacaggattccagtcaacccaagttatttt 504  Q
    |||||||||||||| |||   ||||||| |||||| || ||||||| ||||||    
T  16839320 ccaccaacctccttactcctgcaaacagtattccattccacccaagatatttt 16839268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 18721258 - 18721309
Alignment:
Q  100 aggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  18721258 aggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 18721309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 18824357 - 18824420
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| ||||||| |||||||||| | ||||| |||||||||||||||||||| |||||    
T  18824357 agagagatgagatcaggtatttcgaatcatcgatgttcccctaattggtatactgcacctattc 18824420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 17931137 - 17931072
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| || ||||||||||||||| | |||||||| ||||||||||| ||||| |||||||    
T  17931137 agagagatgagattaggtctttcgaatcatcgatgtttccgtaattggtatattgcacctattctt 17931072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 21279732 - 21279797
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||  ||| |||||||||||||| | ||||| |||||||||||||||||||| |||||||    
T  21279732 agagagatgtgatcgggtctttcgaatcatcgatgttcccctaattggtatactgcacctattctt 21279797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 23643976 - 23643919
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcac 143  Q
    |||||||||| |||||||| ||||||||| | ||||| ||||||||||||||||||||    
T  23643976 agagagatgatatcaggtcgttcgaatcatcgatgttcccctaattggtatactgcac 23643919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 30785108 - 30785025
Alignment:
Q  56 agaaaatatagatttagttagaaaatatgaagagaga--tgaaatcaggtctttcgaatcacctatgtttccctaattggtata 137  Q
    |||||||| ||||| | | ||||||||||||||||||  ||| |||||||||||||||||  ||| ||| ||||||||||||||    
T  30785108 agaaaataaagattgattaagaaaatatgaagagagaggtgagatcaggtctttcgaatcctctaagttcccctaattggtata 30785025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 14589584 - 14589647
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| || |||| |||||||||| | ||||| |||||||||||||||||||| |||||    
T  14589584 agagagatgagattaggtatttcgaatcatcgatgttcccctaattggtatactgcacctattc 14589647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 263 - 326
Target Start/End: Original strand, 18826771 - 18826834
Alignment:
Q  263 ttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    ||||||||||| |||||| |||||||||||||||||||||||    |||||| |||||||||||    
T  18826771 ttgcttgtgaactcaaaattatcataaaaagactctaaaaatagcaaatgactgactgtcatca 18826834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 19793009 - 19792926
Alignment:
Q  245 ttttcttgctgcttaatctt-gcttgtgaattcaaaaatatcata-aaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||| || |||||||| ||||||||| |||||||||||||| ||||||||||||||||   ||||| | |||||||||||    
T  19793009 ttttcttgttgtttaatctttgcttgtgaactcaaaaatatcataaaaaagactctaaaaatagtgaatggccgactgtcatca 19792926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 44027070 - 44027121
Alignment:
Q  100 aggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||||||| ||||||| ||||||||| |||| |||||||||||||    
T  44027070 aggtctttcgaatcatctatgttcccctaattgatataatgcacatattctt 44027121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 30640587 - 30640541
Alignment:
Q  246 tttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaa 292  Q
    ||||||||||||||| |||||||||||| |||||| |||||||||||    
T  30640587 tttcttgctgcttaagcttgcttgtgaactcaaaagtatcataaaaa 30640541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 13197009 - 13196948
Alignment:
Q  90 agatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||| |||||||||||| ||||| |||||||  | ||||||||||||||||| |||||||    
T  13197009 agatgagatcaggtctttcaaatcatctatgttctcttaattggtatactgcacttattctt 13196948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 31284830 - 31284765
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||| ||||||||| ||||||| ||||||||||||||| |||| |||||||    
T  31284830 agagagatgagtttaggtcattcgaatcatctatgttcccctaattggtataccgcacctattctt 31284765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 33419812 - 33419747
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | |||||||||||||||  |||||| |||||||| ||||||||||| |||||||    
T  33419812 agagagatgagtttaggtctttcgaatcatttatgttcccctaatttgtatactgcacctattctt 33419747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 5613668 - 5613708
Alignment:
Q  73 ttagaaaatatgaagagagatgaaatcaggtctttcgaatc 113  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  5613668 ttagaaaatatggagagagatgagatcaggtctttcgaatc 5613708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 22173827 - 22173883
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatat 64  Q
    |||||||||||||| |||||||||||||||  ||||||  ||| |||||||||||||    
T  22173827 tttgatttgattgcataaaattaaataacaggaaataaagattcggttagaaaatat 22173883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 2560697 - 2560644
Alignment:
Q  98 tcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||| | ||| | ||||||| |||||||||||||||||| |||||||    
T  2560697 tcaggtctttcaagtcatcgatgtttctctaattggtatactgcacctattctt 2560644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 10663075 - 10663008
Alignment:
Q  262 cttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactgtcatcacct 329  Q
    |||||||||||| |||| | |||||| |||||||||||||||||   ||||||| ||||||||||||||    
T  10663075 cttgcttgtgaactcaaca-tatcatgaaaaagactctaaaaatagtgaatgactgactgtcatcacct 10663008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 331 - 367
Target Start/End: Original strand, 12332423 - 12332459
