View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17956_low_5 (Length: 555)

Name: NF17956_low_5
Description: NF17956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17956_low_5
NF17956_low_5
[»] chr5 (93 HSPs)
chr5 (175-539)||(6326109-6326480)
chr5 (125-319)||(6316795-6316988)
chr5 (318-454)||(6247590-6247730)
chr5 (56-137)||(6326029-6326110)
chr5 (358-454)||(21191051-21191147)
chr5 (363-481)||(21522691-21522809)
chr5 (363-481)||(21533257-21533375)
chr5 (171-288)||(6306905-6307022)
chr5 (363-454)||(19579669-19579760)
chr5 (319-452)||(24906252-24906390)
chr5 (378-461)||(22013375-22013458)
chr5 (328-479)||(17176991-17177139)
chr5 (362-479)||(15382420-15382539)
chr5 (358-442)||(21576740-21576824)
chr5 (363-439)||(39698524-39698600)
chr5 (363-454)||(13287399-13287490)
chr5 (364-479)||(36642763-36642877)
chr5 (358-479)||(6770486-6770605)
chr5 (357-461)||(19820390-19820492)
chr5 (370-442)||(14674249-14674321)
chr5 (363-454)||(37328844-37328935)
chr5 (313-438)||(10298553-10298675)
chr5 (321-457)||(16203746-16203889)
chr5 (319-427)||(15883982-15884096)
chr5 (382-452)||(19552562-19552632)
chr5 (370-436)||(31084309-31084375)
chr5 (380-447)||(15410465-15410532)
chr5 (363-454)||(21541998-21542089)
chr5 (358-433)||(33178014-33178089)
chr5 (358-437)||(42893345-42893424)
chr5 (371-442)||(43001780-43001851)
chr5 (485-539)||(6316994-6317048)
chr5 (384-454)||(21137657-21137727)
chr5 (358-460)||(26312731-26312833)
chr5 (377-427)||(27932230-27932280)
chr5 (363-449)||(41633708-41633794)
chr5 (378-476)||(41995417-41995515)
chr5 (380-454)||(42469189-42469263)
chr5 (318-368)||(43564951-43565001)
chr5 (358-427)||(28588669-28588738)
chr5 (318-425)||(38464312-38464426)
chr5 (378-437)||(3966488-3966547)
chr5 (371-451)||(4105228-4105310)
chr5 (318-361)||(14873599-14873642)
chr5 (387-454)||(41558707-41558774)
chr5 (380-478)||(26205777-26205875)
chr5 (363-424)||(7677703-7677764)
chr5 (358-435)||(7997162-7997238)
chr5 (358-415)||(21194200-21194257)
chr5 (364-437)||(21351906-21351979)
chr5 (378-422)||(6471904-6471948)
chr5 (378-449)||(14422877-14422946)
chr5 (390-478)||(17122993-17123080)
chr5 (319-367)||(19820328-19820376)
chr5 (378-422)||(24273045-24273089)
chr5 (378-422)||(24389125-24389169)
chr5 (358-454)||(30502383-30502479)
chr5 (358-454)||(30542726-30542822)
chr5 (367-454)||(22299485-22299571)
chr5 (380-411)||(31264449-31264480)
chr5 (319-442)||(34879330-34879452)
chr5 (319-362)||(39698628-39698671)
chr5 (363-410)||(41558654-41558701)
chr5 (357-411)||(2548398-2548452)
chr5 (378-436)||(6035469-6035526)
chr5 (318-348)||(7218217-7218247)
chr5 (381-443)||(9449448-9449510)
chr5 (319-353)||(17123132-17123166)
chr5 (380-442)||(19168838-19168900)
chr5 (378-416)||(21194138-21194176)
chr5 (319-353)||(21576685-21576719)
chr5 (319-353)||(22423764-22423798)
chr5 (364-449)||(30135286-30135372)
chr5 (319-353)||(35017128-35017162)
chr5 (322-368)||(39268541-39268587)
chr5 (380-414)||(43208291-43208325)
chr5 (327-368)||(17088361-17088402)
chr5 (378-411)||(25863215-25863248)
chr5 (388-449)||(26716117-26716178)
chr5 (388-449)||(26985857-26985918)
chr5 (358-442)||(43564863-43564945)
chr5 (380-424)||(2577197-2577241)
chr5 (378-454)||(6401466-6401542)
chr5 (319-367)||(7677787-7677835)
chr5 (318-362)||(15086554-15086598)
chr5 (379-411)||(19438354-19438386)
chr5 (321-353)||(21190998-21191030)
chr5 (319-367)||(21194063-21194111)
chr5 (378-446)||(22423827-22423895)
chr5 (378-438)||(30098310-30098370)
chr5 (318-358)||(39758340-39758380)
chr5 (378-422)||(41091272-41091316)
chr5 (321-353)||(43001890-43001922)
[»] chr6 (109 HSPs)
chr6 (319-479)||(7938059-7938219)
chr6 (363-477)||(16766642-16766756)
chr6 (363-449)||(12696297-12696383)
chr6 (358-454)||(34595102-34595198)
chr6 (318-478)||(426477-426629)
chr6 (358-454)||(7977825-7977921)
chr6 (358-478)||(8776968-8777088)
chr6 (363-479)||(9107370-9107486)
chr6 (319-478)||(9027122-9027286)
chr6 (363-461)||(8365519-8365617)
chr6 (320-449)||(31959132-31959268)
chr6 (322-422)||(9025448-9025553)
chr6 (361-461)||(853857-853957)
chr6 (358-442)||(17841584-17841668)
chr6 (358-442)||(28152079-28152162)
chr6 (319-457)||(6389708-6389851)
chr6 (378-461)||(9658841-9658923)
chr6 (363-449)||(10770674-10770760)
chr6 (338-427)||(21924910-21924999)
chr6 (365-449)||(16833281-16833365)
chr6 (365-449)||(17435172-17435256)
chr6 (378-461)||(3398580-3398662)
chr6 (319-454)||(5732474-5732601)
chr6 (370-479)||(1681701-1681810)
chr6 (378-479)||(34290092-34290193)
chr6 (358-438)||(7265588-7265668)
chr6 (378-446)||(13851712-13851780)
chr6 (358-422)||(28715295-28715359)
chr6 (378-460)||(6665177-6665257)
chr6 (378-457)||(9629348-9629427)
chr6 (358-433)||(19040341-19040416)
chr6 (378-460)||(7996393-7996475)
chr6 (378-460)||(8022326-8022408)
chr6 (363-457)||(21395308-21395401)
chr6 (362-454)||(3209350-3209442)
chr6 (318-478)||(8805523-8805687)
chr6 (368-445)||(17341669-17341746)
chr6 (378-454)||(13360387-13360463)
chr6 (378-454)||(34073362-34073438)
chr6 (320-411)||(1700363-1700454)
chr6 (377-479)||(5970122-5970218)
chr6 (358-449)||(6898276-6898367)
chr6 (383-454)||(10339146-10339217)
chr6 (363-461)||(7930266-7930364)
chr6 (358-446)||(4877918-4878007)
chr6 (362-427)||(7801155-7801220)
chr6 (378-459)||(30866159-30866240)
chr6 (358-463)||(33001284-33001388)
chr6 (363-451)||(17327655-17327743)
chr6 (378-478)||(18367781-18367880)
chr6 (378-454)||(19044432-19044508)
chr6 (363-411)||(31384931-31384979)
chr6 (358-449)||(31579222-31579311)
chr6 (379-454)||(5000642-5000717)
chr6 (318-447)||(7086770-7086905)
chr6 (364-447)||(15489733-15489816)
chr6 (378-453)||(1532207-1532284)
chr6 (318-368)||(17327589-17327639)
chr6 (378-440)||(26562671-26562733)
chr6 (358-427)||(32978894-32978964)
chr6 (359-408)||(6751878-6751927)
chr6 (378-427)||(8931617-8931666)
chr6 (392-461)||(10649289-10649358)
chr6 (318-367)||(12868615-12868664)
chr6 (358-447)||(23771554-23771642)
chr6 (370-426)||(1191707-1191763)
chr6 (378-454)||(7625090-7625166)
chr6 (358-454)||(7740610-7740705)
chr6 (378-478)||(10294051-10294151)
chr6 (378-442)||(20371125-20371189)
chr6 (358-402)||(26402675-26402719)
chr6 (318-362)||(28715371-28715415)
chr6 (319-359)||(32839571-32839611)
chr6 (318-353)||(4878027-4878062)
chr6 (319-362)||(7378055-7378098)
chr6 (378-421)||(7569183-7569226)
chr6 (319-354)||(7723199-7723234)
chr6 (380-411)||(34446576-34446607)
chr6 (319-362)||(34595210-34595253)
chr6 (358-424)||(7377977-7378043)
chr6 (318-368)||(8365447-8365497)
chr6 (322-368)||(8389411-8389457)
chr6 (319-369)||(19294694-19294744)
chr6 (319-361)||(21424744-21424786)
chr6 (358-411)||(403859-403912)
chr6 (321-362)||(5569825-5569866)
chr6 (319-368)||(7248439-7248488)
chr6 (319-368)||(7625186-7625235)
chr6 (319-368)||(9107299-9107348)
chr6 (378-411)||(9195769-9195802)
chr6 (320-368)||(9658949-9658998)
chr6 (318-367)||(10339053-10339102)
chr6 (319-368)||(16766778-16766827)
chr6 (380-449)||(17168480-17168549)
chr6 (320-353)||(17841530-17841563)
chr6 (363-408)||(19369831-19369876)
chr6 (320-361)||(31385007-31385048)
chr6 (361-422)||(32511664-32511725)
chr6 (378-454)||(2153902-2153978)
chr6 (377-441)||(2224207-2224271)
chr6 (363-419)||(7112781-7112837)
chr6 (363-419)||(8781308-8781364)
chr6 (363-411)||(9024176-9024224)
chr6 (392-440)||(10760870-10760918)
chr6 (378-410)||(11591885-11591917)
chr6 (358-394)||(16388212-16388248)
chr6 (378-442)||(16388248-16388311)
chr6 (391-439)||(19147431-19147479)
chr6 (319-367)||(32511606-32511654)
[»] chr4 (96 HSPs)
chr4 (358-479)||(23292981-23293102)
chr4 (318-442)||(30298926-30299049)
chr4 (318-442)||(30327794-30327917)
chr4 (378-478)||(36635268-36635368)
chr4 (359-454)||(21945471-21945566)
chr4 (319-478)||(10499227-10499383)
chr4 (321-447)||(22440559-22440684)
chr4 (319-422)||(37203264-37203371)
chr4 (358-478)||(12895269-12895389)
chr4 (371-479)||(19482611-19482719)
chr4 (378-454)||(24343475-24343551)
chr4 (358-449)||(49430998-49431090)
chr4 (358-449)||(12797333-12797423)
chr4 (318-478)||(20633429-20633591)
chr4 (363-449)||(3947766-3947852)
chr4 (363-460)||(28084483-28084581)
chr4 (317-385)||(30094066-30094134)
chr4 (358-454)||(35157980-35158076)
chr4 (318-436)||(11596296-11596425)
chr4 (369-476)||(14126117-14126224)
chr4 (364-450)||(847923-848009)
chr4 (371-449)||(40481610-40481687)
chr4 (363-448)||(16303266-16303351)
chr4 (358-446)||(2361970-2362058)
chr4 (378-454)||(5414187-5414263)
chr4 (383-447)||(7012041-7012105)
chr4 (320-411)||(17425348-17425437)
chr4 (358-422)||(28964243-28964307)
chr4 (380-435)||(20743295-20743350)
chr4 (363-454)||(27706177-27706268)
chr4 (358-449)||(34306799-34306889)
chr4 (361-424)||(38847010-38847073)
chr4 (358-424)||(8423713-8423779)
chr4 (321-410)||(16189721-16189813)
chr4 (319-361)||(35157925-35157967)
chr4 (318-368)||(35161106-35161156)
chr4 (358-427)||(54580018-54580087)
chr4 (363-439)||(4383351-4383426)
chr4 (371-447)||(11651142-11651218)
chr4 (319-367)||(12708213-12708261)
chr4 (382-429)||(4672104-4672151)
chr4 (387-454)||(20521873-20521940)
chr4 (358-421)||(29205445-29205508)
chr4 (363-449)||(35723384-35723470)
chr4 (363-422)||(51701258-51701317)
chr4 (319-353)||(18844423-18844457)
chr4 (381-459)||(28720840-28720916)
chr4 (378-424)||(32910549-32910595)
chr4 (358-427)||(42640521-42640593)
chr4 (378-439)||(903905-903966)
chr4 (381-442)||(30522933-30522994)
chr4 (378-447)||(30838185-30838254)
chr4 (363-454)||(30982878-30982966)
chr4 (378-427)||(40613445-40613494)
chr4 (319-367)||(715545-715593)
chr4 (319-367)||(752871-752919)
chr4 (318-358)||(5775303-5775343)
chr4 (319-367)||(8423658-8423706)
chr4 (378-442)||(13783261-13783325)
chr4 (378-454)||(16402226-16402302)
chr4 (318-362)||(40784029-40784073)
chr4 (318-362)||(53381529-53381573)
chr4 (371-461)||(752941-753031)
chr4 (318-353)||(3064867-3064902)
chr4 (358-437)||(16073380-16073458)
chr4 (364-423)||(24613702-24613761)
chr4 (378-457)||(26504314-26504393)
chr4 (380-411)||(31243565-31243596)
chr4 (319-362)||(36635406-36635449)
chr4 (319-353)||(3144587-3144621)
chr4 (320-362)||(4383443-4383484)
chr4 (358-408)||(13307891-13307941)
chr4 (351-408)||(13484037-13484095)
chr4 (378-436)||(15029751-15029809)
chr4 (318-368)||(18513174-18513224)
chr4 (319-353)||(23292926-23292960)
chr4 (381-447)||(34515892-34515958)
chr4 (358-424)||(35161034-35161100)
chr4 (358-456)||(40179631-40179729)
chr4 (378-427)||(1747207-1747256)
chr4 (342-402)||(6879443-6879504)
chr4 (378-442)||(16184799-16184861)
chr4 (319-368)||(16886677-16886726)
chr4 (319-368)||(24343583-24343632)
chr4 (378-411)||(26276024-26276057)
chr4 (378-411)||(36386226-36386259)
chr4 (320-368)||(3947702-3947750)
chr4 (358-422)||(4157150-4157213)
chr4 (377-480)||(12708088-12708192)
chr4 (349-405)||(13117446-13117502)
chr4 (322-362)||(28084600-28084640)
chr4 (319-367)||(29205539-29205587)
chr4 (320-368)||(30982808-30982856)
chr4 (379-423)||(38148741-38148785)
chr4 (378-454)||(40742559-40742635)
chr4 (378-422)||(56257933-56257977)
[»] scaffold0223 (1 HSPs)
scaffold0223 (318-460)||(20134-20280)
[»] scaffold0053 (1 HSPs)
scaffold0053 (358-479)||(8741-8862)
[»] chr7 (90 HSPs)
chr7 (363-461)||(27945002-27945100)
chr7 (319-427)||(28155565-28155673)
chr7 (363-466)||(24339598-24339701)
chr7 (370-454)||(13770659-13770743)
chr7 (319-446)||(30813788-30813916)
chr7 (358-454)||(25481870-25481966)
chr7 (378-454)||(43249961-43250037)
chr7 (363-478)||(5409836-5409951)
chr7 (370-449)||(24105651-24105730)
chr7 (358-461)||(26733265-26733368)
chr7 (358-476)||(11061071-11061189)
chr7 (326-442)||(18215144-18215265)
chr7 (358-439)||(23191879-23191960)
chr7 (363-454)||(43027469-43027560)
chr7 (378-457)||(18233613-18233694)
chr7 (318-427)||(35861959-35862071)
chr7 (386-451)||(11722121-11722186)
chr7 (379-479)||(30730980-30731080)
chr7 (358-479)||(18213028-18213150)
chr7 (358-416)||(21880158-21880216)
chr7 (379-437)||(32308105-32308163)
chr7 (319-368)||(598278-598327)
chr7 (380-457)||(4017811-4017888)
chr7 (320-439)||(9482917-9483040)
chr7 (378-449)||(22868015-22868086)
chr7 (319-457)||(29763129-29763268)
chr7 (378-441)||(29787384-29787447)
chr7 (358-461)||(33994173-33994276)
chr7 (378-480)||(5235928-5236030)
chr7 (378-436)||(5835233-5835291)
chr7 (363-478)||(9778452-9778559)
chr7 (379-441)||(21828421-21828483)
chr7 (358-461)||(21864767-21864872)
chr7 (378-479)||(1433397-1433498)
chr7 (378-447)||(19206025-19206094)
chr7 (319-422)||(19213803-19213912)
chr7 (358-435)||(20549778-20549855)
chr7 (384-460)||(2425754-2425830)
chr7 (318-362)||(5409770-5409814)
chr7 (358-442)||(15680789-15680873)
chr7 (319-367)||(21880223-21880271)
chr7 (378-454)||(26329397-26329473)
chr7 (319-374)||(6490780-6490835)
chr7 (358-441)||(7197292-7197375)
chr7 (378-461)||(7328706-7328789)
chr7 (363-422)||(19992001-19992060)
chr7 (380-423)||(23930218-23930261)
chr7 (319-424)||(3991322-3991432)
chr7 (358-424)||(8234144-8234210)
chr7 (382-448)||(8842354-8842420)
chr7 (318-368)||(9778575-9778625)
chr7 (319-353)||(29812598-29812632)
chr7 (363-436)||(9408334-9408407)
chr7 (363-444)||(10042915-10042996)
chr7 (378-443)||(22484004-22484069)
chr7 (320-369)||(32287404-32287453)
chr7 (319-368)||(43027404-43027453)
chr7 (380-424)||(7133295-7133339)
chr7 (319-411)||(10230024-10230121)
chr7 (378-454)||(17851399-17851475)
chr7 (378-446)||(22602725-22602793)
chr7 (370-418)||(26033468-26033516)
chr7 (357-457)||(12278794-12278899)
chr7 (372-454)||(13557750-13557835)
chr7 (378-449)||(15902795-15902866)
chr7 (319-362)||(24339729-24339772)
chr7 (387-454)||(36297369-36297435)
chr7 (378-440)||(1401007-1401069)
chr7 (378-416)||(2424620-2424658)
chr7 (363-425)||(5548673-5548735)
chr7 (362-408)||(5937420-5937466)
chr7 (378-436)||(6630927-6630985)
chr7 (363-434)||(11272586-11272659)
chr7 (378-447)||(12289088-12289158)
chr7 (324-362)||(13770772-13770810)
chr7 (378-476)||(21140997-21141095)
chr7 (378-448)||(49107795-49107864)
chr7 (319-368)||(1433529-1433578)
chr7 (358-411)||(4909162-4909215)
chr7 (378-411)||(17307904-17307937)
chr7 (363-444)||(18013074-18013155)
chr7 (320-357)||(18035806-18035843)
chr7 (358-403)||(25956464-25956509)
chr7 (365-414)||(37775990-37776039)
chr7 (358-454)||(598176-598272)
chr7 (322-362)||(8842282-8842322)
chr7 (363-411)||(12843175-12843223)
chr7 (383-427)||(24289815-24289859)
chr7 (363-427)||(25822650-25822714)
chr7 (323-367)||(40287306-40287350)
[»] chr3 (106 HSPs)
chr3 (358-460)||(55401037-55401139)
chr3 (359-460)||(8587017-8587118)
chr3 (345-444)||(10268468-10268567)
chr3 (358-454)||(24205037-24205132)
chr3 (363-454)||(28917969-28918060)
chr3 (358-479)||(7171445-7171565)
chr3 (358-454)||(8383225-8383321)
chr3 (363-478)||(15796294-15796409)
chr3 (358-477)||(16000011-16000130)
chr3 (358-479)||(35994734-35994853)
chr3 (358-449)||(26492200-26492291)
chr3 (318-454)||(10335244-10335377)
chr3 (362-479)||(21479067-21479178)
chr3 (370-454)||(4990974-4991058)
chr3 (358-442)||(10954932-10955016)
chr3 (319-447)||(11610496-11610628)
chr3 (363-454)||(14829658-14829748)
chr3 (358-457)||(25093467-25093566)
chr3 (358-436)||(20503451-20503529)
chr3 (381-454)||(3164043-3164116)
chr3 (371-435)||(4987299-4987363)
chr3 (378-458)||(25064873-25064953)
chr3 (370-453)||(3610602-3610685)
chr3 (370-449)||(26508083-26508162)
chr3 (363-454)||(41961650-41961741)
chr3 (379-449)||(14979154-14979224)
chr3 (318-436)||(40052318-40052432)
chr3 (363-479)||(750618-750735)
chr3 (379-448)||(9800014-9800083)
chr3 (381-454)||(16789668-16789741)
chr3 (363-427)||(14209108-14209172)
chr3 (363-447)||(14216867-14216951)
chr3 (363-447)||(14222996-14223080)
chr3 (378-478)||(34307795-34307895)
chr3 (358-422)||(51206348-51206412)
chr3 (382-453)||(25652050-25652121)
chr3 (318-368)||(41961578-41961628)
chr3 (329-457)||(12674466-12674595)
chr3 (363-478)||(14747511-14747621)
chr3 (363-440)||(14832081-14832158)
chr3 (319-368)||(34185052-34185101)
chr3 (358-439)||(49505149-49505230)
chr3 (381-449)||(2620071-2620139)
chr3 (378-450)||(5441046-5441118)
chr3 (378-478)||(11665888-11665988)
chr3 (358-437)||(25775493-25775573)
chr3 (378-442)||(25948902-25948966)
chr3 (363-427)||(34910312-34910376)
chr3 (318-362)||(49651715-49651759)
chr3 (363-422)||(1509539-1509598)
chr3 (382-461)||(4466619-4466698)
chr3 (320-367)||(8789489-8789536)
chr3 (382-449)||(14223872-14223939)
chr3 (319-362)||(20503541-20503584)
chr3 (379-442)||(21720744-21720807)
chr3 (358-424)||(7928448-7928514)
chr3 (380-454)||(14618749-14618823)
chr3 (318-368)||(27903708-27903758)
chr3 (358-438)||(32400703-32400780)
chr3 (360-442)||(33359741-33359823)
chr3 (370-448)||(35312028-35312106)
chr3 (378-443)||(11493376-11493441)
chr3 (331-404)||(13414487-13414560)
chr3 (322-410)||(21367289-21367382)
chr3 (319-368)||(27505321-27505370)
chr3 (378-459)||(32429395-32429476)
chr3 (363-436)||(34185123-34185196)
chr3 (318-367)||(40993274-40993323)
chr3 (359-422)||(8593136-8593200)
chr3 (318-362)||(14979225-14979269)
chr3 (370-422)||(21256993-21257045)
chr3 (365-453)||(24633736-24633823)
chr3 (363-427)||(28812510-28812574)
chr3 (378-454)||(32804555-32804630)
chr3 (399-442)||(3865592-3865635)
chr3 (321-368)||(4987222-4987269)
chr3 (319-407)||(12083918-12084002)
chr3 (378-461)||(16788973-16789056)
chr3 (380-411)||(20691330-20691361)
chr3 (380-411)||(21149078-21149109)
chr3 (380-427)||(25074784-25074831)
chr3 (380-423)||(34189426-34189469)
chr3 (319-353)||(4990912-4990946)
chr3 (378-440)||(5407262-5407324)
chr3 (358-424)||(8789545-8789611)
chr3 (319-353)||(8842414-8842448)
chr3 (404-442)||(10318075-10318113)
chr3 (378-416)||(11251984-11252022)
chr3 (319-357)||(11252057-11252095)
chr3 (378-424)||(11313815-11313861)
chr3 (320-362)||(14216979-14217021)
chr3 (320-362)||(14223108-14223150)
chr3 (378-448)||(14840306-14840376)
chr3 (378-424)||(16192765-16192811)
chr3 (363-425)||(27505243-27505305)
chr3 (320-362)||(34910393-34910435)
chr3 (319-353)||(55401160-55401194)
chr3 (324-369)||(1509636-1509681)
chr3 (378-427)||(8039850-8039899)
chr3 (378-427)||(12704002-12704051)
chr3 (319-348)||(17276817-17276846)
chr3 (321-362)||(29508526-29508567)
chr3 (378-422)||(9624641-9624685)
chr3 (378-422)||(10690277-10690321)
chr3 (320-368)||(15999951-15999999)
chr3 (378-422)||(27277853-27277897)
[»] scaffold0027 (1 HSPs)
scaffold0027 (319-479)||(46625-46776)
[»] scaffold0652 (1 HSPs)
scaffold0652 (358-476)||(457-575)
[»] chr8 (91 HSPs)
chr8 (318-451)||(27213518-27213645)
chr8 (363-454)||(22651944-22652035)
chr8 (365-454)||(29510306-29510395)
chr8 (378-478)||(24362217-24362317)
chr8 (358-449)||(20873042-20873133)
chr8 (319-449)||(24669406-24669536)
chr8 (363-478)||(2572056-2572171)
chr8 (364-466)||(4673426-4673528)
chr8 (319-454)||(13436910-13437055)
chr8 (364-454)||(22197743-22197833)
chr8 (378-459)||(25192362-25192443)
chr8 (358-442)||(36450749-36450833)
chr8 (358-449)||(8343289-8343380)
chr8 (358-461)||(31556958-31557060)
chr8 (360-454)||(926785-926879)
chr8 (359-451)||(18170478-18170570)
chr8 (359-451)||(18634046-18634138)
chr8 (319-422)||(25566841-25566949)
chr8 (378-454)||(44067484-44067560)
chr8 (360-435)||(22595981-22596056)
chr8 (363-438)||(30271291-30271366)
chr8 (378-477)||(36934615-36934714)
chr8 (358-478)||(24413554-24413675)
chr8 (319-411)||(4948663-4948754)
chr8 (363-439)||(15816129-15816205)
chr8 (358-434)||(24613509-24613584)
chr8 (319-362)||(15816058-15816101)
chr8 (358-416)||(3025557-3025615)
chr8 (378-460)||(11927101-11927183)
chr8 (358-436)||(13844591-13844669)
chr8 (364-449)||(4298887-4298972)
chr8 (358-439)||(5813575-5813656)
chr8 (316-424)||(8342970-8343089)
chr8 (358-467)||(26434135-26434244)
chr8 (378-439)||(34897068-34897129)
chr8 (358-411)||(40332202-40332255)
chr8 (378-430)||(7658455-7658507)
chr8 (378-446)||(11803235-11803303)
chr8 (361-437)||(30077385-30077461)
chr8 (378-454)||(37283825-37283901)
chr8 (371-447)||(41838131-41838207)
chr8 (378-461)||(13203602-13203685)
chr8 (320-367)||(24205749-24205796)
chr8 (359-442)||(31109514-31109597)
chr8 (358-449)||(42874495-42874586)
chr8 (378-424)||(4611532-4611578)
chr8 (380-453)||(24857978-24858054)
chr8 (318-368)||(29510232-29510282)
chr8 (320-427)||(31236532-31236641)
chr8 (319-422)||(31514872-31514973)
chr8 (319-353)||(39820513-39820547)
chr8 (378-436)||(39954294-39954352)
chr8 (370-447)||(18407695-18407771)
chr8 (319-368)||(22652057-22652106)
chr8 (380-457)||(39820394-39820471)
chr8 (354-414)||(1433353-1433413)
chr8 (318-362)||(4673353-4673397)
chr8 (316-368)||(8343397-8343449)
chr8 (359-479)||(27101458-27101577)
chr8 (361-436)||(4786336-4786411)
chr8 (381-448)||(14692434-14692500)
chr8 (319-362)||(17751732-17751775)
chr8 (319-362)||(17760719-17760762)
chr8 (358-439)||(22204622-22204705)
chr8 (398-461)||(24196632-24196695)
chr8 (384-455)||(28883899-28883970)
chr8 (364-423)||(29447111-29447170)
chr8 (378-445)||(29776013-29776080)
chr8 (370-425)||(41831947-41832002)
chr8 (378-460)||(11944627-11944709)
chr8 (318-368)||(15131733-15131783)
chr8 (318-368)||(22197670-22197720)
chr8 (319-353)||(24413499-24413533)
chr8 (319-368)||(3951476-3951525)
chr8 (378-411)||(14134710-14134743)
chr8 (322-355)||(24727684-24727717)
chr8 (378-411)||(34201061-34201094)
chr8 (319-367)||(6065586-6065634)
chr8 (371-439)||(7442828-7442896)
chr8 (319-367)||(11803341-11803389)
chr8 (380-416)||(12559123-12559159)
chr8 (378-422)||(14731712-14731756)
chr8 (321-361)||(16987990-16988030)
chr8 (398-446)||(17751651-17751699)
chr8 (398-446)||(17760638-17760686)
chr8 (364-436)||(20679396-20679468)
chr8 (363-449)||(27067300-27067387)
chr8 (381-461)||(28642369-28642449)
chr8 (381-449)||(28745471-28745539)
chr8 (320-368)||(29447040-29447088)
chr8 (358-454)||(33405379-33405475)
[»] chr2 (88 HSPs)
chr2 (318-460)||(19536360-19536495)
chr2 (318-476)||(21616708-21616865)
chr2 (318-461)||(20539631-20539772)
chr2 (358-457)||(15972838-15972937)
chr2 (378-459)||(21782833-21782914)
chr2 (321-442)||(42832234-42832355)
chr2 (358-461)||(21624227-21624331)
chr2 (358-449)||(30404845-30404936)
chr2 (364-454)||(18276489-18276579)
chr2 (360-442)||(37558957-37559039)
chr2 (358-454)||(2438714-2438808)
chr2 (369-442)||(21374705-21374778)
chr2 (358-449)||(18841008-18841099)
chr2 (378-461)||(23717988-23718070)
chr2 (378-461)||(24105660-24105742)
chr2 (380-454)||(10535776-10535850)
chr2 (359-449)||(21091696-21091786)
chr2 (363-452)||(15657834-15657923)
chr2 (369-442)||(39323244-39323317)
chr2 (358-454)||(18421931-18422027)
chr2 (363-447)||(30335392-30335476)
chr2 (378-478)||(31283992-31284092)
chr2 (370-444)||(6940233-6940307)
chr2 (319-454)||(31018558-31018689)
chr2 (358-436)||(38117154-38117232)
chr2 (358-447)||(20242722-20242811)
chr2 (370-443)||(30717537-30717610)
chr2 (378-479)||(34784997-34785098)
chr2 (358-454)||(43586000-43586096)
chr2 (364-447)||(11223864-11223947)
chr2 (320-411)||(23921264-23921355)
chr2 (378-441)||(24894370-24894433)
chr2 (363-433)||(12668423-12668493)
chr2 (377-447)||(12940949-12941019)
chr2 (380-454)||(23354669-23354743)
chr2 (363-449)||(36756344-36756430)
chr2 (318-368)||(37419824-37419874)
chr2 (378-447)||(27286307-27286376)
chr2 (378-478)||(28677852-28677953)
chr2 (364-447)||(14996224-14996308)
chr2 (320-443)||(20473301-20473427)
chr2 (378-454)||(28412318-28412394)
chr2 (380-454)||(896181-896253)
chr2 (324-447)||(23058389-23058527)
chr2 (379-437)||(27460011-27460070)
chr2 (346-408)||(8300202-8300264)
chr2 (378-436)||(15909647-15909705)
chr2 (319-368)||(26769592-26769641)
chr2 (358-449)||(28596445-28596533)
chr2 (357-406)||(33884067-33884116)
chr2 (319-368)||(38117099-38117148)
chr2 (319-367)||(11223793-11223841)
chr2 (378-442)||(16069269-16069333)
chr2 (318-362)||(29176367-29176411)
chr2 (370-442)||(34221504-34221576)
chr2 (378-442)||(37411259-37411323)
chr2 (321-368)||(19942335-19942382)
chr2 (365-436)||(31808063-31808134)
chr2 (363-438)||(37419727-37419802)
chr2 (319-362)||(37559053-37559096)
chr2 (358-425)||(5040729-5040798)
chr2 (380-454)||(11308021-11308094)
chr2 (319-353)||(18420363-18420397)
chr2 (384-454)||(23355016-23355086)
chr2 (318-368)||(32200609-32200659)
chr2 (318-368)||(34006929-34006979)
chr2 (378-477)||(44860273-44860364)
chr2 (358-411)||(5367203-5367256)
chr2 (319-368)||(10535685-10535734)
chr2 (331-368)||(14996171-14996208)
chr2 (365-454)||(18420436-18420525)
chr2 (358-411)||(18570983-18571036)
chr2 (378-427)||(19573973-19574022)
chr2 (319-368)||(35056949-35056998)
chr2 (378-447)||(36409642-36409711)
chr2 (319-368)||(42511322-42511371)
chr2 (363-423)||(974746-974806)
chr2 (321-353)||(2438661-2438693)
chr2 (378-454)||(4332894-4332970)
chr2 (320-368)||(17651633-17651681)
chr2 (358-449)||(18589171-18589260)
chr2 (431-479)||(18631467-18631515)
chr2 (380-456)||(30298464-30298540)
chr2 (363-407)||(32749825-32749869)
chr2 (363-427)||(33153419-33153483)
chr2 (378-446)||(35449489-35449557)
chr2 (380-436)||(37986765-37986821)
chr2 (379-411)||(40681993-40682025)
[»] chr1 (122 HSPs)
chr1 (363-479)||(6612171-6612287)
chr1 (318-436)||(22881566-22881689)
chr1 (318-478)||(29144319-29144472)
chr1 (319-449)||(48450550-48450673)
chr1 (378-480)||(398780-398882)
chr1 (324-477)||(3490352-3490498)
chr1 (358-479)||(41877465-41877586)
chr1 (319-436)||(35702542-35702661)
chr1 (370-457)||(31015008-31015095)
chr1 (363-477)||(1486709-1486823)
chr1 (359-461)||(5927336-5927438)
chr1 (320-453)||(9103609-9103741)
chr1 (321-421)||(25452108-25452206)
chr1 (359-483)||(42359445-42359569)
chr1 (358-442)||(46348378-46348462)
chr1 (363-450)||(5376500-5376587)
chr1 (318-427)||(13436453-13436563)
chr1 (323-466)||(48040418-48040565)
chr1 (382-454)||(2896140-2896212)
chr1 (358-478)||(38078656-38078771)
chr1 (378-461)||(10572604-10572687)
chr1 (378-461)||(19562636-19562718)
chr1 (358-440)||(22515882-22515964)
chr1 (363-477)||(31694710-31694824)
chr1 (378-451)||(1262855-1262928)
chr1 (380-457)||(20157367-20157444)
chr1 (318-402)||(46940747-46940832)
chr1 (378-478)||(10577750-10577850)
chr1 (324-440)||(12443422-12443537)
chr1 (358-449)||(19058851-19058943)
chr1 (363-454)||(40917719-40917808)
chr1 (363-479)||(47989441-47989556)
chr1 (378-449)||(6427323-6427394)
chr1 (363-454)||(7918211-7918302)
chr1 (325-454)||(13011172-13011307)
chr1 (370-449)||(14359529-14359607)
chr1 (365-448)||(21378552-21378635)
chr1 (358-437)||(31672890-31672969)
chr1 (378-453)||(34298405-34298480)
chr1 (318-411)||(2288124-2288215)
chr1 (363-454)||(5944249-5944342)
chr1 (378-436)||(36878447-36878505)
chr1 (485-539)||(39832752-39832806)
chr1 (371-432)||(113289-113350)
chr1 (358-447)||(9709795-9709884)
chr1 (318-438)||(24334663-24334781)
chr1 (378-454)||(19324530-19324606)
chr1 (358-438)||(37598816-37598895)
chr1 (378-449)||(5898281-5898352)
chr1 (367-449)||(37055860-37055942)
chr1 (358-439)||(1815240-1815321)
chr1 (381-454)||(15641048-15641121)
chr1 (358-411)||(18337340-18337393)
chr1 (377-442)||(18556470-18556535)
chr1 (363-436)||(24577186-24577259)
chr1 (317-362)||(31694637-31694682)
chr1 (378-479)||(38503263-38503364)
chr1 (363-439)||(1704992-1705068)
chr1 (378-446)||(1864895-1864962)
chr1 (380-436)||(17831548-17831604)
chr1 (358-425)||(51410021-51410089)
chr1 (387-478)||(609482-609573)
chr1 (379-454)||(15323131-15323206)
chr1 (370-478)||(18190115-18190215)
chr1 (370-478)||(18471242-18471352)
chr1 (319-362)||(18556385-18556428)
chr1 (382-453)||(21366039-21366110)
chr1 (379-446)||(23636065-23636132)
chr1 (318-368)||(9828125-9828175)
chr1 (358-424)||(40258928-40258994)
chr1 (318-368)||(40917830-40917880)
chr1 (377-454)||(16297297-16297374)
chr1 (364-449)||(28273089-28273174)
chr1 (319-368)||(32461393-32461442)
chr1 (321-362)||(42359391-42359432)
chr1 (358-427)||(43492489-43492558)
chr1 (378-442)||(6415016-6415080)
chr1 (378-446)||(16927200-16927268)
chr1 (381-453)||(17754280-17754352)
chr1 (318-362)||(21365991-21366035)
chr1 (318-362)||(22947806-22947850)
chr1 (363-411)||(25361897-25361945)
chr1 (380-424)||(26238129-26238173)
chr1 (377-449)||(27471580-27471652)
chr1 (317-353)||(37598916-37598952)
chr1 (358-422)||(40181871-40181935)
chr1 (318-374)||(42325623-42325679)
chr1 (319-367)||(47989579-47989627)
chr1 (364-411)||(3921678-3921725)
chr1 (363-434)||(6332659-6332729)
chr1 (418-461)||(9630635-9630678)
chr1 (321-368)||(16297223-16297270)
chr1 (321-368)||(17778623-17778670)
chr1 (365-408)||(18946036-18946079)
chr1 (321-368)||(23705422-23705469)
chr1 (378-425)||(25098570-25098617)
chr1 (319-362)||(27965940-27965983)
chr1 (363-442)||(34712383-34712462)
chr1 (358-461)||(39130762-39130865)
chr1 (318-369)||(48632322-48632373)
chr1 (318-368)||(6427545-6427595)
chr1 (318-368)||(15765828-15765878)
chr1 (319-353)||(22515827-22515861)
chr1 (378-424)||(23738676-23738722)
chr1 (378-424)||(40747788-40747834)
chr1 (381-411)||(42325571-42325601)
chr1 (321-362)||(1486646-1486687)
chr1 (383-436)||(10474997-10475050)
chr1 (384-461)||(16812504-16812581)
chr1 (378-451)||(22794093-22794166)
chr1 (321-354)||(23622391-23622424)
chr1 (413-478)||(41597520-41597585)
chr1 (378-411)||(44482241-44482274)
chr1 (319-367)||(5944365-5944413)
chr1 (318-362)||(7918153-7918197)
chr1 (379-427)||(9828039-9828087)
chr1 (319-359)||(16812635-16812675)
chr1 (319-475)||(23531734-23531890)
chr1 (378-442)||(32724113-32724177)
chr1 (319-367)||(32899962-32900010)
chr1 (317-353)||(34741931-34741967)
chr1 (358-442)||(52903229-52903313)
[»] scaffold0018 (2 HSPs)
scaffold0018 (364-454)||(178819-178910)
scaffold0018 (370-447)||(192256-192333)
[»] scaffold0003 (2 HSPs)
scaffold0003 (363-454)||(241562-241653)
scaffold0003 (319-368)||(241675-241724)
[»] scaffold0021 (1 HSPs)
scaffold0021 (370-478)||(130426-130534)
[»] scaffold0007 (1 HSPs)
scaffold0007 (378-454)||(225283-225359)
[»] scaffold0306 (1 HSPs)
scaffold0306 (362-461)||(13361-13460)
[»] scaffold0152 (1 HSPs)
scaffold0152 (362-461)||(21867-21966)
[»] scaffold0004 (3 HSPs)
scaffold0004 (367-439)||(92790-92862)
scaffold0004 (320-367)||(92893-92940)
scaffold0004 (320-435)||(123612-123731)
[»] scaffold0103 (1 HSPs)
scaffold0103 (371-442)||(51791-51862)
[»] scaffold0049 (2 HSPs)
scaffold0049 (342-451)||(63743-63853)
scaffold0049 (363-411)||(56933-56981)
[»] scaffold0136 (2 HSPs)
scaffold0136 (363-447)||(3849-3933)
scaffold0136 (317-353)||(3776-3812)
[»] scaffold0722 (1 HSPs)
scaffold0722 (358-439)||(7027-7108)
[»] scaffold0008 (1 HSPs)
scaffold0008 (363-467)||(263372-263476)
[»] scaffold0246 (1 HSPs)
scaffold0246 (371-449)||(19549-19626)
[»] scaffold0019 (2 HSPs)
scaffold0019 (363-436)||(71709-71784)
scaffold0019 (318-368)||(71806-71856)
[»] scaffold0020 (1 HSPs)
scaffold0020 (319-461)||(135263-135410)
[»] scaffold0171 (2 HSPs)
scaffold0171 (363-449)||(23393-23479)
scaffold0171 (363-449)||(23483-23570)
[»] scaffold0066 (1 HSPs)
scaffold0066 (377-427)||(33377-33427)
[»] scaffold0116 (1 HSPs)
scaffold0116 (378-479)||(9841-9942)
[»] scaffold0050 (1 HSPs)
scaffold0050 (358-423)||(70277-70342)
[»] scaffold0361 (1 HSPs)
scaffold0361 (372-427)||(14525-14580)
[»] scaffold0122 (2 HSPs)
scaffold0122 (363-454)||(8634-8725)
scaffold0122 (358-427)||(8005-8073)
[»] scaffold0086 (1 HSPs)
scaffold0086 (319-362)||(3015-3058)
[»] scaffold0044 (1 HSPs)
scaffold0044 (378-453)||(53153-53224)
[»] scaffold0598 (1 HSPs)
scaffold0598 (381-442)||(8071-8132)
[»] scaffold0475 (1 HSPs)
scaffold0475 (318-363)||(3383-3428)
[»] scaffold1528 (1 HSPs)
scaffold1528 (381-453)||(1004-1076)
[»] scaffold0793 (2 HSPs)
scaffold0793 (319-367)||(4821-4869)
scaffold0793 (371-461)||(4891-4981)
[»] scaffold0168 (3 HSPs)
scaffold0168 (378-454)||(21011-21087)
scaffold0168 (318-353)||(21115-21150)
scaffold0168 (318-353)||(21373-21408)
[»] scaffold0011 (1 HSPs)
scaffold0011 (364-427)||(17750-17813)
[»] scaffold0083 (1 HSPs)
scaffold0083 (358-396)||(45525-45563)
[»] scaffold0022 (1 HSPs)
scaffold0022 (378-448)||(90817-90887)
[»] scaffold0450 (1 HSPs)
scaffold0450 (319-368)||(8564-8613)
[»] scaffold0123 (1 HSPs)
scaffold0123 (378-410)||(44540-44572)
[»] scaffold0025 (1 HSPs)
scaffold0025 (363-438)||(23753-23829)


