View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17957_high_3 (Length: 210)

Name: NF17957_high_3
Description: NF17957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17957_high_3
NF17957_high_3
[»] chr7 (47 HSPs)
chr7 (90-210)||(44915197-44915317)
chr7 (90-210)||(2057397-2057517)
chr7 (90-210)||(40110774-40110895)
chr7 (90-210)||(29065856-29065976)
chr7 (90-210)||(34388302-34388422)
chr7 (90-210)||(49052788-49052907)
chr7 (90-209)||(40854007-40854127)
chr7 (90-210)||(5644714-5644834)
chr7 (90-210)||(43955554-43955671)
chr7 (90-210)||(43955519-43955636)
chr7 (90-163)||(5644679-5644752)
chr7 (90-163)||(29065821-29065894)
chr7 (90-210)||(40110739-40110860)
chr7 (94-163)||(21635969-21636038)
chr7 (90-163)||(35776939-35777012)
chr7 (90-210)||(46069428-46069545)
chr7 (90-210)||(21635887-21636007)
chr7 (90-161)||(6498751-6498822)
chr7 (90-163)||(26162121-26162194)
chr7 (90-163)||(31632724-31632797)
chr7 (90-210)||(2057432-2057552)
chr7 (92-163)||(23455231-23455302)
chr7 (90-160)||(9784918-9784988)
chr7 (81-163)||(28539152-28539234)
chr7 (90-163)||(23548595-23548668)
chr7 (90-157)||(34398938-34399006)
chr7 (90-210)||(46481983-46482102)
chr7 (90-145)||(29195711-29195766)
chr7 (88-162)||(22391572-22391646)
chr7 (90-163)||(18789230-18789303)
chr7 (90-163)||(39342626-39342699)
chr7 (118-163)||(46069421-46069466)
chr7 (90-162)||(25189211-25189283)
chr7 (119-210)||(49052822-49052913)
chr7 (92-162)||(30629061-30629131)
chr7 (163-209)||(32650611-32650657)
chr7 (114-160)||(43791116-43791162)
chr7 (90-163)||(14603246-14603319)
chr7 (90-163)||(35455806-35455879)
chr7 (90-162)||(30524257-30524329)
chr7 (150-209)||(31913256-31913315)
chr7 (90-210)||(34388267-34388387)
chr7 (92-155)||(15990895-15990958)
chr7 (163-209)||(14790151-14790197)
chr7 (90-163)||(29639199-29639272)
chr7 (107-163)||(3905643-3905699)
chr7 (114-162)||(6498669-6498717)
[»] chr5 (60 HSPs)
chr5 (90-210)||(15373962-15374082)
chr5 (90-210)||(32390009-32390129)
chr5 (90-210)||(9764375-9764495)
chr5 (90-210)||(20523135-20523255)
chr5 (90-210)||(40809343-40809463)
chr5 (90-210)||(2316415-2316535)
chr5 (114-210)||(32470919-32471015)
chr5 (87-210)||(32389971-32390094)
chr5 (90-210)||(15373997-15374117)
chr5 (90-210)||(23091999-23092119)
chr5 (90-210)||(9764340-9764460)
chr5 (90-210)||(32470884-32471004)
chr5 (126-210)||(40643856-40643939)
chr5 (90-161)||(2721557-2721628)
chr5 (92-183)||(16515009-16515099)
chr5 (90-163)||(37722889-37722962)
chr5 (90-166)||(15804324-15804400)
chr5 (90-162)||(19533903-19533975)
chr5 (90-202)||(20523178-20523290)
chr5 (90-162)||(22303866-22303938)
chr5 (90-210)||(2316380-2316501)
chr5 (90-163)||(3563279-3563352)
chr5 (90-163)||(16515102-16515175)
chr5 (90-163)||(26281264-26281337)
chr5 (90-163)||(40090409-40090482)
chr5 (90-194)||(6634017-6634120)
chr5 (90-177)||(28828417-28828504)
chr5 (90-209)||(40643856-40643974)
chr5 (90-163)||(22766954-22767027)
chr5 (106-163)||(23091980-23092037)
chr5 (90-163)||(25935285-25935358)
chr5 (159-210)||(3563314-3563365)
chr5 (88-162)||(37145497-37145571)
chr5 (90-163)||(927304-927377)
chr5 (89-142)||(28828368-28828421)
chr5 (90-163)||(41762210-41762283)
chr5 (91-163)||(6634098-6634170)
chr5 (92-163)||(9894317-9894388)
chr5 (163-210)||(22766989-22767036)
chr5 (90-143)||(15804398-15804451)
chr5 (90-163)||(20320643-20320716)
chr5 (173-210)||(26281265-26281302)
chr5 (90-163)||(32250093-32250165)
chr5 (90-163)||(33245367-33245440)
chr5 (98-142)||(13243469-13243513)
chr5 (90-210)||(40809378-40809498)
chr5 (90-133)||(5658778-5658821)
chr5 (90-161)||(34982218-34982288)
chr5 (163-209)||(22305132-22305178)
chr5 (172-209)||(2550348-2550385)
chr5 (90-135)||(13243516-13243561)
chr5 (89-162)||(14834825-14834898)
chr5 (160-209)||(15270837-15270886)
chr5 (160-209)||(17542344-17542393)
chr5 (126-163)||(22305132-22305169)
chr5 (126-162)||(2550348-2550384)
chr5 (174-210)||(2721557-2721593)
chr5 (90-162)||(11601042-11601113)
chr5 (126-162)||(12064464-12064500)
chr5 (90-162)||(35379346-35379417)
[»] chr3 (49 HSPs)
chr3 (90-210)||(44692859-44692979)
chr3 (90-210)||(9129381-9129501)
chr3 (90-210)||(9137488-9137608)
chr3 (90-209)||(46429434-46429553)
chr3 (90-209)||(27251932-27252051)
chr3 (90-210)||(5415785-5415905)
chr3 (121-210)||(44436295-44436384)
chr3 (94-209)||(28092220-28092335)
chr3 (107-210)||(31070443-31070546)
chr3 (126-209)||(332012-332096)
chr3 (90-205)||(47284268-47284383)