Alignment:
Q  331 cctcctcaccatatttcgcaaccaacaccctatacca 367  Q
    |||||||||||||| |||| |||||||||||||||||    
T  12332423 cctcctcaccatatctcgccaccaacaccctatacca 12332459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 17858205 - 17858153
Alignment:
Q  445 ccccaaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaag 497  Q
    |||||||||||||||||||||  ||| ||||| ||  ||||||||||||||||    
T  17858205 ccccaaaccaccaacctccttattcatacaaatagagttccagtcaacccaag 17858153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 22223291 - 22223331
Alignment:
Q  287 taaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    ||||||||||| |||||||||  ||||||||||||||||||    
T  22223291 taaaaagactcaaaaaatgtgatatgacagactgtcatcac 22223331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 22229633 - 22229673
Alignment:
Q  287 taaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    ||||||||||| |||||||||  ||||||||||||||||||    
T  22229633 taaaaagactcaaaaaatgtgatatgacagactgtcatcac 22229673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 302 - 171
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||| ||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  302 tttgatttgattgcataaaatgaaataacataaaataaagattcggttagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttt 203  T
Q  108 cgaatcacctatgtttccctaattggtatact 139  Q
    |||||||  |||||| ||||||||||||||||    
T  202 cgaatcatatatgttcccctaattggtatact 171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 92; Significance: 2e-44; HSPs: 3)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 5589 - 5446
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  ||| ||||||||||||||||||  |||||||||||||||||||||||| |||||||||||    
T  5589 tttgatttgattgcataaaattaaataacataaaataaagattcggttagaaaatatagattcggttagaaaatatgaagagagatgagatcaggtcttt 5490  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| |||| || ||||||||| |||| ||||| |||||||    
T  5489 cgaatcatctatattcccctaattgatatagtgcacctattctt 5446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 188 - 326
Target Start/End: Complemental strand, 4713 - 4563
Alignment:
Q  188 aatcgtgtcacgttttt-cagtaatcgtgacacgatgcc--tttttcagcttcttcagttttttcttg---------ctgcttaatcttgcttgtgaatt 275  Q
    ||||||| ||||||||| || ||||||||||||||||||  ||||| || ||||||||||||||||||         |||||||| |||||||||||| |    
T  4713 aatcgtgacacgttttttcaataatcgtgacacgatgcccttttttaagtttcttcagttttttcttgattttcttgctgcttaagcttgcttgtgaact 4614  T
Q  276 caaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||||||||||||||||||   ||||||| |||||||||||    
T  4613 caaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 4563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 4818 - 4767
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  4818 cttgtgtaataaaccacccaaattagggtttccataatcgtgtcacgttttt 4767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 20185983 - 20185840
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||| ||||| |||||||||||||||||||||||  ||| |||| |||||||||||||| |||||||||||||||||||||| | ||||||| |||    
T  20185983 tttgatttcattgcataaaattaaataacataaaataaagattgggtttgaaaatatagatttggttagaaaatatgaagagagataagatcaggttttt 20185884  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||    
T  20185883 cgaatcatctatgttcccctaattggtatactgcacctattctt 20185840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 22150008 - 22150151
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||| ||||| |||||||||||||||||||||||  ||| |||| |||||||||||||| |||||||||||||||||||||| | ||||||| |||    
T  22150008 tttgatttcattgcataaaattaaataacataaaataaagattgggtttgaaaatatagatttggttagaaaatatgaagagagataagatcaggttttt 22150107  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||    
T  22150108 cgaatcatctatgttcccctaattggtatactgcacctattctt 22150151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 10290211 - 10290068
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||||||||||||||||||||  |||| |||||||||||| ||||| ||||| |||||| ||||||||| | |||||||||||    
T  10290211 tttgatttgattgcataaaattaaataacataaaataaagatttagttagaaaatatggatttggttagtaaatataaagagagataagatcaggtcttt 10290112  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||    
T  10290111 cgaatcatctatgttccccgaattggtatactgcacttattctt 10290068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 23842684 - 23842826
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||| | ||||| |||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||    
T  23842684 tttgatctaattgcataaaattaaataacataaaataaagattcggttagaaaatatagatttggttagaaaatatgaagagagatgagatcagttcttt 23842783  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||| | ||||||| ||||||||| |||| ||||| |||||||    
T  23842784 cgaat-atctatgttcccctaattgttatattgcacttattctt 23842826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 23848010 - 23847865
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||| | ||||||||||||| |||||||||  ||| ||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||    
T  23848010 tttgatttgatttcataaaattaaataatataaaataaagattcggttagaaaatatagatttggttagaaaataagaagagagatgagatcaggtcttt 23847911  T
Q  108 cgaatcacc---tatgtttccctaattggtatactgcacatattct 150  Q
    ||||||| |   ||| || |||||||||||||||||||| ||||||    
T  23847910 cgaatcatcttttatattcccctaattggtatactgcacctattct 23847865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 30655681 - 30655540
Alignment:
Q  13 tttgattgcgtaaaattaaataacataaaataattatttggttagaaaa---tatagatttagttagaaaatatgaagagagatgaaatcaggtctttcg 109  Q