Alignment Details
Target: chr5 (Bit Score: 286; Significance: 1e-160; HSPs: 93)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 175 - 539
Target Start/End: Original strand, 6326109 - 6326480
Alignment:
Q  175 ttgagaagctcgcttgaacttctttggttgaaggtaccgagtattcttaggacacaaacaatactttgtatcttcaggtgtcggtgctggaaagatgcaa 274  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6326109 ttgagaagctcacttgaacttctttggttgaaggtaccgagtattcttaggacacaaacaatactttgtatcttcaggtgtcggtgctggaaagatgcaa 6326208  T
Q  275 tggtatgcatttcaccaagaacctgcgggaggtgtttgatacccctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacac 374  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  6326209 tggtatgcatttcaccaagaacctgcaggaggtgtttgatacccctatgaagcacggacacttctcgaattaggcgtgttccggtgtccgacgctgacac 6326308  T
Q  375 tcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttc 474  Q
    | |||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||||||||||||||||| || || |||||||| |||||||    
T  6326309 ttgtaattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtccttatccatgcttc 6326408  T
Q  475 ataggatacc-------gtatgtgctcctaaactaaatgtcttctaagtgtgtaagatctgccagaggatac 539  Q
    ||||||||||       |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6326409 ataggatacccccaatggtatatgctcctaaactaaatgtcttctaagtgtgtgagatctgccagaggatac 6326480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 125 - 319
Target Start/End: Original strand, 6316795 - 6316988
Alignment:
Q  125 tttaatccctatttaactatacttgccggccatcattttatcatgtcatgttgagaagctcgcttgaacttctttggttgaaggtaccgagtattcttag 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  6316795 tttaatccctatttaactatacttgccggccatcattttatcatgtcatgttgagaagctcacttgaacttctttggttgaaggtaccgggtattcttag 6316894  T
Q  225 gacacaaacaatactttgtatcttcaggtgtcggtgctggaaagatgcaatggtatgcatttcaccaagaacctgcgggaggtgtttgatacccc 319  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  6316895 gacacaaacaatactttgtatcttcagacgtcggtgctggaaagatgcaatggtatgcatttcaccaagaacctgcaggaggtg-ttgatacccc 6316988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 318 - 454
Target Start/End: Complemental strand, 6247730 - 6247590
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccg----gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattact 413  Q
    |||||||||||| |||||||||||||||||| |||| |||    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| |    
T  6247730 cctatgaagcacagacacttctcggattaggtgtgtcccgtgccgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 6247631  T
Q  414 agctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    || ||||||||||| ||||||| ||| ||||||||||||||    
T  6247630 agatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtc 6247590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 6326029 - 6326110
Alignment:
Q  56 catgtcctttgtttagtttttcagacacccaccagattatatgtccaacctgttgataaaaatacaaaatttaatccctatt 137  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6326029 catgtcctttgtttagttttgcagacacccaccagattatatctccaacctgttgataaaaatacaaaatttaatccctatt 6326110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 358 - 454
Target Start/End: Original strand, 21191051 - 21191147
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  21191051 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtc 21191147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 363 - 481
Target Start/End: Complemental strand, 21522809 - 21522691
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 462  Q
    |||||| |||| | |||||||||||||||||||| ||||| | |||||| ||||||||||||||| |||||||||||||||||||||||| | || |||     
T  21522809 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccg 21522710  T
Q  463 tatctatgcttcataggat 481  Q
    ||||  |||||||||||||    
T  21522709 tatccgtgcttcataggat 21522691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 363 - 481
Target Start/End: Complemental strand, 21533375 - 21533257
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 462  Q
    |||||| |||| | |||||||||||||||||||| ||||| | |||||| ||||||||||||||| |||||||||||||||||||||||| | || |||     
T  21533375 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccg 21533276  T
Q  463 tatctatgcttcataggat 481  Q
    ||||  |||||||||||||    
T  21533275 tatccgtgcttcataggat 21533257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 171 - 288
Target Start/End: Original strand, 6306905 - 6307022
Alignment:
Q  171 catgttgagaagctcgcttgaacttctttggttgaaggtaccgagtattcttaggacacaaacaatactttgtatcttcaggtgtcggtgctggaaagat 270  Q
    |||||||| ||||||  ||||||||| ||||| ||||||||| || ||||||||||| ||||||||||| ||||||||| | ||  |||| |||||||||    
T  6306905 catgttgaaaagctcatttgaacttcattggtggaaggtaccaaggattcttaggactcaaacaatactctgtatcttccgatgatggtgttggaaagat 6307004  T
Q  271 gcaatggtatgcatttca 288  Q
    ||||||||||||||||||    
T  6307005 gcaatggtatgcatttca 6307022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 363 - 454
Target Start/End: Complemental strand, 19579760 - 19579669
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| |||||| |||||| |||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||||||    
T  19579760 cgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgttgtatccggtgtc 19579669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 24906252 - 24906390
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc-----cgacactgacactcgtaattacactgaattatgtcattttctcaaattact 413  Q
    |||||||||||||||||| |||| ||||||||||| |   ||||     ||| || |||||| |||||||||||||||||||||||||| |||||||| |    
T  24906252 ctatgaagcacggacactcctcgaattaggcgtgtcctattgtcatgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattatt 24906351  T
Q  414 agctgtgtcggcgtatcagtgtccgtgtcgtgtccggtg 452  Q
    | |||||| ||||| ||||||| ||||||||||||||||    
T  24906352 atctgtgttggcgtgtcagtgttcgtgtcgtgtccggtg 24906390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 378 - 461
Target Start/End: Complemental strand, 22013458 - 22013375
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    |||||||||| |||||||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  22013458 taattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatcc 22013375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 328 - 479
Target Start/End: Original strand, 17176991 - 17177139
Alignment:
Q  328 acggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    ||||||||| ||  |||||||||||||   |||||  |||| |||||| ||||||||| |||||| | | ||||| |||||||| ||||||||| |||||    
T  17176991 acggacactacttagattaggcgtgtt---gtgtctaacaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgt 17177087  T
Q  428 atcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatagg 479  Q
    ||||||||||| ||||| || ||||||||| ||| ||||  |||||||||||    
T  17177088 atcagtgtccgagtcgtatctggtgtctgtgtccgtatccgtgcttcatagg 17177139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 362 - 479
Target Start/End: Complemental strand, 15382539 - 15382420
Alignment:
Q  362 ccgacactgacactcgtaattacactgaattatgtcattttct--caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtat 459  Q
    ||||||| |||||| ||||||| |||||||||| | ||||| |  ||||||| ||||||||||||||| ||| |||||||||||||||||||||| || |    
T  15382539 ccgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgt 15382440  T
Q  460 ccttatctatgcttcatagg 479  Q
    || ||||  |||||||||||    
T  15382439 ccgtatccgtgcttcatagg 15382420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 358 - 442
Target Start/End: Original strand, 21576740 - 21576824
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||  |||||| |||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  21576740 gtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgttcgtgtc 21576824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 363 - 439
Target Start/End: Complemental strand, 39698600 - 39698524
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 439  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||| |||| |||||||||||    
T  39698600 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgt 39698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 454
Target Start/End: Original strand, 13287399 - 13287490
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| |||||| ||| |||||||||||||||| ||||| |||||||| || |||||||| ||| | ||||||||||||||||||||||||    
T  13287399 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtc 13287490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 364 - 479
Target Start/End: Original strand, 36642763 - 36642877
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcctt 463  Q
    ||||| ||||||  || ||||||| || ||||||| ||| |||||||| || |||||||||||| ||||||||||||||||||||||||||| | ||| |    
T  36642763 gacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtct-tgtccgt 36642861  T
Q  464 atctatgcttcatagg 479  Q
    ||| ||||||||||||    
T  36642862 atccatgcttcatagg 36642877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 358 - 479
Target Start/End: Complemental strand, 6770605 - 6770486
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    |||||||||||||||||   ||| ||||||||||||||| ||||||| |||||| ||| |||||| | || |||||||||||||| ||| ||||||| ||    
T  6770605 gtgtccgacactgacaca--taagtacactgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccgtgtcatgttcggtgtccgt 6770508  T
Q  458 atccttatctatgcttcatagg 479  Q
    |||| ||||  |||||||||||    
T  6770507 atccgtatccgtgcttcatagg 6770486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 357 - 461
Target Start/End: Original strand, 19820390 - 19820492
Alignment:
Q  357 ggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctg 456  Q
    |||||||||||| ||||||  |||||  ||| |||||||  |||||||||||||| |||| ||||||| || |||||||||||||||||||||||||| |    
T  19820390 ggtgtccgacaccgacacttataattgtacttaattatg--attttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccg 19820487  T
Q  457 tatcc 461  Q
    |||||    
T  19820488 tatcc 19820492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 370 - 442
Target Start/End: Complemental strand, 14674321 - 14674249
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    |||||| ||||||||||| |||||||| ||||| |||||||| ||||||||||||||| ||||||||||||||    
T  14674321 gacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 363 - 454
Target Start/End: Original strand, 37328844 - 37328935
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| |||||  |||||||||||||||| ||| |||||  ||||||| | |||||||||| ||||||||||||||||||||| |||||||    
T  37328844 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgttcggtgtc 37328935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 313 - 438
Target Start/End: Complemental strand, 10298675 - 10298553
Alignment:
Q  313 atacccctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattac 412  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||   | |||||| |||||| ||||||||| || ||||||| | ||| ||||||||     
T  10298675 atactcctatgaagcacggacactcctcggattaggcgtg-tccg--atacgacaccgacacttgtaattacattgtattatgtgactttttcaaattat 10298579  T
Q  413 tagctgtgtcggcgtatcagtgtccg 438  Q
    ||| ||||||||||| | ||||||||    
T  10298578 tagttgtgtcggcgtgttagtgtccg 10298553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 321 - 457
Target Start/End: Original strand, 16203746 - 16203889
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgttccggtgt-------ccgacactgacactcgtaattacactgaattatgtcattttctcaaattact 413  Q
    ||||||||| |||||| ||||||||| |||||| |||||||       ||||||| |||||   |||||||||| |||||||  |||||||||||||| |    
T  16203746 atgaagcacagacactcctcggattaagcgtgtaccggtgtgtcttgtccgacaccgacacatataattacactaaattatgagattttctcaaattatt 16203845  T
Q  414 agctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||| |||||||| | | |||||||||||| ||| ||||||||||    
T  16203846 agcagtgtcggcatgttagtgtccgtgtcatgttcggtgtctgt 16203889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 15884096 - 15883982
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttcc-----ggtgtccgacactgacactcgtaattacactgaattatgtca-ttttctcaaattac 412  Q
    ||||||| ||| |||||| |||||||||||||||||||      ||||||||||| |||||| |||||||||||||||||||| | |||| | ||||||     
T  15884096 ctatgaaacacagacactcctcggattaggcgtgttccagtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttttaaattat 15883997  T
Q  413 tagctgtgtcggcgt 427  Q
    | |||||||||||||    
T  15883996 ttgctgtgtcggcgt 15883982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 382 - 452
Target Start/End: Original strand, 19552562 - 19552632
Alignment:
Q  382 tacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtg 452  Q
    |||||| |||||||| ||||| |||||||| || |||||||||||| |||||||||||||||||| |||||    
T  19552562 tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgttcggtg 19552632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 31084375 - 31084309
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    |||||| ||||||||| |||||||||| ||||| |||||||| ||||||||||||||| ||||||||    
T  31084375 gacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 447
Target Start/End: Original strand, 15410465 - 15410532
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    |||||||||||| || | ||||||| |||||| |||| |||||||||| |||||||||||||||||||    
T  15410465 attacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 454
Target Start/End: Complemental strand, 21542089 - 21541998
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| |||||| |||||||||||||||||||| || || | |||||| ||| ||||||||| | ||| |||| |||||||||| ||||||    
T  21542089 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgtcaatgtctgtgtcgtgtctggtgtc 21541998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 433
Target Start/End: Complemental strand, 33178089 - 33178014
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagt 433  Q
    ||||||||||| |||||| ||||||||||| |||||||| ||||| | |||||| ||| ||||||||||| |||||    
T  33178089 gtgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 437
Target Start/End: Complemental strand, 42893424 - 42893345
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtcc 437  Q
    ||||| ||||| |||||| |||||||||||| ||||||| ||||| |||||||| |||||||||||| || || ||||||    
T  42893424 gtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgtccgtgtcc 42893345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 442
Target Start/End: Complemental strand, 43001851 - 43001780
Alignment:
Q  371 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||| |||||||||||||||||||| ||||| |||||||| |||| |||||| | | ||||||||||||||    
T  43001851 acacttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtc 43001780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 485 - 539
Target Start/End: Original strand, 6316994 - 6317048
Alignment:
Q  485 gtatgtgctcctaaactaaatgtcttctaagtgtgtaagatctgccagaggatac 539  Q
    ||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||    
T  6316994 gtatgtgcttctaaactaaatgtcttctaagtgtgtaccatctgtcagaggatac 6317048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 384 - 454
Target Start/End: Complemental strand, 21137727 - 21137657
Alignment:
Q  384 cactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||||| |||||||||||| |||| || |  ||||||||| ||||||||||||| ||||||||||||    
T  21137727 cactgaattacgtcattttctcagattattaccgatgtcggcgtgtcagtgtccgtgttgtgtccggtgtc 21137657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 460
Target Start/End: Complemental strand, 26312833 - 26312731
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||| || ||   ||||||||||||||||  | |||||||||||||| | || || ||||| ||||||||||| |||||||||| ||||| ||    
T  26312833 gtgtccgacaccgatacatataattacactgaattaattgattttctcaaattatttgcggtatcggcatatcagtgtccatgtcgtgtccagtgtccgt 26312734  T
Q  458 atc 460  Q
    |||    
T  26312733 atc 26312731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 377 - 427
Target Start/End: Complemental strand, 27932280 - 27932230
Alignment:
Q  377 gtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    |||||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  27932280 gtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgt 27932230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 449
Target Start/End: Complemental strand, 41633794 - 41633708
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||||| |||| | |||||||||||||||||||| | ||| |||||||| |||||||||||| || ||||| || |||| |||||||    
T  41633794 cgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgtcagtatctgtgtggtgtccg 41633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 378 - 476
Target Start/End: Complemental strand, 41995515 - 41995417
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcat 476  Q
    |||||||| |||||||||| ||||| || ||||| ||| ||||||||||| |||||||| ||||||| ||| ||||| || ||| ||||  ||||||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccgtgtccgtatccgtgcttcat 41995417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 380 - 454
Target Start/End: Complemental strand, 42469263 - 42469189
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||| || |||||||||||||||||||| || | |||||||||| ||| | |||||||||||| |||||||    
T  42469263 attacactaaaatatgtcattttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtc 42469189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 43565001 - 43564951
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| |||||    
T  43565001 cctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacac 43564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 427
Target Start/End: Original strand, 28588669 - 28588738
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    ||||||||||| |||||   ||||||||||||||||||| |||||||||||||| || | ||||||||||    
T  28588669 gtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgt 28588738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 425
Target Start/End: Original strand, 38464312 - 38464426
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccga-------cactgacactcgtaattacactgaattatgtcattttctcaaatt 410  Q
    |||||||||||| |||||| ||||||||||| |||| |||||||| ||       ||||||||||  ||||| || ||||| |||| |||||||||||||    
T  38464312 cctatgaagcacagacactcctcggattaggtgtgtcccggtgtcggacatgtgccactgacacttataatttcaatgaataatgtgattttctcaaatt 38464411  T
Q  411 actagctgtgtcggc 425  Q
    | ||| |||||||||    
T  38464412 attagttgtgtcggc 38464426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 3966547 - 3966488
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtcc 437  Q
    ||||||||||||||| ||| |||||||||||||| |||| |||||||| | |||||||||    
T  3966547 taattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtcc 3966488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 451
Target Start/End: Complemental strand, 4105310 - 4105228
Alignment:
Q  371 acactcgtaattacactgaattatgtca--ttttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggt 451  Q
    ||||| |||||||||||||||||||| |  |||| |||||||| ||| | ||||||||| ||||| |||||||| ||||||||    
T  4105310 acacttgtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgtgtcatgtccggt 4105228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 14873642 - 14873599
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgt 361  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  14873642 cctatgaagcacggacactcctcggattaggcgtgtcccggtgt 14873599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 454
Target Start/End: Original strand, 41558707 - 41558774
Alignment:
Q  387 tgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||||||||||||||||| ||  ||||||   || |||||||||||||||| |||||||||    
T  41558707 tgaattatgtcattttctcaaattattatttgtgtcaatgtgtcagtgtccgtgtcgtatccggtgtc 41558774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 478
Target Start/End: Original strand, 26205777 - 26205875
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 478  Q
    ||||||||||||||||||||||||||||| |  || | || ||| ||| ||||||||| |||| ||||||||||| || ||  | || |||||||||||    
T  26205777 attacactgaattatgtcattttctcaaaattttatcggtatcgacgtgtcagtgtccatgtcatgtccggtgtccgtgtctgtgtccatgcttcatag 26205875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 363 - 424
Target Start/End: Complemental strand, 7677764 - 7677703
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    |||||| ||||||  ||||| ||||||||||||| ||||| |||||||| ||||||||||||    
T  7677764 cgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcgg 7677703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 358 - 435
Target Start/End: Original strand, 7997162 - 7997238
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgt 435  Q
    ||||||||||| ||||||  ||||||||||| ||||| |||||||||||||||| || | |||| ||||| |||||||    
T  7997162 gtgtccgacac-gacacttataattacactgtattatatcattttctcaaattattatccgtgttggcgtgtcagtgt 7997238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 358 - 415
Target Start/End: Original strand, 21194200 - 21194257
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactag 415  Q
    |||||||||||| ||||   | ||||||||||||||||| ||||||||||||||||||    
T  21194200 gtgtccgacactaacaccaatgattacactgaattatgtgattttctcaaattactag 21194257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 364 - 437
Target Start/End: Original strand, 21351906 - 21351979
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtcc 437  Q
    ||||| |||||| |||||||||||||||||||| | ||| || ||||| ||| |||||||| || |||||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtcc 21351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 422
Target Start/End: Original strand, 6471904 - 6471948
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||    
T  6471904 taattacactgaattatgtgattttctcaaattattagccgtgtc 6471948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 14422946 - 14422877
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||||||||||||| |||||   |||||| ||||||| |||| || ||||||||| |||||||||||    
T  14422946 taattacactgaattatgtgattttt--aaattattagctgtatcggtgtgtcagtgtccttgtcgtgtccg 14422877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 478
Target Start/End: Complemental strand, 17123080 - 17122993
Alignment:
Q  390 attatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 478  Q
    ||||||| |||||||||||||| |||| |||| ||||| ||||||||| |||  |||||| |||| || ||| ||||| ||||||||||    
T  17123080 attatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccatgttatgtccgatgtccgtgtcc-tatctgtgcttcatag 17122993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 19820328 - 19820376
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||||||||||||||||| ||| |||||||||||| |||||||| ||||    
T  19820328 ctatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 422
Target Start/End: Original strand, 24273045 - 24273089
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    ||||||||||||||||||| |||||||||||||| || |||||||    
T  24273045 taattacactgaattatgtgattttctcaaattaataactgtgtc 24273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 422
Target Start/End: Complemental strand, 24389169 - 24389125
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    ||||||||||||||||||| |||||||||||||| || |||||||    
T  24389169 taattacactgaattatgtgattttctcaaattaataactgtgtc 24389125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 454
Target Start/End: Original strand, 30502383 - 30502479
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||| |||||   |||||||||||||||| || |||||||||||||| |||| ||||  | || |||| ||  ||| |||||||||||||    
T  30502383 gtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgtttgggtttcagcgtatgtgacgtgtccggtgtc 30502479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 454
Target Start/End: Original strand, 30542726 - 30542822
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||| |||||   |||||||||||||||| || |||||||||||||| |||| ||||  | || |||| ||  ||| |||||||||||||    
T  30542726 gtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgtttgggtttcagcgtatgtgacgtgtccggtgtc 30542822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 454
Target Start/End: Original strand, 22299485 - 22299571
Alignment:
Q  367 actgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| || ||||||| ||||||| |||| ||||| | |||||| |||||||||||| || ||| | |||||||||| |||||||||    
T  22299485 actgacccttgtaattatactgaatcatgtgatttttt-aaattattagctgtgtcggtgtgtcaatatccgtgtcgtatccggtgtc 22299571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 411
Target Start/End: Complemental strand, 31264480 - 31264449
Alignment:
Q  380 attacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||||||||||||||||||||||||    
T  31264480 attacactgaattatgtcattttctcaaatta 31264449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 34879452 - 34879330
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 418  Q
    ||||| ||||||||||||||||  |||||  |||| ||| |||||||||  |||||   | ||||||||||||||| | |||||||||||||  |||| |    
T  34879452 ctatggagcacggacacttctcttattagcggtgtcccg-tgtccgacatcgacacatattattacactgaattatatgattttctcaaatttttagcgg 34879354  T
Q  419 tgtcggcgtatcagtgtccgtgtc 442  Q
    || |||||| || || ||||||||    
T  34879353 tgccggcgtgtccgtatccgtgtc 34879330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 39698671 - 39698628
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    |||||||||||||||||| ||||||||||||||||  |||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtc 39698628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 410
Target Start/End: Original strand, 41558654 - 41558701
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaatt 410  Q
    ||||||||||||   |||||||| ||||||||||||||||||||||||    
T  41558654 cgacactgacacatttaattacattgaattatgtcattttctcaaatt 41558701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 357 - 411
Target Start/End: Complemental strand, 2548452 - 2548398
Alignment:
Q  357 ggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    |||||||||||| ||||||  | ||||||||||||||||| |||||||| |||||    
T  2548452 ggtgtccgacaccgacacttatgattacactgaattatgtaattttctctaatta 2548398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 436
Target Start/End: Complemental strand, 6035526 - 6035469
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    ||||||||||||||||| | |||| ||||||||| |||| |||||||||| ||||||||    
T  6035526 taattacactgaattatattattt-ctcaaattattagcggtgtcggcgtgtcagtgtc 6035469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 348
Target Start/End: Original strand, 7218217 - 7218247
Alignment:
Q  318 cctatgaagcacggacacttctcggattagg 348  Q
    |||||||||||||||||||||||||||||||    
T  7218217 cctatgaagcacggacacttctcggattagg 7218247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 443
Target Start/End: Complemental strand, 9449510 - 9449448
Alignment:
Q  381 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcg 443  Q
    ||||| |||||||||| |||||||||||||| ||   ||||||||||  ||||||||||||||    
T  9449510 ttacattgaattatgtgattttctcaaattattattggtgtcggcgtgccagtgtccgtgtcg 9449448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 17123166 - 17123132
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||||| ||||||||||||||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgt 17123132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 19168838 - 19168900
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    |||||||||||| |||| ||||| |||||||| |||| |||| || || ||||||||||||||    
T  19168838 attacactgaataatgtgattttatcaaattaatagcggtgtaggtgtgtcagtgtccgtgtc 19168900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 416
Target Start/End: Original strand, 21194138 - 21194176
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagc 416  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  21194138 taattacactgaatgatgtgattttctcaaattactagc 21194176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 21576685 - 21576719
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||||| ||||||||||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgt 21576719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 22423764 - 22423798
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||||| ||||||||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgt 22423798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 449
Target Start/End: Complemental strand, 30135372 - 30135286
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttct-caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||| |||||| ||||||||| ||| |||||| ||||| | ||||||| ||| ||||||||||| || || || ||||||||||||    
T  30135372 gacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtccg 30135286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 35017162 - 35017128
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||||| ||||||||||||||||    
T  35017162 ctatgaagcacggacactcctcggattaggcgtgt 35017128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 368
Target Start/End: Original strand, 39268541 - 39268587
Alignment:
Q  322 tgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||| |||||||||||||||| || ||||| |||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacac 39268587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 414
Target Start/End: Original strand, 43208291 - 43208325
Alignment:
Q  380 attacactgaattatgtcattttctcaaattacta 414  Q
    |||||| ||||||||||||||||||||||||||||    
T  43208291 attacattgaattatgtcattttctcaaattacta 43208325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 368
Target Start/End: Complemental strand, 17088402 - 17088361
Alignment:
Q  327 cacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||| |||||||||||||||| |||||||| |||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggacac 17088361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 411
Target Start/End: Complemental strand, 25863248 - 25863215
Alignment:
Q  378 taattacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||||||||| ||||||||||||||||    
T  25863248 taattacactgaattatatcattttctcaaatta 25863215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 449
Target Start/End: Complemental strand, 26716178 - 26716117
Alignment:
Q  388 gaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||| |||||||||||||| |||| |||||||| | ||| ||||  |||||||||||    
T  26716178 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgtccg 26716117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 449
Target Start/End: Complemental strand, 26985918 - 26985857
Alignment:
Q  388 gaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||| |||||||||||||| |||| |||||||| | ||| ||||  |||||||||||    
T  26985918 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgtccg 26985857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 442
Target Start/End: Complemental strand, 43564945 - 43564863
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||| ||||||  |||||||||| |||||||| |||||  |||||||   | ||||||||||| ||||||| ||||||    
T  43564945 gtgtccgacaccgacacttataattacactaaattatgtgatttttccaaatta--tgatgtgtcggcgtgtcagtgttcgtgtc 43564863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 2577197 - 2577241
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    |||||||| ||||||||||||||||||||||| || | |||||||    
T  2577197 attacactaaattatgtcattttctcaaattattatcggtgtcgg 2577241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 6401542 - 6401466
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||| ||| ||| ||||||| |||    ||| ||||||||||| || |||||||||||| ||||||||||    
T  6401542 taattacactgtattttgtgattttctaaaaaatttagttgtgtcggcgtgtcggtgtccgtgtcgcgtccggtgtc 6401466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 7677835 - 7677787
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    ||||||||||| ||| || |||||||||||||||| |||||||| ||||    
T  7677835 ctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggaca 7677787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 15086598 - 15086554
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||    
T  15086598 cctatgaagcaaagacactcctcggattaggcgtgttccgatgtc 15086554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 411
Target Start/End: Complemental strand, 19438386 - 19438354
Alignment:
Q  379 aattacactgaattatgtcattttctcaaatta 411  Q
    |||||||||||||||||| ||||||||||||||    
T  19438386 aattacactgaattatgtgattttctcaaatta 19438354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 321 - 353
Target Start/End: Original strand, 21190998 - 21191030
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||| ||||||||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgt 21191030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 21194063 - 21194111
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||| ||||||||||||| |||||||||||||||  |||||||| ||||    
T  21194063 ctataaagcacggacactcctcggattaggcgtgccccggtgtctgaca 21194111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 446
Target Start/End: Original strand, 22423827 - 22423895
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 446  Q
    |||||| | |||||||||| |||||||||||||| |||  ||||| | || ||||| ||||||||||||    
T  22423827 taattatattgaattatgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 438
Target Start/End: Complemental strand, 30098370 - 30098310
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccg 438  Q
    |||||||| |||||||||| |||||||||||||| || | || ||| ||| ||||||||||    
T  30098370 taattacattgaattatgtgattttctcaaattattaacggtttcgtcgtgtcagtgtccg 30098310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 318 - 358
Target Start/End: Complemental strand, 39758380 - 39758340
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccgg 358  Q
    ||||||||||| ||||||| ||||||| |||||||||||||    
T  39758380 cctatgaagcatggacactcctcggataaggcgtgttccgg 39758340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 422
Target Start/End: Original strand, 41091272 - 41091316
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    ||||||||||||||||||| |||||||||||| | |||| |||||    
T  41091272 taattacactgaattatgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 321 - 353
Target Start/End: Complemental strand, 43001922 - 43001890
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||| ||||||||||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgt 43001890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 7e-38; HSPs: 109)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 319 - 479
Target Start/End: Complemental strand, 7938219 - 7938059
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 418  Q
    |||||||||||||||||| ||||||| ||||||||  ||||||| ||||| ||||||  |||||||||| |||||| | ||||| |||||||| ||||||    
T  7938219 ctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctg 7938120  T
Q  419 tgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatagg 479  Q
    ||||||||| ||||||||| |||||||||||||||| || ||| ||||  |||||||||||    
T  7938119 tgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcatagg 7938059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 363 - 477
Target Start/End: Complemental strand, 16766756 - 16766642
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 462  Q
    |||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||| |||||||||||||||| || |||     
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccg 16766657  T
Q  463 tatctatgcttcata 477  Q
    |||| ||||||||||    
T  16766656 tatccatgcttcata 16766642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 363 - 449
Target Start/End: Complemental strand, 12696383 - 12696297
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||    
T  12696383 cgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 12696297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 358 - 454
Target Start/End: Complemental strand, 34595198 - 34595102
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||| ||||||||||| ||| ||||||||||||||||||||||    
T  34595198 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtc 34595102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 318 - 478
Target Start/End: Original strand, 426477 - 426629
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagct 417  Q
    ||||||||||||||||||| ||| ||||||||||||        ||||||| |||||| ||||||||| | |||||||| ||||| |||||||| || ||    
T  426477 cctatgaagcacggacactcctcagattaggcgtgt--------ccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaact 426568  T
Q  418 gtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 478  Q
    |||||||||| ||||||||||||||||||||||| || || ||  |||| |||||||||||    
T  426569 gtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtctgtatccatgcttcatag 426629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 358 - 454
Target Start/End: Original strand, 7977825 - 7977921
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||| ||| |||||||||| |||||    
T  7977825 gtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtc 7977921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 358 - 478
Target Start/End: Original strand, 8776968 - 8777088
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    |||||||||||  ||||| |||||||||||||||| ||| ||||| |||||||| ||| ||||||||||| ||||||||||||||||||||| |||| ||    
T  8776968 gtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgt 8777067  T
Q  458 atccttatctatgcttcatag 478  Q
     ||| ||||  ||||||||||    
T  8777068 gtccgtatccgtgcttcatag 8777088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 363 - 479
Target Start/End: Original strand, 9107370 - 9107486
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 462  Q
    |||||| |||||| |||||||||||||||| ||| ||||| |||||||| ||||||||||||||| | |||||||||||||||||||||||| || ||      
T  9107370 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgtgtcag 9107469  T
Q  463 tatctatgcttcatagg 479  Q
    ||||  |||||||||||    
T  9107470 tatccgtgcttcatagg 9107486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 319 - 478
Target Start/End: Complemental strand, 9027286 - 9027122
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc-----cgacactgacactcgtaattacactgaattatgtcattttctcaaattact 413  Q
    |||||||||||  ||||| || ||||||| ||||| ||||||||     |||||| |||||   ||||||||| ||||||||| ||| |||||||||| |    
T  9027286 ctatgaagcacaaacactccttggattagccgtgtcccggtgtcggacacgacaccgacacatataattacacggaattatgtgattatctcaaattatt 9027187  T
Q  414 agctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 478  Q
    ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||  ||||||||||    
T  9027186 agcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgtgtccgtatcggtgcttcatag 9027122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 363 - 461
Target Start/End: Original strand, 8365519 - 8365617
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    |||||| |||||| |||||||||| ||||||||| || || |||||||| ||| ||||||||||| ||||||||||||||||||| |||||| ||||||    
T  8365519 cgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatcc 8365617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 320 - 449
Target Start/End: Complemental strand, 31959268 - 31959132
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacact-------gacactcgtaattacactgaattatgtcattttctcaaattac 412  Q
    ||||||||||||||||| ||||||||||| |||| |||||||| |||||        |||||| |||||||||||| ||||||| ||||| ||||||||     
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtcgccgacacttgtaattacactgcattatgtgattttttcaaattat 31959169  T
Q  413 tagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||||||| |||||| ||||||| |||||| ||||||    
T  31959168 tagctgtgacggcgtgtcagtgttcgtgtcatgtccg 31959132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 322 - 422
Target Start/End: Original strand, 9025448 - 9025553
Alignment:
Q  322 tgaagcacggacacttctcggattaggcgtgttccggtgtc-----cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagc 416  Q
    |||||||||||||||||||||||||||||||| ||||||||     |||||| |||||   ||||||||||||||||||| |||||||||||||| ||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagc 9025547  T
Q  417 tgtgtc 422  Q
     |||||    
T  9025548 agtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 361 - 461
Target Start/End: Original strand, 853857 - 853957
Alignment:
Q  361 tccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 460  Q
    |||||||| |||||| |||||| |||| |||||||| ||||| |||||||| ||| ||||||||||| ||||  |||||||||||||||||||| |||||    
T  853857 tccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatc 853956  T
Q  461 c 461  Q
    |    
T  853957 c 853957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 358 - 442
Target Start/End: Original strand, 17841584 - 17841668
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||| | |||| ||||||||||| |||||||| ||||| |||||||| ||||||||||||||| ||||||||||||||    
T  17841584 gtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 358 - 442
Target Start/End: Complemental strand, 28152162 - 28152079
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||| ||||||||| ||||||||||||||    
T  28152162 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt-tcaaattattagctttgtcggcgtgtcagtgtccgtgtc 28152079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 457
Target Start/End: Complemental strand, 6389851 - 6389708
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccga-cactgacact---cgta--attacactgaattatgtcattttctcaaattac 412  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||| |||||    | ||  |||||||| |||||| ||||||||||||||||     
T  6389851 ctatgaagcacggacacttctcggattaggagtgtcccg-tgtcggaacaccgacacgacacctatgattacactaaattatatcattttctcaaattat 6389753  T
Q  413 tagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    || | |||||||||| | |||||||||||||||||||||||||||    
T  6389752 tatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgt 6389708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 461
Target Start/End: Complemental strand, 9658923 - 9658841
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||||||||||||||||| ||||||| |||||| |||| |||||||||| |||||||||||||||||| | ||||||||||||    
T  9658923 taattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt-ctgtgtctgtatcc 9658841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 363 - 449
Target Start/End: Original strand, 10770674 - 10770760
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||||| |||||| |||||||||||||||||||| ||||| |||||||| ||| ||||| ||||| ||||||||| |||||||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtccg 10770760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 427
Target Start/End: Original strand, 21924910 - 21924999
Alignment:
Q  338 ctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    |||||||||||||||| |||||||||||||| |||||   ||||||||||||||||| | || ||||||||||| |||| ||||||||||    
T  21924910 ctcggattaggcgtgtcccggtgtccgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtcggcgt 21924999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 365 - 449
Target Start/End: Complemental strand, 16833365 - 16833281
Alignment:
Q  365 acactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||| |||||| |||||||||||||| ||||| ||||| |||||||| ||| ||||||||||| |||||||| ||||||||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccg 16833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 365 - 449
Target Start/End: Complemental strand, 17435256 - 17435172
Alignment:
Q  365 acactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||| ||||| |||||||||||||||||||| ||||| | |||||| ||||| ||||| |||||||||||||||||||| ||||    
T  17435256 acactaacacttgtaattacactgaattatgtaattttttaaaattattagctatgtcgacgtatcagtgtccgtgtcgtatccg 17435172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 378 - 461
Target Start/End: Complemental strand, 3398662 - 3398580
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||||||||||||||| | ||||| |||||||| ||||||||||||||| |||||||||||||||||| || |||| ||||||    
T  3398662 taattacactgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatcc 3398580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 454
Target Start/End: Original strand, 5732474 - 5732601
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 418  Q
    |||||||||| ||||||| ||||||||||||||||        ||||||| |||||   |||||||||| || ||||| |||||||||||||| || | |    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgt--------ccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacgg 5732565  T
Q  419 tgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||| ||||||||| |||||||||| |||||    
T  5732566 tgtcggcgtgtcagtgtccatgtcgtgtccagtgtc 5732601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 370 - 479
Target Start/End: Complemental strand, 1681810 - 1681701
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctat 469  Q
    |||||| ||||||||||||||||| || ||||| |||||||| ||| ||||||||||| | |||||  ||||||||| |||||||||| ||  ||||  |    
T  1681810 gacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgttcggtgtctgtgtctgtatccgt 1681711  T
Q  470 gcttcatagg 479  Q
    ||||||||||    
T  1681710 gcttcatagg 1681701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 378 - 479
Target Start/End: Original strand, 34290092 - 34290193
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    ||||||||||||||||||| ||| || ||||||| ||| ||||||||| | |||||||  ||||| | |||||||||||| ||| ||||| |||||||||    
T  34290092 taattacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagtgtttgtgtcttatccggtgtctgtgtccgtatctgtgcttcata 34290191  T
Q  478 gg 479  Q
    ||    
T  34290192 gg 34290193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 438
Target Start/End: Original strand, 7265588 - 7265668
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccg 438  Q
    ||||||||||| |||||   ||||||||||||||||||| |||||||||||||| |||| |||| ||||| ||||||||||    
T  7265588 gtgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 446
Target Start/End: Complemental strand, 13851780 - 13851712
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 446  Q
    |||||||||||||||| || |||||||||||||| |||| |||||| ||| ||||||||||||||||||    
T  13851780 taattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 422
Target Start/End: Complemental strand, 28715359 - 28715295
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| |||||||| |||| |||||    
T  28715359 gtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgtc 28715295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 378 - 460
Target Start/End: Complemental strand, 6665257 - 6665177
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 460  Q
    ||||||| ||||||||||| |||| ||||||||| |||| || |||||||||  ||||||||||||||| |||||||||||||    
T  6665257 taattactctgaattatgtgatttactcaaattattagcggtttcggcgtat--gtgtccgtgtcgtgttcggtgtctgtatc 6665177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 378 - 457
Target Start/End: Complemental strand, 9629427 - 9629348
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    |||||||| |||||||||| |||||||||||||| | || |||||||||| ||| | |||||||||||||| ||||||||    
T  9629427 taattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtccagtgtctgt 9629348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 358 - 433
Target Start/End: Complemental strand, 19040416 - 19040341
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagt 433  Q
    ||||||||||| |||||   ||||||||||||||||||| |||||||||||||| |||| |||||||||| |||||    
T  19040416 gtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 460
Target Start/End: Original strand, 7996393 - 7996475
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 460  Q
    ||||||||||||||||| | |||||||||||||| |||| |||||||| | ||||||||| |||| ||| | |||||||||||    
T  7996393 taattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtccttgtcatgtactgtgtctgtatc 7996475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 460
Target Start/End: Complemental strand, 8022408 - 8022326
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 460  Q
    ||||||||||||||||| | |||||||||||||| |||| |||||||| | ||||||||| |||| ||| | |||||||||||    
T  8022408 taattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtccttgtcatgtactgtgtctgtatc 8022326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 457
Target Start/End: Original strand, 21395308 - 21395401
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    |||||| |||||| ||||||||||| |||||||| |||||||||||||| |||| |||| ||||| || |||||| |||| | ||||||||||||    
T  21395308 cgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtcggtgtccatgtcatatccggtgtctgt 21395401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 454
Target Start/End: Complemental strand, 3209442 - 3209350
Alignment:
Q  362 ccgacactgacactcgtaattacactgaattatgtcattttct-caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||| |||||| ||||| ||||| |||||||| ||||| | ||||||| ||||||||||||||| || |||| ||||||||||||||||||    
T  3209442 ccgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtctgtgt-cgtgtcgtgtccggtgtc 3209350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 478
Target Start/End: Original strand, 8805523 - 8805687
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccg-gtgtccgacactg-ac--actcgtaattacactgaattatgtcattttctcaaattact 413  Q
    ||||||||||||||||||| |||||||||||| ||| ||  ||||| ||||||  ||  || | |||||||||| |||||||| |||||||||||||| |    
T  8805523 cctatgaagcacggacactcctcggattaggcatgtcccacgtgtctgacactacaccgacacataattacactaaattatgtgattttctcaaattatt 8805622  T
Q  414 agctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 478  Q
    ||| ||| || ||| || ||||| |||||||||| ||||| ||| |   |||| |||||||||||    
T  8805623 agcagtgccgacgtgtcggtgtctgtgtcgtgtctggtgtttgtgtatgtatccatgcttcatag 8805687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 445
Target Start/End: Original strand, 17341669 - 17341746
Alignment:
Q  368 ctgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtg 445  Q
    ||||||||  ||||||||||||||||||| ||||| |||||||| || | |||||||||| |||||| ||||||||||    
T  17341669 ctgacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgtgtcgtg 17341746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 13360387 - 13360463
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| ||| || |||| ||| |||||||| |||||    
T  13360387 taattacactgaattatgtgattttctcaaattactagtggtgtcgacgtgtctgtgttcgtatcgtgtccagtgtc 13360463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 34073362 - 34073438
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||||||||||  |||||||||||||| ||||  ||| ||| | |||||||||||||||||||| |||||    
T  34073362 taattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagtgtc 34073438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 411
Target Start/End: Complemental strand, 1700454 - 1700363
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    |||||| |||||||||| || | ||||||||| ||| |||||||||||| ||||||  ||||||||||||| ||||| ||||| | ||||||    
T  1700454 tatgaaacacggacactccttgaattaggcgtattctggtgtccgacaccgacacttataattacactgaaatatgtgatttttttaaatta 1700363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 377 - 479
Target Start/End: Original strand, 5970122 - 5970218
Alignment:
Q  377 gtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcat 476  Q
    |||||||||||||||||||| ||||| |||||||| || |||||||| |      ||||||||||| ||||||||||| || ||| ||||| ||||||||    
T  5970122 gtaattacactgaattatgtgattttttcaaattattaactgtgtcgac------gtgtccgtgtcatgtccggtgtccgtgtccgtatctgtgcttcat 5970215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 449
Target Start/End: Original strand, 6898276 - 6898367
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||||| |||||| ||||||||||| |||||||| ||||  |||||||| |||  ||||| |||| ||||||||| | |||||||||    
T  6898276 gtgtccgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcagcgtgtcagtgtccatatcgtgtccg 6898367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 383 - 454
Target Start/End: Original strand, 10339146 - 10339217
Alignment:
Q  383 acactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||||||||| |||||||||||||| | || |||||||||| ||||||| | |||||||||| |||||    
T  10339146 acactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttcatgtcgtgtcctgtgtc 10339217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 461
Target Start/End: Complemental strand, 7930364 - 7930266
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    |||||| |||||| | |||| |||| |||||||| ||||| |||||||| ||  ||||||||| | |||||||||||   |||||||||||||||||||    
T  7930364 cgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgttctgtgtccggtgtctgtatcc 7930266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 446
Target Start/End: Complemental strand, 4878007 - 4877918
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtca-ttttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 446  Q
    ||||||||||| |||||| ||||||| ||| |||||||| | |||| |||||||| |||||||||||| || ||| | ||||||||||||    
T  4878007 gtgtccgacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcggtgtgtcactatccgtgtcgtgt 4877918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 427
Target Start/End: Original strand, 7801155 - 7801220
Alignment:
Q  362 ccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    ||||||| |||||| |||||||| ||||||||||| ||||| |||||||| ||| |||||||||||    
T  7801155 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgt 7801220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 459
Target Start/End: Original strand, 30866159 - 30866240
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtat 459  Q
    |||||||| |||||||||| |||||||||||||| |||| |||| || || || ||||| ||||| ||||||||||| ||||    
T  30866159 taattacattgaattatgtgattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtat 30866240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 463
Target Start/End: Original strand, 33001284 - 33001388
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||| |||||   |||||||| | |||||||| ||||| |||||||| |||| |||||||||| ||| || |||||| |||||| ||||||||    
T  33001284 gtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtcattgaccgtgttgtgtcc-gtgtctgt 33001382  T
Q  458 atcctt 463  Q
    | ||||    
T  33001383 accctt 33001388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 451
Target Start/End: Original strand, 17327655 - 17327743
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggt 451  Q
    ||||||||||||   || ||||||| |||||||| ||||||||||| |  ||| ||||||||||||||| ||||  |||||||||||||    
T  17327655 cgacactgacacatatagttacactaaattatgtgattttctcaaaatcttagttgtgtcggcgtatcactgtctatgtcgtgtccggt 17327743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 478
Target Start/End: Complemental strand, 18367880 - 18367781
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    ||||||||||| ||| ||| ||||||| |||  | ||||||||||||||| || |||||| |||||||||||||||| || ||| ||||  |||||||||    
T  18367880 taattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc-gtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcata 18367782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 19044508 - 19044432
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||| |||||||||||||| || ||||||||||| |||  |||||||||| ||||||||| |||||| | |||||||    
T  19044508 taataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtccatgtcgtattcggtgtc 19044432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 411
Target Start/End: Complemental strand, 31384979 - 31384931
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  31384979 cgacactgacacttgtaattacactgaattatgtgattttttcaaatta 31384931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 449
Target Start/End: Original strand, 31579222 - 31579311
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||||| |||||   ||||||||||||||||||| |||||||||||||| || | |||| || ||  |||||||| |||||||||||    
T  31579222 gtgtccgacaccgacaca--taattacactgaattatgtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtgtccg 31579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 454
Target Start/End: Original strand, 5000642 - 5000717
Alignment:
Q  379 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||| ||||||| |||| |||||||| ||||| |||| |||||| ||| ||||| |||||||| |||||||||||    
T  5000642 aattatactgaatcatgtgattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtc 5000717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 447
Target Start/End: Complemental strand, 7086905 - 7086770
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgt-tccggtgtccgacact-----gacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||||||| ||| |||||||||||| ||| ||  ||||| ||||||     |||||   |||||||||| |||||||| ||||||||||||||    
T  7086905 cctatgaagcacggaaactcctcggattaggcatgtctcacgtgtctgacactacaccgacacatataattacactaaattatgtgattttctcaaatta 7086806  T
Q  412 ctagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
     |||| ||| || ||| || ||||| ||||||||||    
T  7086805 ttagcagtgccgacgtgtcggtgtctgtgtcgtgtc 7086770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 364 - 447
Target Start/End: Original strand, 15489733 - 15489816
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    ||||| |||||| ||||||||| |||||| ||| ||||| |||||||| ||| ||||||| ||| | ||||||||||| |||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgtgttgtgtc 15489816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 453
Target Start/End: Complemental strand, 1532284 - 1532207
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagc--tgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 453  Q
    ||||||||||||||||||| ||||| |||||||| ||||  ||||||| ||| |||||||  ||||||||| ||||||    
T  1532284 taattacactgaattatgtaattttatcaaattattagcggtgtgtcgacgtgtcagtgtttgtgtcgtgttcggtgt 1532207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 17327589 - 17327639
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||||||| |||||||||||||||| || ||||| |||||    
T  17327589 cctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacac 17327639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 440
Target Start/End: Complemental strand, 26562733 - 26562671
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtg 440  Q
    ||||||||||||||||||| |||||||||||||  |||| |||||||||| || |||| ||||    
T  26562733 taattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcgtg 26562671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 427
Target Start/End: Original strand, 32978894 - 32978964
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgt-cattttctcaaattactagctgtgtcggcgt 427  Q
    ||||||||||| |||||| ||||||||||| ||||||||   |||| |||||||| |||||||||||||||    
T  32978894 gtgtccgacaccgacacttgtaattacacttaattatgtgttttttttcaaattattagctgtgtcggcgt 32978964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 359 - 408
Target Start/End: Original strand, 6751878 - 6751927
Alignment:
Q  359 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaa 408  Q
    |||||||||| |||||| || |||||| ||||||||||||||||||||||    
T  6751878 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 6751927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 378 - 427
Target Start/End: Original strand, 8931617 - 8931666
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    |||||| |||||||||||| |||||||||||||  |||||||||||||||    