chr3 (90-179)||(39110396-39110485)
chr3 (90-163)||(46672800-46672873)
chr3 (90-210)||(5415820-5415940)
chr3 (90-162)||(42005951-42006023)
chr3 (90-210)||(44436260-44436380)
chr3 (90-210)||(44692824-44692944)
chr3 (126-209)||(25655335-25655418)
chr3 (90-205)||(39215880-39215995)
chr3 (90-210)||(9129346-9129466)
chr3 (90-210)||(9137453-9137573)
chr3 (90-162)||(47767434-47767506)
chr3 (90-163)||(7302348-7302421)
chr3 (106-163)||(31070424-31070481)
chr3 (90-163)||(49457345-49457418)
chr3 (90-162)||(37054396-37054468)
chr3 (92-163)||(21307529-21307600)
chr3 (106-163)||(30766571-30766628)
chr3 (90-163)||(34088573-34088646)
chr3 (90-163)||(36397986-36398059)
chr3 (90-163)||(53129840-53129913)
chr3 (107-163)||(7976567-7976623)
chr3 (96-163)||(19475824-19475891)
chr3 (90-163)||(48947607-48947680)
chr3 (90-162)||(53470427-53470499)
chr3 (137-210)||(46672771-46672838)
chr3 (90-163)||(37321552-37321625)
chr3 (90-162)||(31189395-31189467)
chr3 (90-210)||(42130694-42130814)
chr3 (91-163)||(52527039-52527111)
chr3 (126-209)||(25655335-25655418)
chr3 (92-135)||(35279927-35279970)
chr3 (167-210)||(49457380-49457423)
chr3 (94-152)||(44288467-44288525)
chr3 (106-163)||(671616-671673)
chr3 (173-210)||(27251979-27252016)
chr3 (173-210)||(37321587-37321624)
chr3 (173-209)||(332012-332048)
chr3 (90-142)||(46001366-46001418)
[»] chr2 (46 HSPs)
chr2 (90-210)||(784795-784915)
chr2 (90-209)||(14537201-14537320)
chr2 (90-210)||(14365702-14365821)
chr2 (90-182)||(11716410-11716502)
chr2 (90-210)||(41461517-41461637)
chr2 (126-209)||(11824718-11824801)
chr2 (126-210)||(10244214-10244298)
chr2 (90-210)||(14954268-14954389)
chr2 (126-209)||(3345783-3345867)
chr2 (90-210)||(14365737-14365856)
chr2 (81-163)||(41461599-41461681)
chr2 (90-163)||(17180299-17180372)
chr2 (90-163)||(27033492-27033565)
chr2 (88-163)||(11532251-11532326)
chr2 (90-163)||(784877-784950)
chr2 (90-163)||(11793897-11793970)
chr2 (90-163)||(45094469-45094542)
chr2 (126-182)||(11684655-11684711)
chr2 (150-210)||(27033527-27033587)
chr2 (96-162)||(30698289-30698355)
chr2 (90-163)||(10480121-10480194)
chr2 (90-163)||(17905656-17905729)
chr2 (114-162)||(7167666-7167714)
chr2 (90-162)||(7228011-7228083)
chr2 (90-163)||(769038-769111)
chr2 (90-163)||(1583807-1583880)
chr2 (90-163)||(13017781-13017854)
chr2 (90-163)||(33189255-33189328)
chr2 (90-171)||(44256183-44256263)
chr2 (90-162)||(11141307-11141379)
chr2 (92-142)||(11684603-11684653)
chr2 (90-163)||(3092284-3092357)
chr2 (90-163)||(35047677-35047750)
chr2 (106-163)||(40026082-40026139)
chr2 (90-162)||(10244179-10244251)
chr2 (94-162)||(11606719-11606787)
chr2 (91-163)||(28740599-28740671)
chr2 (88-132)||(29279048-29279092)
chr2 (115-163)||(32839646-32839694)
chr2 (96-142)||(11716504-11716550)
chr2 (121-163)||(14954351-14954393)
chr2 (117-162)||(11594837-11594882)
chr2 (173-210)||(11716445-11716482)
chr2 (90-163)||(39630227-39630299)
chr2 (173-209)||(11684675-11684711)
chr2 (126-162)||(32840191-32840227)
[»] chr1 (56 HSPs)
chr1 (90-210)||(15034696-15034816)
chr1 (90-209)||(23536069-23536188)
chr1 (90-210)||(4038077-4038197)
chr1 (90-209)||(27935523-27935642)
chr1 (92-210)||(27804269-27804387)
chr1 (81-209)||(40264068-40264196)
chr1 (90-210)||(50005116-50005236)
chr1 (126-210)||(5474437-5474521)
chr1 (90-210)||(15034661-15034781)
chr1 (90-190)||(30190193-30190293)
chr1 (90-210)||(34756464-34756584)
chr1 (90-209)||(32572960-32573079)
chr1 (93-210)||(28745834-28745950)
chr1 (90-210)||(38277452-38277571)
chr1 (126-210)||(45565431-45565515)
chr1 (90-162)||(38277417-38277489)
chr1 (91-209)||(45565397-45565515)
chr1 (112-209)||(37214843-37214939)
chr1 (90-210)||(4038112-4038232)
chr1 (37-88)||(5458299-5458350)
chr1 (138-209)||(17502230-17502301)
chr1 (93-163)||(34756432-34756502)
chr1 (90-163)||(8224770-8224843)
chr1 (90-163)||(26501077-26501150)
chr1 (90-210)||(27804302-27804422)
chr1 (152-209)||(15245480-15245537)
chr1 (90-163)||(24273218-24273291)
chr1 (90-163)||(50005081-50005154)
chr1 (97-163)||(37448399-37448465)
chr1 (90-163)||(28632584-28632656)
chr1 (90-163)||(47165210-47165283)
chr1 (90-162)||(43622977-43623049)
chr1 (107-163)||(44570697-44570753)
chr1 (90-160)||(32287934-32288004)
chr1 (130-176)||(47074177-47074223)
chr1 (90-163)||(6470684-6470757)
chr1 (90-171)||(25889160-25889240)
chr1 (106-163)||(37447900-37447957)
chr1 (90-163)||(49659219-49659291)