    |||||||||  ||||||||||||||||||||||  |||   ||| ||||   ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  30655681 tttgattgcaaaaaattaaataacataaaataaagattgatttaaaaaaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcg 30655582  T
Q  110 aatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||| ||||||| |||||||||||||||||||| |||||||    
T  30655581 aatcatctatgttcccctaattggtatactgcacttattctt 30655540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 5737974 - 5738112
Alignment:
Q  18 ttgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacc- 116  Q
    |||| |||||||||||||||||||||||  |||  || ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |     
T  5737974 ttgcataaaattaaataacataaaataaagattgagtaagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttcgaatcatct 5738073  T
Q  117 ----tatgtttccctaattggtatactgcacatattctt 151  Q
        |||||| |||||||||||||||||||| |||||||    
T  5738074 atgttatgttcccctaattggtatactgcacctattctt 5738112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 9953117 - 9953036
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9953117 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtgaaatgacagactgtcatca 9953036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 188 - 326
Target Start/End: Complemental strand, 10289334 - 10289186
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcc--tttttcagcttcttcagttttt--------tcttgctgcttaatcttgcttgtgaattca 277  Q
    ||||||||||||||||||||||||| ||||||||| ||  |||||||| |||||| ||||||        ||||| |||||||||||||||||||| |||    
T  10289334 aatcgtgtcacgtttttcagtaatcttgacacgatccccttttttcagtttcttcggtttttcttgcttttcttgttgcttaatcttgcttgtgaactca 10289235  T
Q  278 aaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||||||||||||||||   |||||||  ||||||||||    
T  10289234 aaaatatcataaaaagactctaaaaatagcgaatgacttactgtcatca 10289186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 186 - 326
Target Start/End: Original strand, 28666044 - 28666176
Alignment:
Q  186 ataatcgtgtcacgtttttcagtaatcgtgacacgatgcctttttcagcttcttcagttttttcttgctgcttaatcttgcttgtgaattcaaaaatatc 285  Q
    ||||||||| ||||||||||||| ||||||||| ||| || |||       |||||||||| ||||||||||||| |||||||||||| |||||||||||    
T  28666044 ataatcgtgacacgtttttcagttatcgtgacatgattcccttt-------cttcagtttt-tcttgctgcttaagcttgcttgtgaactcaaaaatatc 28666135  T
Q  286 ataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||||||||   ||||||| |||||||||||    
T  28666136 ataaaaagactctaaaaataacgaatgactgactgtcatca 28666176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 17106545 - 17106638
Alignment:
Q  58 aaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||| |||||  |||||||||||||||||||||||| |||| ||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  17106545 aaaataaagattcggttagaaaatatgaagagagatgagatcaagtctttcgaatcatctatgttcccctaattggtatattgcacatattctt 17106638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 353 - 501
Target Start/End: Original strand, 2540551 - 2540700
Alignment:
Q  353 caacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctca-ccccaaa 451  Q
    |||||||||| |||||||||| ||||| ||  |||||| || |||||||||| ||| |||||  ||| ||||||| || ||||||||||| | |||||||    
T  2540551 caacaccctaaaccacaaactatccttatctatcaacaacctccaacaccactttcctaatagagcattattaaattctctaattctccttatccccaaa 2540650  T
Q  452 ccaccaacctcctttctcaaacaaacaggattccagtcaacccaagttat 501  Q
    |||||||||||||| || |||||||||  ||| ||||||||||| |||||    
T  2540651 ccaccaacctccttacttaaacaaacaaaatttcagtcaacccatgttat 2540700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 151
Target Start/End: Original strand, 9839345 - 9839422
Alignment:
Q  73 ttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||||| ||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  9839345 ttagaaaatatga-gagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 9839422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 11729230 - 11729327
Alignment:
Q  13 tttgattgcgtaaaattaaataacataaaataattatttggttagaaaa--tatagatttagttagaaaatatgaagagagatgaaatcaggtctttc 108  Q
    ||||||||| |||||||||||||||||||||||  |||   ||| ||||  ||||||||| |||||||||||||||||||||||| ||||||||||||    
T  11729230 tttgattgcataaaattaaataacataaaataaagattgatttaaaaaaaatatagatttggttagaaaatatgaagagagatgagatcaggtctttc 11729327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 10289445 - 10289388
Alignment:
Q  147 ttcttccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  10289445 ttcttccttgtgtaacaaaccaccaaaattagggtttccataatcgtgtcacgttttt 10289388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 11402418 - 11402353
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  11402418 agagagatgagatcaggtctttcgattcatctatgtttccctaattggtatactgcacctattctt 11402353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 9954125 - 9954059
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||| ||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  9954125 aagagagatgagatcagctctttcgaatcatctatgttcccctaattggtatactgcacctattctt 9954059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 465
Target Start/End: Original strand, 34600866 - 34600976
Alignment:
Q  356 caccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctca-ccccaaacca 454  Q
    ||||||| |||||| ||||||| | ||   ||||| ||||||||||||| | ||||| || |||||||||||||||||||||||||| | ||||||||||    
T  34600866 caccctaaaccacatactctccctctccaccaacatccgccaacaccacttccttaacaacgcactattaaactccctaattctccttacccccaaacca 34600965  T
Q  455 ccaacctcctt 465  Q
    | |||||||||    
T  34600966 ctaacctcctt 34600976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 356 - 465
Target Start/End: Original strand, 34627411 - 34627521
Alignment:
Q  356 caccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctca-ccccaaacca 454  Q