T  8931617 taattatactgaattatgttattttctcaaatttttagctgtgtcggcgt 8931666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 392 - 461
Target Start/End: Complemental strand, 10649358 - 10649289
Alignment:
Q  392 tatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||| ||||| ||||||||||| | |||||||||||||| |||  ||||||| ||||||||| ||||||    
T  10649358 tatgtaattttatcaaattactaacggtgtcggcgtatcattgtttgtgtcgtatccggtgtccgtatcc 10649289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 318 - 367
Target Start/End: Original strand, 12868615 - 12868664
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||||||||||| ||||||| |||||||||||||||||| ||||| ||||    
T  12868615 cctatgaagcaccgacacttatcggattaggcgtgttcccgtgtcggaca 12868664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 358 - 447
Target Start/End: Complemental strand, 23771642 - 23771554
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    ||||||||||| |||| | |||||||||||||| ||| | ||||| | |||||| || |||||||||||| || ||||||||||| ||||    
T  23771642 gtgtccgacaccgacatttgtaattacactgaagtatataatttttt-aaattattaactgtgtcggcgtgtccgtgtccgtgtcatgtc 23771554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 1191707 - 1191763
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcg 426  Q
    |||||| |||||||||||||||| ||| | ||| |||||||| ||||||||||||||    
T  1191707 gacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcggcg 1191763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 7625166 - 7625090
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| ||| |||||| |||||||||||||||| || | |||||| ||| || ||||| |||||||||||| ||||    
T  7625166 taattatactaaattatatcattttctcaaattattatccgtgtcgacgtgtcggtgtctgtgtcgtgtccgatgtc 7625090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 454
Target Start/End: Complemental strand, 7740705 - 7740610
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||||||||||||   |||||||||| |||| ||| |||||| ||||||| | | ||| || |||| ||||||| ||||||||||| ||||||    
T  7740705 gtgtccgacactgacacatataattacactcaattttgtgattttcacaaattatttgatgtatcagcgtgtcagtgt-cgtgtcgtgtctggtgtc 7740610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 478
Target Start/End: Complemental strand, 10294151 - 10294051
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    |||||||| |||| ||||  ||| |||||||||| |||| || ||||| | ||||| |||||||||||||||||||  || ||| ||||  |||||||||    
T  10294151 taattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 10294052  T
Q  478 g 478  Q
    |    
T  10294051 g 10294051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 20371125 - 20371189
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    |||| ||| ||| |||||| |||||||||||||| |||| |||||||||| ||| ||||||||||    
T  20371125 taatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 20371189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 402
Target Start/End: Original strand, 26402675 - 26402719
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcatttt 402  Q
    ||||||||||| |||||| || |||||||||||||||||||||||    
T  26402675 gtgtccgacaccgacacttgtgattacactgaattatgtcatttt 26402719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 28715415 - 28715371
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||    
T  28715415 cctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtc 28715371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 32839571 - 32839611
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggt 359  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  32839571 ctatgaagcacagacacttctcggattaggcgtgtcccggt 32839611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 4878062 - 4878027
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgt 353  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4878062 cctatgaagcacggacactcctcggattaggcgtgt 4878027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 7378098 - 7378055
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||    
T  7378098 ctatgaagcacggacacttctcagattagccgtgtcccggtgtc 7378055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 7569183 - 7569226
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgt 421  Q
    ||||||||||||||||||| |||||||||||||| || ||||||    
T  7569183 taattacactgaattatgtaattttctcaaattattatctgtgt 7569226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 354
Target Start/End: Original strand, 7723199 - 7723234
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgtt 354  Q
    |||||||||||||||||| |||||||||||||||||    
T  7723199 ctatgaagcacggacactcctcggattaggcgtgtt 7723234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 411
Target Start/End: Complemental strand, 34446607 - 34446576
Alignment:
Q  380 attacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||||||||||||||||||||||||    
T  34446607 attacactgaattatgtcattttctcaaatta 34446576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 34595253 - 34595210
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtc 34595210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 424
Target Start/End: Complemental strand, 7378043 - 7377977
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    ||||||||||| |||||   |||||||| |||||||||| |||||||||||||  |||| |||||||    
T  7378043 gtgtccgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcgg 7377977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 8365447 - 8365497
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||| ||| |||||||||||||||| || ||||| |||||    
T  8365447 cctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacac 8365497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 322 - 368
Target Start/End: Original strand, 8389411 - 8389457
Alignment:
Q  322 tgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||| ||||||||||| |||| |||||||| |||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 8389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 369
Target Start/End: Complemental strand, 19294744 - 19294694
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacact 369  Q
    ||||||||||| ||||| ||| |||||||||||||  ||||||||||||||    
T  19294744 ctatgaagcaccgacacctctaggattaggcgtgtcgcggtgtccgacact 19294694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 361
Target Start/End: Original strand, 21424744 - 21424786
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgt 361  Q
    |||||||||||||||||||||| |||||| |||||| ||||||    
T  21424744 ctatgaagcacggacacttctcagattagccgtgtttcggtgt 21424786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 411
Target Start/End: Original strand, 403859 - 403912
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||| |||||| ||| ||||||| |||||||| ||||| ||||||||    
T  403859 gtgtccgacaccgacacttgtagttacactaaattatgtgattttttcaaatta 403912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 362
Target Start/End: Complemental strand, 5569866 - 5569825
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    |||||||||||||||| ||| |||||||||||||| ||||||    
T  5569866 atgaagcacggacactcctcagattaggcgtgttcaggtgtc 5569825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 368
Target Start/End: Complemental strand, 7248488 - 7248439
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||| |||||||| | ||||| |||||||| |||||    
T  7248488 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacac 7248439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 368
Target Start/End: Complemental strand, 7625235 - 7625186
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||| ||||| || |||||| ||||||||||||||| |||||    
T  7625235 ctatgaagcacgaacactccttggattaagcgtgttccggtgtcggacac 7625186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 9107299 - 9107348
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||| |||||    
T  9107299 ctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacac 9107348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 411
Target Start/End: Original strand, 9195769 - 9195802
Alignment:
Q  378 taattacactgaattatgtcattttctcaaatta 411  Q
    |||||||||| |||||||||||||||||||||||    
T  9195769 taattacactaaattatgtcattttctcaaatta 9195802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 368
Target Start/End: Complemental strand, 9658998 - 9658949
Alignment:
Q  320 tatgaagcacggacacttctcgga-ttaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||||| || ||| ||||||||||||||||||| |||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtcagacac 9658949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 367
Target Start/End: Original strand, 10339053 - 10339102
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    ||||||||||||||||||| ||| |||||||||||| || ||||| ||||    
T  10339053 cctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 10339102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 368
Target Start/End: Complemental strand, 16766827 - 16766778
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||| |  ||||||||||||||| |||||||| |||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacac 16766778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 17168480 - 17168549
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||||||| |||||| |||||||||||||||| || | |||| ||||| ||||||||  |||| ||||||    
T  17168480 attacactaaattatatcattttctcaaattattatcagtgttggcgtgtcagtgtctatgtcatgtccg 17168549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 353
Target Start/End: Original strand, 17841530 - 17841563
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgt 353  Q
    ||||||||||||||||| ||||||||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgt 17841563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 19369876 - 19369831
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaa 408  Q
    |||||| |||||| || |||||| ||||||||||||||||||||||    
T  19369876 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 19369831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 361
Target Start/End: Complemental strand, 31385048 - 31385007
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgt 361  Q
    ||||||||||||||||| || ||||||||||||| |||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgt 31385007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 32511664 - 32511725
Alignment:
Q  361 tccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    ||||||||  |||||  ||||||||||||||||||| ||||||| |||||| |||| |||||    
T  32511664 tccgacaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgtc 32511725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #99
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 2153902 - 2153978
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||||| |||||| ||||||||| |||||| |    |||||||||| || ||||||||||| |||||| ||||    
T  2153902 taattacactaaattatatcattttcttaaattattgttcgtgtcggcgtgtcggtgtccgtgtcatgtccgatgtc 2153978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #100
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 441
Target Start/End: Complemental strand, 2224271 - 2224207
Alignment:
Q  377 gtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgt 441  Q
    |||||||||||||||||| | ||||| | |||||| |||||| |||| | ||||||| |||||||    
T  2224271 gtaattacactgaattatatgatttttttaaattattagctgcgtcgacatatcagtatccgtgt 2224207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #101
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 419
Target Start/End: Complemental strand, 7112837 - 7112781
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgt 419  Q
    ||||||||||||   |||||||| | |||||| ||||||||||||||||||| ||||    
T  7112837 cgacactgacacatataattacatttaattatttcattttctcaaattactatctgt 7112781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #102
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 419
Target Start/End: Original strand, 8781308 - 8781364
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgt 419  Q
    ||||||||||||   |||||||| | |||||| ||||||||||||||||||| ||||    
T  8781308 cgacactgacacatataattacatttaattatttcattttctcaaattactatctgt 8781364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #103
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 411
Target Start/End: Original strand, 9024176 - 9024224
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||||   | |||||| |||||||||||||||||||||||||    
T  9024176 cgacactgacacatatgattacattgaattatgtcattttctcaaatta 9024224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #104
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 392 - 440
Target Start/End: Original strand, 10760870 - 10760918
Alignment:
Q  392 tatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtg 440  Q
    |||||||||||||||||||| || | |||||| ||| ||||||||||||    
T  10760870 tatgtcattttctcaaattattatcagtgtcgacgtgtcagtgtccgtg 10760918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #105
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 410
Target Start/End: Original strand, 11591885 - 11591917
Alignment:
Q  378 taattacactgaattatgtcattttctcaaatt 410  Q
    ||||||||||||||||||| |||||||||||||    
T  11591885 taattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #106
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 358 - 394
Target Start/End: Original strand, 16388212 - 16388248
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattat 394  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  16388212 gtgtccgacaccgacacttgtaattacactgaattat 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #107
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 16388248 - 16388311
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||||||||||| ||||| |||||||| | ||| | ||| ||| ||||||||||||||    
T  16388248 taattacactgaattatgtgattttttcaaattatttgct-tatcgacgtgtcagtgtccgtgtc 16388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #108
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 439
Target Start/End: Original strand, 19147431 - 19147479
Alignment:
Q  391 ttatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 439  Q
    |||||| |||||||||||||| |||||||||| | || |||||||||||    
T  19147431 ttatgtgattttctcaaattattagctgtgtccgtgtgtcagtgtccgt 19147479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #109
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 32511606 - 32511654
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||||||||||||||||| ||| ||||||||||| |||| |||| ||||    
T  32511606 ctatgaagcacggacactcctccgattaggcgtgctccgatgtcagaca 32511654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 96)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 358 - 479
Target Start/End: Original strand, 23292981 - 23293102
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||| |||||| ||||||| |||||||||||| ||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||| ||    
T  23292981 gtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 23293080  T
Q  458 atccttatctatgcttcatagg 479  Q
     ||| ||||| |||||||||||    
T  23293081 gtccgtatctgtgcttcatagg 23293102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 318 - 442
Target Start/End: Complemental strand, 30299049 - 30298926
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttct-caaattactagc 416  Q
    ||||||||||||||||||| |||||||||| ||||| ||||    |||||| |||||| |||||||||||||||||||||||||| | ||||||| ||||    
T  30299049 cctatgaagcacggacactcctcggattagacgtgtcccggca--cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagc 30298952  T
Q  417 tgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||| ||||||||||||||    
T  30298951 tgtgtcggcgtgtcagtgtccgtgtc 30298926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 318 - 442
Target Start/End: Complemental strand, 30327917 - 30327794
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttct-caaattactagc 416  Q
    ||||||||||||||||||| |||||||||| ||||| ||||    |||||| |||||| |||||||||||||||||||||||||| | ||||||| ||||    
T  30327917 cctatgaagcacggacactcctcggattagacgtgtcccggca--cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagc 30327820  T
Q  417 tgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||| ||||||||||||||    
T  30327819 tgtgtcggcgtgtcagtgtccgtgtc 30327794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 378 - 478
Target Start/End: Complemental strand, 36635368 - 36635268
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    ||||||||||||||||||| |||||||||||||| |||  |||| ||||| |||||||||| |||||||||||||||||| |||||||| ||||||||||    
T  36635368 taattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgtgtccttatccatgcttcata 36635269  T
Q  478 g 478  Q
    |    
T  36635268 g 36635268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 359 - 454
Target Start/End: Complemental strand, 21945566 - 21945471
Alignment:
Q  359 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||||| |||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| | |||||||| ||||| |||||||||||    
T  21945566 tgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtc 21945471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 319 - 478
Target Start/End: Original strand, 10499227 - 10499383
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 418  Q
    |||||||||||||||| | ||||||||||||||||  ||| |||||||||||||||   |||||||||| |||||||| |||||||||| ||  ||| ||    
T  10499227 ctatgaagcacggacaatcctcggattaggcgtgtgtcgg-gtccgacactgacacatataattacactaaattatgtgattttctcaagtt-ttagatg 10499324  T
Q  419 tgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 478  Q
    |||||| || |||||||| |||| ||||| |||||| |||||  |||| |||||||||||    
T  10499325 tgtcggtgtgtcagtgtcagtgt-gtgtctggtgtccgtatctgtatccatgcttcatag 10499383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 321 - 447
Target Start/End: Original strand, 22440559 - 22440684
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtg 420  Q
    |||||||||||||||| |||||||||||||||| |  ||||| ||||| | |||   ||||||||||||||||||| |||||||||||||| || | |||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacac-gtcacatataattacactgaattatgtgattttctcaaattattaacggtg 22440657  T
Q  421 tcggcgtatcagtgtccgtgtcgtgtc 447  Q
    |||  |||||||||||| |||||||||    
T  22440658 tcgatgtatcagtgtccatgtcgtgtc 22440684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 319 - 422
Target Start/End: Complemental strand, 37203371 - 37203264
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgt-----ccgacactgacactcgtaattacactgaattatgtcattttctcaaattact 413  Q
    ||||||||||||||||||||||||||||| ||||| |||||||     |||||||| ||||| ||||||||||| |||||||||||||| |||||||| |    
T  37203371 ctatgaagcacggacacttctcggattagacgtgtcccggtgtcggacccgacact-acacttgtaattacactaaattatgtcattttttcaaattatt 37203273  T
Q  414 agctgtgtc 422  Q
    ||| |||||    
T  37203272 agccgtgtc 37203264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 358 - 478
Target Start/End: Original strand, 12895269 - 12895389
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||| ||||||  |||||||||  |||||||| ||||| |||||||| ||  ||||||||||| ||| ||| |||||||| ||||||||| ||    
T  12895269 gtgtccgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtcgtatccggtgtccgt 12895368  T
Q  458 atccttatctatgcttcatag 478  Q
    |||| ||||| || |||||||    
T  12895369 atccgtatctgtgtttcatag 12895389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 371 - 479
Target Start/End: Complemental strand, 19482719 - 19482611
Alignment:
Q  371 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatg 470  Q
    ||||| |||||||||| ||||||||| || || |||||||| ||| ||||||||||| |||||||| |||||||||| ||||||||| | | ||||  ||    
T  19482719 acacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtgtctgtgttcgtatccgtg 19482620  T
Q  471 cttcatagg 479  Q
    |||||||||    
T  19482619 cttcatagg 19482611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 24343551 - 24343475
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||||||||||| |||||||||||||| || | |||||||||| || | |||||||||||||||||||||    
T  24343551 taattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtc 24343475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 358 - 449
Target Start/End: Complemental strand, 49431090 - 49430998
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttct-caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||||| ||||||  ||||||||||||||||||| ||||| | ||||||| ||||||||||||||| ||| |||||| ||||||||||    
T  49431090 gtgtccgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccgagtcgtgtccg 49430998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 358 - 449
Target Start/End: Original strand, 12797333 - 12797423
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||| | || |||||| |||||||||||||||| ||||    
T  12797333 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt-tcaaattattagttttgccggcgtgtcagtgtccgtgtcgtatccg 12797423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 318 - 478
Target Start/End: Complemental strand, 20633591 - 20633429
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacac-----tcgtaattacactgaattatgtcattttctcaaattac 412  Q
    ||||||||||||| ||||| || |||||||||||||   |||||||||||| |||||     | ||||||||| ||||||||||   ||| ||||||||     
T  20633591 cctatgaagcacgaacactccttggattaggcgtgtcttggtgtccgacaccgacacgacacttgtaattacattgaattatgt---tttttcaaattat 20633495  T
Q  413 tagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 478  Q
    |||| |||||| ||| ||||||||||| ||||||| |||||| || ||| ||||  ||||||||||    
T  20633494 tagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccgtgcttcatag 20633429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 363 - 449
Target Start/End: Original strand, 3947766 - 3947852
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||||||| ||||||||||||| | || ||||| |||| |||||||    
T  3947766 cgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcggcatgtccgtgtctgtgtggtgtccg 3947852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 363 - 460
Target Start/End: Complemental strand, 28084581 - 28084483
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttct-caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 460  Q
    |||||| |||||| ||||||||| |||||||||| ||||| | ||||||  ||||||||||||||| |||| ||| ||||||||||||||||| |||||    
T  28084581 cgacacagacacttgtaattacattgaattatgtgatttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtccgtatc 28084483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 385
Target Start/End: Complemental strand, 30094134 - 30094066
Alignment:
Q  317 ccctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattaca 385  Q
    ||||||| ||||||||||||  ||||||||||||||| |||||||||||||| |||||| |||||||||    
T  30094134 ccctatgtagcacggacactcttcggattaggcgtgtcccggtgtccgacaccgacacttgtaattaca 30094066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 454
Target Start/End: Original strand, 35157980 - 35158076
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||| ||||| ||||||  |||||||||| |||||||| |||||  ||||||| ||| || |||||||| ||||||||||||| ||||||||||||    
T  35157980 gtgtcagacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgtc 35158076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 318 - 436
Target Start/End: Original strand, 11596296 - 11596425
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacac-----------tcgtaattacactgaattatgtcattttctca 406  Q
    ||||||||||||||||||| ||| |||||||||||| ||| |||| |||| ||||||           | |||||||||||||||||||| ||||| |||    
T  11596296 cctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacaatgacacgacacctacacttgtaattacactgaattatgtgattttttca 11596395  T
Q  407 aattactagctgtgtcggcgtatcagtgtc 436  Q
    ||||| ||||| ||| ||||||||||||||    
T  11596396 aattattagctttgttggcgtatcagtgtc 11596425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 369 - 476
Target Start/End: Original strand, 14126117 - 14126224
Alignment:
Q  369 tgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatcta 468  Q
    |||||||  ||||||||||||||||||| | ||| |||||||| || | |||||||||| | |||||| |||||||||||  ||||||| ||  ||||||    
T  14126117 tgacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgtccactgtctgtgtctgtatcta 14126216  T
Q  469 tgcttcat 476  Q
    ||||||||    
T  14126217 tgcttcat 14126224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 364 - 450
Target Start/End: Complemental strand, 848009 - 847923
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccgg 450  Q
    ||||| |||||| ||||||| | |||||||||| |||||||||||||| |||| |  ||||||| |||||||| |||||||||||||    
T  848009 gacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccgg 847923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 449
Target Start/End: Complemental strand, 40481687 - 40481610
Alignment:
Q  371 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||| |||||||||||||||||||| ||||| |||||||| ||| ||| ||||||| |||||||| ||||||||||||    
T  40481687 acacttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccg 40481610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 448
Target Start/End: Original strand, 16303266 - 16303351
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 448  Q
    |||||| |||||| ||||||||||| |||||| ||||||| ||||| || || || ||||||||| ||||||||||| ||||||||    
T  16303266 cgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtccgtatcgtgtcc 16303351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 358 - 446
Target Start/End: Original strand, 2361970 - 2362058
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 446  Q
    ||||||||||| ||||||  |||||||||| |||||||| ||||| |||||||| |||||||||||| || ||| ||||  ||||||||    
T  2361970 gtgtccgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaatgtcaatgtcgtgt 2362058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 5414187 - 5414263
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||| ||| ||| ||||||| |||  | ||||||||||||||| || |||||||||||||||||||||||    
T  5414187 taattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtcgtgtccggtgtc 5414263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 383 - 447
Target Start/End: Complemental strand, 7012105 - 7012041
Alignment:
Q  383 acactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    ||||||||||||||||||||||||||||| || | |||||||||| || ||||||||||| ||||    
T  7012105 acactgaattatgtcattttctcaaattattatcggtgtcggcgtgtcggtgtccgtgtcctgtc 7012041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 320 - 411
Target Start/End: Original strand, 17425348 - 17425437
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    |||||||||| |||||| |||||||||||||||| |  ||||| ||||| ||||  | ||||||||||||||||||  ||||||||||||||    
T  17425348 tatgaagcacagacactcctcggattaggcgtgtccttgtgtctgacacagaca--cataattacactgaattatgcgattttctcaaatta 17425437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 358 - 422
Target Start/End: Original strand, 28964243 - 28964307
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||| ||||    
T  28964243 gtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattattagctatgtc 28964307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 435
Target Start/End: Original strand, 20743295 - 20743350
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgt 435  Q
    |||||||||||||||||||||||||||||||| || | |||||||||| |||||||    
T  20743295 attacactgaattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgt 20743350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 363 - 454
Target Start/End: Original strand, 27706177 - 27706268
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||| ||||| ||||||||||| |||||||| ||||| | |||||| ||  ||||||| ||| ||||||||| ||||||||| ||||||    
T  27706177 cgacactcacacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtctggtgtc 27706268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 449
Target Start/End: Original strand, 34306799 - 34306889
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||||| |||||| |||||||||||  ||||| | ||||| |||||||| ||| |||||||||||||||||||| || | |||||||    
T  34306799 gtgtccgacaccgacacttgtaattacactacattatctgatttt-tcaaattattagttgtgtcggcgtatcagtgtctgtattgtgtccg 34306889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 424
Target Start/End: Original strand, 38847010 - 38847073
Alignment:
Q  361 tccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    ||||||||||||||| ||||||||||||||| || | ||||| |||||||| ||||||||||||    
T  38847010 tccgacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtgtcgg 38847073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 424
Target Start/End: Original strand, 8423713 - 8423779
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    ||||||||||| |||| |  ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  8423713 gtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtcgg 8423779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 321 - 410
Target Start/End: Complemental strand, 16189813 - 16189721
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgttccgg---tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatt 410  Q
    |||||||| ||||||||||| |||||| | ||| ||||   |||||| ||| ||||| | ||||||||||||||||||| |||||||||||||    
T  16189813 atgaagcatggacacttctcagattagccatgtcccggctgtgtccgtcaccgacacacataattacactgaattatgtgattttctcaaatt 16189721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 319 - 361
Target Start/End: Original strand, 35157925 - 35157967
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgt 361  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  35157925 ctatgaagcacggacacttctcggattaagcgtgttccggtgt 35157967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 35161156 - 35161106
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  35161156 cctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacac 35161106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 427
Target Start/End: Original strand, 54580018 - 54580087
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    ||||||||||| ||||||  ||||||||||||||||||| ||||| |||||||| ||| |||||| ||||    
T  54580018 gtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgt 54580087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 439
Target Start/End: Complemental strand, 4383426 - 4383351
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 439  Q
    ||||||||||| | |||||||||||||||||||| ||||| |||||||| ||| ||| ||| ||| |||||||||||    
T  4383426 cgacactgacatttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcgacgtgtcagtgtccgt 4383351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 447
Target Start/End: Original strand, 11651142 - 11651218
Alignment:
Q  371 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    ||||| ||| || ||||||||||||| ||||| | |||||| ||||||||||| ||| ||||||||||| |||||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 11651218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 12708261 - 12708213
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||||    
T  12708261 ctatgaagcacggacgctcctcggattaggcgtgttccgatgtccgaca 12708213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 429
Target Start/End: Original strand, 4672104 - 4672151
Alignment:
Q  382 tacactgaattatgtcattttctcaaattactagctgtgtcggcgtat 429  Q
    ||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  4672104 tacactgaattatgtaattttcccaaattattagctgtgtcggcgtat 4672151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 454
Target Start/End: Original strand, 20521873 - 20521940
Alignment:
Q  387 tgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||||| ||||| |||||||| || | || ||||||| ||||||||||||||||||| ||||||    
T  20521873 tgaattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtctggtgtc 20521940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 421
Target Start/End: Complemental strand, 29205508 - 29205445
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgt 421  Q
    |||||| |||| |||||| |||||||||||||||||||| ||||| |||||||| |||| ||||    
T  29205508 gtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattagccgtgt 29205445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 449
Target Start/End: Original strand, 35723384 - 35723470
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtc-attttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||||||   |||||||| ||||||||||  |||||||||||||| |||| |||||||||| ||||||| | |||||||||||    
T  35723384 cgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgt-catgtcgtgtccg 35723470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 422
Target Start/End: Complemental strand, 51701317 - 51701258
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    ||||||| ||||| ||||||||||| |||||||| ||||| |||||||| ||||||||||    
T  51701317 cgacactaacacttgtaattacactcaattatgtaattttttcaaattattagctgtgtc 51701258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 18844423 - 18844457
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||||||||||||||||||||||    
T  18844423 ctatgaagcacggacacttctcggattaggcgtgt 18844457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 459
Target Start/End: Complemental strand, 28720916 - 28720840
Alignment:
Q  381 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtat 459  Q
    |||||||| ||||| | ||||| |||||||| ||||||||||||| | ||||||| |||||||||||| ||||||||||    
T  28720916 ttacactgcattatatgatttt-tcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgtcc-gtgtctgtat 28720840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 424
Target Start/End: Complemental strand, 32910595 - 32910549
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    |||||||||||||||||||||||||||||||||| || | |||||||    
T  32910595 taattacactgaattatgtcattttctcaaattattatccgtgtcgg 32910549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 427
Target Start/End: Complemental strand, 42640593 - 42640521
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtca---ttttctcaaattactagctgtgtcggcgt 427  Q
    ||||||||||| |||||| |||||||||||||||||||| |   |||| ||||||||  ||||||||||||||    
T  42640593 gtgtccgacaccgacacttgtaattacactgaattatgtgatttttttttcaaattatcagctgtgtcggcgt 42640521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 378 - 439
Target Start/End: Complemental strand, 903966 - 903905
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 439  Q
    ||||||||||||||||||| |||||||||||||| || | ||| ||| || |||||||||||    
T  903966 taattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgtccgt 903905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 30522933 - 30522994
Alignment:
Q  381 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    |||||||||||||||| |||||||||||| | |||| ||||  |||||||||| ||||||||    
T  30522933 ttacactgaattatgtgattttctcaaataattagcggtgtgagcgtatcagtatccgtgtc 30522994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 378 - 447
Target Start/End: Complemental strand, 30838254 - 30838185
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    |||||||||| |||||| | ||||| |||||||| |||| || ||| |||||||||||||||| ||||||    
T  30838254 taattacactaaattatataattttatcaaattattagcagtatcgacgtatcagtgtccgtgccgtgtc 30838185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 363 - 454
Target Start/End: Original strand, 30982878 - 30982966
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| ||||||  ||||||||||||| ||||| |||||||||||| | |||| ||   ||||| || ||||||||||||| |||||||||    
T  30982878 cgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggt---ggcgtgtctgtgtccgtgtcgtatccggtgtc 30982966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 378 - 427
Target Start/End: Complemental strand, 40613494 - 40613445
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    ||||||||||||||||||| ||||||||||| || |||| ||||||||||    
T  40613494 taattacactgaattatgtgattttctcaaaatattagcggtgtcggcgt 40613445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 715545 - 715593
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||||||||||||||||| |||||||||||||||| || ||||| ||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 715593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 752871 - 752919
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||||||||||||||||| |||||||||||||||| || ||||| ||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 752919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 358
Target Start/End: Original strand, 5775303 - 5775343
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccgg 358  Q
    ||||||||||||||||||| |||||||||||||||| ||||    
T  5775303 cctatgaagcacggacactcctcggattaggcgtgtcccgg 5775343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 8423658 - 8423706
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||||| ||||||||||||||| |||||||||||| |||||||| ||||    
T  8423658 ctatgacgcacggacacttctccgattaggcgtgtcccggtgtcggaca 8423706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 13783325 - 13783261
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||||||| ||| || ||||||||| | |||| ||||||| || ||||||||||||||    
T  13783325 taattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgtgtc 13783261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 16402226 - 16402302
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||| || |||| |||||||||||||| || | |||||||| | ||||||| | |||||||| |||||||    
T  16402226 taattacactgtatcatgttattttctcaaattattatccgtgtcggcatgtcagtgttcatgtcgtgtgcggtgtc 16402302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 40784073 - 40784029
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||    
T  40784073 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtc 40784029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 53381529 - 53381573
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||    
T  53381529 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtc 53381573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 461
Target Start/End: Original strand, 752941 - 753031
Alignment:
Q  371 acactcgtaattacactgaattatgtca-ttttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||| |||||||||||||||||||| | |||| | |||||| |||||||||||| || | || ||  ||||||||||| ||||||||||||    
T  752941 acacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttagagtatgtgtcgtgtcc-gtgtctgtatcc 753031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Original strand, 3064867 - 3064902
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgt 353  Q
    ||||||||||||||||||| ||||||||||||||||    
T  3064867 cctatgaagcacggacactcctcggattaggcgtgt 3064902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 437
Target Start/End: Complemental strand, 16073458 - 16073380
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtcc 437  Q
    ||||||||||| |||||| |||||||||||||||||||  ||||| |||||||| ||  ||||| ||||| |||| ||||    
T  16073458 gtgtccgacaccgacacttgtaattacactgaattatgcgatttt-tcaaattattacttgtgttggcgtgtcagagtcc 16073380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 423
Target Start/End: Original strand, 24613702 - 24613761
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcg 423  Q
    ||||| |||||| ||| ||||| |||||||||| |||||||||||||| ||| |||||||    
T  24613702 gacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtgtcg 24613761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 457
Target Start/End: Original strand, 26504314 - 26504393
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||||| ||| | ||||||| |||||| |||| ||||||  || |||||||||||||| | |||||| |||||    
T  26504314 taattacactgaactatttgattttcttaaattattagcagtgtcgatgtttcagtgtccgtgtcatatccggtatctgt 26504393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 411
Target Start/End: Original strand, 31243565 - 31243596
Alignment:
Q  380 attacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||||||||||||||||||||||||    
T  31243565 attacactgaattatgtcattttctcaaatta 31243596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 36635449 - 36635406
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtc 36635406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 3144587 - 3144621
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||||||||||||||||| ||||    
T  3144587 ctatgaagcacggacacttctcggattaggtgtgt 3144621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 4383484 - 4383443
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  4383484 tatgaagcacggacactcctcggattaggcgtg-tccggtgtc 4383443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 13307941 - 13307891
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaa 408  Q
    |||||||||||  ||||| || |||||| ||||||||||||||||||||||    
T  13307941 gtgtccgacaccaacacttgtgattacattgaattatgtcattttctcaaa 13307891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 351 - 408
Target Start/End: Complemental strand, 13484095 - 13484037
Alignment:
Q  351 tgttccggtgtccgacactgacactcgtaattaca-ctgaattatgtcattttctcaaa 408  Q
    |||||| |||||||||||||||||| || ||||||  |||||||||| |||||||||||    
T  13484095 tgttccagtgtccgacactgacacttgtgattacatttgaattatgttattttctcaaa 13484037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 436
Target Start/End: Complemental strand, 15029809 - 15029751
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    ||||||||||||||||||| || || |||||||| |||| ||||| |||| ||||||||    
T  15029809 taattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtc 15029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 18513174 - 18513224
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||||||| ||| |||||||||||| | |||||| |||||    
T  18513174 cctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacac 18513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 23292926 - 23292960
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||||| ||||||||||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgt 23292960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 447
Target Start/End: Original strand, 34515892 - 34515958
Alignment:
Q  381 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    ||||||||||||||||||||||||  ||||| || | |||||| ||| ||||||| ||||| |||||    
T  34515892 ttacactgaattatgtcattttcttgaattattatccgtgtcgacgtgtcagtgttcgtgttgtgtc 34515958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 424
Target Start/End: Complemental strand, 35161100 - 35161034
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    ||||||||| |||| |||  ||||||||||||||||||| |||||||  ||||| |||| |||||||    
T  35161100 gtgtccgactctgatacttataattacactgaattatgtgattttcttgaattagtagcagtgtcgg 35161034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 456
Target Start/End: Original strand, 40179631 - 40179729
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctg 456  Q
    ||||||||||| ||| |   ||||||||||||||||||| ||||| ||||| || ||   |||||  ||| |||||||||||||| ||| |||||||||    
T  40179631 gtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgtcatgttcggtgtctg 40179729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 427
Target Start/End: Complemental strand, 1747256 - 1747207
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    |||||| |||||||||||| |||||||||| ||| |||| ||||||||||    
T  1747256 taattaaactgaattatgtgattttctcaatttattagcggtgtcggcgt 1747207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 6879443 - 6879504
Alignment:
Q  342 gattaggcgtgttccg-gtgtccgacactgacactcgtaattacactgaattatgtcatttt 402  Q
    |||||||||||||  | ||||||||||| |||||| ||||||||||| |||||||| |||||    
T  6879443 gattaggcgtgttatgcgtgtccgacaccgacacttgtaattacacttaattatgtgatttt 6879504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 16184861 - 16184799
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||| ||||||||| ||| |||||||||||||| ||||   |||||||| ||||||||||||||    
T  16184861 taatttcactgaattgtgtgattttctcaaattattagc--ggtcggcgtgtcagtgtccgtgtc 16184799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 368
Target Start/End: Complemental strand, 16886726 - 16886677
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||| ||||||||||||||||  |||||| |||||||||||||| |||||    
T  16886726 ctatcaagcacggacacttctgagattagccgtgttccggtgtcggacac 16886677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 368
Target Start/End: Complemental strand, 24343632 - 24343583
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||| ||| || ||||||||| |||||||| |||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacac 24343583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 411
Target Start/End: Original strand, 26276024 - 26276057
Alignment:
Q  378 taattacactgaattatgtcattttctcaaatta 411  Q
    |||||||| |||||||||||||||||||||||||    
T  26276024 taattacattgaattatgtcattttctcaaatta 26276057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 411
Target Start/End: Original strand, 36386226 - 36386259
Alignment:
Q  378 taattacactgaattatgtcattttctcaaatta 411  Q
    |||||||||||||||||||| |||||||||||||    
T  36386226 taattacactgaattatgtccttttctcaaatta 36386259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 368
Target Start/End: Original strand, 3947702 - 3947750
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| |||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacac 3947750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 358 - 422
Target Start/End: Complemental strand, 4157213 - 4157150
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    ||||||||||| |||||| |||||| |||| |||||||| ||||| |||||||| ||| ||||||    
T  4157213 gtgtccgacaccgacacttgtaattgcactaaattatgtgatttt-tcaaattattagttgtgtc 4157150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 480
Target Start/End: Complemental strand, 12708192 - 12708088
Alignment:
Q  377 gtaattacactgaattatgtcattttct-caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttca 475  Q
    |||||||||||||||||| ||||||| |  |||||| ||| |||||| |||| |||||||| | |||||||| | |||| || ||| |||   |||||||    
T  12708192 gtaattacactgaattatttcattttttaaaaattattagttgtgtctgcgtgtcagtgtctgcgtcgtgtctgatgtccgtgtccgtattcgtgcttca 12708093  T
Q  476 tagga 480  Q
    |||||    
T  12708092 tagga 12708088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 13117502 - 13117446
Alignment:
Q  349 cgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctc 405  Q
    ||||| || ||||||||||| |||||| || |||||| |||||| ||||||||||||    
T  13117502 cgtgtcccagtgtccgacaccgacacttgtgattacattgaattttgtcattttctc 13117446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 28084640 - 28084600
Alignment:
Q  322 tgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||| |||||||||||||||| || |||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtc 28084600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 29205587 - 29205539
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||||||||||| ||||| |||||||||||||||| || ||||| ||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggaca 29205539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 368
Target Start/End: Original strand, 30982808 - 30982856
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||  | ||||||||||||| |||||||| |||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacac 30982856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 423
Target Start/End: Original strand, 38148741 - 38148785
Alignment:
Q  379 aattacactgaattatgtcattttctcaaattactagctgtgtcg 423  Q
    |||||||||||||||||| ||||||||||| || |||| ||||||    
T  38148741 aattacactgaattatgtgattttctcaaactattagcggtgtcg 38148785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 40742635 - 40742559
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||  ||||| | |||||||||||||| ||   |||||||||| ||| |||||||||||| ||| |||||    
T  40742635 taattacactagattatatgattttctcaaattattaatggtgtcggcgtttcaatgtccgtgtcgtatccagtgtc 40742559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 422
Target Start/End: Complemental strand, 56257977 - 56257933
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    ||||||||||||||||| | |||||||||||||| |||| |||||    
T  56257977 taattacactgaattatatgattttctcaaattattagcagtgtc 56257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 318 - 460
Target Start/End: Complemental strand, 20280 - 20134
Alignment:
Q  318 cctatgaagcacggac---acttctcggattaggcgtgttccggtgtc-cgacactgacactcgtaattacactgaattatgtcattttctcaaattact 413  Q
    ||||||||||||||||   ||| |||||||||||||||| ||   | | ||||||||||||| |||||||||||||||||||| ||||| |||||||| |    
T  20280 cctatgaagcacggactgtactcctcggattaggcgtgtcccaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattatt 20181  T
Q  414 agctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 460  Q
    |||||||||||||| ||| |||||||||||||||||||||| |||||    
T  20180 agctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatc 20134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 358 - 479
Target Start/End: Complemental strand, 8862 - 8741
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||| |||||| ||||||||||| ||| || | ||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||| ||    
T  8862 gtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 8763  T
Q  458 atccttatctatgcttcatagg 479  Q
     ||| |||| ||||||||||||    
T  8762 gtccgtatccatgcttcatagg 8741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 90)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 363 - 461
Target Start/End: Complemental strand, 27945100 - 27945002
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    |||||| |||||| |||||||||||||||||||| |||||||||||||| |||  |||||||||| |||||||||||||||||||||||||| ||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatcc 27945002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 28155673 - 28155565
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 418  Q
    |||||||||||||||| | || ||||||||||||| | |||||||||||| |||||| |||||||||| ||||||||| |||||||||||||| |||| |    
T  28155673 ctatgaagcacggacattccttggattaggcgtgtcctggtgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcgg 28155574  T
Q  419 tgtcggcgt 427  Q
    |||||||||    
T  28155573 tgtcggcgt 28155565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 466
Target Start/End: Complemental strand, 24339701 - 24339598
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 462  Q
    |||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||| ||||| |||||||||||||||| ||||||     
T  24339701 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccggtgtccgtatccg 24339602  T
Q  463 tatc 466  Q
    ||||    
T  24339601 tatc 24339598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 370 - 454
Target Start/End: Complemental strand, 13770743 - 13770659
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| |||||||||||||||||||| ||||| | |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  13770743 gacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtccgatgtc 13770659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 30813916 - 30813788
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactga-cactcgtaattacactgaattatgtcattttctcaaattactagct 417  Q
    |||||||||||||||||| |||||||||||||||||| | |||| |||||  | |||  |||||||||||||||||||| |||||||||||||| ||||     
T  30813916 ctatgaagcacggacactcctcggattaggcgtgttctgatgtcggacacgcaacacctgtaattacactgaattatgtaattttctcaaattattagca 30813817  T
Q  418 gtgtcggcgtatcagtgtccgtgtcgtgt 446  Q
     |||||| ||||||||||| || ||||||    
T  30813816 atgtcggagtatcagtgtctgtctcgtgt 30813788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 358 - 454
Target Start/End: Complemental strand, 25481966 - 25481870
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||||||  ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||| ||||| ||| ||||||| ||||    
T  25481966 gtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtc 25481870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 43250037 - 43249961
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||| |||||||||||||||||||||| || | |||||||||| |||||||||||||| |||||||||||    
T  43250037 taattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtc 43249961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 478
Target Start/End: Original strand, 5409836 - 5409951
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 462  Q
    |||||| |||||| |||||| ||||||||||||| ||||| |||||||| ||||||| || |||| ||||||||| |||||| |||||||||||| ||      
T  5409836 cgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtccatgtcgtatccggtgtctgtgtctg 5409935  T
Q  463 tatctatgcttcatag 478  Q
    ||||  ||||||||||    
T  5409936 tatccgtgcttcatag 5409951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 370 - 449
Target Start/End: Complemental strand, 24105730 - 24105651
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||||| ||||||||||||||| |||  ||||| |||||||| ||||||||||||||| |||||||||||||||||||||    
T  24105730 gacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 24105651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 26733368 - 26733265
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||| |||||   |||||| |||||||||||| ||||| |||||||| |||| |||||| ||| ||||||||||||||||||| |||||| ||    
T  26733368 gtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgtcggt 26733269  T
Q  458 atcc 461  Q
    ||||    
T  26733268 atcc 26733265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 358 - 476
Target Start/End: Original strand, 11061071 - 11061189
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||| ||||| |||||| ||||||| ||| |||||||| ||||| |||||||| |||||||||||| || |||||||||||||||| |||| |||| ||    
T  11061071 gtgtctgacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgtccgt 11061170  T
Q  458 atccttatctatgcttcat 476  Q
     ||| ||||  ||||||||    
T  11061171 gtccgtatccgtgcttcat 11061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 326 - 442
Target Start/End: Original strand, 18215144 - 18215265
Alignment:
Q  326 gcacggacacttctcggattaggcgtgttccggtgtc-----cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtg 420  Q
    ||||||||||| ||| |||||||||||| ||||||||     |||||| |||||| |||| ||||||| ||||||| ||||| |||||||| |||||| |    
T  18215144 gcacggacactcctcagattaggcgtgtcccggtgtcggacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcg 18215243  T
Q  421 tcggcgtatcagtgtccgtgtc 442  Q
    ||||||| | ||||||||||||    
T  18215244 tcggcgtgttagtgtccgtgtc 18215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 23191960 - 23191879
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 439  Q
    ||||| |||||||| ||  |||||||||||||| ||||| |||||||||||||| |||| ||||||||||||||||||||||    
T  23191960 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 363 - 454
Target Start/End: Original strand, 43027469 - 43027560
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| |||||| ||| |||||||| ||||||| ||||| |||||||| |||||| |||| ||| |||||||||||||||||||| |||||    
T  43027469 cgacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtc 43027560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 378 - 457
Target Start/End: Original strand, 18233613 - 18233694
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagc--tgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||| | |||||||| || ||||| ||||||||||||||    
T  18233613 taattacactgaattatgtcattttctcaaattactatctgtgtgtctgtgtatcagtatcagtgtcatgtccggtgtctgt 18233694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 318 - 427
Target Start/End: Complemental strand, 35862071 - 35861959
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc---cgacactgacactcgtaattacactgaattatgtcattttctcaaattacta 414  Q
    ||||||||||||||||||| |||||||||||||||| |  |||||   |||||| ||||||   ||||||| |||||||||| ||||| |||||||| ||    
T  35862071 cctatgaagcacggacactcctcggattaggcgtgtcctcgtgtccgacgacacagacacttacaattacattgaattatgtgattttttcaaattatta 35861972  T
Q  415 gctgtgtcggcgt 427  Q
    | |||||||||||    
T  35861971 gttgtgtcggcgt 35861959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 386 - 451
Target Start/End: Original strand, 11722121 - 11722186
Alignment:
Q  386 ctgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggt 451  Q
    ||||||||||| |||||||||||||  |||| |||||||||| |||||||||||||||||||||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggt 11722186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 479
Target Start/End: Complemental strand, 30731080 - 30730980
Alignment:
Q  379 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 478  Q
    |||||||||||||||||| |||||||||||||| | || ||||||||||  || |||  |||||||||| |||||| || ||| ||||| ||||||||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgtctggtgtccgtgtccgtatctgtgcttcatag 30730981  T
Q  479 g 479  Q
    |    
T  30730980 g 30730980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 479
Target Start/End: Original strand, 18213028 - 18213150
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattact-agctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctg 456  Q
    ||||||||||| |||||   |||||||||| |||||||| ||||||| |||  | | || ||||||||||||||||||||||||||||||| |||||  |    
T  18213028 gtgtccgacaccgacacatataattacactaaattatgtgattttctaaaaaaaattagttgtgtcggcgtatcagtgtccgtgtcgtgtctggtgttcg 18213127  T
Q  457 tatccttatctatgcttcatagg 479  Q
    | | | ||||| |||||||||||    
T  18213128 tgttcgtatctgtgcttcatagg 18213150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 416
Target Start/End: Complemental strand, 21880216 - 21880158
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagc 416  Q
    ||||||||||| |||||| |||||||||||||||||||| |||||||||||||| ||||    
T  21880216 gtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagc 21880158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 437
Target Start/End: Complemental strand, 32308163 - 32308105
Alignment:
Q  379 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtcc 437  Q
    |||||||||||||||||| |||||||||||||| |||| |||||||||| |||||||||    
T  32308163 aattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtcc 32308105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 368
Target Start/End: Complemental strand, 598327 - 598278
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 598278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 457
Target Start/End: Original strand, 4017811 - 4017888
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    |||||||| |||||| || ||||||||||||| || | |||||||||| || ||||||||||||||||| ||||||||    
T  4017811 attacactaaattatatcgttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtccagtgtctgt 4017888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 320 - 439
Target Start/End: Complemental strand, 9483040 - 9482917
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtc-----cgacactgacactcgtaattacactgaattatgtcattttctcaaattacta 414  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||     |||||| |||||   ||||||||||||||| ||| ||||||||||||||  |    
T  9483040 tatgaagcacggacacttctcgtattag-cgtgtcccggtgtcgcgtccgacaccgacacatataattacactgaattgtgtgattttctcaaattatca 9482942  T
Q  415 gctgtgtcggcgtatcagtgtccgt 439  Q
    ||  |||||| || |||||||||||    
T  9482941 gcgatgtcggtgtgtcagtgtccgt 9482917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 22868086 - 22868015
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||||||||||||| ||||||||| |||| |||  |||||||||| |||||||| |||| |||||||    
T  22868086 taattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgttgtgtccg 22868015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 457