chr1 (91-163)||(37036947-37037019)
chr1 (90-210)||(44410348-44410468)
chr1 (91-163)||(51847855-51847926)
chr1 (100-163)||(31195468-31195531)
chr1 (118-163)||(5474483-5474528)
chr1 (90-163)||(31166312-31166385)
chr1 (90-163)||(39887129-39887202)
chr1 (90-163)||(44410313-44410386)
chr1 (126-210)||(23536104-23536188)
chr1 (90-210)||(28745799-28745918)
chr1 (90-153)||(946378-946440)
chr1 (163-210)||(47165201-47165248)
chr1 (163-206)||(50471791-50471834)
chr1 (90-140)||(10166501-10166551)
chr1 (106-163)||(29446768-29446824)
chr1 (126-163)||(32572960-32572997)
chr1 (118-162)||(47541987-47542031)
[»] chr4 (51 HSPs)
chr4 (90-210)||(1107053-1107174)
chr4 (90-210)||(857276-857396)
chr4 (90-205)||(41498532-41498647)
chr4 (81-209)||(11040961-11041088)
chr4 (90-210)||(28845908-28846028)
chr4 (90-210)||(7352849-7352969)
chr4 (90-210)||(10127976-10128096)
chr4 (90-209)||(26250911-26251030)
chr4 (90-183)||(49111376-49111469)
chr4 (90-210)||(15660185-15660305)
chr4 (141-209)||(12914051-12914119)
chr4 (90-162)||(14982282-14982354)
chr4 (130-210)||(14982317-14982396)
chr4 (147-210)||(36455944-36456007)
chr4 (90-163)||(15660267-15660340)
chr4 (93-210)||(28845876-28845993)
chr4 (90-210)||(42844580-42844700)
chr4 (87-210)||(7352811-7352934)
chr4 (90-163)||(4896716-4896789)
chr4 (96-162)||(1539649-1539715)
chr4 (90-160)||(16516173-16516243)
chr4 (90-163)||(36455909-36455982)
chr4 (90-163)||(36456010-36456083)
chr4 (106-163)||(42844561-42844618)
chr4 (90-162)||(1112607-1112679)
chr4 (90-162)||(31473851-31473923)
chr4 (115-210)||(857266-857361)
chr4 (91-162)||(10633035-10633106)
chr4 (90-171)||(467879-467958)
chr4 (90-163)||(2125859-2125932)
chr4 (90-163)||(10128058-10128131)
chr4 (90-210)||(1107089-1107209)
chr4 (126-179)||(4441396-4441449)
chr4 (90-135)||(31742876-31742921)
chr4 (165-210)||(55266852-55266897)
chr4 (90-142)||(4441339-4441391)
chr4 (90-162)||(55266860-55266932)
chr4 (90-157)||(11348327-11348394)
chr4 (90-156)||(4896650-4896716)
chr4 (94-163)||(1112706-1112775)
chr4 (90-159)||(5715746-5715815)
chr4 (90-163)||(35470124-35470197)
chr4 (90-135)||(42542979-42543024)
chr4 (115-163)||(29091164-29091212)
chr4 (163-210)||(1539678-1539725)
chr4 (88-135)||(9451158-9451205)
chr4 (163-210)||(31473886-31473933)
chr4 (90-157)||(31742778-31742845)
chr4 (112-163)||(46242542-46242593)
chr4 (173-210)||(4896717-4896754)
chr4 (126-163)||(26250993-26251030)
[»] chr8 (49 HSPs)
chr8 (90-210)||(17110871-17110991)
chr8 (90-210)||(13404829-13404949)
chr8 (87-209)||(30435245-30435365)
chr8 (90-210)||(3853653-3853773)
chr8 (90-210)||(3858111-3858231)
chr8 (126-210)||(14799999-14800082)
chr8 (90-210)||(17110906-17111026)
chr8 (90-163)||(24044962-24045035)
chr8 (90-163)||(3853618-3853691)
chr8 (90-163)||(3858076-3858149)
chr8 (90-162)||(28324671-28324743)
chr8 (113-210)||(33902704-33902801)
chr8 (90-153)||(33902669-33902732)
chr8 (90-161)||(40046806-40046877)
chr8 (90-165)||(42711362-42711437)
chr8 (90-163)||(44889356-44889429)
chr8 (150-210)||(4156229-4156289)
chr8 (130-209)||(42739969-42740048)
chr8 (90-168)||(37268086-37268164)
chr8 (90-163)||(4156251-4156324)
chr8 (90-163)||(11744727-11744800)
chr8 (126-207)||(38573433-38573514)
chr8 (106-162)||(13404912-13404968)
chr8 (90-162)||(14800045-14800117)
chr8 (91-163)||(35979012-35979084)
chr8 (90-162)||(36103103-36103175)
chr8 (90-163)||(23011736-23011809)
chr8 (90-163)||(29257359-29257432)
chr8 (90-163)||(29482815-29482888)
chr8 (90-163)||(33377305-33377378)
chr8 (90-162)||(515541-515613)
chr8 (92-163)||(44346686-44346757)
chr8 (94-152)||(8689138-8689196)
chr8 (173-210)||(32626028-32626065)
chr8 (90-162)||(14241-14312)
chr8 (106-162)||(8049272-8049328)
chr8 (90-162)||(33986006-33986078)
chr8 (90-141)||(27322679-27322730)
chr8 (106-165)||(40046872-40046931)
chr8 (93-163)||(9982642-9982711)
chr8 (163-209)||(29611408-29611454)
chr8 (90-148)||(31807411-31807468)
chr8 (172-209)||(7202885-7202922)
chr8 (90-135)||(14991694-14991739)
chr8 (120-165)||(32626023-32626068)
chr8 (90-135)||(32626070-32626115)
chr8 (90-123)||(36625255-36625288)
chr8 (126-162)||(7202885-7202921)
chr8 (162-210)||(11744717-11744765)
[»] scaffold1562 (2 HSPs)
scaffold1562 (90-210)||(442-562)
scaffold1562 (90-210)||(407-527)
[»] scaffold1158 (2 HSPs)
scaffold1158 (90-210)||(2031-2151)
scaffold1158 (90-210)||(2066-2186)
[»] chr6 (21 HSPs)
chr6 (90-210)||(6919710-6919829)
chr6 (90-210)||(9763049-9763169)