    ||||||| |||||| ||||||| | ||   ||||| ||||||||||||| | ||||| || |||||||||||||||||||||||||| | ||||||||||    
T  34627411 caccctaaaccacatactctccctctccaccaacatccgccaacaccacttccttaacaacgcactattaaactccctaattctccttacccccaaacca 34627510  T
Q  455 ccaacctcctt 465  Q
    | |||||||||    
T  34627511 ctaacctcctt 34627521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 2379391 - 2379326
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||| ||||| ||||||| |||||||||||||||||||| |||||||    
T  2379391 agagagatgagatcaggtctttcaaatcatctatgttcccctaattggtatactgcacctattctt 2379326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 356 - 516
Target Start/End: Original strand, 10304142 - 10304300
Alignment:
Q  356 caccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctca-ccccaaacca 454  Q
    |||||||||||||||||||||||| ||   ||||| | ||||||||||| | |  ||||| |  | ||||||||| ||||||||||| | ||||||||||    
T  10304142 caccctataccacaaactctccttatccaccaacaactgccaacaccacttccccaataaagtgcaattaaactctctaattctccttacccccaaacca 10304241  T
Q  455 ccaacctcctttctcaaacaaacaggattccagtcaacccaagttatttt-ttgtggtcgtca 516  Q
    ||||||||     ||||||||||||  ||||| |||||||||||||||||  |||||||||||    
T  10304242 ccaacctc----ttcaaacaaacagagttccaatcaacccaagttattttcctgtggtcgtca 10304300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 14281483 - 14281548
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||| ||||||||| |||||||    
T  14281483 agagagatgacatcaggtctttcgaatcatctatgttcccctaattgggatactgcacctattctt 14281548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 24400340 - 24400275
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  24400340 agagagatgagtttaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 24400275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 24410459 - 24410394
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  24410459 agagagatgagtttaggtctttcgaatcatctatgtttccctaattggtatactgcacctattctt 24410394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 26942398 - 26942461
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||| ||| ||||||| |||||||||||||||||||| |||||    
T  26942398 agagagatgagatcaggtctttcgattcatctatgttcccctaattggtatactgcacctattc 26942461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 28665920 - 28665971
Alignment:
Q  153 cttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  28665920 cttgtgtaacaaaccacctaaattagggtttccataatcgtgtcacgttttt 28665971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 3596744 - 3596809
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| || |||||||||||||||  |||||| |||||||||||||||||||| |||||||    
T  3596744 agagagatgagattaggtctttcgaatcatttatgttcccctaattggtatactgcacctattctt 3596809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 4512637 - 4512572
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  4512637 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 4512572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 6513417 - 6513352
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| |||| || ||||||||| |||||||||| |||||||    
T  6513417 agagagatgagatcaggtctttcgaatcatctatattcccctaattgatatactgcacctattctt 6513352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 13005350 - 13005285
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||| ||||| ||||||| |||||||||||||||| ||| |||||||    
T  13005350 agagagatgagatcaggtctttcaaatcatctatgttcccctaattggtatacttcacctattctt 13005285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 18855988 - 18856053
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  18855988 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 18856053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 19476163 - 19476098
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||| |  |||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  19476163 agagagatgaattttggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 19476098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 22561126 - 22561191
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||| ||||| ||| ||| |||||||||||||||||||| |||||||    
T  22561126 agagagatgagatcaggtctttcaaatcatctacgttcccctaattggtatactgcacctattctt 22561191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 23384715 - 23384780
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| || ||||||||||| ||| ||||||| |||||||||||||||||||| |||||||    
T  23384715 agagagatgagattaggtctttcgattcatctatgttcccctaattggtatactgcacctattctt 23384780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 26896222 - 26896287
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  26896222 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 26896287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 34722173 - 34722253
Alignment:
Q  386 caacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctca-ccccaaaccaccaacctcctt 465  Q
    ||||| ||||||||||||| | ||||| || |||||||||||||||||||||||||| | ||||||||||  |||||||||    
T  34722173 caacatccgccaacaccacttccttaacaacgcactattaaactccctaattctccttacccccaaaccagtaacctcctt 34722253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 292
Target Start/End: Complemental strand, 13004481 - 13004434
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaa 292  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  13004481 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa 13004434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 13947165 - 13947114
Alignment:
Q  100 aggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  13947165 aggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 13947114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 7128460 - 7128398