Target Start/End: Original strand, 29763129 - 29763268
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac-tgacactcgtaattacactgaattatgtcattttctcaaattactagct 417  Q
    |||||||||||||||||| |||||||||||||||| | | |||| ||||| || |    |||| |||||| |||||||| ||||| ||||||||  || |    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgtgtaactacacttaattatgtgattttttcaaattataagtt 29763228  T
Q  418 gtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    |||| || || ||||||||  |||||||| ||||||||||    
T  29763229 gtgttggtgtgtcagtgtctatgtcgtgttcggtgtctgt 29763268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 441
Target Start/End: Original strand, 29787384 - 29787447
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgt 441  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||| | | |||||||||    
T  29787384 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccgtgt 29787447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 33994276 - 33994173
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||| ||||| |||||| |||||| ||||||||||||| |  || |||||||| ||| || |||||||| ||||||| |||||||||||  ||||| ||    
T  33994276 gtgtctgacaccgacacttgtaattgcactgaattatgtgaccttttcaaattagtagttgcgtcggcgtgtcagtgttcgtgtcgtgtcaagtgtccgt 33994177  T
Q  458 atcc 461  Q
    ||||    
T  33994176 atcc 33994173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 378 - 480
Target Start/End: Complemental strand, 5236030 - 5235928
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    |||||||||| |||||| | ||||||| |||||| |||| |||||| ||| |||||||| |||||||||||  |||| ||||   ||||| |||||||||    
T  5236030 taattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtccaatgtccgtatttgtatctgtgcttcata 5235931  T
Q  478 gga 480  Q
    |||    
T  5235930 gga 5235928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 378 - 436
Target Start/End: Complemental strand, 5835291 - 5835233
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    ||||||||||||||||||| ||||||||||| || |||  |||||||||||||||||||    
T  5835291 taattacactgaattatgttattttctcaaactattagtggtgtcggcgtatcagtgtc 5835233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 478
Target Start/End: Complemental strand, 9778559 - 9778452
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 462  Q
    |||||| |||||| ||||||| |||||||||||| ||||| ||||||||  |||||||        |||||||||||||||||||||||||| || |||     
T  9778559 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattatcagctgtg--------tcagtgtccgtgtcgtgtccggtgtccgtgtccg 9778468  T
Q  463 tatctatgcttcatag 478  Q
    ||||  ||||||||||    
T  9778467 tatccgtgcttcatag 9778452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 379 - 441
Target Start/End: Original strand, 21828421 - 21828483
Alignment:
Q  379 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgt 441  Q
    ||||||| || ||||||| ||||||||||||||||| | |||||||||| |||||||||||||    
T  21828421 aattacaatggattatgtgattttctcaaattactaacggtgtcggcgtgtcagtgtccgtgt 21828483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 21864872 - 21864767
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttct--caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtct 455  Q
    ||||||||||  |||||| ||||||||||| |||||| | ||||| |  ||||||| |||||||||| | || || |||||||||||||||||| ||| |    
T  21864872 gtgtccgacagcgacacttgtaattacactaaattatatgattttttttcaaattattagctgtgtccgtgtgtccgtgtccgtgtcgtgtccgatgtgt 21864773  T
Q  456 gtatcc 461  Q
    ||||||    
T  21864772 gtatcc 21864767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 479
Target Start/End: Complemental strand, 1433498 - 1433397
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    |||||||||  ||| |||| |||||||||||||| || | |||||||||| ||| |||||||||||||| ||||||| ||  || ||||  |||||||||    
T  1433498 taattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgtgcccgtatccgtgcttcata 1433399  T
Q  478 gg 479  Q
    ||    
T  1433398 gg 1433397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 447
Target Start/End: Complemental strand, 19206094 - 19206025
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    |||||| | |||||||||| |||||||||||||| |||| |||||||||| |  ||||||||||||||||    
T  19206094 taattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 422
Target Start/End: Complemental strand, 19213912 - 19213803
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcg---tgttccggt---gtccgacactgacactcgtaattacactgaattatgtcattttctcaaattac 412  Q
    |||||||||||||||||| |||||||||||||   ||| |||||   ||||||||| |||||| ||| |||||||| ||||||| ||||| | ||||||     
T  19213912 ctatgaagcacggacactcctcggattaggcggcgtgtcccggtcgtgtccgacaccgacacttgtatttacactgcattatgtgattttttaaaattat 19213813  T
Q  413 tagctgtgtc 422  Q
    |||| |||||    
T  19213812 tagcagtgtc 19213803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 435
Target Start/End: Complemental strand, 20549855 - 20549778
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgt 435  Q
    ||||||||||| |||||   |||||||||||||||| || |||||||||||||| |||| ||||||| || |||||||    
T  20549855 gtgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgt 20549778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 460
Target Start/End: Original strand, 2425754 - 2425830
Alignment:
Q  384 cactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 460  Q
    |||| |||||||| |||||||||||||| || | ||| |||||| ||||| || ||||||||||| |||||||||||    
T  2425754 cacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtccagtgtctgtatc 2425830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 5409770 - 5409814
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||    
T  5409770 cctatgaagcacggacactcctcggattaggcgtgtcccggtgtc 5409814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 442
Target Start/End: Complemental strand, 15680873 - 15680789
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||| ||||||  |||||||||| |||||||| ||||| |  ||||| ||||| ||||||||| ||||||||| ||||    
T  15680873 gtgtccgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagtgtccatgtc 15680789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 21880271 - 21880223
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    ||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggaca 21880223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 26329397 - 26329473
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||||||| |||  ||||||||||||| || |  ||||||||| |||||||| ||||||||||| |||||    
T  26329397 taattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtc 26329473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 374
Target Start/End: Complemental strand, 6490835 - 6490780
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacac 374  Q
    |||||||||||||||||| ||||||||| |||||| |||||||| ||||| |||||    
T  6490835 ctatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacaccgacac 6490780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 441
Target Start/End: Original strand, 7197292 - 7197375
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgt 441  Q
    ||||||||||| |||||| ||||||||| |||||||  | ||||| | |||||| ||||||||||||||| ||| |||| ||||    
T  7197292 gtgtccgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtcaatgtctgtgt 7197375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 461
Target Start/End: Original strand, 7328706 - 7328789
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    |||||||||| |||||||| |||||||||||||| |||| || ||| ||| | | |||| ||||||||| ||||||| ||||||    
T  7328706 taattacactaaattatgttattttctcaaattattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtatcc 7328789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 422
Target Start/End: Complemental strand, 19992060 - 19992001
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    |||||| ||||||  ||||||||||||| ||||| |||||||||||||| ||||||||||    
T  19992060 cgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 423
Target Start/End: Complemental strand, 23930261 - 23930218
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcg 423  Q
    ||||||||||||||||||||||||||||||||||| | ||||||    
T  23930261 attacactgaattatgtcattttctcaaattactatccgtgtcg 23930218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 424
Target Start/End: Complemental strand, 3991432 - 3991322
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc-----cgacactgacactcgtaattacactgaattatgtcattttctcaaattact 413  Q
    ||||||||| |||||||| |||||||||||||||| || ||        |||||| |||||| ||||||| |||||||||||| ||||| |||||||| |    
T  3991432 ctatgaagcccggacactcctcggattaggcgtgtcccagtcgatacgacgacaccgacacttgtaattatactgaattatgtgattttttcaaattatt 3991333  T
Q  414 agctgtgtcgg 424  Q
    || ||||||||    
T  3991332 agttgtgtcgg 3991322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 424
Target Start/End: Complemental strand, 8234210 - 8234144
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    ||||||||||| | |||| |||| ||||||||||||||| ||||| |||||||| ||| ||||||||    
T  8234210 gtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtcgg 8234144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 448
Target Start/End: Original strand, 8842354 - 8842420
Alignment:
Q  382 tacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 448  Q
    ||||| |||| |||| |||||||||||||  |||| ||||||| |||| ||||||||||||||||||    
T  8842354 tacacagaatcatgtgattttctcaaattcttagcagtgtcggtgtattagtgtccgtgtcgtgtcc 8842420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 9778625 - 9778575
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||||||| || ||||||||||||| |||||||| |||||    
T  9778625 cctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacac 9778575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 29812598 - 29812632
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||||||||||||||||||||||    
T  29812598 ctatgaagcacggacacttctcggattaggcgtgt 29812632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 363 - 436
Target Start/End: Original strand, 9408334 - 9408407
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    |||||| |||||| ||||||||||| |||||||| ||||| |||||||| ||  |||||||| || ||||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtc 9408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 363 - 444
Target Start/End: Complemental strand, 10042996 - 10042915
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgt 444  Q
    |||||||||||||  ||||||| || |||||||| | ||| |||||||| |||  |||||||||| | ||||||||||||||    
T  10042996 cgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtcgt 10042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 378 - 443
Target Start/End: Complemental strand, 22484069 - 22484004
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcg 443  Q
    |||||| |||||||||||  ||||||| |||||| |||| |||||||||| |||||||| ||||||    
T  22484069 taattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtcg 22484004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 320 - 369
Target Start/End: Original strand, 32287404 - 32287453
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacact 369  Q
    ||||||||||||||||| ||||||||||| |||| |||||||| ||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacact 32287453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 43027404 - 43027453
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||||||  ||||||||||||||| |||||||| |||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacac 43027453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 7133295 - 7133339
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    ||||||||||||||||||||||||||||||||  | |||||||||    
T  7133295 attacactgaattatgtcattttctcaaattatcatctgtgtcgg 7133339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 411
Target Start/End: Original strand, 10230024 - 10230121
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacac----tc-gtaattacactgaattatgtcattttctcaaatta 411  Q
    |||||||||||||| ||| || |||| |||||||||| ||||||||||||  ||||    ||  || ||||||||||||||||||||| |||||||||    
T  10230024 ctatgaagcacggaaactccttggatcaggcgtgttctggtgtccgacaccaacacgacatctatacttacactgaattatgtcatttcctcaaatta 10230121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 17851475 - 17851399
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||||||||||| ||||||| |||||| |||| || |||  || || || ||| ||||||||||||||||    
T  17851475 taattacactgaattatgtgattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtc 17851399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 446
Target Start/End: Original strand, 22602725 - 22602793
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 446  Q
    ||||||||||||||||||| |||||||||||| | |  | |||||||||| |||||| | |||||||||    
T  22602725 taattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtcgtgt 22602793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 418
Target Start/End: Original strand, 26033468 - 26033516
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctg 418  Q
    |||||| |||||||||||||||||||| ||||| |||||||| ||||||    
T  26033468 gacacttgtaattacactgaattatgtgattttttcaaattattagctg 26033516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 457
Target Start/End: Complemental strand, 12278899 - 12278794
Alignment:
Q  357 ggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagc------tgtgtcggcgtatcagtgtccgtgtcgtgtccgg 450  Q
    |||||||||||| |||||   ||||||||||||||||||||||||||| |||||| || |       |||| ||| | |||||||||||||||||||||     
T  12278899 ggtgtccgacac-gacacatataattacactgaattatgtcattttcttaaattattatcagtgttggtgttggcttgtcagtgtccgtgtcgtgtccga 12278801  T
Q  451 tgtctgt 457  Q
    |||||||    
T  12278800 tgtctgt 12278794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 454
Target Start/End: Original strand, 13557750 - 13557835
Alignment:
Q  372 cactcgtaattacactgaattatgtcattttctc---aaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||| |||||||||||||||||||| ||||| |    |||||| ||| | ||||||||| |||||||| ||||| |||||||||||    
T  13557750 cacttgtaattacactgaattatgtgattttttttttaaattattagttttgtcggcgtgtcagtgtctgtgtcatgtccggtgtc 13557835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 15902866 - 15902795
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||||||||| |||||||| ||||| |||||||| ||   |||||||| | |||||||| ||||||||||||    
T  15902866 taattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtccg 15902795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 24339772 - 24339729
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||| |||| |||||||||||||||| ||||||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtc 24339729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 454
Target Start/End: Original strand, 36297369 - 36297435
Alignment:
Q  387 tgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||||| ||||||| |||||| |||| ||||||  || ||| ||||||||||||||||||||||    
T  36297369 tgaattatgtgattttcttaaattattagccgtgtcga-gtgtcaatgtccgtgtcgtgtccggtgtc 36297435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 440
Target Start/End: Complemental strand, 1401069 - 1401007
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtg 440  Q
    ||||||||||||||||||| | |||||||||||| ||||  | || |||| ||||||||||||    
T  1401069 taattacactgaattatgtgagtttctcaaattattagcgatatcagcgtgtcagtgtccgtg 1401007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 2424658 - 2424620
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagc 416  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  2424658 taattacactgaattatgtgattttctcaaattattagc 2424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 425
Target Start/End: Complemental strand, 5548735 - 5548673
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggc 425  Q
    ||||||||||||   ||||||||||||||||| | ||||||||||||||  ||| ||||||||    
T  5548735 cgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcggc 5548673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 408
Target Start/End: Original strand, 5937420 - 5937466
Alignment:
Q  362 ccgacactgacactcgtaattacactgaattatgtcattttctcaaa 408  Q
    ||||||| |||||| || |||||| ||||||||||||||||||||||    
T  5937420 ccgacacagacacttgtgattacattgaattatgtcattttctcaaa 5937466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 436
Target Start/End: Original strand, 6630927 - 6630985
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    |||||||||||||||| || | |||||||||||| |||  |||||||||| ||||||||    
T  6630927 taattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 434
Target Start/End: Original strand, 11272586 - 11272659
Alignment:
Q  363 cgacactgacactcgtaattacactgaat--tatgtcattttctcaaattactagctgtgtcggcgtatcagtg 434  Q
    |||||| |||||| |||||||||||||||  ||||| ||||| ||||||||  || ||||||||||| ||||||    
T  11272586 cgacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtcggcgtctcagtg 11272659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 447
Target Start/End: Complemental strand, 12289158 - 12289088
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgt-gtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    ||||| ||||||||||||| |||||||||||||| |||| || | |||||| || |||||||||| |||||    
T  12289158 taattccactgaattatgtgattttctcaaattattagcagtggccggcgtgtcggtgtccgtgttgtgtc 12289088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 362
Target Start/End: Complemental strand, 13770810 - 13770772
Alignment:
Q  324 aagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtc 13770772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 476
Target Start/End: Original strand, 21140997 - 21141095
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcat 476  Q
    |||| |||||||||||| | ||||||| |||||| |||  |||||| ||| || | ||||||||||||| ||||||| || ||| ||||  ||||||||    
T  21140997 taatcacactgaattatatgattttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgtacggtgtccgtgtccgtatccgtgcttcat 21141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 448
Target Start/End: Complemental strand, 49107864 - 49107795
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 448  Q
    |||| ||||| ||||||||  ||||||||||||| |||| ||||||| || |||| |||||||||||||||    
T  49107864 taatcacactcaattatgtg-ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 368
Target Start/End: Complemental strand, 1433578 - 1433529
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||| |||||||||| ||||| | |||||| |||||    
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacac 1433529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 411
Target Start/End: Complemental strand, 4909215 - 4909162
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    |||||||||||||||||   | |||||| |||||||||| ||||||||||||||    
T  4909215 gtgtccgacactgacacatatgattacaatgaattatgtaattttctcaaatta 4909162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 411
Target Start/End: Complemental strand, 17307937 - 17307904
Alignment:
Q  378 taattacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||||||||||| ||||||||||||||    
T  17307937 taattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 444
Target Start/End: Original strand, 18013074 - 18013155
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgt 444  Q
    ||||||||||||   ||||||||||||||||||| ||||| | |||||| |||  ||||| |  | ||||||||||||||||    
T  18013074 cgacactgacacatataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgtgtcgt 18013155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 18035806 - 18035843
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccg 357  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  18035806 tatgaagcacggacactcctcggattagacgtgttccg 18035843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 403
Target Start/End: Complemental strand, 25956509 - 25956464
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttc 403  Q
    ||||||||||| |||||| || |||||| |||||||||||||||||    
T  25956509 gtgtccgacaccgacacttgtgattacattgaattatgtcattttc 25956464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 414
Target Start/End: Complemental strand, 37776039 - 37775990
Alignment:
Q  365 acactgacactcgtaattacactgaattatgtcattttctcaaattacta 414  Q
    ||||||||||  || |||||| | ||||||||||||||||||||||||||    
T  37776039 acactgacacatgtgattacatttaattatgtcattttctcaaattacta 37775990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 358 - 454
Target Start/End: Complemental strand, 598272 - 598176
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||| ||||| ||||||   ||||||| | ||||| || ||||||| |||||| |||| ||||||  || |||||||||||||| |||| ||||||    
T  598272 gtgtctgacaccgacacttacaattacatttaattacgtgattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtctggtgtc 598176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 8842282 - 8842322
Alignment:
Q  322 tgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||| || ||||||||||||| ||||||||    
T  8842282 tgaagcacggacactccttggattaggcgtgtcccggtgtc 8842322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 411
Target Start/End: Original strand, 12843175 - 12843223
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||||  ||||||||| |||||||||| ||||| ||||||||    
T  12843175 cgacactgacacatgtaattacattgaattatgtaattttatcaaatta 12843223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 24289859 - 24289815
Alignment:
Q  383 acactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    |||||||||||||| |||||||||||||| | || ||||||||||    
T  24289859 acactgaattatgtaattttctcaaattattggcggtgtcggcgt 24289815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 427
Target Start/End: Complemental strand, 25822714 - 25822650
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    |||||| |||||| |||||||||||||||| ||   |||| |||||||| ||| |||||||||||    
T  25822714 cgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtgtcggcgt 25822650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 323 - 367
Target Start/End: Original strand, 40287306 - 40287350
Alignment:
Q  323 gaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||||||||||||| |||||||||||| ||| |||||||| ||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggaca 40287350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 2e-29; HSPs: 106)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 358 - 460
Target Start/End: Complemental strand, 55401139 - 55401037
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||| |||||| ||||||||||| |||||||| ||||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||| ||    
T  55401139 gtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgt 55401040  T
Q  458 atc 460  Q
    |||    
T  55401039 atc 55401037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 359 - 460
Target Start/End: Original strand, 8587017 - 8587118
Alignment:
Q  359 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgta 458  Q
    |||||||||| |||||| ||||||||||| |||||||| ||||| |||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||    
T  8587017 tgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgta 8587116  T
Q  459 tc 460  Q
    ||    
T  8587117 tc 8587118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 345 - 444
Target Start/End: Original strand, 10268468 - 10268567
Alignment:
Q  345 taggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgt 444  Q
    |||||||||||||||||| |||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||||| ||||||||| ||||||    
T  10268468 taggcgtgttccggtgtctgacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgt 10268567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 358 - 454
Target Start/End: Original strand, 24205037 - 24205132
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||| ||||||  ||||||||||| |||||||||||||||||||||| || | |||||||||| ||||||||||||||||||||||||||    
T  24205037 gtgtccgacac-gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 24205132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 363 - 454
Target Start/End: Complemental strand, 28918060 - 28917969
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||| ||||||||| ||||| ||||||||||||||||||||    
T  28918060 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtc 28917969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 358 - 479
Target Start/End: Complemental strand, 7171565 - 7171445
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    |||||||||||  ||||| |||||||||| ||||||| | ||||| ||||||||| |||||||||||| | ||||| |||||||||||||||||||||||    
T  7171565 gtgtccgacaccaacacttgtaattacaccgaattatatgatttt-tcaaattacaagctgtgtcggcatgtcagtatccgtgtcgtgtccggtgtctgt 7171467  T
Q  458 atccttatctatgcttcatagg 479  Q
     ||| ||||  |||||||||||    
T  7171466 gtccgtatccgtgcttcatagg 7171445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 358 - 454
Target Start/End: Complemental strand, 8383321 - 8383225
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||| ||||||  ||||||||||||||||| | |||||||||||||| |||| |||||||||| ||| |||||||||||||||| |||||    
T  8383321 gtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtc 8383225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 363 - 478
Target Start/End: Original strand, 15796294 - 15796409
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 462  Q
    |||||| |||| | |||||||||||||||||| | ||||| |||||||| || |||||||||||| ||| |||||||||||||||||||||| || |||     
T  15796294 cgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtcca 15796393  T
Q  463 tatctatgcttcatag 478  Q
    ||||  ||||||||||    
T  15796394 tatccgtgcttcatag 15796409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 358 - 477
Target Start/End: Original strand, 16000011 - 16000130
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||| |||||| ||| |||||||||||||||| ||||| | |||||| ||| ||||||||||| |||||||| ||||||||| ||||||| ||    
T  16000011 gtgtccgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgt 16000110  T
Q  458 atccttatctatgcttcata 477  Q
     ||| ||||  |||||||||    
T  16000111 gtccgtatccgtgcttcata 16000130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 358 - 479
Target Start/End: Original strand, 35994734 - 35994853
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||| | ||| ||||| ||||||||||||||||  |    
T  35994734 gtgtccgacac-gacacttgtaattacactgaattatgtgatttt-tcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtccat 35994831  T
Q  458 atccttatctatgcttcatagg 479  Q
     ||| ||||  |||||||||||    
T  35994832 gtccgtatccgtgcttcatagg 35994853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 358 - 449
Target Start/End: Original strand, 26492200 - 26492291
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||||| || ||| |||||||||||||||| | | ||||| |||||||| ||||| ||||||||| |||||||||||||||||||||    
T  26492200 gtgtccgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 454
Target Start/End: Original strand, 10335244 - 10335377
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagct 417  Q
    |||| |||||||| ||||| |||  |||||||||||    ||| ||||||| |||||| ||| ||||||| || ||||| | ||| |||||||| ||| |    
T  10335244 cctacgaagcacgaacactcctccaattaggcgtgtc---gtgcccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagtt 10335340  T
Q  418 gtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||||| ||||||||||||||||||||||||||    
T  10335341 gtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 10335377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 362 - 479
Target Start/End: Complemental strand, 21479178 - 21479067
Alignment:
Q  362 ccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||||| |||||| |||||||||||||||| ||| ||||| |||||||| |||||||||||||      ||||| ||||||||||||||||| || |||    
T  21479178 ccgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggc------gtgtcagtgtcgtgtccggtgtccgtgtcc 21479085  T
Q  462 ttatctatgcttcatagg 479  Q
     |||| ||||||||||||    
T  21479084 gtatccatgcttcatagg 21479067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 370 - 454
Target Start/End: Original strand, 4990974 - 4991058
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| |||||||||||||||||||| ||||||||||| || |||| ||||||| || ||||| |||||||||||| |||||||    
T  4990974 gacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtc 4991058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 358 - 442
Target Start/End: Complemental strand, 10955016 - 10954932
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||| |||||| || ||||||||||||||||| ||||| |||||||| ||| ||||||||||| ||||||| ||||||    
T  10955016 gtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcgtgtc 10954932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 319 - 447
Target Start/End: Complemental strand, 11610628 - 11610496
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac----tgacactcgtaattacactgaattatgtcattttctcaaattacta 414  Q
    |||||||||||||||||| ||| |||||||||||| ||| |||| |||||    ||||||| |||| ||||||||||||||| ||||| | |||||| ||    
T  11610628 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacacgacttgacacttgtaactacactgaattatgtgatttttttaaattatta 11610529  T
Q  415 gctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    || |||| ||||| ||||| || |||| |||||    
T  11610528 gcggtgttggcgtgtcagtatctgtgttgtgtc 11610496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 363 - 454
Target Start/End: Complemental strand, 14829748 - 14829658
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| |||||| ||||||||  |||||||||| ||||| |||||||| ||||||||||||||| |||||||| ||||| |||||||||||    
T  14829748 cgacaccgacacttgtaattaccatgaattatgtgatttt-tcaaattattagctgtgtcggcgtgtcagtgtctgtgtcatgtccggtgtc 14829658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 358 - 457
Target Start/End: Complemental strand, 25093566 - 25093467
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||| |||||   ||||||||||||||| ||| |||||||||||| | || | |||||||||| | |||||| ||||||||||||||||||||    
T  25093566 gtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtccggtgtctgt 25093467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 436
Target Start/End: Complemental strand, 20503529 - 20503451
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    |||||| |||| |||||| |||||||||||||||||||||||||| |||||||| | | ||||||||||| ||||||||    
T  20503529 gtgtccaacaccgacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtc 20503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 381 - 454
Target Start/End: Original strand, 3164043 - 3164116
Alignment:
Q  381 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||||||||||| ||||| |||||||| ||||||||||| |||  || ||||||||||||||||||||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtc 3164116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 371 - 435
Target Start/End: Original strand, 4987299 - 4987363
Alignment:
Q  371 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgt 435  Q
    ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| |||||||    
T  4987299 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 458
Target Start/End: Complemental strand, 25064953 - 25064873
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgta 458  Q
    |||||||||| |||||||| ||||| |||||| | |||| |||||||||| ||| |||| |||||||||||||||||||||    
T  25064953 taattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccggtgtctgta 25064873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 370 - 453
Target Start/End: Complemental strand, 3610685 - 3610602
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 453  Q
    |||||| ||||||||||||| |||||| ||||| | |||||| || |||||| ||||| |||||||| ||||||||||||||||    
T  3610685 gacactggtaattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtcgtgtccggtgt 3610602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 370 - 449
Target Start/End: Complemental strand, 26508162 - 26508083
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||||| |||||||||||||||||||| ||||| |||||||| |||||||||| |||| ||||| || || |||||||||    
T  26508162 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtccg 26508083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 363 - 454
Target Start/End: Original strand, 41961650 - 41961741
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| |||||| |||||||||| |||| |||| || || |||||||| ||| |||| |||||| |||||||| |||||||||||||||||    
T  41961650 cgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtccggtgtc 41961741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 449
Target Start/End: Complemental strand, 14979224 - 14979154
Alignment:
Q  379 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||||||||||||||||| ||||| |||||||| |||||||||||||||  || ||||| |||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtgtccg 14979154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 436
Target Start/End: Complemental strand, 40052432 - 40052318
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac--tgacactcgtaattacactgaattatgtcattttctcaaattactag 415  Q
    ||||||||||||| ||||| |||||||||||||||| |||||||| |||||   |||||| || |      |||||||||| ||||| |||||||| |||    
T  40052432 cctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacgtcgacacttgtga------tgaattatgtgattttttcaaattattag 40052339  T
Q  416 ctgtgtcggcgtatcagtgtc 436  Q
    |||||||||||| ||||||||    
T  40052338 ctgtgtcggcgtgtcagtgtc 40052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 479
Target Start/End: Original strand, 750618 - 750735
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatca-gtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    |||||| |||||| |||||| ||  ||||||||| || || |||||||| ||| ||||||| ||| ||| ||||||||||||||||||||||| || |||    
T  750618 cgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagtgtccgtgtcgtgtccggtgtccgtgtcc 750717  T
Q  462 ttatctatgcttcatagg 479  Q
     ||||  |||||||||||    
T  750718 gtatccgtgcttcatagg 750735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 379 - 448
Target Start/End: Complemental strand, 9800083 - 9800014
Alignment:
Q  379 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 448  Q
    |||||||| ||||||||| |||||||||||||| |||  |||||||||| ||||||| ||||||||||||    
T  9800083 aattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 454
Target Start/End: Original strand, 16789668 - 16789741
Alignment:
Q  381 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||||||||||||||||||||||| || |||||||||| | || || |||||||| | |||||||||    
T  16789668 ttacactgaattatgtcattttctcaaattattatctgtgtcggcatctcggtatccgtgtcatctccggtgtc 16789741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 363 - 427
Target Start/End: Complemental strand, 14209172 - 14209108
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    ||||||||||||| |||||||||||||||||||| ||||| | |||||| ||| |||||||||||    
T  14209172 cgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgt 14209108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 363 - 447
Target Start/End: Complemental strand, 14216951 - 14216867
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    |||||| |||||| |||||||||||||||||| | || || | |||||| ||| ||||||| ||| |||||||||||||||||||    
T  14216951 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14216867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 363 - 447
Target Start/End: Complemental strand, 14223080 - 14222996
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    |||||| |||||| |||||||||||||||||| | || || | |||||| ||| ||||||| ||| |||||||||||||||||||    
T  14223080 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14222996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 478
Target Start/End: Original strand, 34307795 - 34307895
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    ||||||||||||| ||||| |||||||||||||| |||| ||||| |||| |  ||||| ||||| ||||||||||  || ||| |||| ||||||||||    
T  34307795 taattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtcatgtccggtgttcgtgtccgtatccatgcttcata 34307894  T
Q  478 g 478  Q
    |    
T  34307895 g 34307895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 358 - 422
Target Start/End: Original strand, 51206348 - 51206412
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    ||||||||||| |||||| ||| |||||||||||||||| ||||| |||||||| ||||||||||    
T  51206348 gtgtccgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtc 51206412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 453
Target Start/End: Original strand, 25652050 - 25652121
Alignment:
Q  382 tacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 453  Q
    ||||||||||||| |||||||||||||||| || | |||| ||||| | ||||||||||||||||| |||||    
T  25652050 tacactgaattatatcattttctcaaattattatccgtgttggcgtgttagtgtccgtgtcgtgtctggtgt 25652121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 41961578 - 41961628
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||||||||||||||||||||| || ||||| |||||    
T  41961578 cctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacac 41961628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 457
Target Start/End: Original strand, 12674466 - 12674595
Alignment:
Q  329 cggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatg---tcattttctcaaattactagctgtgtcggc 425  Q
    |||||||| ||||||| |||||||| |  || |||||||| |||||  | ||||||||||||||||    | |||||||||||||| |||| |||||||     
T  12674466 cggacactcctcggat-aggcgtgtccatgtatccgacac-gacacatgcaattacactgaattattatttgattttctcaaattattagcagtgtcggt 12674563  T
Q  426 gtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    || ||| ||||||||||||||| |||||||||    
T  12674564 gtgtcaatgtccgtgtcgtgtctggtgtctgt 12674595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 478
Target Start/End: Complemental strand, 14747621 - 14747511
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttct-caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    |||||| ||| || ||||||||||| |||||||| ||||| | ||||||| |||||||||||||      ||||| ||||||||||||||||| ||||||    
T  14747621 cgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggc------gtgtcagtgtcgtgtccggtgtccgtatcc 14747528  T
Q  462 ttatctatgcttcatag 478  Q
     ||||  ||||||||||    
T  14747527 gtatccgtgcttcatag 14747511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 440
Target Start/End: Complemental strand, 14832158 - 14832081
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtg 440  Q
    ||||||||||||| ||||||||| ||| |||||| ||||| |||||||| ||||||| ||||||| || || ||||||    
T  14832158 cgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgtccgtatccgtg 14832081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 34185052 - 34185101
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||| |||||||||||||||| |||||||| |||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 34185101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 49505149 - 49505230
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 439  Q
    |||||||||||||||||   |||||||||| |||||||| |||||||||||||| |||| || || |||| || ||||||||    
T  49505149 gtgtccgacactgacacatataattacactaaattatgtgattttctcaaattattagcggtctctgcgtgtcggtgtccgt 49505230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 449
Target Start/End: Original strand, 2620071 - 2620139
Alignment:
Q  381 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||| |||||||| |||||||||||| | |||  |||||||||| |||||||||| ||||||||||    
T  2620071 ttacacttaattatgtgattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 450
Target Start/End: Original strand, 5441046 - 5441118
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccgg 450  Q
    ||||| || |||||||||| |||||||||||||  |||| ||| |||||| |||||||| |||||||||||||    
T  5441046 taattccattgaattatgtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtccgg 5441118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 478
Target Start/End: Complemental strand, 11665988 - 11665888
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    |||||||||| |||| ||| ||||| |||||||| ||||  |||||| || | |||||  |||||||||||||||||||||||| |||   |||||||||    
T  11665988 taattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgttagtgtgtgtgtcgtgtccggtgtctgtatccatattcgtgcttcata 11665889  T
Q  478 g 478  Q
    |    
T  11665888 g 11665888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 437
Target Start/End: Complemental strand, 25775573 - 25775493
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcatt-ttctcaaattactagctgtgtcggcgtatcagtgtcc 437  Q
    ||||||||||| |||||| |||||||||||||||||||| ||| || |||||||| ||  ||||| ||||| |||||||||    
T  25775573 gtgtccgacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtcc 25775493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 25948902 - 25948966
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||||||||||| ||||| |||||||| |||| || ||||| | ||||||||||||||    
T  25948902 taattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtc 25948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 427
Target Start/End: Complemental strand, 34910376 - 34910312
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    |||||| ||| || |||||||||||||||||||| ||||| |||||||| ||| |||||||||||    
T  34910376 cgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgt 34910312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 49651715 - 49651759
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||    
T  49651715 cctatgaagcacggacacttctcggattaggtgtgtcccggtgtc 49651759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 422
Target Start/End: Complemental strand, 1509598 - 1509539
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    |||||| |||||| ||||||||||| |||||||| ||||| |||||||| ||||||||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 461
Target Start/End: Original strand, 4466619 - 4466698
Alignment:
Q  382 tacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||||||||||| | ||||||| |||||| || | ||||||| || ||||||| |||||| ||||||||||| ||||||    
T  4466619 tacactgaattatatgattttcttaaattattaccggtgtcggagtgtcagtgttcgtgtcatgtccggtgtccgtatcc 4466698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 320 - 367
Target Start/End: Original strand, 8789489 - 8789536
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgaca 8789536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 449
Target Start/End: Original strand, 14223872 - 14223939
Alignment:
Q  382 tacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||||| |||||| || ||||||||||||| || |||||||||||| || ||||| ||||||||||||    
T  14223872 tacactaaattatatcgttttctcaaattattatctgtgtcggcgtgtcggtgtctgtgtcgtgtccg 14223939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 20503584 - 20503541
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    |||||||||||||||||| |||||||||||||||| ||||||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtc 20503541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 442
Target Start/End: Complemental strand, 21720807 - 21720744
Alignment:
Q  379 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    |||||||||||||||||  || ||||||||||| || | |||||||||| ||||||||||||||    
T  21720807 aattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgtgtc 21720744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 424
Target Start/End: Complemental strand, 7928514 - 7928448
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    ||||||||||| |||||   ||||||||||||||||||| ||||| |||||||| |||| |||||||    
T  7928514 gtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcgg 7928448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 454
Target Start/End: Complemental strand, 14618823 - 14618749
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||||||||||||  |||||| |||||| |||  ||||| |||| |||||| |||||||||||| ||||||    
T  14618823 attacactgaattatgtggttttcttaaattattaggggtgtcagcgtctcagtgcccgtgtcgtgtctggtgtc 14618749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 27903758 - 27903708
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||||||||||||||||| || ||| ||||| |||||    
T  27903758 cctatgaagcacggacacttctcggattaggcatgatccagtgtcagacac 27903708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 438
Target Start/End: Original strand, 32400703 - 32400780
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccg 438  Q
    ||||||||||| |||||| |||||||||   |||||||| || || |||||||| ||||||||||| ||| ||||||||||    
T  32400703 gtgtccgacacggacacttgtaattaca---aattatgtaatcttttcaaattattagctgtgtcgccgtgtcagtgtccg 32400780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 442
Target Start/End: Complemental strand, 33359823 - 33359741
Alignment:
Q  360 gtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    |||||||||||||||| ||| ||||||| || ||||| |  || |||||||| |||||||||| |||| |||||||| |||||    
T  33359823 gtccgacactgacacttgtatttacactaaaatatgtgaccttttcaaattattagctgtgtcagcgtgtcagtgtctgtgtc 33359741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 448
Target Start/End: Complemental strand, 35312106 - 35312028
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 448  Q
    |||||| |||||||||||||||||||| |  || | |||||| ||  ||||||| | ||||||||||||||||||||||    
T  35312106 gacacttgtaattacactgaattatgtaacatttttaaattattaaatgtgtcgacatatcagtgtccgtgtcgtgtcc 35312028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 378 - 443
Target Start/End: Original strand, 11493376 - 11493441
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcg 443  Q
    ||||||||||||||||||| ||||||||| |||| |||  |||||| ||| ||| |||||||||||    
T  11493376 taattacactgaattatgtgattttctcacattattagtggtgtcgacgtgtcaatgtccgtgtcg 11493441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 331 - 404
Target Start/End: Complemental strand, 13414560 - 13414487
Alignment:
Q  331 gacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttct 404  Q
    |||||||||||||| |||||||| || ||||||||||| |||||   |||||||| |||||||| | |||||||    
T  13414560 gacacttctcggataaggcgtgtccctgtgtccgacaccgacacatataattacattgaattatttgattttct 13414487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 322 - 410
Target Start/End: Complemental strand, 21367382 - 21367289
Alignment:
Q  322 tgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacac-----tcgtaattacactgaattatgtcattttctcaaatt 410  Q
    |||||||| |||||||||||||||||| |||| |  ||||||||||| |||||      | | |||||||| ||||||||||||||||||||||    
T  21367382 tgaagcacagacacttctcggattaggtgtgtccaagtgtccgacaccgacacaacaaccatgattacactaaattatgtcattttctcaaatt 21367289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 368
Target Start/End: Complemental strand, 27505370 - 27505321
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||| |||||||||||| ||| |||||||| |||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacac 27505321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 378 - 459
Target Start/End: Original strand, 32429395 - 32429476
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtat 459  Q
    ||||| ||||||||||||| ||||||| |||||| ||||  |||||| || ||| ||| ||||| |||||||||||| ||||    
T  32429395 taattgcactgaattatgtgattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgtat 32429476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 363 - 436
Target Start/End: Original strand, 34185123 - 34185196
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    |||||| |||||| |||||||||||||||| ||| ||||| | |||||| |||| |||||||||| ||| ||||    
T  34185123 cgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgtcactgtc 34185196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 318 - 367
Target Start/End: Original strand, 40993274 - 40993323
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||| ||||    
T  40993274 cctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggaca 40993323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 422
Target Start/End: Complemental strand, 8593200 - 8593136
Alignment:
Q  359 tgtccgacactgacactcgtaattacactgaattatgtcattttct-caaattactagctgtgtc 422  Q
    |||||||||| |||||| ||||||| |||||||||||| ||||| | ||||||| ||||||||||    
T  8593200 tgtccgacaccgacacttgtaattatactgaattatgtgattttttccaaattagtagctgtgtc 8593136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 14979269 - 14979225
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||    
T  14979269 cctatgaagcacggacactcctcgggttaggcgtgtcccggtgtc 14979225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 422
Target Start/End: Original strand, 21256993 - 21257045
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    |||||| ||||||| |||||||||||| ||||| |||||||| ||||||||||    
T  21256993 gacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtc 21257045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 453
Target Start/End: Complemental strand, 24633823 - 24633736
Alignment:
Q  365 acactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 453  Q
    ||||||||| || ||||| ||| ||||||||| |||||||||||||| |||  |||||||| | ||| |||||||||| |||| |||||    
T  24633823 acactgacaatcataattgcaccgaattatgtgattttctcaaattattagtggtgtcggcatgtca-tgtccgtgtcatgtctggtgt 24633736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 427
Target Start/End: Complemental strand, 28812574 - 28812510
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    |||||| |||||| |||| ||||||||||||||| ||||  |||||||| ||| |||||||||||    
T  28812574 cgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgt 28812510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 32804555 - 32804630
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||||| |||||||| |||||||||||||| || | |||||||| | ||| || |||||||||| ||||||||    
T  32804555 taattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtcaatgcccgtgtcgtg-ccggtgtc 32804630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 442
Target Start/End: Original strand, 3865592 - 3865635
Alignment:
Q  399 ttttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    |||| |||||||| ||||||||||||||| ||||||||||||||    
T  3865592 ttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 3865635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 368
Target Start/End: Original strand, 4987222 - 4987269
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||| ||||||||| |||||||||||||||| |||||||| |||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacac 4987269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 407
Target Start/End: Complemental strand, 12084002 - 12083918
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaa 407  Q
    ||||||||||| |||||| ||| ||||||||  || | ||||||    ||||||||| ||||||||||||||||||||  |||||||||    
T  12084002 ctatgaagcacagacactcctcagattaggcacgtccaggtgtc----actgacacttgtaattacactgaattatgtagttttctcaa 12083918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 461
Target Start/End: Complemental strand, 16789056 - 16788973
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||||||||||||||| | ||||| | |||||| || || | |||| |||||||| |||||||| | || |||||||||||||    
T  16789056 taattacactgaattatatgatttttttaaattattaactatatcggtgtatcagtatccgtgtcatatctggtgtctgtatcc 16788973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 411
Target Start/End: Complemental strand, 20691361 - 20691330
Alignment:
Q  380 attacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||||||||||||||||||||||||    
T  20691361 attacactgaattatgtcattttctcaaatta 20691330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 411
Target Start/End: Complemental strand, 21149109 - 21149078
Alignment:
Q  380 attacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||||||||||||||||||||||||    
T  21149109 attacactgaattatgtcattttctcaaatta 21149078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 427
Target Start/End: Complemental strand, 25074831 - 25074784
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    |||||||| ||||||||||||||||||||||| || | ||||||||||    
T  25074831 attacactcaattatgtcattttctcaaattattatcggtgtcggcgt 25074784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 423
Target Start/End: Complemental strand, 34189469 - 34189426
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcg 423  Q
    ||||||||||| |||||||||||||||||||| || ||||||||    
T  34189469 attacactgaaatatgtcattttctcaaattattatctgtgtcg 34189426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 4990912 - 4990946
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||||| ||||||||||||||||    
T  4990912 ctatgaagcacggacactcctcggattaggcgtgt 4990946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 440
Target Start/End: Original strand, 5407262 - 5407324
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtg 440  Q
    |||||||| |||||||||| |||||||||||||  |||| |||||||||| || || ||||||    
T  5407262 taattacaatgaattatgtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtg 5407324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 424
Target Start/End: Original strand, 8789545 - 8789611
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    ||||||||||| |||||   ||||||||| ||||||||| ||||||||||||||  ||| |||||||    
T  8789545 gtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattataagccgtgtcgg 8789611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 8842448 - 8842414
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||||| ||||||||||||||||    
T  8842448 ctatgaagcacggacactcctcggattaggcgtgt 8842414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 442
Target Start/End: Original strand, 10318075 - 10318113
Alignment:
Q  404 tcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  10318075 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 10318113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 416
Target Start/End: Complemental strand, 11252022 - 11251984
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagc 416  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  11252022 taattacactgaattatgtgattttctcaaattattagc 11251984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 357
Target Start/End: Complemental strand, 11252095 - 11252057
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccg 357  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  11252095 ctatgaagcacagacactcctcggattaggcgtgttccg 11252057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 424
Target Start/End: Original strand, 11313815 - 11313861
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    |||||||||| |||||||| |||||||||||||| |||| |||||||    
T  11313815 taattacactaaattatgtgattttctcaaattattagcagtgtcgg 11313861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 14217021 - 14216979
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||||||||||||||||| |||| || |||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtc 14216979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 14223150 - 14223108
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||||||||||||||||| |||| || |||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtc 14223108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 448
Target Start/End: Original strand, 14840306 - 14840376
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 448  Q
    ||||||||||||||||||| ||||||| |||||| ||   |||| ||||| || || ||||||||||||||    
T  14840306 taattacactgaattatgtgattttctgaaattattaatggtgttggcgtgtcggtatccgtgtcgtgtcc 14840376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 424
Target Start/End: Original strand, 16192765 - 16192811
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    ||||||||||||||||||| |||||||||||||| || | |||||||    
T  16192765 taattacactgaattatgttattttctcaaattattaacggtgtcgg 16192811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 363 - 425
Target Start/End: Complemental strand, 27505305 - 27505243
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggc 425  Q
    |||||| |||||| ||||||||||| |||||||| |||||   |||||| |||||||||||||    
T  27505305 cgacaccgacacttgtaattacacttaattatgtgatttttaaaaattattagctgtgtcggc 27505243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 34910435 - 34910393
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||    
T  34910435 tatgaagcacggacactcctcggattagacgtgtcccggtgtc 34910393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 55401194 - 55401160
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||||| ||||||||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgt 55401160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 324 - 369
Target Start/End: Complemental strand, 1509681 - 1509636
Alignment:
Q  324 aagcacggacacttctcggattaggcgtgttccggtgtccgacact 369  Q
    ||||||||||||| ||| |||||||||||| |||||||| ||||||    
T  1509681 aagcacggacactcctccgattaggcgtgtaccggtgtcggacact 1509636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 427
Target Start/End: Original strand, 8039850 - 8039899
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    ||||||||||||||||| | |||||||||||||| |||| |||| |||||    
T  8039850 taattacactgaattatataattttctcaaattattagcggtgttggcgt 8039899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 427
Target Start/End: Complemental strand, 12704051 - 12704002
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    |||||||||||||||||||  ||||||||||||| |||  ||||||||||    
T  12704051 taattacactgaattatgtgcttttctcaaattattagtggtgtcggcgt 12704002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 348
Target Start/End: Complemental strand, 17276846 - 17276817
Alignment:
Q  319 ctatgaagcacggacacttctcggattagg 348  Q
    ||||||||||||||||||||||||||||||    
T  17276846 ctatgaagcacggacacttctcggattagg 17276817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 362
Target Start/End: Complemental strand, 29508567 - 29508526
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtc 29508526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 422
Target Start/End: Complemental strand, 9624685 - 9624641
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    |||||||| |||||||||| |||||||||||||| |||| |||||    
T  9624685 taattacattgaattatgtgattttctcaaattattagcagtgtc 9624641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 422
Target Start/End: Original strand, 10690277 - 10690321
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    ||||||||||||||||||| ||||||||| |||| |||| |||||    
T  10690277 taattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 368
Target Start/End: Original strand, 15999951 - 15999999
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||| ||||||||||| || ||||||||||||| |||||||| |||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacac 15999999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 422
Target Start/End: Original strand, 27277853 - 27277897
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    |||||||||| |||||||| |||||||||||||| |||| |||||    
T  27277853 taattacactaaattatgtgattttctcaaattattagcagtgtc 27277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 319 - 479
Target Start/End: Complemental strand, 46776 - 46625
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 418  Q
    |||||||||||||||||| ||||||||||||||||         |||||| |||| | |||||||||||||||||||| ||||| |||||||| || |||    
T  46776 ctatgaagcacggacactcctcggattaggcgtgt---------cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactg 46686  T