chr6 (90-210)||(776082-776202)
chr6 (126-210)||(9285684-9285768)
chr6 (90-209)||(9285649-9285768)
chr6 (92-162)||(15299510-15299579)
chr6 (90-163)||(9763014-9763087)
chr6 (90-163)||(29889432-29889505)
chr6 (90-163)||(34244978-34245051)
chr6 (90-210)||(6919745-6919864)
chr6 (90-162)||(28918167-28918239)
chr6 (112-210)||(776117-776215)
chr6 (90-162)||(13487277-13487349)
chr6 (115-163)||(34364770-34364818)
chr6 (105-160)||(15299416-15299471)
chr6 (90-152)||(8574697-8574759)
chr6 (90-152)||(8574760-8574822)
chr6 (90-163)||(1368479-1368552)
chr6 (115-163)||(9697489-9697537)
chr6 (112-163)||(6358249-6358300)
chr6 (92-162)||(15832470-15832540)
[»] scaffold0044 (2 HSPs)
scaffold0044 (118-210)||(56304-56396)
scaffold0044 (92-210)||(56311-56429)
[»] scaffold0009 (3 HSPs)
scaffold0009 (90-163)||(41999-42072)
scaffold0009 (168-210)||(42034-42076)
scaffold0009 (90-135)||(42090-42135)
[»] scaffold0169 (2 HSPs)
scaffold0169 (90-163)||(4077-4150)
scaffold0169 (163-210)||(4112-4159)
[»] scaffold0048 (2 HSPs)
scaffold0048 (90-163)||(82945-83018)
scaffold0048 (165-210)||(82980-83025)
[»] scaffold0129 (2 HSPs)
scaffold0129 (88-163)||(19198-19272)
scaffold0129 (90-162)||(19784-19855)
[»] scaffold0400 (1 HSPs)
scaffold0400 (90-163)||(4496-4569)
[»] scaffold0365 (1 HSPs)
scaffold0365 (90-163)||(5140-5213)
[»] scaffold0301 (1 HSPs)
scaffold0301 (90-163)||(7153-7226)
[»] scaffold0027 (2 HSPs)
scaffold0027 (90-163)||(10888-10961)
scaffold0027 (114-162)||(11276-11324)
[»] scaffold0240 (1 HSPs)
scaffold0240 (150-209)||(17561-17620)
[»] scaffold0318 (1 HSPs)
scaffold0318 (90-163)||(2869-2941)


Alignment Details
Target: chr7 (Bit Score: 101; Significance: 3e-50; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 44915197 - 44915317
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||||  |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  44915197 agtgtgtttggatgagagaattttttgagggaacgtaatgttttgaaggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagtag 44915296  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  44915297 ttgaattccctcaaaacatta 44915317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 2057397 - 2057517
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| ||||||| |||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||  |||||    
T  2057397 agtgtgtttggatgggggaatgttttgagcgaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtag 2057496  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  2057497 ttgaattccctcaaaacatta 2057517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 40110895 - 40110774
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc-aaacaataaaattcaccttagagta 188  Q
    ||||||||||||||  | ||| ||| |||||||||||||||||||| |||||| |||||||||||||||||||| |||||||| ||||||||||| ||||    
T  40110895 agtgtgtttggatggggaaatgtttcgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaagta 40110796  T
Q  189 gttgaattccctcaaaacatta 210  Q
    ||||||||||||||||||||||    
T  40110795 gttgaattccctcaaaacatta 40110774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 29065976 - 29065856
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||| |||||| |||| ||| ||||||||||||||| |||||| || || ||||||||| |||||||||||| ||||||||| | |||||    
T  29065976 agtgtgtttggatggaggaatgttttaaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtag 29065877  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  29065876 ttgaattccctcaaaacatta 29065856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 34388422 - 34388302
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||| |||| ||||| ||||||||||||||||| |||||| |||||| |||||||||||||||| ||||||||||  ||||||||||| |||||    
T  34388422 agtgtgtttgaatgatggaatgttttgagggaatgtaatattttgagggaattcaactactttgaggtgagttcaaacaatggaattcaccttaaagtag 34388323  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||| |||| |||||||    
T  34388322 ttgaattctctcagaacatta 34388302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 49052788 - 49052907
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||||   ||| |||||||| |||||||||||||||  ||||| |||||||||||| ||||||||||||||| ||||||||||| |||||    
T  49052788 agtgtgtttggatgagaaaatgttttgagg-aatgtaatgttttgagtgaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtag 49052886  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  49052887 ttgaattccctcaaaacatta 49052907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 40854127 - 40854007