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  7128460 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtataatgcacatatt 7128398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 32109830 - 32109764
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||| |||||||||||||||||| | ||||| |||||||| |||| |||||| |||||||    
T  32109830 aagagagatgagatcaggtctttcgaatcatcaatgttcccctaatttgtatgctgcacctattctt 32109764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 2372414 - 2372349
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||| ||| ||||  |||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  2372414 agagagctgagatcatctctttcgaatcatctatgttcccctagttggtatactgcacatattctt 2372349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 24155329 - 24155394
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | |||||||||||||||  |||||| |||||||||||||||||||| |||||||    
T  24155329 agagagatgagtttaggtctttcgaatcatatatgttcccctaattggtatactgcacctattctt 24155394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 28107750 - 28107803
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatact 139  Q
    |||||||||| ||||||| |||||||||| ||||||| ||||||||||||||||    
T  28107750 agagagatgatatcaggtatttcgaatcatctatgttcccctaattggtatact 28107803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 516
Target Start/End: Original strand, 32197862 - 32197959
Alignment:
Q  421 tattaaactccctaattctcctca-ccccaaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaagttatttt-ttgtggtcgtca 516  Q
    |||||||||||||||||||||| | ||||||||| ||||||||||| | |  ||| |||| ||||||||| ||||||| ||||||  |||||||||||    
T  32197862 tattaaactccctaattctcctaacccccaaaccgccaacctccttaccccgacagacagtattccagtccacccaagatattttcatgtggtcgtca 32197959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 22561782 - 22561834
Alignment:
Q  152 ccttgtgtaacaaaccacccaaattaaggtttccataatcgtgtcacgttttt 204  Q
    |||||||||||||||||||||||||| |||||||| ||| ||| |||||||||    
T  22561782 ccttgtgtaacaaaccacccaaattagggtttccaaaattgtgccacgttttt 22561834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 11125662 - 11125725
Alignment:
Q  88 agagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||  |||| ||||||||||||| | ||||| |||||||||||||||||||| |||||||    
T  11125662 agagatgggatcaagtctttcgaatcatcgatgttcccctaattggtatactgcacctattctt 11125725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 17106514 - 17106551
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataa 45  Q
    |||||||||||||| |||||||||||||||||||||||    
T  17106514 tttgatttgattgcataaaattaaataacataaaataa 17106551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 352 - 464
Target Start/End: Original strand, 18016708 - 18016821
Alignment:
Q  352 ccaacaccctataccacaaactctccttttcagtcaacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctcaccccaaa 451  Q
    |||||||||||||||||||||| ||||| ||   ||||||||||||||||||| | | |||||| |    |||||| ||  |||||||||| ||||||||    
T  18016708 ccaacaccctataccacaaactttccttctccaccaacacccgccaacaccacttccctaataacgttaaattaaattctttaattctccttaccccaaa 18016807  T
Q  452 -ccaccaacctcct 464  Q
     || ||||||||||    
T  18016808 tcctccaacctcct 18016821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 17713045 - 17712993
Alignment:
Q  445 ccccaaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaag 497  Q
    ||||||||||||||||||||| || ||||||||||  ||||| ||||||||||    
T  17713045 ccccaaaccaccaacctccttacttaaacaaacagagttccaatcaacccaag 17712993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 390
Target Start/End: Original strand, 19154280 - 19154344
Alignment:
Q  326 acctccctcctcaccatatttcgcaaccaacaccctataccacaaactctccttttcagtcaaca 390  Q
    |||||||||||| |||||| ||||   ||||||||||||||||| ||||| ||||| ||||||||    
T  19154280 acctccctcctctccatatctcgccgacaacaccctataccacatactcttctttttagtcaaca 19154344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 304
Target Start/End: Complemental strand, 20181343 - 20181295
Alignment:
Q  256 cttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 304  Q
    ||||| |||||||||||| |||||||||||| |||| ||||||||||||    
T  20181343 cttaagcttgcttgtgaactcaaaaatatcacaaaaggactctaaaaat 20181295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 22154648 - 22154696
Alignment:
Q  256 cttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 304  Q
    ||||| |||||||||||| |||||||||||| |||| ||||||||||||    
T  22154648 cttaagcttgcttgtgaactcaaaaatatcacaaaaggactctaaaaat 22154696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 33753621 - 33753569
Alignment:
Q  445 ccccaaaccaccaacctcctttctcaaacaaacaggattccagtcaacccaag 497  Q
    ||||||||||||| ||||||| |||| |||||||| ||| |||||||||||||    
T  33753621 ccccaaaccaccagcctccttactcatacaaacagtatttcagtcaacccaag 33753569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 1125697 - 1125763
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||| | || |||||||||||||  ||||||  |||||||||||||||| || |||||||    
T  1125697 aagagagatgagagcatgtctttcgaatcatttatgttctcctaattggtatactggacctattctt 1125763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 445 - 495
Target Start/End: Complemental strand, 19616329 - 19616279
Alignment:
Q  445 ccccaaaccaccaacctcctttctcaaacaaacaggattccagtcaaccca 495  Q
    |||||||||||||||||||||||||| ||||| ||  | ||||||||||||    
T  19616329 ccccaaaccaccaacctcctttctcagacaaatagtttcccagtcaaccca 19616279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 45
Target Start/End: Original strand, 11188097 - 11188130
Alignment:
Q  12 atttgattgcgtaaaattaaataacataaaataa 45  Q