Q  419 tgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatagg 479  Q
    ||||||||| ||| ||||||||||||||||| |||| || ||| ||||  |||||||||||    
T  46685 tgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccgtatccgtgcttcatagg 46625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 358 - 476
Target Start/End: Original strand, 457 - 575
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||| |||||| |||||||||||||||| ||| ||||| |||||||| |||| ||||||||||||||||||||||| ||||| ||||||| ||    
T  457 gtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgt 556  T
Q  458 atccttatctatgcttcat 476  Q
     ||| ||||  ||||||||    
T  557 gtccgtatccgtgcttcat 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 4e-27; HSPs: 91)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 318 - 451
Target Start/End: Complemental strand, 27213645 - 27213518
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagct 417  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||  |      |||||||| |||||||||| ||||||| |||||| ||||     
T  27213645 cctatgaagcacggacacttctcggattagccgtgtcccggtgtccgacacata------taattacagtgaattatgtgattttctgaaattattagca 27213552  T
Q  418 gtgtcggcgtatcagtgtccgtgtcgtgtccggt 451  Q
    |||||||||| || || |||||||||||||||||    
T  27213551 gtgtcggcgtgtctgtatccgtgtcgtgtccggt 27213518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 363 - 454
Target Start/End: Complemental strand, 22652035 - 22651944
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| |||||| ||||||| | |||||||||| ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  22652035 cgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 22651944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 365 - 454
Target Start/End: Original strand, 29510306 - 29510395
Alignment:
Q  365 acactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||| |||||| ||||||| |||||||| ||| ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  29510306 acaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 29510395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 378 - 478
Target Start/End: Original strand, 24362217 - 24362317
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    ||||||||||||||||||| ||| |||||||||| |||| |||||||||| || ||||| ||||||| ||||||||| |||||| ||||| |||||||||    
T  24362217 taattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtatccgtatctgtgcttcata 24362316  T
Q  478 g 478  Q
    |    
T  24362317 g 24362317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 358 - 449
Target Start/End: Complemental strand, 20873133 - 20873042
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||||| |||||| ||||||||||| |||||||| ||||| |||||||| || || ||||||||| |||||||||||||||||||||    
T  20873133 gtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccg 20873042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 449
Target Start/End: Complemental strand, 24669536 - 24669406
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 418  Q
    |||||||||| |||| ||  ||||||||||| ||| | | ||| |||||| |||||| |||||||||||||||||||| |||| ||||||||| || | |    
T  24669536 ctatgaagcatggacgctcatcggattaggcatgtcctgatgttcgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacgg 24669437  T
Q  419 tgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||| |||| |||||||| ||||||||||||    
T  24669436 tgtcagcgtgtcagtgtctgtgtcgtgtccg 24669406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 478
Target Start/End: Original strand, 2572056 - 2572171
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 462  Q
    |||||| |||||| ||||||||||| |||||||| ||||| |||||||| ||| ||||||| ||| || || |||||||||||||| ||||| || |||     
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtgtccgtgtccg 2572155  T
Q  463 tatctatgcttcatag 478  Q
    |||| |||||||||||    
T  2572156 tatccatgcttcatag 2572171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 364 - 466
Target Start/End: Original strand, 4673426 - 4673528
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcctt 463  Q
    |||||||| ||| |||||||||||||||| | | ||||| |||||||| || |||||||||||| |||||||| |||||||||||| |||| |||||| |    
T  4673426 gacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtatccgt 4673525  T
Q  464 atc 466  Q
    |||    
T  4673526 atc 4673528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 319 - 454
Target Start/End: Original strand, 13436910 - 13437055
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc----------cgacactgacactcgtaattacactgaattatgtcattttctcaaa 408  Q
    ||||||||||| |||||| || ||||||||||||| ||||||||          |||||| |||||| || |||||  |||||||||| ||||| |||||    
T  13436910 ctatgaagcacagacactccttggattaggcgtgtcccggtgtcgacaccgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaa 13437009  T
Q  409 ttactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||| ||||||||||||||| ||||||||| |||| |||||||||||    
T  13437010 ttattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtc 13437055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 364 - 454
Target Start/End: Original strand, 22197743 - 22197833
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||||||| ||||||||||| |||||||| | ||| |||||||| ||||||||| ||||| | |||||| |||||||||||||||||    
T  22197743 gacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgtc 22197833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 378 - 459
Target Start/End: Original strand, 25192362 - 25192443
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtat 459  Q
    |||||| |||||||||||||| ||| |||||||| ||||||||||||||| ||||||||||| ||||||||| |||| ||||    
T  25192362 taattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgtat 25192443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 358 - 442
Target Start/End: Original strand, 36450749 - 36450833
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    |||||||||||  ||||| |||||||||||||||| ||| ||||| |||||||| ||| ||||||||||| ||||||||||||||    
T  36450749 gtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 36450833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 358 - 449
Target Start/End: Complemental strand, 8343380 - 8343289
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||| ||||||||||||| ||||||||||| |||||||| ||||| |||||||| ||||| |||||| || || ||||| ||||||||||||    
T  8343380 gtgtacgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcgtgtccg 8343289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 31557060 - 31556958
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||| ||||| || ||| |||||||||||||||||||| ||||| |||||||| || |||||||||||| |||||| || |||| ||||||||||| ||    
T  31557060 gtgtctgacaccgaaacttgtaattacactgaattatgtgatttt-tcaaattattaactgtgtcggcgtgtcagtgaccatgtcatgtccggtgtccgt 31556962  T
Q  458 atcc 461  Q
    ||||    
T  31556961 atcc 31556958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 360 - 454
Target Start/End: Original strand, 926785 - 926879
Alignment:
Q  360 gtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||| ||||||  |||||||||||||  |||  |||||||||||||| |||  |||| ||||| ||||||||||||||||||||||||||    
T  926785 gtccgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtc 926879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 451
Target Start/End: Original strand, 18170478 - 18170570
Alignment:
Q  359 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggt 451  Q
    |||||||||| |||| | ||||||||| |||||||||| ||||| |||||||  ||  ||||||||||| ||||||||||||||||| |||||    
T  18170478 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtgaccggt 18170570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 451
Target Start/End: Original strand, 18634046 - 18634138
Alignment:
Q  359 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggt 451  Q
    |||||||||| |||| | ||||||||| |||||||||| ||||| |||||||  ||  ||||||||||| ||||||||||||||||| |||||    
T  18634046 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtgaccggt 18634138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 422
Target Start/End: Complemental strand, 25566949 - 25566841
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtcc-----gacactgacactcgtaattacactgaattatgtcattttctcaaattact 413  Q
    ||||||||||| |||||| |||||||||||||||| ||||   ||     ||||| |||||| |||||||||||||||||||| ||||| |||||||| |    
T  25566949 ctatgaagcacagacactcctcggattaggcgtgtcccggacaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 25566850  T
Q  414 agctgtgtc 422  Q
    |||||||||    
T  25566849 agctgtgtc 25566841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 44067560 - 44067484
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||| |||||||||||||||||||||| || | |||||||||| |||||||| |||| ||||| ||||||    
T  44067560 taattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtctggtgtc 44067484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 360 - 435
Target Start/End: Complemental strand, 22596056 - 22595981
Alignment:
Q  360 gtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgt 435  Q
    |||||||||  ||||| |||||||||||||||||||| ||||| | |||||| ||||||||||||||| |||||||    
T  22596056 gtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 363 - 438
Target Start/End: Original strand, 30271291 - 30271366
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccg 438  Q
    |||||||| |||| |||||||||||| ||||||| ||||| |||||| | ||||||||||||||| ||||||||||    
T  30271291 cgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccg 30271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 378 - 477
Target Start/End: Complemental strand, 36934714 - 36934615
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    |||||||| |||||||||| ||||| || ||||| |||| |||||| ||| | ||||||||||||||||  ||||| ||||||| |||| ||||||||||    
T  36934714 taattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgtttggtgtttgtatccgtatccatgcttcata 36934615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 478
Target Start/End: Original strand, 24413554 - 24413675
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctc-aaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctg 456  Q
    ||||||||||||||||||  ||||||| |||||||||||  ||||||| |||||| || | ||||| |  | ||||||||||||||||||| |||||| |    
T  24413554 gtgtccgacactgacacttataattaccctgaattatgtatttttctcaaaattattaacggtgtcagtatgtcagtgtccgtgtcgtgtctggtgtccg 24413653  T
Q  457 tatccttatctatgcttcatag 478  Q
    | ||| ||||  ||||||||||    
T  24413654 tgtccgtatccgtgcttcatag 24413675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 319 - 411
Target Start/End: Complemental strand, 4948754 - 4948663
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    |||||||||||| |||||  |  ||||||||||||  || |||||||||| |||||| |||||||||||||||||||| ||||| ||||||||    
T  4948754 ctatgaagcacgtacactcattcgattaggcgtgtctcg-tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaatta 4948663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 363 - 439
Target Start/End: Original strand, 15816129 - 15816205
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 439  Q
    |||||| ||||||  |||||||||| |||||||| ||||| |||||||| ||| ||||||||||| |||||||||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 358 - 434
Target Start/End: Complemental strand, 24613584 - 24613509
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtg 434  Q
    ||||||||||| |||||| ||||||||||| |||||||| ||||| |||||||| |||||||||||| || ||||||    
T  24613584 gtgtccgacaccgacacttgtaattacacttaattatgtgatttt-tcaaattattagctgtgtcggtgtgtcagtg 24613509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 15816058 - 15816101
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtc 15816101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 416
Target Start/End: Complemental strand, 3025615 - 3025557
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagc 416  Q
    |||||||||||||||||   ||||||||||||||||||| |||||||||||||| ||||    
T  3025615 gtgtccgacactgacacctataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 378 - 460
Target Start/End: Original strand, 11927101 - 11927183
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 460  Q
    ||||||||||||||||||| ||||| |||||||| || | |||||||||||| ||  ||||||||||||  |||||| |||||    
T  11927101 taattacactgaattatgtgattttatcaaattattaacagtgtcggcgtattagcatccgtgtcgtgtttggtgtccgtatc 11927183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 436
Target Start/End: Original strand, 13844591 - 13844669
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    ||||||||||| |||||   |||||||||| |||||||| |||||||||||||| |||| |||||||||| || |||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtc 13844669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 449
Target Start/End: Original strand, 4298887 - 4298972
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||| |||||| ||||||||| | |||||||| ||||| |||||||| || |||||||||||| | ||| || ||||||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtccg 4298972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 5813656 - 5813575
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 439  Q
    ||||||||||| |||||| ||| ||||||| || ||||| | ||| |||||||| ||||||||||||||| || ||||||||    
T  5813656 gtgtccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtccgt 5813575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 424
Target Start/End: Complemental strand, 8343089 - 8342970
Alignment:
Q  316 cccctatgaagcacggacacttctcggattaggcgtgttccggtgtc-----------cgacactgacactcgtaattacactgaattatgtcattttct 404  Q
    |||||||||||||| ||||||  ||||||||||||||| ||||||||           |||||| |||||| ||||||||||| |||||||| ||||| |    
T  8343089 cccctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacatgtacgacaccgacacttgtaattacactaaattatgtgatttttt 8342990  T
Q  405 caaattactagctgtgtcgg 424  Q
    ||||||| ||||| ||||||    
T  8342989 caaattattagctatgtcgg 8342970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 467
Target Start/End: Complemental strand, 26434244 - 26434135
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    |||||| |||| ||||||  |||||| | |||||||||| ||||||||||| || |||   ||| |||||||| |||||| | ||||||||| |||||||    
T  26434244 gtgtccaacaccgacacttttaattatattgaattatgtgattttctcaaactattagtgatgtaggcgtatcggtgtccatatcgtgtccgatgtctgt 26434145  T
Q  458 atccttatct 467  Q
    |||| |||||    
T  26434144 atccatatct 26434135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 439
Target Start/End: Complemental strand, 34897129 - 34897068
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 439  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||| ||| || ||||||||    
T  34897129 taattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 411
Target Start/End: Complemental strand, 40332255 - 40332202
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    |||||| |||| |||||| |||||||||||||||||||| ||||||||||||||    
T  40332255 gtgtcccacaccgacacttgtaattacactgaattatgtgattttctcaaatta 40332202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 430
Target Start/End: Complemental strand, 7658507 - 7658455
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatc 430  Q
    ||||||||||||||||||| |||||||||||||| |||  |||||||||||||    
T  7658507 taattacactgaattatgtaattttctcaaattattagtggtgtcggcgtatc 7658455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 446
Target Start/End: Complemental strand, 11803303 - 11803235
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 446  Q
    ||||||||||||||||||| ||||||| |||||| || | ||||| | |||||||||| ||||||||||    
T  11803303 taattacactgaattatgtgattttcttaaattattaacagtgtcagtgtatcagtgttcgtgtcgtgt 11803235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 437
Target Start/End: Original strand, 30077385 - 30077461
Alignment:
Q  361 tccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtcc 437  Q
    |||||||| |||||| |||||||||||||||||||| || || |||||||| |||||| || ||||| || ||||||    
T  30077385 tccgacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtccgtgtcc 30077461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 37283825 - 37283901
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||||||||||| ||||||||| |||| |||| ||| | || | |||||||||||||| |||| ||||||    
T  37283825 taattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgtccgtgtcatgtctggtgtc 37283901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 447
Target Start/End: Original strand, 41838131 - 41838207
Alignment:
Q  371 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    ||||| ||| || ||||||||||||| ||||| | |||||| ||||||||||| ||| ||||||||||| |||||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 41838207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 461
Target Start/End: Complemental strand, 13203685 - 13203602
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||||||||||||||||| |||||||||||||| |||   ||| | |||||||||||  |||||||||| ||| || ||||||    
T  13203685 taattacactgaattatgtaattttctcaaattattagtgttgttgacgtatcagtgtttgtgtcgtgtcgggtatccgtatcc 13203602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 320 - 367
Target Start/End: Original strand, 24205749 - 24205796
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  24205749 tatgaaacacggacactcctcggattaggcgtgttccggtgtcagaca 24205796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 442
Target Start/End: Original strand, 31109514 - 31109597
Alignment:
Q  359 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||||||||   || ||| |||||||| | | |||||||||||||| || | |||||||||| ||||||||||||||    
T  31109514 tgtccgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgtgtc 31109597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 449
Target Start/End: Complemental strand, 42874586 - 42874495
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||||| ||||||||||| || |||||| |||||||||||||||||||||| |  || | |||||| ||| || ||||  ||||||||||||    
T  42874586 gtgtccaacactgacacttgtgattacattgaattatgtcattttctcaaaatgttaacggtgtcgacgtgtccgtgttagtgtcgtgtccg 42874495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 424
Target Start/End: Complemental strand, 4611578 - 4611532
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  4611578 taattacactgaattatgttattttctcaaattattagcggtgtcgg 4611532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 24858054 - 24857978
Alignment:
Q  380 attacactgaattatgtcattttct---caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 453  Q
    ||||||||||||||||| ||||| |   ||||||| || |||||||||||| ||  |||||||||||||||||||||    
T  24858054 attacactgaattatgtgatttttttttcaaattattaactgtgtcggcgtgtccatgtccgtgtcgtgtccggtgt 24857978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 29510232 - 29510282
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||| |||||    
T  29510232 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 29510282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 427
Target Start/End: Original strand, 31236532 - 31236641
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccg--gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagct 417  Q
    ||||| |||||||||||||| || ||||  |||| ||   ||||||| ||| |||||   |||||||| |||||||||| |||||||||||||| ||||     
T  31236532 tatgaggcacggacacttctagggttagctgtgtcccatcgtgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagca 31236631  T
Q  418 gtgtcggcgt 427  Q
    ||||||||||    
T  31236632 gtgtcggcgt 31236641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 422
Target Start/End: Complemental strand, 31514973 - 31514872
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtca-ttttctcaaattactagct 417  Q
    |||||||||||||||||| ||||||||||||||||    |||||| ||||  ||||| ||| |||| ||||||||||| | |||| |||||||| ||| |    
T  31514973 ctatgaagcacggacactcctcggattaggcgtgt---cgtgtccaacaccaacacttgtagttacgctgaattatgtgatttttttcaaattattagtt 31514877  T
Q  418 gtgtc 422  Q
    |||||    
T  31514876 gtgtc 31514872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 353
Target Start/End: Complemental strand, 39820547 - 39820513
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||||||||||||||||||||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtgt 39820513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 436
Target Start/End: Original strand, 39954294 - 39954352
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    |||||||||| |||||||| |||||||||||||| |||| |||||||||| || |||||    
T  39954294 taattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcggtgtc 39954352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 447
Target Start/End: Complemental strand, 18407771 - 18407695
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    |||||| |||||||||||||||||||| ||||| |  ||||| ||||||||||||| | || |||| |||||||||||    
T  18407771 gacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtcggcatgtctgtgt-cgtgtcgtgtc 18407695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 368
Target Start/End: Complemental strand, 22652106 - 22652057
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||| |||||||||| ||||| |||||||| |||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacac 22652057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 457
Target Start/End: Complemental strand, 39820471 - 39820394
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    |||||||| |||||| |||||||||||||||| ||   | ||| |||| || ||||| ||||||||||||||||||||    
T  39820471 attacactaaattatatcattttctcaaattattatacgggtcagcgtgtcggtgtctgtgtcgtgtccggtgtctgt 39820394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 354 - 414
Target Start/End: Complemental strand, 1433413 - 1433353
Alignment:
Q  354 tccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattacta 414  Q
    ||||||||||||||| ||| |  || |||||| || |||||||||||||||||||||||||    
T  1433413 tccggtgtccgacaccgacgcatgttattacattggattatgtcattttctcaaattacta 1433353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 4673353 - 4673397
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    |||||||||||| |||||| || ||||||||||||||||||||||    
T  4673353 cctatgaagcacagacactccttggattaggcgtgttccggtgtc 4673397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 8343449 - 8343397
Alignment:
Q  316 cccctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||| ||||||  ||||||||||||||| |||||||| |||||    
T  8343449 cccctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacac 8343397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 479
Target Start/End: Complemental strand, 27101577 - 27101458
Alignment:
Q  359 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgta 458  Q
    ||||||||||||||||   ||||| |||| |||||||| ||||| |||||||| |||| |||||||||| ||| ||||| | |||| | || |||| ||     
T  27101577 tgtccgacactgacacctataatt-cactaaattatgtgattttttcaaattattagcggtgtcggcgtgtcaatgtccatatcgtattcgatgtcggtg 27101479  T
Q  459 tccttatctatgcttcatagg 479  Q
    ||  |||| ||||||||||||    
T  27101478 tctgtatccatgcttcatagg 27101458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 4786336 - 4786411
Alignment:
Q  361 tccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    |||||||| |||||   ||||||||||||||||||| ||||||| |||||| ||   |||||||||| ||||||||    
T  4786336 tccgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 448
Target Start/End: Complemental strand, 14692500 - 14692434
Alignment:
Q  381 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 448  Q
    ||||||||||||||||||||| ||||||||| || ||||||| | || ||||||||||| ||| ||||    
T  14692500 ttacactgaattatgtcattt-ctcaaattattatctgtgtcagagtgtcagtgtccgtatcgggtcc 14692434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 17751775 - 17751732
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||    
T  17751775 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtc 17751732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 17760762 - 17760719
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||    
T  17760762 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtc 17760719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 22204705 - 22204622
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgt-cat-tttctcaaattactagctgtgtcggcgtatcagtgtccgt 439  Q
    ||||| |||||||||||| |||||||||||||||||| |  || ||| | |||||| ||| ||||||||||| |||||||||||    
T  22204705 gtgtctgacactgacacttgtaattacactgaattatatatatattttttaaattattagttgtgtcggcgtgtcagtgtccgt 22204622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 461
Target Start/End: Original strand, 24196632 - 24196695
Alignment:
Q  398 attttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||| |||||||| ||| ||||||||||| || |||||||| |||| | ||||||||||||||    
T  24196632 attttttcaaattattagttgtgtcggcgtgtcggtgtccgtatcgtattcggtgtctgtatcc 24196695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 455
Target Start/End: Original strand, 28883899 - 28883970
Alignment:
Q  384 cactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtct 455  Q
    |||||||||||||||||||||||||||| ||   ||| |||| | |||||||||||| | |||| |||||||    
T  28883899 cactgaattatgtcattttctcaaattattattcgtggcggcatgtcagtgtccgtgacatgtcaggtgtct 28883970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 423
Target Start/End: Original strand, 29447111 - 29447170
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcg 423  Q
    ||||| |||||| ||| ||||| |||||||||| |||||||||||||| ||| |||||||    
T  29447111 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtcg 29447170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 445
Target Start/End: Complemental strand, 29776080 - 29776013
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtg 445  Q
    |||||| ||||||||| || |||||||||||||| |||| |||||| | | ||| |||||||||||||    
T  29776080 taattatactgaattacgtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtg 29776013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 425
Target Start/End: Original strand, 41831947 - 41832002
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggc 425  Q
    |||||| ||| |||||||||||||||| ||||| |||||||| || ||||||||||    
T  41831947 gacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcggc 41832002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 460
Target Start/End: Complemental strand, 11944709 - 11944627
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 460  Q
    |||||||||||| |||||| ||||| |||||||| || | |||||||||| | ||  ||||||||||||  |||||| |||||    
T  11944709 taattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtccgtatc 11944627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 15131733 - 15131783
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||| ||| ||| |||||||||  |||||||||||||    
T  15131733 cctatgaagcacggacacctctaggactaggcgtgtcgcggtgtccgacac 15131783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 22197670 - 22197720
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||| ||||||||||||| ||| ||||||||||| ||||||||| |||||    
T  22197670 cctataaagcacggacactcctcagattaggcgtgatccggtgtcggacac 22197720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 24413499 - 24413533
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgt 353  Q
    ||||||||||||||||||||||||||||| |||||    
T  24413499 ctatgaagcacggacacttctcggattagacgtgt 24413533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 3951476 - 3951525
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||| ||| || |||||||||||||||| ||||| |||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacac 3951525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 411
Target Start/End: Complemental strand, 14134743 - 14134710
Alignment:
Q  378 taattacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||||||||||| ||||||||||||||    
T  14134743 taattacactgaattatgtgattttctcaaatta 14134710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 355
Target Start/End: Original strand, 24727684 - 24727717
Alignment:
Q  322 tgaagcacggacacttctcggattaggcgtgttc 355  Q
    ||||||||| ||||||||||||||||||||||||    
T  24727684 tgaagcacgaacacttctcggattaggcgtgttc 24727717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 411
Target Start/End: Original strand, 34201061 - 34201094
Alignment:
Q  378 taattacactgaattatgtcattttctcaaatta 411  Q
    |||||||| |||||||||||||||||||||||||    
T  34201061 taattacattgaattatgtcattttctcaaatta 34201094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 6065586 - 6065634
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||||||||||||||||| || | |||| ||||||||||||||| ||||    
T  6065586 ctatgaagcacggacactccttgaattatgcgtgttccggtgtcggaca 6065634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 439
Target Start/End: Complemental strand, 7442896 - 7442828
Alignment:
Q  371 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 439  Q
    ||||| |||||||||||||||||||| ||||| | |||||| |||| |||| ||| | | |||||||||    
T  7442896 acacttgtaattacactgaattatgtaattttatgaaattattagcggtgttggcatgttagtgtccgt 7442828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 11803389 - 11803341
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||||||||||||||||| |||||||||| ||||| || ||||| ||||    
T  11803389 ctatgaagcacggacactcctcggattagacgtgtacctgtgtcggaca 11803341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 416
Target Start/End: Original strand, 12559123 - 12559159
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagc 416  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  12559123 attacactgaattatatcattttctcaaattattagc 12559159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 422
Target Start/End: Complemental strand, 14731756 - 14731712
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    |||||||||| |||||||| |||||||||||||| |||| |||||    
T  14731756 taattacactaaattatgtgattttctcaaattattagcagtgtc 14731712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 321 - 361
Target Start/End: Complemental strand, 16988030 - 16987990
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgttccggtgt 361  Q
    |||||||||||||||| ||||||||||| |||| |||||||    
T  16988030 atgaagcacggacactcctcggattaggggtgtcccggtgt 16987990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 446
Target Start/End: Complemental strand, 17751699 - 17751651
Alignment:
Q  398 attttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 446  Q
    ||||||| ||||||||| | |||||||||| ||||||||||||| ||||    
T  17751699 attttctgaaattactaccggtgtcggcgtgtcagtgtccgtgttgtgt 17751651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 446
Target Start/End: Complemental strand, 17760686 - 17760638
Alignment:
Q  398 attttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 446  Q
    ||||||| ||||||||| | |||||||||| ||||||||||||| ||||    
T  17760686 attttctgaaattactaccggtgtcggcgtgtcagtgtccgtgttgtgt 17760638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 364 - 436
Target Start/End: Original strand, 20679396 - 20679468
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    ||||| ||||||  ||||||||||||| ||||| |||||||||||||| |||  |||||| | | ||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtc 20679468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 449
Target Start/End: Original strand, 27067300 - 27067387
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggc---gtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||||||| |||||||||  ||||||||| |||||||||||| | |||  ||||||||   || |||||| | ||||||||||||    
T  27067300 cgacactgacacttgtaattaca--gaattatgtaattttctcaaatcattagtggtgtcggcagtgtgtcagtgactgtgtcgtgtccg 27067387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 381 - 461
Target Start/End: Complemental strand, 28642449 - 28642369
Alignment:
Q  381 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    |||||||||||||||| | ||| |||||||| || | |||||   || ||| ||||||||||||||||| |||| ||||||    
T  28642449 ttacactgaattatgtaaatttttcaaattattaaccgtgtcaatgtgtcattgtccgtgtcgtgtccgatgtccgtatcc 28642369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 381 - 449
Target Start/End: Complemental strand, 28745539 - 28745471
Alignment:
Q  381 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||| |||||||||| | ||| |||||||| |||| ||||||  |||||| | |||||||||||||||    
T  28745539 ttacattgaattatgtgaatttttcaaattattagcagtgtcgatgtatcattatccgtgtcgtgtccg 28745471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 368
Target Start/End: Original strand, 29447040 - 29447088
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||||| || ||||||||||||| | |||||| |||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacac 29447088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 358 - 454
Target Start/End: Original strand, 33405379 - 33405475
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||| |||||   |||||||||| ||||||||  ||||||||||||| || | | | | | || ||||||||| |||||||||| |||||    
T  33405379 gtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattattaacagggccagtgtgtcagtgtccatgtcgtgtccagtgtc 33405475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 4e-27; HSPs: 88)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 318 - 460
Target Start/End: Original strand, 19536360 - 19536495
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttct-caaattactagc 416  Q
    ||||||||||| ||||||| ||||||||||||||||        ||||||| |||||| |||||||||||||||||||| ||||| | ||||||| |||     
T  19536360 cctatgaagcatggacactcctcggattaggcgtgt--------ccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagt 19536451  T
Q  417 tgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 460  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||    
T  19536452 tgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatc 19536495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 318 - 476
Target Start/End: Complemental strand, 21616865 - 21616708
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagct 417  Q
    |||||||||||||||||||||| ||||||| ||||| ||||   | |||||  ||||   ||||||||||||||||||| |||||||||||||| ||||     
T  21616865 cctatgaagcacggacacttcttggattagccgtgt-ccggcaccggacacgtacacatataattacactgaattatgtgattttctcaaattattagcg 21616767  T
Q  418 gtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcat 476  Q
    |||||||||| || ||||||||||||||||  |||||||| ||| ||||  ||||||||    
T  21616766 gtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtgtccgtatccgtgcttcat 21616708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 318 - 461
Target Start/End: Original strand, 20539631 - 20539772
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagct 417  Q
    ||||||||||||||||||| ||||||| ||||||||  ||     |||||| |||||| ||||||||||| |||||| | ||||| |||||||| |||||    
T  20539631 cctatgaagcacggacactcctcggatcaggcgtgtctcgcca--cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagct 20539728  T
Q  418 gtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    |||||| ||| |||||||||||||||||||| ||||| ||||||    
T  20539729 gtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatcc 20539772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 358 - 457
Target Start/End: Complemental strand, 15972937 - 15972838
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||| |||||| |||||||||||||||| ||| ||||| |||||||| ||  ||||||||||| |||||||||||||||| || |||||||||    
T  15972937 gtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatctggtgtctgt 15972838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 378 - 459
Target Start/End: Original strand, 21782833 - 21782914
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtat 459  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||| |||||||  ||||||||||| ||||||||||    
T  21782833 taattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtat 21782914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 321 - 442
Target Start/End: Original strand, 42832234 - 42832355
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtg 420  Q
    |||||||| ||||||| || ||||||||||||| |||| ||| ||||| ||||||  ||||||||||||| ||||| |||||||||||||| |||| |||    
T  42832234 atgaagcaaggacactccttggattaggcgtgtcccggagtcggacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtg 42832333  T
Q  421 tcggcgtatcagtgtccgtgtc 442  Q
    |||| || || | |||||||||    
T  42832334 tcggtgtgtctgagtccgtgtc 42832355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 21624331 - 21624227
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaa-ttactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctg 456  Q
    ||||||||||| |||||| |||||||||||||||||||  ||||| | ||| ||| ||||||||||||||| |||||||| ||||||||| ||||||| |    
T  21624331 gtgtccgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccg 21624232  T
Q  457 tatcc 461  Q
    |||||    
T  21624231 tatcc 21624227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 358 - 449
Target Start/End: Original strand, 30404845 - 30404936
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||||||| |||||||||||||| ||||||    
T  30404845 gtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccg 30404936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 364 - 454
Target Start/End: Complemental strand, 18276579 - 18276489
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||| ||||| | |||||||||||||||| || |||||||||||||| |||| |||||||| |||||||||| || ||||||||||||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtc 18276489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 360 - 442
Target Start/End: Complemental strand, 37559039 - 37558957
Alignment:
Q  360 gtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||| |||||| ||||||||| |||||||||| |||||  ||||||| ||||||||||||||| ||||||||||||||    
T  37559039 gtccgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtc 37558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 358 - 454
Target Start/End: Original strand, 2438714 - 2438808
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| | |||||| |||||||||| |||  |||||||||||||  |||||||||||    
T  2438714 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtcagcg--tcagtgtccgtgttttgtccggtgtc 2438808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 369 - 442
Target Start/End: Original strand, 21374705 - 21374778
Alignment:
Q  369 tgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| | ||||||||||||    
T  21374705 tgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtc 21374778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 358 - 449
Target Start/End: Original strand, 18841008 - 18841099
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||| ||||| |||||| ||||||||||| |||||||| ||||| |||||||| ||| |||||| |||| ||||||||| |||||||||||    
T  18841008 gtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtccatgtcgtgtccg 18841099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 378 - 461
Target Start/End: Complemental strand, 23718070 - 23717988
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||||||||||||||||| | |||||||||||| |||| ||||||| || |||||||||||||| ||||| ||||||||||||    
T  23718070 taattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatcc 23717988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 378 - 461
Target Start/End: Complemental strand, 24105742 - 24105660
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||||||||||||||||| | |||||||||||| |||| ||||||| || |||||||||||||| ||||| ||||||||||||    
T  24105742 taattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatcc 24105660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 380 - 454
Target Start/End: Original strand, 10535776 - 10535850
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||||||||||||||||||||||||||| || | |||||||||||| ||| || ||||||||| |||||||    
T  10535776 attacactgaattatgtcattttctcaaattattatcggtgtcggcgtattagtatctgtgtcgtgtacggtgtc 10535850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 449
Target Start/End: Complemental strand, 21091786 - 21091696
Alignment:
Q  359 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||| |||||||||||| |||||||||||||| ||||| ||||||| |||||| |||| ||||||| || ||||||||||| | |||||||    
T  21091786 tgtctgacactgacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgtccgtcttgtgtccg 21091696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 363 - 452
Target Start/End: Complemental strand, 15657923 - 15657834
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtg 452  Q
    |||||| |||| | |||||||||||||||||||| |||||  ||||||| ||| || |||||||| | ||||||||||||||||||||||    
T  15657923 cgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtccggtg 15657834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 369 - 442
Target Start/End: Complemental strand, 39323317 - 39323244
Alignment:
Q  369 tgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||| |||||||||||||||||||| ||||| |||||||| |||| |||||| ||| ||||||||||||||    
T  39323317 tgacacttgtaattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgtgtc 39323244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 454
Target Start/End: Complemental strand, 18422027 - 18421931
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||| |||||| |||||| |||||||||||||||||||| || || | |||||| ||  ||||||||||| |||||||||||||||| |||| ||||    
T  18422027 gtgttcgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatccgatgtc 18421931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 447
Target Start/End: Complemental strand, 30335476 - 30335392
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    |||||| |||| | ||||||||||| |||||||||||||| |||||||| ||| |||||||||||   |||||||||||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtc 30335392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 478
Target Start/End: Complemental strand, 31284092 - 31283992
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    |||||||| || ||||||| |||||||||||||| |||| |||||||||| | ||||| |||||  ||||||||||| || ||| ||||| |||||||||    
T  31284092 taattacaatggattatgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccggtgtccgtgtccgtatctgtgcttcata 31283993  T
Q  478 g 478  Q
    |    
T  31283992 g 31283992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 370 - 444
Target Start/End: Complemental strand, 6940307 - 6940233
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgt 444  Q
    |||||| ||||||||||| |||||||| | ||| | |||||| ||||||||||||||| ||||||||||||||||    
T  6940307 gacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgt 6940233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 454
Target Start/End: Complemental strand, 31018689 - 31018558
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 418  Q
    ||||||||||| |||||| |||||||||| ||    |  ||||||||||| |||||   |||||||||| ||| |||| ||||||| |||||| |||| |    
T  31018689 ctatgaagcactgacactcctcggattagacg----cacgtgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcgg 31018594  T
Q  419 tgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||| ||||| ||||||||| |||||| |||||||||    
T  31018593 tgttggcgtgtcagtgtccatgtcgtatccggtgtc 31018558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 358 - 436
Target Start/End: Original strand, 38117154 - 38117232
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    |||||||||||  ||||| |||||||||| ||| ||||| ||||| |||||||| ||||||||||||||| ||||||||    
T  38117154 gtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 447
Target Start/End: Original strand, 20242722 - 20242811
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    ||||||||||| |||||   ||||||||||||||||||| ||||||| |||  | ||| ||||||||||| ||||||||| |||||||||    
T  20242722 gtgtccgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtccatgtcgtgtc 20242811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 370 - 443
Target Start/End: Original strand, 30717537 - 30717610
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcg 443  Q
    |||||| |||||||||||||||||||| ||||| |||||||| ||||| ||||||  | |||||||||||||||    
T  30717537 gacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgtgtcg 30717610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 479
Target Start/End: Original strand, 34784997 - 34785098
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    |||||||||| |||||||| ||||||| |||  | ||| |||||||| || ||||||||||||||||||| || ||| || ||| ||||| |||||||||    
T  34784997 taattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtctggggtccgtgtccgtatctgtgcttcata 34785096  T
Q  478 gg 479  Q
    ||    
T  34785097 gg 34785098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 358 - 454
Target Start/End: Original strand, 43586000 - 43586096
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||| |||||| || |||||| |||||||||||||||||||||| |  || |||||| | ||| |||||||| ||  |||||||||||||    
T  43586000 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttatctgtgttgacgtgtcagtgtcagtaccgtgtccggtgtc 43586096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 447
Target Start/End: Original strand, 11223864 - 11223947
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||| || |||||||||| |||| || |||||| |||| ||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtcagcgtgtctgtgtccatgtcatgtc 11223947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 411
Target Start/End: Complemental strand, 23921355 - 23921264
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||||||||| ||   ||||  ||||||||||||||||||||  | | |  ||||||||||||||||||| ||||||||||||||    
T  23921355 tatgaagcacggacactccttaaattaaacgtgttccggtgtccgacaccaatatttataattacactgaattatgtaattttctcaaatta 23921264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 441
Target Start/End: Complemental strand, 24894433 - 24894370
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgt 441  Q
    ||||| ||||||||||||| ||||| | |||||| ||||||||||||||| |||||||||||||    
T  24894433 taattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtgt 24894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 433
Target Start/End: Original strand, 12668423 - 12668493
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagt 433  Q
    |||||| ||||||  ||||||||||||||||||||||||| |||||||| ||| | ||||||||| |||||    
T  12668423 cgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagt 12668493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 377 - 447
Target Start/End: Original strand, 12940949 - 12941019
Alignment:
Q  377 gtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    |||||||||||||||||| | ||||| |||||||| ||| ||||||  ||| |||||||||||||||||||    
T  12940949 gtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtc 12941019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 380 - 454
Target Start/End: Original strand, 23354669 - 23354743
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||| |||||| |||||||||||||||| || ||||||| || | || ||||||||||| |||||||||||    
T  23354669 attacactaaattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtcatgtccggtgtc 23354743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 449
Target Start/End: Original strand, 36756344 - 36756430
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||||| ||||||  ||||||||||||||||||| ||||  |||||||| ||| ||||||| ||| |||||||| ||||||| ||||    
T  36756344 cgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgtatccg 36756430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 37419874 - 37419824
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||||||| |||||||||||||||| |||||||| |||||    
T  37419874 cctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 37419824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 447
Target Start/End: Original strand, 27286307 - 27286376
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    |||||||||| |||||||| || || |||||||| ||||  ||||||||||||||||||||| |||||||    
T  27286307 taattacacttaattatgtgatcttatcaaattattagcgttgtcggcgtatcagtgtccgtatcgtgtc 27286376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 478
Target Start/End: Complemental strand, 28677953 - 28677852
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc-gtgtccggtgtctgtatccttatctatgcttcat 476  Q
    ||||||||||||||||||| ||||| |||||||| |||| ||||||||||  ||||||| ||||| ||||||| |||  || | | ||||| ||||||||    
T  28677953 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgttccagtgtcagtgtcagtgtccgttgtacgtgtacgtatctgtgcttcat 28677854  T
Q  477 ag 478  Q
    ||    
T  28677853 ag 28677852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 447
Target Start/End: Original strand, 14996224 - 14996308
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttct-caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    ||||| |||||| ||||||||||| |||||| | ||||| | ||||||| ||||||||||||| | |||||||||||||| ||||    
T  14996224 gacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtcatgtc 14996308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 443
Target Start/End: Complemental strand, 20473427 - 20473301
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccgg---tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagc 416  Q
    |||||||||||||||||  || | ||| | |||||||||   |||||||||  |||||| |||||||||||||||||| | | ||| | |||||| |||     
T  20473427 tatgaagcacggacactcttcaggttaagtgtgttccggccgtgtccgacatcgacacttgtaattacactgaattatatgagttttttaaattattagt 20473328  T
Q  417 tgtgtcggcgtatcagtgtccgtgtcg 443  Q
    ||||||||| | |||||||| ||||||    
T  20473327 tgtgtcggcatgtcagtgtctgtgtcg 20473301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 28412394 - 28412318
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||||||||||| ||||| |||||||| || | |||| | ||| | ||||||||||||||||| ||||||    
T  28412394 taattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtc 28412318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 454
Target Start/End: Complemental strand, 896253 - 896181
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| |||| ||||| ||||||||||| || |||| |||||||||| |||||||  |||||||||||||||||    
T  896253 attacattgaaatatgtgattttctcaaactattagcagtgtcggcgtgtcagtgt--gtgtcgtgtccggtgtc 896181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 324 - 447
Target Start/End: Original strand, 23058389 - 23058527
Alignment:
Q  324 aagcacggacacttctcggattaggcgtgttccggtgtc--------------cgacactgacactcgtaattacactgaattatgtca-ttttctcaaa 408  Q
    |||||||||||||||||||||||||||||| ||||||||              |||||| |||||| |||||||||||| ||||||| | |||| |||||    
T  23058389 aagcacggacacttctcggattaggcgtgtcccggtgtcggacaacaccgacacgacaccgacacttgtaattacactggattatgtgatttttttcaaa 23058488  T
Q  409 ttactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    ||| ||  ||||| ||||| ||| |||||||||||||||    
T  23058489 ttattaattgtgtgggcgtgtcactgtccgtgtcgtgtc 23058527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 437
Target Start/End: Complemental strand, 27460070 - 27460011
Alignment:
Q  379 aattacactgaattatgtcattttct-caaattactagctgtgtcggcgtatcagtgtcc 437  Q
    ||||| |||||||||||||||||| | ||||||| ||||||||||||||| |||||||||    
T  27460070 aattatactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtcc 27460011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 408
Target Start/End: Original strand, 8300202 - 8300264
Alignment:
Q  346 aggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaa 408  Q
    |||||||| ||||||||| |||| ||||||  | |||||||| ||||||||||||||||||||    
T  8300202 aggcgtgtcccggtgtccaacaccgacacttatgattacactaaattatgtcattttctcaaa 8300264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 436
Target Start/End: Original strand, 15909647 - 15909705
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    ||||||||||||||||||| ||||||||||| |  ||||||| ||||||| ||||||||    
T  15909647 taattacactgaattatgtaattttctcaaaattttagctgtatcggcgtgtcagtgtc 15909705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 368
Target Start/End: Complemental strand, 26769641 - 26769592
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||| |||||||||||||||| || ||||| |||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacac 26769592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 358 - 449
Target Start/End: Complemental strand, 28596533 - 28596445
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||||| ||||||  |||||||||||| |||||| || || |  |||||   ||||||||||||| ||| |||||||||||||||||    
T  28596533 gtgtccgacaccgacacttataattacactgacttatgtgatgtttttcaatta---gctgtgtcggcgtgtcattgtccgtgtcgtgtccg 28596445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 33884116 - 33884067
Alignment:
Q  357 ggtgtccgacactgacactcgtaattacactgaattatgtcattttctca 406  Q
    ||||| |||||| |||||| ||||||||||||||| ||||||||||||||    
T  33884116 ggtgttcgacaccgacacttgtaattacactgaatcatgtcattttctca 33884067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 38117099 - 38117148
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||  |||||||||||||||| |||||||| |||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacac 38117148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 11223793 - 11223841
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||||||||||||||||| ||| |||||||||||| |||||||| ||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca 11223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 16069269 - 16069333
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||||||||| | ||||| | |||||| || | |||||||||| ||||||||||||||    
T  16069269 taattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 29176367 - 29176411
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||| | ||||||||||||||||||||||| |||||||    
T  29176367 cctatgaagcatgaacacttctcggattaggcgtgtttcggtgtc 29176411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 442
Target Start/End: Original strand, 34221504 - 34221576
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    |||||| |||||| ||  |||||||||  |||| |||||||| ||||||||||||| ||||||| ||||||||    
T  34221504 gacacttgtaattgcatagaattatgtatttttttcaaattattagctgtgtcggcatatcagtatccgtgtc 34221576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 37411259 - 37411323
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    |||| |||||||||||||| |||||||||||||| |||| |||||||| | |||| ||| |||||    
T  37411259 taatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtcagcgtctgtgtc 37411323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 368
Target Start/End: Complemental strand, 19942382 - 19942335
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||| ||||||| |||||||||||||||| |||||||| |||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacac 19942335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 436
Target Start/End: Complemental strand, 31808134 - 31808063
Alignment:
Q  365 acactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    ||||||||||   ||||||||||||||||||| ||||| | |||||| |||| ||||||| || ||||||||    
T  31808134 acactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgtc 31808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 438
Target Start/End: Complemental strand, 37419802 - 37419727
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccg 438  Q
    |||||| | |||| |||||||||||||||| ||| ||||| |||||||| | ||  ||||||||| ||||||||||    
T  37419802 cgacaccggcacttgtaattacactgaattttgtgattttttcaaattatttgccatgtcggcgtgtcagtgtccg 37419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 37559096 - 37559053
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtc 37559053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 425
Target Start/End: Complemental strand, 5040798 - 5040729
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtca--ttttctcaaattactagctgtgtcggc 425  Q
    ||||||||||| |||||| ||||||||| |||||||||| |  |||| |||||||| ||||||| |||||    
T  5040798 gtgtccgacaccgacacttgtaattacattgaattatgtgattttttttcaaattattagctgtatcggc 5040729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 454
Target Start/End: Original strand, 11308021 - 11308094
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||||||||||||||| |||||||| || | |||||||  |||| |||| |||| | |||||||||||    
T  11308021 attacactgaattatgtcattttttcaaatta-tatccgtgtcggtatatcggtgttcgtgccatgtccggtgtc 11308094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 18420363 - 18420397
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgt 353  Q
    ||||||||||| |||||||||||||||||||||||    
T  18420363 ctatgaagcacagacacttctcggattaggcgtgt 18420397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 384 - 454
Target Start/End: Original strand, 23355016 - 23355086
Alignment:
Q  384 cactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||| |||||| |||||||||||||||| || ||||||| || | || ||||||||||| ||||| |||||    
T  23355016 cactaaattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtcatgtcccgtgtc 23355086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 32200609 - 32200659
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||| ||| ||| |||||||||  |||||||||||||    
T  32200609 cctatgaagcacggacacctctaggactaggcgtgtcgcggtgtccgacac 32200659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 368
Target Start/End: Original strand, 34006929 - 34006979
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||||||| || | |||||| ||||||||||||| |||||    
T  34006929 cctatgaagcacggacactccttgaattaggtgtgttccggtgtcagacac 34006979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 477
Target Start/End: Complemental strand, 44860364 - 44860273
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    ||||||||||||||||||  |||||||||||||| |||| |||        ||||||||||||||||||| |||||  |||||| ||||  |||||||||    
T  44860364 taattacactgaattatgcgattttctcaaattattagcggtg--------tcagtgtccgtgtcgtgtctggtgtacgtatccgtatccgtgcttcata 44860273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 411
Target Start/End: Complemental strand, 5367256 - 5367203
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||| |||||   ||||||||||||||||||| |||| |||||||||    
T  5367256 gtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaatta 5367203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 10535685 - 10535734
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||| ||||| |||||||||||||||| | |||||| |||||    
T  10535685 ctatgaagcacgaacactcctcggattaggcgtgtcctggtgtcagacac 10535734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 368
Target Start/End: Original strand, 14996171 - 14996208
Alignment:
Q  331 gacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacac 14996208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 454
Target Start/End: Original strand, 18420436 - 18420525
Alignment:
Q  365 acactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||| ||||||  ||||| || |||||||||| |||||||||||||| |||| |||| ||||| ||||| |  || |||||| |||||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagtatatgtctcgtgttcggtgtc 18420525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 411
Target Start/End: Complemental strand, 18571036 - 18570983
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    |||| ||||||||||||   | |||||| |||||||||||||||||||||||||    
T  18571036 gtgttcgacactgacacatatgattacattgaattatgtcattttctcaaatta 18570983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 427
Target Start/End: Complemental strand, 19574022 - 19573973