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaagg-aatttaactactttgaggtgaattcaaacaataaaattcaccttagagta 188  Q
    ||||||||||||||  | ||| || |||||||||||||| |||||| || |||| |||||||||||| ||||||||||||||| ||||||||||| ||||    
T  40854127 agtgtgtttggatggggaaatgttctgagggaatgtaatattttgaggggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagta 40854028  T
Q  189 gttgaattccctcaaaacatt 209  Q
    |||||||||||||||||||||    
T  40854027 gttgaattccctcaaaacatt 40854007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 5644834 - 5644714
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||  |||||||| ||||||||||||||| |||||| || || |||||||||  ||||||||||| ||||||||| | |||||    
T  5644834 agtgtgtttggatgggggaacgttttgaggtaatgtaatgttttgagggaattcaattattttgaggtgggttcaaacaatagaattcacctcaaagtag 5644735  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  5644734 ttgaattccctcaaaacatta 5644714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 43955671 - 43955554
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| ||||||||| ||||| ||||    |||| |||||| |||| |||||    
T  43955671 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgcattc---taatagaattcatcttaaagtag 43955575  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  43955574 ttgaattccctcaaaacatta 43955554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 43955519 - 43955636
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| ||||||||| || |||||||    | || ||| ||||||| |||||    
T  43955519 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaagatgaattc---tattagaatgcaccttaaagtag 43955615  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  43955616 ttgaattccctcaaaacatta 43955636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 5644679 - 5644752
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||| ||| |||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  5644679 agtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 5644752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 29065821 - 29065894
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||| | |||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  29065821 agtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 29065894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 40110739 - 40110860
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc-aaacaataaaattcaccttagagta 188  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| ||||||||| |||||||||| |     |  ||||||||| | ||||    
T  40110739 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgttttgaattcacctcaaagta 40110838  T
Q  189 gttgaattccctcaaaacatta 210  Q
    ||||||||||||||||||||||    
T  40110839 gttgaattccctcaaaacatta 40110860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 21636038 - 21635969
Alignment:
Q  94 tgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||  | ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21636038 tgtttggatggggaaatgttttgagggaatgtaatgttttgaaggaatttaactactttgagatgaattc 21635969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 35777012 - 35776939
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||| ||||| |||||||||||||||||||| ||| |||||| || |||||||||||||||||    
T  35777012 agtgtgtttggatgagggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 35776939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 46069545 - 46069428
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| ||| |||| |||||||||||  || |||||| || || |||||| || |||||||||||| ||||||||| | |||||    
T  46069545 agtgtgtttggatgggggaatattt-gaggtaatgtaatgtt--gagggaattcaattattttgagatggattcaaacaatagaattcacctcaaagtag 46069449  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  46069448 ttgaattccctcaaaacatta 46069428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 21635887 - 21636007
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||| |||||||   |||| |||||||| ||||||||||||||| || ||| || || ||||||||| |||||||||||| |||||| || | |||||    
T  21635887 agtgtgcttggatgggagaatattttgaggtaatgtaatgttttgaggggattcaattattttgaggtggattcaaacaatagaattcatctcaaagtag 21635986  T
Q  190 ttgaattccctcaaaacatta 210  Q
    || |||||| |||||||||||    
T  21635987 ttaaattccttcaaaacatta 21636007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 6498822 - 6498751
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaat 161  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||| || |||||||| ||||||    