    |||||||||| |||||||||||||||||||||||    
T  11188097 atttgattgcataaaattaaataacataaaataa 11188130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 14968822 - 14968782
Alignment:
Q  287 taaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||||||||||||||||||  ||||| ||||||||||||    
T  14968822 taaaaagactctaaaaatgtgatatgacggactgtcatcac 14968782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 331 - 367
Target Start/End: Original strand, 19350519 - 19350555
Alignment:
Q  331 cctcctcaccatatttcgcaaccaacaccctatacca 367  Q
    |||||||||||||| |||| |||||||||||||||||    
T  19350519 cctcctcaccatatctcgccaccaacaccctatacca 19350555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 23008250 - 23008174
Alignment:
Q  58 aaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggt 134  Q
    |||||| ||||||  || ||||||| |||||||||||| |||| ||||||||||||  ||  |||||| ||||||||    
T  23008250 aaaataaagatttgtttggaaaataagaagagagatgagatcaagtctttcgaatcctctgagtttccataattggt 23008174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 58 - 134
Target Start/End: Original strand, 23780114 - 23780190
Alignment:
Q  58 aaaatatagatttagttagaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggt 134  Q
    |||||| ||||||  || ||||||| |||||||||||| |||| ||||||||||||  ||  |||||| ||||||||    
T  23780114 aaaataaagatttgtttggaaaataagaagagagatgagatcaagtctttcgaatcctctgagtttccataattggt 23780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 28230742 - 28230690
Alignment:
Q  100 aggtctttcgaatcacctatgtttccc-taattggtatactgcacatattctt 151  Q
    |||||||||||||||  |||||| ||| ||||||||||||||||| |||||||    
T  28230742 aggtctttcgaatcatttatgttacccctaattggtatactgcacctattctt 28230690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 331 - 367
Target Start/End: Complemental strand, 29976573 - 29976537
Alignment:
Q  331 cctcctcaccatatttcgcaaccaacaccctatacca 367  Q
    |||||||||||||| |||| |||||||||||||||||    
T  29976573 cctcctcaccatatctcgccaccaacaccctatacca 29976537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 88; Significance: 5e-42; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 8 - 151
Target Start/End: Complemental strand, 198382 - 198241
Alignment:
Q  8 tttgatttgattgcgtaaaattaaataacataaaataattatttggttagaaaatatagatttagttagaaaatatgaagagagatgaaatcaggtcttt 107  Q
    |||||||||||||| |||||| ||||||||||||||||  |||   ||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  198382 tttgatttgattgcataaaat-aaataacataaaataaagattca-ttagaaaatatagatttggttagaaaatatgaagagagatgagatcaggtcttt 198285  T
Q  108 cgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||    
T  198284 cgaatcatctatgttcccctaattggtatactgcacctattctt 198241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 197323 - 197242
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  197323 ttttcttgctgcttatgcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 197242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 71; Significance: 7e-32; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 246269 - 246351
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  246269 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagaccgtcatcac 246351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 293182 - 293117
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||| ||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  293182 agagagatgagatcaagtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 293117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 60; Significance: 3e-25; HSPs: 4)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 188 - 327
Target Start/End: Original strand, 911 - 1061
Alignment:
Q  188 aatcgtgtcacgtttttcagtaatcgtgacacgatgcctt--tttcagcttcttcagtttttt---------cttgctgcttaatcttgcttgtgaattc 276  Q
    ||||||| ||| |||||||||||||||||||||||||| |  |||||| ||||||||||||||         |||||||||||| |||||||||||| ||    
T  911 aatcgtgacacatttttcagtaatcgtgacacgatgccctcttttcagtttcttcagttttttcttgcttttcttgctgcttaagcttgcttgtgaactc 1010  T
Q  277 aaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||||||||||||| ||||||||| |   ||||||| ||||||||||||    
T  1011 aaaaatatcataaaaatactctaaaagtagcgaatgactgactgtcatcac 1061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 4339 - 4396
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaa 302  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  4339 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaa 4396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 245 - 302
Target Start/End: Original strand, 11469 - 11526
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaa 302  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  11469 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaa 11526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 17 - 89
Alignment:
Q  77 aaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||| | |||||||||| |||||||||||||||||| | ||||| || ||||||||||||||||| |||||    
T  17 aaaataaggagagagatgagatcaggtctttcgaatcatcgatgttcccttaattggtatactgcacctattc 89  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 85 - 151
Target Start/End: Original strand, 5360 - 5426
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  5360 aagagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 5426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 6472 - 6555
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactgtcatcac 327  Q
    |||||||| ||||||| ||||| |||||| ||||||||||||| |||||||||||||||||   ||||||| ||||||||||||    
T  6472 ttttcttgttgcttaagcttgcctgtgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatcac 6555  T