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    ||||||||||||||||||| ||||||| |||||| || | ||||||||||    
T  19574022 taattacactgaattatgttattttcttaaattattatcggtgtcggcgt 19573973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 368
Target Start/End: Complemental strand, 35056998 - 35056949
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||| ||| ||||||||||||| | ||||| |||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacac 35056949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 447
Target Start/End: Original strand, 36409642 - 36409711
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    |||||||||| |||||||| ||||| ||||||||  ||| |||||||| | | ||| |||||||||||||    
T  36409642 taattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 42511322 - 42511371
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||| |||||||||| ||||| || ||||| |||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacac 42511371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 423
Target Start/End: Complemental strand, 974806 - 974746
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcg 423  Q
    |||||| |||||| ||||||||||||||| |||| || || |||||||| ||| |||||||    
T  974806 cgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtcg 974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 321 - 353
Target Start/End: Original strand, 2438661 - 2438693
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||| ||||||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgt 2438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 4332970 - 4332894
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||| |||||||||| |||||| ||||||| || | |||||||| | | ||| || ||| |||||||||||||    
T  4332970 taattacattgaattatgtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgtccggtgtc 4332894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 368
Target Start/End: Complemental strand, 17651681 - 17651633
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||| | | |||||||||||||  |||||||||||||    
T  17651681 tatgaagcacggacacctttaggattaggcgtgtcgcggtgtccgacac 17651633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 358 - 449
Target Start/End: Complemental strand, 18589260 - 18589171
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||||||||||||||||   || ||| |||||||| ||| |||||||  ||||| |||| |||||||||| | ||| |||||||| ||||||    
T  18589260 gtgtccgacactgacacatatagttagactgaattgtgtaattttct--aattattagcagtgtcggcgtgttagtatccgtgtcatgtccg 18589171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 431 - 479
Target Start/End: Original strand, 18631467 - 18631515
Alignment:
Q  431 agtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatagg 479  Q
    |||||||||||||||||||||||| || | | ||||| |||||||||||    
T  18631467 agtgtccgtgtcgtgtccggtgtccgtgttcgtatctgtgcttcatagg 18631515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 456
Target Start/End: Original strand, 30298464 - 30298540
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctg 456  Q
    ||||||||||||||||||||||| | |||||| || | |||||| ||| || | || ||| ||||||| ||||||||    
T  30298464 attacactgaattatgtcattttattaaattattatcggtgtcgacgtgtcggcgttcgtatcgtgtctggtgtctg 30298540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 407
Target Start/End: Original strand, 32749825 - 32749869
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaa 407  Q
    |||||||||||||  | ||||||||||||||||| ||||||||||    
T  32749825 cgacactgacacttattattacactgaattatgtgattttctcaa 32749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 427
Target Start/End: Complemental strand, 33153483 - 33153419
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    |||||| |||||| |||||||||||||||||||| ||||| | |||| | ||| ||| |||||||    
T  33153483 cgacacggacacttgtaattacactgaattatgtgatttttttaaatcattagatgtttcggcgt 33153419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 446
Target Start/End: Complemental strand, 35449557 - 35449489
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 446  Q
    ||||||||||||||| ||| |||||||||||||| || | |||| ||| | |||||||  |||||||||    
T  35449557 taattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagtgtttgtgtcgtgt 35449489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 436
Target Start/End: Complemental strand, 37986821 - 37986765
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    |||||||| || ||| ||||||| |||||||| || |||||||||||| ||||||||    
T  37986821 attacactcaaatatatcattttttcaaattattatctgtgtcggcgtgtcagtgtc 37986765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 411
Target Start/End: Complemental strand, 40682025 - 40681993
Alignment:
Q  379 aattacactgaattatgtcattttctcaaatta 411  Q
    ||||||| |||||||||||||||||||||||||    
T  40682025 aattacattgaattatgtcattttctcaaatta 40681993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 6e-26; HSPs: 122)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 363 - 479
Target Start/End: Original strand, 6612171 - 6612287
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 462  Q
    |||||| |||||| |||||||||||||||||||| ||||| |||||||| || |||| ||||||| ||| |||||||||||||||||||||  || |||     
T  6612171 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccggtgttcgtgtccg 6612270  T
Q  463 tatctatgcttcatagg 479  Q
    ||||| |||||||||||    
T  6612271 tatctgtgcttcatagg 6612287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 436
Target Start/End: Original strand, 22881566 - 22881689
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgt-----ccgacactgacactcgtaattacactgaattatgtcattttctcaaattac 412  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||     ||||||| |||||| ||||||||||| |||||||| ||||| ||||||||     
T  22881566 cctatgaagcacggacactcctcggattagacgtgtcccggtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 22881665  T
Q  413 tagctgtgtcggcgtatcagtgtc 436  Q
    ||| ||||||||||| ||||||||    
T  22881666 tagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 478
Target Start/End: Original strand, 29144319 - 29144472
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagct 417  Q
    |||||||||||||||||||  |||||||||||||||||||||||| ||||||       |||||||||||| ||||| |  |||| |||||||| |||||    
T  29144319 cctatgaagcacggacactcttcggattaggcgtgttccggtgtcggacactt------gtaattacactgcattatctatttttttcaaattattagct 29144412  T
Q  418 gtgtcggcgtatcagtgtccgtgt-cgtgtccggtgtctgtatccttatctatgcttcatag 478  Q
    ||||||||||||||||||| |||| ||||||  || ||||| ||| |||| |||||||||||    
T  29144413 gtgtcggcgtatcagtgtcagtgtccgtgtc--gtatctgtgtccgtatccatgcttcatag 29144472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 319 - 449
Target Start/End: Original strand, 48450550 - 48450673
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 418  Q
    |||||||||||||||||| |||||||||| ||||| || ||||||||||||       ||||||||||| |||||||| ||||| |||||||| ||||||    
T  48450550 ctatgaagcacggacactcctcggattagacgtgt-cctgtgtccgacactt------gtaattacactaaattatgttattttttcaaattattagctg 48450642  T
Q  419 tgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||| ||||| |||||||||||||||||||||    
T  48450643 tgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 378 - 480
Target Start/End: Original strand, 398780 - 398882
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    ||||||||||||||||||| ||||| |||||||| |||| |||||||||| |||||||||||||||||||||||||| |  ||| ||||  |||||||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcata 398879  T
Q  478 gga 480  Q
    |||    
T  398880 gga 398882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 324 - 477
Target Start/End: Original strand, 3490352 - 3490498
Alignment:
Q  324 aagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcg 423  Q
    ||||||||||||||||||||||||  |||| ||  |||| ||||| |||||| ||||||||||||||| ||||  ||||||||||||| |||| ||||||    
T  3490352 aagcacggacacttctcggattagatgtgtcccaatgtcggacac-gacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcg 3490450  T
Q  424 gcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    ||      ||||| |||||||||||||||||||||||| ||||  |||||||||    
T  3490451 gc------gtgtcagtgtcgtgtccggtgtctgtatccgtatccgtgcttcata 3490498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 358 - 479
Target Start/End: Original strand, 41877465 - 41877586
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||| |||||| ||||||||||| |||||||| |||||||||||||| |||| ||||||||||| ||||||| |||||||||| ||| ||  |    
T  41877465 gtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtctggtatccat 41877564  T
Q  458 atccttatctatgcttcatagg 479  Q
     ||| ||||  |||||||||||    
T  41877565 gtccgtatccgtgcttcatagg 41877586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 319 - 436
Target Start/End: Original strand, 35702542 - 35702661
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccg--gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagc 416  Q
    |||||||||||||||||| |||||||||||||||| ||   |||||||||||||||||| ||||||||||| |||||| | |  || |||||||| ||||    
T  35702542 ctatgaagcacggacactcctcggattaggcgtgtcccatcgtgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagc 35702641  T
Q  417 tgtgtcggcgtatcagtgtc 436  Q
    ||||||||| | ||||||||    
T  35702642 tgtgtcggcatgtcagtgtc 35702661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 370 - 457
Target Start/End: Complemental strand, 31015095 - 31015008
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    |||||| |||||||||||||||||||| |||||||||||||| ||||||||| ||||  |||||| |||||||||| |||||||||||    
T  31015095 gacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgt 31015008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 363 - 477
Target Start/End: Original strand, 1486709 - 1486823
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 462  Q
    |||||| ||||||  ||||||||||||||||||| ||||| |||||||| |||||||||| |||| ||||| |||||||||| |||||| || || |||     
T  1486709 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgtgtccg 1486808  T
Q  463 tatctatgcttcata 477  Q
    |||| ||||||||||    
T  1486809 tatccatgcttcata 1486823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 359 - 461
Target Start/End: Original strand, 5927336 - 5927438
Alignment:
Q  359 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgta 458  Q
    ||||||||||||||||| ||||||||| | |||||| | ||||| |||||||| |||| ||||  |||| |||||||||||||||||||||||||| |||    
T  5927336 tgtccgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgta 5927435  T
Q  459 tcc 461  Q
    |||    
T  5927436 tcc 5927438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 320 - 453
Target Start/End: Complemental strand, 9103741 - 9103609
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgt 419  Q
    |||||||||||||||||  |  |||||||||| || ||||||||||||| |||||| ||| ||| ||| |||||||| ||||| |||||||| || ||||    
T  9103741 tatgaagcacggacactcttaagattaggcgtttttcggtgtccgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgt 9103643  T
Q  420 gtcggcgtatcagtgtccgtgtcgtgtccggtgt 453  Q
    |||||||| |||||||||| ||| |||| |||||    
T  9103642 gtcggcgtgtcagtgtccgagtcctgtcaggtgt 9103609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 321 - 421
Target Start/End: Original strand, 25452108 - 25452206
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtg 420  Q
    |||||||||||||||| |||| |||||||||||||||||||| ||||| ||||  | ||||||||||||||||||  |||||||||||||| |||| |||    
T  25452108 atgaagcacggacactgctcgaattaggcgtgttccggtgtctgacaccgaca--cataattacactgaattatgagattttctcaaattattagcagtg 25452205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 359 - 483
Target Start/End: Original strand, 42359445 - 42359569
Alignment:
Q  359 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgta 458  Q
    |||||||||| |||||| |||||||||||||||| ||| ||||| |||||||| ||| |||||| |||| ||||||||||||| |||| ||||||  ||     
T  42359445 tgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgtacggtgttcgtg 42359544  T
Q  459 tccttatctatgcttcataggatac 483  Q
    ||| ||||  |||||||||| ||||    
T  42359545 tccgtatccgtgcttcatagaatac 42359569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 358 - 442
Target Start/End: Original strand, 46348378 - 46348462
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||| |||||| ||||||||||| |||||| | ||||| |||||||| ||||||||||||||| ||||||||||||||    
T  46348378 gtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 46348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 363 - 450
Target Start/End: Original strand, 5376500 - 5376587
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccgg 450  Q
    |||||| ||||||  ||||||||||||||||||| ||||||| |||||| |||| |||||||||| | ||||||||||||||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccgg 5376587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 318 - 427
Target Start/End: Complemental strand, 13436563 - 13436453
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttc-cggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagc 416  Q
    |||||||||||||||||||||||||||||| |||||||   |||||||||||  ||||   ||||||||||||||||||| |||| || |||||| ||||    
T  13436563 cctatgaagcacggacacttctcggattagtcgtgttctacgtgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattagc 13436464  T
Q  417 tgtgtcggcgt 427  Q
     ||||||||||    
T  13436463 agtgtcggcgt 13436453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 466
Target Start/End: Original strand, 48040418 - 48040565
Alignment:
Q  323 gaagcacggacacttctcggattaggcgtgttccggtgtccgacact---gacactcgtaattacactgaattatgtcat-tttctcaaattactagctg 418  Q
    |||||||||||||| |||  ||||||||||| || ||||| |||||    |||||| ||| ||||||| || ||||| |  ||| |||||||| || |||    
T  48040418 gaagcacggacactcctccaattaggcgtgtcccagtgtcggacacgaccgacacttgtatttacactaaaatatgtgacctttttcaaattattatctg 48040517  T
Q  419 tgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatc 466  Q
    ||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  48040518 tgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccatatc 48040565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 382 - 454
Target Start/End: Original strand, 2896140 - 2896212
Alignment:
Q  382 tacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||| ||||||||||||| ||||||| ||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccgttgtc 2896212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 358 - 478
Target Start/End: Original strand, 38078656 - 38078771
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||| |||||| ||||||||| |||||||||| ||||| |||||||| ||||||||||| ||| |||||||     |||||||||||||| ||    
T  38078656 gtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgt-----tcgtgtccggtgtccgt 38078750  T
Q  458 atccttatctatgcttcatag 478  Q
     ||| ||||  ||||||||||    
T  38078751 gtccgtatccgtgcttcatag 38078771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 378 - 461
Target Start/End: Original strand, 10572604 - 10572687
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||||||| ||||||||| |||||||||||||| |||  |||||||||| ||||||| | |||||||||||||||| ||||||    
T  10572604 taattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatcc 10572687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 378 - 461
Target Start/End: Original strand, 19562636 - 19562718
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||||||||||| ||||  |||||||||||||| |||| |||||||||| ||||||| ||||| |||||||||||||||||||    
T  19562636 taattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagtgttcgtgt-gtgtccggtgtctgtatcc 19562718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 358 - 440
Target Start/End: Original strand, 22515882 - 22515964
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtg 440  Q
    ||||||||||| |||||| ||||||||||| |||||||| ||||| |||||||| |||||||||| |||| || |||||||||    
T  22515882 gtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtccgtg 22515964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 363 - 477
Target Start/End: Original strand, 31694710 - 31694824
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtca--ttttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 460  Q
    |||||| |||||| ||||||| |||||||||||| |  |||| |||||||| ||||| ||||| ||||||||||||  |||||||||||||||| |||||    
T  31694710 cgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagctatgtcgacgtatcagtgtc--tgtcgtgtccggtgtccgtatc 31694807  T
Q  461 cttatctatgcttcata 477  Q
    | ||||  |||||||||    
T  31694808 cgtatccgtgcttcata 31694824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 378 - 451
Target Start/End: Complemental strand, 1262928 - 1262855
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggt 451  Q
    |||||| | |||||||||| |||||||||||||| ||||||||||||||| || |||| |||||||||||||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccggt 1262855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 380 - 457
Target Start/End: Original strand, 20157367 - 20157444
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||||||||| ||||||||| |||| |||| ||||||  || |||||| ||||||||||||||||||||||    
T  20157367 attacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccggtgtctgt 20157444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 318 - 402
Target Start/End: Original strand, 46940747 - 46940832
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac-tgacactcgtaattacactgaattatgtcatttt 402  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| |||||  || ||| ||||||||||| |||||||| |||||    
T  46940747 cctatgaagcacgaacactcctcggattaggcgtgttccggtgtcggacacgcgaaacttgtaattacacttaattatgttatttt 46940832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 478
Target Start/End: Original strand, 10577750 - 10577850
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    ||||||||||| ||| ||| ||||||| |||  | ||||||||||||||| || ||||||||||||||||||||||| || ||| ||||  |||||||||    
T  10577750 taattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcata 10577849  T
Q  478 g 478  Q
    |    
T  10577850 g 10577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 440
Target Start/End: Original strand, 12443422 - 12443537
Alignment:
Q  324 aagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcg 423  Q
    ||||||||| ||  ||||||||||| ||||  ||||||||||||| | |||    |||||||||||||||||| |||||||||||||| |||||||||||    
T  12443422 aagcacggatacccctcggattaggtgtgtctcggtgtccgacac-gtcacatacaattacactgaattatgtgattttctcaaattattagctgtgtcg 12443520  T
Q  424 gcgtatcagtgtccgtg 440  Q
    |||| || || ||||||    
T  12443521 gcgtgtccgtatccgtg 12443537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 449
Target Start/End: Original strand, 19058851 - 19058943
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatc-agtgtccgtgtcgtgtccg 449  Q
    ||||||||||| |||||| |||||||||||||||||||| || || | |||||| ||||||||||||||| || |||||  ||||||||||||    
T  19058851 gtgtccgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtcaagtgtgtgtgtcgtgtccg 19058943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 454
Target Start/End: Complemental strand, 40917808 - 40917719
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| || ||| ||||||||||| |||| ||  ||||| |||||||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  40917808 cgacaccgagacttgtaattacacttaattgtg--attttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtc 40917719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 479
Target Start/End: Complemental strand, 47989556 - 47989441
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 462  Q
    |||||| |||||| |||||||||||||||||||| ||||| | |||||| ||  ||||||||||| |||||||| |||||||||| ||| || || ||      
T  47989556 cgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtatccgtgtctg 47989458  T
Q  463 tatctatgcttcatagg 479  Q
    |||| ||||||||||||    
T  47989457 tatccatgcttcatagg 47989441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 6427394 - 6427323
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||||||| |||||||||| |||||||||||||| |||| |||| ||||| |||||||||||| ||||||||    
T  6427394 taattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 363 - 454
Target Start/End: Original strand, 7918211 - 7918302
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||||   ||||||||||||||||||| |||||||||||||| |||   |||| |||| ||| |||| |||||||||||||||||    
T  7918211 cgacactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccggtgtc 7918302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 325 - 454
Target Start/End: Original strand, 13011172 - 13011307
Alignment:
Q  325 agcacggacacttctcggattaggcgtgttccggtgt-----ccgacactgacactcgtaattacactgaattatgtcattttct-caaattactagctg 418  Q
    |||||||||||| ||||||||||| |||||| |||||     || | ||  ||||| ||||||||||| |||||||| ||||| | ||||||| ||||||    
T  13011172 agcacggacactcctcggattaggtgtgttctggtgttgtgtccaaaaccaacacttgtaattacacttaattatgtgatttttttcaaattattagctg 13011271  T
Q  419 tgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||| | ||||||| |||||||||| |||||||    
T  13011272 tgtcggcatgtcagtgttcgtgtcgtgttcggtgtc 13011307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 370 - 449
Target Start/End: Original strand, 14359529 - 14359607
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||||| ||||||||||| |||||||| ||||| |||||||| ||||||||||||||| || ||||| ||||||||||||    
T  14359529 gacacttgtaattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtccg 14359607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 365 - 448
Target Start/End: Complemental strand, 21378635 - 21378552
Alignment:
Q  365 acactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 448  Q
    |||| |||||| |||||||||||||||||||| ||||| |||| ||| |||||||||||| || ||  ||||||||||||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgtgtcgtgtcc 21378552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 358 - 437
Target Start/End: Original strand, 31672890 - 31672969
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtcc 437  Q
    ||||||||||| || ||| ||||||||||||||||| || ||||| |||||||| |||||||||||| || |||||||||    
T  31672890 gtgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcc 31672969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 378 - 453
Target Start/End: Complemental strand, 34298480 - 34298405
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 453  Q
    ||||||||||||||||||| |||||||||||||| |||  ||||||| || ||||| ||||||||||||| |||||    
T  34298480 taattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtctggtgt 34298405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 411
Target Start/End: Original strand, 2288124 - 2288215
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    |||||||||||| |||| | ||||||||||||||| || |||||||||||| ||||  | |||||||| |||||||||| ||||||| ||||||    
T  2288124 cctatgaagcactgacattcctcggattaggcgtgctcaggtgtccgacaccgaca--cataattacattgaattatgtgattttcttaaatta 2288215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 363 - 454
Target Start/End: Complemental strand, 5944342 - 5944249
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttct--caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| ||||||  ||||||||||||||||||| ||||| |  ||||||| |||||||| |||||| |||||||| |||||||||||| ||||    
T  5944342 cgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtccgatgtc 5944249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 436
Target Start/End: Complemental strand, 36878505 - 36878447
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||| ||||||||    
T  36878505 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 485 - 539
Target Start/End: Original strand, 39832752 - 39832806
Alignment:
Q  485 gtatgtgctcctaaactaaatgtcttctaagtgtgtaagatctgccagaggatac 539  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||    
T  39832752 gtatgtgcttctaaactaaatgtcttctaagtgtgtaacatctgtcagaggatac 39832806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 432
Target Start/End: Complemental strand, 113350 - 113289
Alignment:
Q  371 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcag 432  Q
    ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||    
T  113350 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 447
Target Start/End: Complemental strand, 9709884 - 9709795
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    ||||||||||| |||||   ||||||||  ||||||||| |||||||||||||| |||| |||| ||| | |||||||||||||||||||    
T  9709884 gtgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 318 - 438
Target Start/End: Original strand, 24334663 - 24334781
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtca--ttttctcaaattactag 415  Q
    ||||||||||||||||||| || ||||||||||||     ||||||||||| |||||| ||||||||||||||||||| ||  |||| |||||| | |||    
T  24334663 cctatgaagcacggacactacttggattaggcgtgac---gtgtccgacaccgacacttgtaattacactgaattatg-cattttttttcaaatgattag 24334758  T
Q  416 ctgtgtcggcgtatcagtgtccg 438  Q
    ||||||||| || || |||||||    
T  24334759 ctgtgtcggtgtgtccgtgtccg 24334781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 19324606 - 19324530
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||||||||||| ||||||||||||||  ||| |||||| |||||||||| | |||  ||||||||||||    
T  19324606 taattacactgaattatgtgattttctcaaattatcagcagtgtcgacgtatcagtgcctgtgctgtgtccggtgtc 19324530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 358 - 438
Target Start/End: Complemental strand, 37598895 - 37598816
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccg 438  Q
    ||||||||||| ||||||  ||||||||||||||| ||| ||||| |||||||| ||| ||||||||||| ||||||||||    
T  37598895 gtgtccgacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 5898281 - 5898352
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||||||||||||| ||||| ||| |||| |||| |||||||||| |||||||| ||||| ||||||    
T  5898281 taattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtcatgtccg 5898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 367 - 449
Target Start/End: Original strand, 37055860 - 37055942
Alignment:
Q  367 actgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||| ||| ||||||||||| |||||||| |||||||||||||| |||| || |||  ||||||||||| ||||| ||||||    
T  37055860 actgatacttgtaattacactaaattatgtaattttctcaaattattagcagtatcgatgtatcagtgtctgtgtcatgtccg 37055942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 439
Target Start/End: Complemental strand, 1815321 - 1815240
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 439  Q
    ||||| ||||| |||||| |||||||||||||||||||| ||||| | |||| | ||  ||||||||||| |||||||||||    
T  1815321 gtgtcggacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 1815240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 454
Target Start/End: Original strand, 15641048 - 15641121
Alignment:
Q  381 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||||| |||| ||||||| |||||| |||| |||||||| | |||||||||||||| |||||| ||||    
T  15641048 ttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtc 15641121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 411
Target Start/End: Complemental strand, 18337393 - 18337340
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| ||||||||    
T  18337393 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaatta 18337340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 377 - 442
Target Start/End: Original strand, 18556470 - 18556535
Alignment:
Q  377 gtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||| | |||||||| || || |||||||| ||||||||||||||| ||||||||||||||    
T  18556470 gtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 436
Target Start/End: Original strand, 24577186 - 24577259
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    |||||| |||||| |||||||||||||||||||| ||||| |||||||| ||| |||||| |||| || |||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtc 24577259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 31694637 - 31694682
Alignment:
Q  317 ccctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  31694637 ccctatgaagcacggacactcctcagattaggcgtgttccggtgtc 31694682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 479
Target Start/End: Complemental strand, 38503364 - 38503263
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    ||||||||||||| ||| | |||||||||||||| |||| ||||||| || | |||||||||||| ||||| ||||| || ||| ||||  ||| |||||    
T  38503364 taattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtccgtgtccgtatccgtgcatcata 38503265  T
Q  478 gg 479  Q
    ||    
T  38503264 gg 38503263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 439
Target Start/End: Original strand, 1704992 - 1705068
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 439  Q
    |||||| |||||| |||||||| ||||||||||| ||||| |||||||| ||| |||||||| || || ||||||||    
T  1704992 cgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccgt 1705068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 446
Target Start/End: Original strand, 1864895 - 1864962
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 446  Q
    ||||||||||||||||||| |||||||||||||| || ||||||||| |||| ||| || |||||||||    
T  1864895 taattacactgaattatgtgattttctcaaattattaactgtgtcggtgtat-agtatctgtgtcgtgt 1864962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 436
Target Start/End: Original strand, 17831548 - 17831604
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||| ||||||||    
T  17831548 attacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 425
Target Start/End: Complemental strand, 51410089 - 51410021
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtca-ttttctcaaattactagctgtgtcggc 425  Q
    ||||||||||| |||||| |||||||||||||||||||| | |||| |||||||| ||| |||||||||    
T  51410089 gtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgtcggc 51410021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 478
Target Start/End: Original strand, 609482 - 609573
Alignment:
Q  387 tgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 478  Q
    |||||||||| |||||||||||||| |||  |||||||||| |||||||   ||||||||||| ||||||| ||| |||   ||||||||||    
T  609482 tgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgttgatgtcgtgtccgatgtctgtgtccgtatacgtgcttcatag 609573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 454
Target Start/End: Complemental strand, 15323206 - 15323131
Alignment:
Q  379 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    ||||||||| |||||||| ||||| |||||||| || |||| ||| | | ||||||||| ||||||||||||||||    
T  15323206 aattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcgtgtccggtgtc 15323131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 478
Target Start/End: Original strand, 18190115 - 18190215
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctat 469  Q
    |||||| |||||||||||||||||||| ||||| |||||||| ||| ||||        ||||| ||||||||||||||||||||  | ||| |||| ||    
T  18190115 gacacttgtaattacactgaattatgtaattttttcaaattattaggtgtg--------tcagtatccgtgtcgtgtccggtgtccatgtccgtatccat 18190206  T
Q  470 gcttcatag 478  Q
    |||||||||    
T  18190207 gcttcatag 18190215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 370 - 478
Target Start/End: Complemental strand, 18471352 - 18471242
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttct--caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatct 467  Q
    |||||| ||||||| |||||||||||| ||||| |  ||||||| ||||||||||| ||  ||| |||||||||||| |||| | || || ||| |||||    
T  18471352 gacacttgtaattatactgaattatgtgattttttttcaaattattagctgtgtcgacgggtcattgtccgtgtcgtatccgatatccgtgtccatatct 18471253  T
Q  468 atgcttcatag 478  Q
     ||||||||||    
T  18471252 gtgcttcatag 18471242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 18556385 - 18556428
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||||||||||||||||||||||| || |||||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtc 18556428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 382 - 453
Target Start/End: Original strand, 21366039 - 21366110
Alignment:
Q  382 tacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 453  Q
    ||||||||||||||| ||||| | |||||| |||||||| |||||| || |||| |||||||||| ||||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtgccggcgtgtcggtgttcgtgtcgtgttcggtgt 21366110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 446
Target Start/End: Original strand, 23636065 - 23636132
Alignment:
Q  379 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 446  Q
    |||||||||||||||||| |||||||||||||  | || || ||||||| ||| ||||||||||||||    
T  23636065 aattacactgaattatgtaattttctcaaatttttggcggtttcggcgtgtcaatgtccgtgtcgtgt 23636132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 9828175 - 9828125
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||| |||||    
T  9828175 cctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacac 9828125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 424
Target Start/End: Original strand, 40258928 - 40258994
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    ||||| ||||| |||||| |||||||||||||||||||| ||||| |||||||| ||  ||||||||    
T  40258928 gtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcgg 40258994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 40917880 - 40917830
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||||| | |||||||||||||||| |||||||| |||||    
T  40917880 cctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacac 40917830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 377 - 454
Target Start/End: Original strand, 16297297 - 16297374
Alignment:
Q  377 gtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||||||||||| ||| ||||| ||| |||| | ||||||||| ||| ||||| ||||| ||||||||| ||||    
T  16297297 gtaattacactgaattttgtgattttttcatattatttgctgtgtcgacgtgtcagtatccgtatcgtgtccgatgtc 16297374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 364 - 449
Target Start/End: Original strand, 28273089 - 28273174
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||| |||||| |||||||||||||||||| | ||||| |||||| | ||| |||||| || | ||||||||| |||| ||||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtgtccttgtcatgtccg 28273174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 32461393 - 32461442
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||||||||| ||||||||||||| || ||||| |||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacac 32461442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 42359391 - 42359432
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtc 42359432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 358 - 427
Target Start/End: Original strand, 43492489 - 43492558
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    ||||| ||||| ||||| | ||||||||| |||||| || ||||||||||||||||||  ||||||||||    
T  43492489 gtgtctgacaccgacacacataattacaccgaattacgtgattttctcaaattactagtggtgtcggcgt 43492558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 6415016 - 6415080
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    |||||| |||| ||||||| |||||||||||| | ||||  ||||||||| ||||||||||||||    
T  6415016 taattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtgtc 6415080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 446
Target Start/End: Original strand, 16927200 - 16927268
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 446  Q
    ||||||||||||||||| | ||||| |||||||| ||||| || || ||| |||||||| |||||||||    
T  16927200 taattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtcgtgt 16927268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 453
Target Start/End: Complemental strand, 17754352 - 17754280
Alignment:
Q  381 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 453  Q
    |||||||||||||||| ||||| |||||||| |||| ||||||| || |||| ||| ||||||| | ||||||    
T  17754352 ttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgtatacggtgt 17754280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 21365991 - 21366035
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||    
T  21365991 cctatgaagcacggacactcctcggattaggcgtgtctcggtgtc 21366035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 22947850 - 22947806
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||    
T  22947850 cctatgaagcacggacactcctcggattaggcgtgtccaggtgtc 22947806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 411
Target Start/End: Complemental strand, 25361945 - 25361897
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||||   ||||||||||||||||||| ||||||||||||||    
T  25361945 cgacactgacacatataattacactgaattatgtgattttctcaaatta 25361897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 26238129 - 26238173
Alignment:
Q  380 attacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||    
T  26238129 attacactgaattatgttattttctcaaattattagcggtgtcgg 26238173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 377 - 449
Target Start/End: Original strand, 27471580 - 27471652
Alignment:
Q  377 gtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||||||||||||||||||  ||||||||||||| |||| || |||| || |||||||  |||||| |||||    
T  27471580 gtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgtttgtgtcgcgtccg 27471652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 37598952 - 37598916
Alignment:
Q  317 ccctatgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||||||| ||||||||||||||||    
T  37598952 ccctatgaagcacggacactcctcggattaggcgtgt 37598916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 422
Target Start/End: Complemental strand, 40181935 - 40181871
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 422  Q
    ||||||||||| || ||   ||||||||||||||||||| |||||||||||||| |||| |||||    
T  40181935 gtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgtc 40181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 374
Target Start/End: Complemental strand, 42325679 - 42325623
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacac 374  Q
    |||||||||||| |||||| |||| |||||| |||| ||| ||||||||||||||||    
T  42325679 cctatgaagcacagacactcctcgaattaggtgtgtcccgatgtccgacactgacac 42325623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 47989627 - 47989579
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||||||||||||||||| |||||||||||||||| ||| |||| ||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagaca 47989579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 411
Target Start/End: Complemental strand, 3921725 - 3921678
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||| | | |||||| |||||||||||||||||||||||||    
T  3921725 gacactgacacgcatgattacattgaattatgtcattttctcaaatta 3921678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 434
Target Start/End: Complemental strand, 6332729 - 6332659
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtg 434  Q
    |||||| || ||| |||||||||||||||||||| ||||| |||||||| ||| |||||| | |||||||||    
T  6332729 cgacaccgatacttgtaattacactgaattatgtgatttt-tcaaattattagttgtgtccgtgtatcagtg 6332659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 461
Target Start/End: Original strand, 9630635 - 9630678
Alignment:
Q  418 gtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||    
T  9630635 gtgtcggcgtgtcagtgtccgtgttgtgtctggtgtctgtatcc 9630678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 368
Target Start/End: Original strand, 16297223 - 16297270
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||| |||||||||||||||| | |||||| |||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacac 16297270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 368
Target Start/End: Complemental strand, 17778670 - 17778623
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||| |||||||||||||||||| ||| |||||||| |||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacac 17778623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 408
Target Start/End: Original strand, 18946036 - 18946079
Alignment:
Q  365 acactgacactcgtaattacactgaattatgtcattttctcaaa 408  Q
    ||||| |||||||| |||||| ||||||||||||||||||||||    
T  18946036 acactcacactcgtgattacattgaattatgtcattttctcaaa 18946079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 368
Target Start/End: Original strand, 23705422 - 23705469
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||  ||||||||||||||||| ||||| |||||||||||||    
T  23705422 atgaagcacatacacttctcggattaggtgtgttgcggtgtccgacac 23705469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 425
Target Start/End: Original strand, 25098570 - 25098617
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggc 425  Q
    ||||||||||||||||||| ||||||||||||||  ||| ||||||||    
T  25098570 taattacactgaattatgtgattttctcaaattatcagcggtgtcggc 25098617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 27965940 - 27965983
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtc 27965983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 34712383 - 34712462
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||||   |||||||||| |||||||| |||||||||||||| |||| ||| ||| || | | ||||||||||    
T  34712383 cgacactgacacatataattacactaaattatgttattttctcaaattattagcagtgacggtgtgttaatgtccgtgtc 34712462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 461
Target Start/End: Original strand, 39130762 - 39130865
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 457  Q
    ||||||||||| |||||   |||||||||| |||||| | ||||||| |||||| ||   ||||| |||| ||| | ||| |||||||||||||||| ||    
T  39130762 gtgtccgacaccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgt 39130861  T
Q  458 atcc 461  Q
    ||||    
T  39130862 atcc 39130865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 369
Target Start/End: Original strand, 48632322 - 48632373
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacact 369  Q
    |||||||||||||||||| ||| ||| |||||||||  ||||||||||||||    
T  48632322 cctatgaagcacggacacctctaggactaggcgtgtcgcggtgtccgacact 48632373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 6427595 - 6427545
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||||  || |||||||||||| |||||||| |||||    
T  6427595 cctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacac 6427545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 15765878 - 15765828
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||||  ||||||||||||||| || ||||| |||||    
T  15765878 cctatgaagcacggacactcttcggattaggcgtgtcccagtgtcagacac 15765828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 353
Target Start/End: Original strand, 22515827 - 22515861
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||||||||| ||||||||||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgt 22515861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 424
Target Start/End: Complemental strand, 23738722 - 23738676
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    ||||| ||||||||||||| ||||| |||||||| ||||||||||||    
T  23738722 taattgcactgaattatgtgattttttcaaattattagctgtgtcgg 23738676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 424
Target Start/End: Original strand, 40747788 - 40747834
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcgg 424  Q
    |||||||| ||||||||||||||||||||||||| || | |||||||    
T  40747788 taattacattgaattatgtcattttctcaaattattatccgtgtcgg 40747834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 411
Target Start/End: Complemental strand, 42325601 - 42325571
Alignment:
Q  381 ttacactgaattatgtcattttctcaaatta 411  Q
    |||||||||||||||||||||||||||||||    
T  42325601 ttacactgaattatgtcattttctcaaatta 42325571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 362
Target Start/End: Original strand, 1486646 - 1486687
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||| |||||| |||||||||||||||| ||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtc 1486687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 436
Target Start/End: Original strand, 10474997 - 10475050
Alignment:
Q  383 acactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    |||||||||||||| |||||||||| ||| |||| |||||||||| ||| ||||    
T  10474997 acactgaattatgtgattttctcaagttattagcggtgtcggcgtgtcaatgtc 10475050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 384 - 461
Target Start/End: Complemental strand, 16812581 - 16812504
Alignment:
Q  384 cactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||||||||||| ||||| |||||||| ||   ||||||| || |||||||||||||| |||   ||||||||||||    
T  16812581 cactgaattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccgtgtcatgtttagtgtctgtatcc 16812504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 451
Target Start/End: Original strand, 22794093 - 22794166
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggt 451  Q
    ||||||||||| ||||||||||||| |||||||| || | |||| | ||| ||||||||  |||||| ||||||    
T  22794093 taattacactgtattatgtcattttttcaaattattatccgtgttgacgtgtcagtgtctatgtcgtatccggt 22794166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 354
Target Start/End: Complemental strand, 23622424 - 23622391
Alignment:
Q  321 atgaagcacggacacttctcggattaggcgtgtt 354  Q
    ||||||||| ||||||||||||||||||||||||    
T  23622424 atgaagcaccgacacttctcggattaggcgtgtt 23622391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 478
Target Start/End: Original strand, 41597520 - 41597585
Alignment:
Q  413 tagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 478  Q
    ||||||||| ||||| || |||||||||||||||  |||||| |||||| ||||  ||||||||||    
T  41597520 tagctgtgttggcgtgtcggtgtccgtgtcgtgtttggtgtccgtatccgtatccgtgcttcatag 41597585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 411
Target Start/End: Complemental strand, 44482274 - 44482241
Alignment:
Q  378 taattacactgaattatgtcattttctcaaatta 411  Q
    ||||||||||||||||||| ||||||||||||||    
T  44482274 taattacactgaattatgtgattttctcaaatta 44482241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 5944413 - 5944365
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||||||||||| ||||| |||||||||||||| | |||||||| ||||    
T  5944413 ctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggaca 5944365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 7918153 - 7918197
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||||||||||||||||| ||||||||||| |||| | ||||||    
T  7918153 cctatgaagcacggacactcctcggattaggtgtgtcctggtgtc 7918197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 379 - 427
Target Start/End: Complemental strand, 9828087 - 9828039
Alignment:
Q  379 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    |||||||||||||||||| ||||| |||||||| |||  ||||||||||    
T  9828087 aattacactgaattatgtgattttatcaaattattagtggtgtcggcgt 9828039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 16812675 - 16812635
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggt 359  Q
    |||||||||||||||||| ||| |||||||||||| |||||    
T  16812675 ctatgaagcacggacactcctcagattaggcgtgtcccggt 16812635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #118
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 475
Target Start/End: Original strand, 23531734 - 23531890
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 418  Q
    |||||||||||| ||||| ||| ||||| ||||||| | ||||| ||| |  ||| |  |||||||| |||||||||| || || |||||||| |||| |    
T  23531734 ctatgaagcacgaacactcctccgattaagcgtgtttcagtgtcggacgcgaacatttataattacattgaattatgtgatattttcaaattattagcag 23531833  T
Q  419 tgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttca 475  Q
    | | |  || || |||||||| |||||||| ||||| || ||| ||||  |||||||    
T  23531834 tattgaagtgtcggtgtccgtatcgtgtccagtgtccgtgtccgtatccgtgcttca 23531890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #119
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 442
Target Start/End: Original strand, 32724113 - 32724177
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    |||||||| | |||||||| | |||||||||||| || |  ||||||||||||||||| ||||||    
T  32724113 taattacattaaattatgtaaatttctcaaattattaacgatgtcggcgtatcagtgttcgtgtc 32724177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #120
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 367
Target Start/End: Complemental strand, 32900010 - 32899962
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||||||||| ||||| | ||||||||||| |||| |||||||||||||    
T  32900010 ctatgaagcaaggacaatcctcggattaggggtgtcccggtgtccgaca 32899962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #121
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 317 - 353
Target Start/End: Complemental strand, 34741967 - 34741931
Alignment:
Q  317 ccctatgaagcacggacacttctcggattaggcgtgt 353  Q
    ||||||||||||||||||||  |||||||||||||||    
T  34741967 ccctatgaagcacggacactcttcggattaggcgtgt 34741931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #122
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 358 - 442
Target Start/End: Complemental strand, 52903313 - 52903229
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||| |||||   ||||||||||||||||| | ||||| | |||||| || | || ||||||| | ||||||||||||    
T  52903313 gtgtccgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtgtc 52903229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 364 - 454
Target Start/End: Original strand, 178819 - 178910
Alignment:
Q  364 gacactgacactcgtaattacactgaattatg-tcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||||||| ||||||||||||||||||| | ||||| |||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  178819 gacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 178910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 370 - 447
Target Start/End: Original strand, 192256 - 192333
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    |||||| |||||||||| ||||||||| |||||||||||||| || | |||||||||| ||||||||||| |||||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgtatcgtgtc 192333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 363 - 454
Target Start/End: Complemental strand, 241653 - 241562
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| ||||||| |||||||||| |||||||| |||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  241653 cgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 241562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 368
Target Start/End: Complemental strand, 241724 - 241675
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 241675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 370 - 478
Target Start/End: Complemental strand, 130534 - 130426
Alignment:
Q  370 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctat 469  Q
    |||||| |||||||||||||||||||| ||||| ||||| || || |||||||||| | ||| |||||||||||||||||||||| || ||| |||| ||    
T  130534 gacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccat 130435  T
Q  470 gcttcatag 478  Q
    |||||||||    
T  130434 gcttcatag 130426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 378 - 454
Target Start/End: Original strand, 225283 - 225359
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||||| || |||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||    
T  225283 taattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 225359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 362 - 461
Target Start/End: Complemental strand, 13460 - 13361
Alignment:
Q  362 ccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||||| ||| || |||||| ||||||||||||| |||||||||||||| ||| ||||||||||| |||||||||||||| | ||||||||| ||||||    
T  13460 ccgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatcc 13361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 362 - 461
Target Start/End: Original strand, 21867 - 21966
Alignment:
Q  362 ccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||||| ||| || |||||| ||||||||||||| |||||||||||||| ||| ||||||||||| |||||||||||||| | ||||||||| ||||||    
T  21867 ccgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatcc 21966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 53; Significance: 4e-21; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 367 - 439
Target Start/End: Complemental strand, 92862 - 92790
Alignment:
Q  367 actgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 439  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| |||| |||||||||| |||||||||||    
T  92862 actgacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 320 - 367
Target Start/End: Complemental strand, 92940 - 92893
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    ||||||||||||||||| |||||||||||||||| | |||||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgaca 92893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 435
Target Start/End: Complemental strand, 123731 - 123612
Alignment:
Q  320 tatgaagcacggacacttctcggattaggcgtgttccggtgtcc-gacactgacactcgtaattacactgaattatgtca---ttttctcaaattactag 415  Q
    |||||||||  || ||| |||||||||||||||| | | |||   ||||| |||||| |||||||||||||||||||| |   |||| | |||||| |||    
T  123731 tatgaagcatagatactcctcggattaggcgtgtcctgatgttaagacaccgacacttgtaattacactgaattatgtgattctttttttaaattattag 123632  T
Q  416 ctgtgtcggcgtatcagtgt 435  Q
    |||||| ||||| |||||||    
T  123631 ctgtgttggcgtgtcagtgt 123612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 371 - 442
Target Start/End: Complemental strand, 51862 - 51791
Alignment:
Q  371 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 51791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 342 - 451
Target Start/End: Complemental strand, 63853 - 63743
Alignment:
Q  342 gattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtg-tcggcgtatcagtgtccgtg 440  Q
    ||||||| ||||||||||||| ||||| |||||| |||||| ||||||||||||| |||||||||||||| |||| ||| | | ||| ||| ||||||||    
T  63853 gattaggtgtgttccggtgtctgacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcggtgttagacgtgtcattgtccgtg 63754  T
Q  441 tcgtgtccggt 451  Q
    |||| ||||||    
T  63753 tcgtatccggt 63743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 411
Target Start/End: Complemental strand, 56981 - 56933
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaatta 411  Q
    |||||||||||||  | ||||||||||||||| ||||||||||||||||    
T  56981 cgacactgacacttatgattacactgaattatatcattttctcaaatta 56933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 363 - 447
Target Start/End: Original strand, 3849 - 3933
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 447  Q
    ||||||||||||| |||||||||||||||||||| ||||| | |||||| || | |||||||| |||||||||| ||||||||||    
T  3849 cgacactgacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtcgtgtc 3933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 3776 - 3812
Alignment:
Q  317 ccctatgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  3776 ccctatgaagcaaggacactcctcggattaggcgtgt 3812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 7027 - 7108
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 439  Q
    |||||||||||  ||||| ||||||| ||| |||||||| ||||| |||||||| ||||||||||| |||||||||||||||    
T  7027 gtgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgtatcagtgtccgt 7108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 363 - 467
Target Start/End: Original strand, 263372 - 263476
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 462  Q
    |||||||||||||  |||||||||||||||||||  ||||||||||||| |||| |||| | | | |||||||||||||||| ||| ||||| || |||     
T  263372 cgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgtatccagtgtccgtgtccg 263471  T
Q  463 tatct 467  Q
    |||||    
T  263472 tatct 263476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 449
Target Start/End: Complemental strand, 19626 - 19549
Alignment:
Q  371 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    ||||| |||||||||||||||||||| ||||| |||||||| ||| ||| ||||||| |||||||| ||||||||||||    
T  19626 acacttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccg 19549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 363 - 436
Target Start/End: Complemental strand, 71784 - 71709
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtca--ttttctcaaattactagctgtgtcggcgtatcagtgtc 436  Q
    ||||||||||||| |||||||||||||||| ||| |  |||| |||||||| ||||||||||||||| ||||||||    
T  71784 cgacactgacactagtaattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgtgtcagtgtc 71709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 71856 - 71806
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||| |||||| |||||||||| ||||| |||||||| |||||    
T  71856 cctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacac 71806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 461
Target Start/End: Original strand, 135263 - 135410
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc-----cgacactgacactcgtaattacactgaattatgtcattttctcaaattact 413  Q
    |||||||||||| ||||  ||| |||||||||||| | ||||||     |||||| |||||   ||||||||| ||||||||| |||||||||||||| |    
T  135263 ctatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggacacgacaccgacacatataattacacagaattatgtgattttctcaaattatt 135362  T
Q  414 agctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||| ||||||| || |  ||||| ||||||| | ||||||| ||||||    
T  135363 agcagtgtcggtgtgttggtgtctgtgtcgtattcggtgtccgtatcc 135410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 449
Target Start/End: Complemental strand, 23479 - 23393
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||||| ||||||  ||||||||||||||||||| ||||| |  | ||| || |||||||||||| |||||||| ||||||||||||    
T  23479 cgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccg 23393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 449
Target Start/End: Complemental strand, 23570 - 23483
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtca-ttttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 449  Q
    |||||||||||||  ||||||||||||||||||| | |||| | || ||| || ||||||||| || |||||||  ||||||||||||    
T  23570 cgacactgacacttataattacactgaattatgtgattttttttaagttattaactgtgtcggtgtgtcagtgtatgtgtcgtgtccg 23483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 377 - 427
Target Start/End: Original strand, 33377 - 33427
Alignment:
Q  377 gtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    |||||||||||||||||||| ||||| |||||||| |||||||||||||||    
T  33377 gtaattacactgaattatgttattttttcaaattattagctgtgtcggcgt 33427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 479
Target Start/End: Complemental strand, 9942 - 9841
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 477  Q
    ||||||||||| ||| | | ||||||| |||  | ||||||||||||||| || |||||| |||||||||||||||| || ||| ||||  |||||||||    
T  9942 taattacactgcattttatgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcata 9843  T
Q  478 gg 479  Q
    ||    
T  9842 gg 9841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 358 - 423
Target Start/End: Complemental strand, 70342 - 70277
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcg 423  Q
    ||||||||||| ||||||  ||||||||||||||||||| ||||| |||||||| || ||||||||    
T  70342 gtgtccgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcg 70277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 372 - 427
Target Start/End: Complemental strand, 14580 - 14525
Alignment:
Q  372 cactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    |||| |||||||||||||||||||| ||||| |||||||| ||| |||||||||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgt 14525  T