T  6498822 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtgaat 6498751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 26162194 - 26162121
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||||||||||||||||| ||| |||||| || |||||||||||||||||    
T  26162194 agtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 26162121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 31632724 - 31632797
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||||||||||||||||| ||| |||||| || |||||||||||||||||    
T  31632724 agtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 31632797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 2057552 - 2057432
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| ||||||||||| |||||||||||| |||||| ||||||||  |||||||||  |    |  || |||||| | |||||    
T  2057552 agtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactacttcaaggtgaattttattgtttgaactcacctcaaagtag 2057453  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  2057452 ttgaattccctcaaaacatta 2057432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 23455302 - 23455231
Alignment:
Q  92 tgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||| ||||| ||||||||||||||| |||||||| |||||| || ||||||| |||||||||    
T  23455302 tgtgtttggatgagggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 23455231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 9784988 - 9784918
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaa 160  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||| |||||| || ||||||| ||||||    
T  9784988 agtgtgtttggatggaggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaa 9784918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 28539234 - 28539152
Alignment:
Q  81 aactcataaagtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||| || ||||||||||||||  ||||| ||||||||||||||| |||||||| |||||| || ||||||| |||||||||    
T  28539234 aactcttagagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 28539152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 23548668 - 23548595
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||| | |||| || ||||||| |||||||||    
T  23548668 agtgtgtttggatggaggaatgttttgagggaatgtattgttttgaggaaattcaaatactttggggtgaattc 23548595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 34399006 - 34398938
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaag-gaatttaactactttgaggt 157  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| | ||||| ||||||||||||||    
T  34399006 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtgaattcaactactttgaggt 34398938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 46482102 - 46481983
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||| ||| || ||| | |||| |||||||||||||||||   |||| ||||| |||||| ||||||||||||||| |||||| |||  | |||    
T  46482102 agtgtgtttgaatggagaaatgtgttgaaggaatgtaatgttttgagaaaattcaacta-tttgagttgaattcaaacaatagaattcatcttcaaatag 46482004  T
Q  190 ttgaattccctcaaaacatta 210  Q
    || |||| |||||||||||||    
T  46482003 ttaaatttcctcaaaacatta 46481983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 29195711 - 29195766
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaa 145  Q
    |||||||||||||| |||||| |||||||| |||||||||||||||| ||||||||    
T  29195711 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgaaagaatttaa 29195766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 22391646 - 22391572
Alignment:
Q  88 aaagtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||||| ||||   ||| ||||||||||||||||||||||||  |||||||| || |||||||||||||    
T  22391646 aaagtgtgtttgaatgagataatgttttgagggaatgtaatgttttgagagaatttaaatattttgaggtgaatt 22391572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 18789303 - 18789230
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||| |||||| ||||||| |||| ||||||| ||| |||||| || |||||| ||||||||||    
T  18789303 agtgtgtttggatggaggaatattttgagagaatataatgttatgagggaattcaaatactttaaggtgaattc 18789230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 39342699 - 39342626
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||| | |||||| || ||||||| |||||||||    
T  39342699 agtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 39342626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 46069421 - 46069466
Alignment:
Q  118 gggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||    