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Target: scaffold1993 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1993
Description:

Target: scaffold1993; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 1126 - 1045
Alignment:
Q  245 ttttcttgctgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 326  Q
    |||||||| ||||||| ||| ||| |||| || |||||||||||||||||||||||||||||| |||||| |||||||||||    
T  1126 ttttcttggtgcttaagcttccttatgaactccaaaatatcataaaaagactctaaaaatgtgaaatgactgactgtcatca 1045  T

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Target: scaffold0427 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 3751 - 3816
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  3751 agagagatgagatcaggtctttcgaatcatctatgttaccctaattggtatactgcacctattctt 3816  T

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Target: scaffold0045 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 89929 - 89866
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattc 149  Q
    |||||||||| |||||||||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  89929 agagagatgagatcaggtctttcgaatcatctaagttcccctaattggtatactgcacatattc 89866  T

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Target: scaffold2073 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold2073
Description:

Target: scaffold2073; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 834 - 895
Alignment:
Q  90 agatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||| |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  834 agatgatatcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 895  T

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Target: scaffold0690 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 7675 - 7740
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||    
T  7675 agagagatgagatcaggtctttcgaatcatctatgttcccctaattggtatattgcacctattctt 7740  T

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Target: scaffold0412 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 290 - 225
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||| ||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  290 agagagatgagatcaagtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 225  T

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Target: scaffold0250 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 19555 - 19490
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| ||||||| | |||||||||||||||||| |||||||    
T  19555 agagagatgagatcaggtctttcgaatcatctatgttcctctaattggtatactgcacctattctt 19490  T

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Target: scaffold0126 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 14281 - 14344
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    ||||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||| ||||    
T  14281 aagagagatgagatcaggtctttcgaatcatcgatgttcccctaattggtatactgcacctatt 14344  T

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Target: scaffold1785 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 55 - 1
Alignment:
Q  97 atcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  55 atcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 1  T

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Target: scaffold1208 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 345 - 279
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||| || ||||| |||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  345 aagagagacgagatcagatctttcgaatcatctatgttcccctaattggtatactgcacctattctt 279  T

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Target: scaffold0191 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 4076 - 4010
Alignment:
Q  85 aagagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||||  | ||||||||||||||| ||||||||| |||||||||||||||||| |||||||    
T  4076 aagagagatgagtttaggtctttcgaatcatctatgtttctctaattggtatactgcacctattctt 4010  T

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Target: scaffold0035 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 97 - 151
Target Start/End: Complemental strand, 62665 - 62611
Alignment:
Q  97 atcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  62665 atcaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 62611  T