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Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 363 - 454
Target Start/End: Complemental strand, 8725 - 8634
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| ||||||  |||||| |||||| ||||| ||||||  |||||| |||  |||||| ||| ||||||||| ||||||||||||||||    
T  8725 cgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtccggtgtc 8634  T

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Target: scaffold0122; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 427
Target Start/End: Complemental strand, 8073 - 8005
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    ||||||||||| ||||||  ||||||||||| ||||| | ||||| |||||||| ||| |||||||||||    
T  8073 gtgtccgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgt 8005  T

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Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 3058 - 3015
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 362  Q
    ||||| |||||||||||| |||||||||||||||||||||||||    
T  3058 ctatggagcacggacactcctcggattaggcgtgttccggtgtc 3015  T

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Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 453
Target Start/End: Complemental strand, 53224 - 53153
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 453  Q
    ||||||||||||||||||| |||||||||||||| | || || ||||||| ||||    |||||||||||||||||    
T  53224 taattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcag----cgtgtcgtgtccggtgt 53153  T

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Target: scaffold0598 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 8071 - 8132
Alignment:
Q  381 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 442  Q
    ||||||||||||||||||||||||||||||| || | || ||| ||| || |||||||||||    
T  8071 ttacactgaattatgtcattttctcaaattattatccgtatcgacgtgtcggtgtccgtgtc 8132  T