T  46069421 gggaatgtaatgttttgagggaattcaactactttgaggtgaattc 46069466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 25189283 - 25189211
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||  ||||| |||||||| |||| |||||||||| |||||| || |||||||| |||||||    
T  25189283 agtgtgtttggatgtgggaatgttttgaggtaatgcaatgttttgagggaattcaaatactttgaagtgaatt 25189211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 49052913 - 49052822
Alignment:
Q  119 ggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||| |    |  |||||| || | ||||||||||||| ||||||||||||    
T  49052913 ggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattcactcaaaacatta 49052822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 30629061 - 30629131
Alignment:
Q  92 tgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||  ||||| ||||||||||||||| |||||| |  |||||||| ||||||| ||||||||    
T  30629061 tgtgtttggatgggggaatgttttgagggaatgtattgttttaagagaatttaaatactttggggtgaatt 30629131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 32650657 - 32650611
Alignment:
Q  163 caaacaataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||    
T  32650657 caaacaataaaattcacctcaaagtatttgaattccctcaaaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 43791116 - 43791162
Alignment:
Q  114 ttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaa 160  Q
    |||||||||||||||||||||| |||||| || ||||||||||||||    
T  43791116 ttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaa 43791162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 14603319 - 14603246
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||| | |||||| || ||||||| ||| |||||    
T  14603319 agtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtaaattc 14603246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 35455806 - 35455879
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||| | |||||| || ||||||| ||| |||||    
T  35455806 agtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtaaattc 35455879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 30524257 - 30524329
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||| |||||| || ||| |||||| ||||||||||||||||| |||||| || ||||||| | ||||||    
T  30524257 agtgtgtatggatggagtaatgttttgaaggaatgtaatgttttgagggaattcaaatactttgggatgaatt 30524329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 31913315 - 31913256
Alignment:
Q  150 tttgaggtgaattcaaacaataaaatt-caccttagagtagttgaattccctcaaaacatt 209  Q
    |||||||| ||||||||||||| |||| ||||||| | |||||||||||||||||||||||    
T  31913315 tttgaggtaaattcaaacaatagaatttcaccttaaa-tagttgaattccctcaaaacatt 31913256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 34388267 - 34388387
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  | ||| |||||||| || |||||||| |||  ||||| ||||||||| |||||||||| |    |  || |||||| | |||||    
T  34388267 agtgtgtttggatggggaaatattttgaggaaaagtaatgttctgagagaattcaactactttaaggtgaattccattgtttgaactcacctcaaagtag 34388366  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||| ||||    
T  34388367 ttgaattccctcaaaatatta 34388387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 15990895 - 15990958
Alignment:
Q  92 tgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgag 155  Q
    |||||||||||  || ||| |||||||| |||||||||| ||||||||||| || |||||||||    
T  15990895 tgtgtttggattgagtaatattttgaggtaatgtaatgtcttgaaggaattcaaatactttgag 15990958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 14790197 - 14790151
Alignment:
Q  163 caaacaataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    |||| |||||||||||||| | |||| ||||||||||||||||||||    
T  14790197 caaataataaaattcacctcaaagtatttgaattccctcaaaacatt 14790151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 29639272 - 29639199
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||| ||||||  ||||| |||| ||||||||||||||| ||| | |||| || || ||||||||||||||    
T  29639272 agtgtgtatggatgggggaatgttttcagggaatgtaatgttatgaggaaattcaaatattttgaggtgaattc 29639199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 3905699 - 3905643
Alignment:
Q  107 gaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||| |||||||| ||  ||||||||| |||||||| || |||||||||||||||||    
T  3905699 gaatgttttgaggaaaaataatgttttcaaggaattcaaatactttgaggtgaattc 3905643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 6498717 - 6498669
Alignment:
Q  114 ttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||| ||||||||||| |||||||||| || ||||||||||| ||||    