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Target: scaffold0035; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 64018 - 63953
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| ||||||| |||||||||||| |||||||    
T  64018 agagagatgagtttaggtctttcgaatcatctatgttcccctaatcggtatactgcacctattctt 63953  T

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Target: scaffold0321 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 2968 - 3033
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||||||||||||| |||||||    
T  2968 agagagatgagtttaggtctttcgaatcatctatgttcccctaattggtatactgcacctattctt 3033  T

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Target: scaffold0233 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 386 - 495
Target Start/End: Complemental strand, 11058 - 10948
Alignment:
Q  386 caacacccgccaacaccacattcttaataatgcactattaaactccctaattctcctcac-cccaaaccaccaacctcctttctcaaacaaacaggattc 484  Q
    ||||| ||||||||||||| | | |||||| ||| |||| ||| ||||||||||||| || |||||||||||||||||||| |||  ||| ||||  |||    
T  11058 caacaaccgccaacaccacttccctaataaagcaatattgaacaccctaattctcctaacacccaaaccaccaacctccttactccgacagacagtgttc 10959  T
Q  485 cagtcaaccca 495  Q
    || ||||||||    
T  10958 caatcaaccca 10948  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 241659 - 241597
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatatt 148  Q
    ||||| |||| ||||| |||||||||||| ||||||| |||||||||||||||||||| ||||    
T  241659 agagatatgagatcagatctttcgaatcatctatgttcccctaattggtatactgcacctatt 241597  T

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Target: scaffold0066 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 57552 - 57617
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||| |||||||||||||||||| |||||||  | ||||||||||| ||||| |||||||    
T  57552 agagagatgagatcaggtctttcgaatcatctatgttcacataattggtatattgcacctattctt 57617  T

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Target: scaffold0048 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 15571 - 15506
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| |||||||||| ||||||||| |||||||    
T  15571 agagagatgagtttaggtctttcgaatcatctatgttcccctaattgggatactgcacctattctt 15506  T

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Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 19439 - 19374
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| |||||||  ||| ||||||||||||||| |||||||    
T  19439 agagagatgagtttaggtctttcgaatcatctatgttcacctcattggtatactgcacctattctt 19374  T

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Target: scaffold0084; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 29524 - 29459
Alignment:
Q  86 agagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||||  | ||||||||||||||| ||||||| ||||||||  |||||||||| |||||||    
T  29524 agagagatgagtttaggtctttcgaatcatctatgttcccctaatttttatactgcacctattctt 29459  T

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Target: scaffold1063 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 2659 - 2595
Alignment:
Q  87 gagagatgaaatcaggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    ||||||||| |  ||||||||||| ||| | ||||| |||||||||||||||||||| |||||||    
T  2659 gagagatgagactaggtctttcgagtcatcaatgttcccctaattggtatactgcacctattctt 2595  T

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Target: scaffold0225 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 404
Target Start/End: Complemental strand, 5628 - 5576
Alignment:
Q  352 ccaacaccctataccacaaactctccttttcagtcaacacccgccaacaccac 404  Q
    ||||||||||| |||||||||||||||| ||   |||||||||||||||||||    
T  5628 ccaacaccctaaaccacaaactctccttctccaccaacacccgccaacaccac 5576  T

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Target: scaffold0065 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Original strand, 58661 - 58709
Alignment:
Q  103 tctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||||||||||| ||||||| |||||||| ||||||||||| |||||||    
T  58661 tctttcgaatcatctatgttcccctaatttgtatactgcacctattctt 58709  T

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Target: scaffold0218 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 10554 - 10503
Alignment:
Q  100 aggtctttcgaatcacctatgtttccctaattggtatactgcacatattctt 151  Q
    |||| |||||||||| | ||||| |||||||||||||||||||| |||||||    
T  10554 aggtatttcgaatcatcgatgttcccctaattggtatactgcacctattctt 10503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 118399 - 118473
Alignment:
Q  76 gaaaatatgaagagagatgaaatcaggtctttcgaatcacctatgtttccc-taattggtatactgcacatattctt 151  Q
    ||||| |||| ||||||||| ||||||||||||||||  ||| |||||||| ||||||||  ||||||| |||||||    
T  118399 gaaaagatgaggagagatgatatcaggtctttcgaat--cctctgtttcccttaattggtccactgcacctattctt 118473  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 31240 - 31188
Alignment:
Q  100 aggtctttcgaatcacctatgtttccc-taattggtatactgcacatattctt 151  Q
    |||||||||||||||  |||||| ||| ||||||||||||||||| |||||||    
T  31240 aggtctttcgaatcatttatgttacccctaattggtatactgcacctattctt 31188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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