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Target: scaffold0475 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 3428 - 3383
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgttccggtgtcc 363  Q
    ||||||||||||||||||| |||||||||||||||| || ||||||    
T  3428 cctatgaagcacggacactcctcggattaggcgtgtcccagtgtcc 3383  T

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Target: scaffold1528 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 453
Target Start/End: Complemental strand, 1076 - 1004
Alignment:
Q  381 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 453  Q
    |||||||||||||||| ||||| |||||||| |||| ||||||| || |||| ||| ||||||| | ||||||    
T  1076 ttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgtatacggtgt 1004  T

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Target: scaffold0793 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 367
Target Start/End: Original strand, 4821 - 4869
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 367  Q
    |||||||||||||||||| |||||||||||||||| || ||||| ||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 4869  T

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Target: scaffold0793; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 461
Target Start/End: Original strand, 4891 - 4981
Alignment:
Q  371 acactcgtaattacactgaattatgtca-ttttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 461  Q
    ||||| |||||||||||||||||||| | |||| | |||||| |||||||||||| || | || ||  ||||||||||| ||||||||||||    
T  4891 acacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttagagtatgtgtcgtgtcc-gtgtctgtatcc 4981  T

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Target: scaffold0168 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 454
Target Start/End: Complemental strand, 21087 - 21011
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 454  Q
    |||||| || || |||||| |||||||||||||| || | ||||| || | ||||||||||||||||||| ||||||    
T  21087 taattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtc 21011  T

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Target: scaffold0168; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 21150 - 21115
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgt 353  Q
    ||||||||||||||| ||||||||||||||||||||    
T  21150 cctatgaagcacggatacttctcggattaggcgtgt 21115  T

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Target: scaffold0168; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 353
Target Start/End: Complemental strand, 21408 - 21373
Alignment:
Q  318 cctatgaagcacggacacttctcggattaggcgtgt 353  Q
    |||||||||||| |||||||||||||||||||||||    
T  21408 cctatgaagcacagacacttctcggattaggcgtgt 21373  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 427
Target Start/End: Original strand, 17750 - 17813
Alignment:
Q  364 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 427  Q
    ||||| |||||| ||||||||||| |||||||| ||||| |||||||| ||| |||||| ||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgt 17813  T

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Target: scaffold0083 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 396
Target Start/End: Original strand, 45525 - 45563
Alignment:
Q  358 gtgtccgacactgacactcgtaattacactgaattatgt 396  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  45525 gtgtccgacaccgacacttgtaattacactgaattatgt 45563  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 448
Target Start/End: Complemental strand, 90887 - 90817
Alignment:
Q  378 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 448  Q
    ||||||||||||||||| | |||||||||||||| ||   |||| || || |||||||| |||||||||||    
T  90887 taattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtcgtgtcc 90817  T

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Target: scaffold0450 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 8564 - 8613
Alignment:
Q  319 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 368  Q
    |||||||||||||||||| |||| ||||||||||| || ||||| |||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacac 8613  T

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Target: scaffold0123 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 378 - 410
Target Start/End: Original strand, 44540 - 44572
Alignment:
Q  378 taattacactgaattatgtcattttctcaaatt 410  Q
    ||||||||||||||||||| |||||||||||||    
T  44540 taattacactgaattatgtgattttctcaaatt 44572  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 363 - 438
Target Start/End: Complemental strand, 23829 - 23753
Alignment:
Q  363 cgacactgacactcgtaattacactgaattatgtca-ttttctcaaattactagctgtgtcggcgtatcagtgtccg 438  Q
    |||||| |||||| |||||||||||||||||||| | |||| |||||||| || ||||| | | || ||||||||||    
T  23829 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtgacagtgtgtcagtgtccg 23753  T

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