T  6498717 ttgaggaaatgtaatgttatgaaggaattcaaatactttgaggtaaatt 6498669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 3e-50; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 15373962 - 15374082
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||| | ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  15373962 agtgtgtttggatggaagaattttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagtag 15374061  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  15374062 ttgaattccctcaaaacatta 15374082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 32390129 - 32390009
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||| |  ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||| |||||||||||||||||    
T  32390129 agtgtgtttggattagagaattttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaataatagaattcaccttagagtag 32390030  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||| ||||    
T  32390029 ttgaattccctcaaaatatta 32390009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 9764495 - 9764375
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| ||| |||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||||||||||| |||||    
T  9764495 agtgtgtttggatgggggaatgtttcgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtag 9764396  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  9764395 ttgaattccctcaaaacatta 9764375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 20523135 - 20523255
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||   |||| ||||||||||||||||| || ||| |||||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  20523135 agtgtgtttggatgggagaatgttttgagggaatgtaatattctgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtag 20523234  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  20523235 ttgaattccctcaaaacatta 20523255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 40809343 - 40809463
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  | ||| ||||||| |||| ||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  40809343 agtgtgtttggatggggaaatgttttgagagaatataatgttttgagggaattcaactactttgagttgaattcaaacaataaaattcaccttaaagtag 40809442  T
Q  190 ttgaattccctcaaaacatta 210  Q
     ||||||| ||||||||||||    
T  40809443 ctgaattcactcaaaacatta 40809463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 2316535 - 2316415
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcacc-ttagagta 188  Q
    |||||||||||||| |  ||| ||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||| |||||||| ||| ||||    
T  2316535 agtgtgtttggatggaa-aatgttttgagggaatgtaatgttttgagagaattcaactactttgaggtgaattcaaacaatagaattcacctttaaagta 2316437  T
Q  189 gttgaattccctcaaaacatta 210  Q
    ||||||||||||||||| ||||    
T  2316436 gttgaattccctcaaaatatta 2316415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 32471015 - 32470919
Alignment:
Q  114 ttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||| |||||| |||||||||||| |||||||||| |||| |||| |||||| | |||||||||||| |||||||||||    
T  32471015 ttgagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaataatagaatttaccttaaaatagttgaattccttcaaaacatta 32470919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 32389971 - 32390094
Alignment:
Q  87 taaagtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagag 186  Q
    |||||||||||||||||| ||||| |||||| |||||||||| |||||| |||||| ||||||| | |||||||||| |  | |  ||||||||| | ||    
T  32389971 taaagtgtgtttggatgagggaatgttttgaaggaatgtaatattttgagggaattcaactactctaaggtgaattctattatttgaattcacctcaaag 32390070  T
Q  187 tagttgaattccctcaaaacatta 210  Q
    ||||||||||||||||||||||||    
T  32390071 tagttgaattccctcaaaacatta 32390094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 15374117 - 15373997
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| ||||||| | |||||||||| |    |  ||||||||| | |||||    
T  15374117 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaagtag 15374018  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  15374017 ttgaattccctcaaaacatta 15373997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 23092119 - 23091999
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| ||||||  |||||||||||||||| ||| || ||||||||| || |||||||| | |||| |||||| |||| |||||    
T  23092119 agtgtgtttggatgggggaatgttttgaacgaatgtaatgttttgagggagttcaactactttcagatgaattcagaaaatagaattcaacttaaagtag 23092020  T
Q  190 ttgaattccctcaaaacatta 210  Q
    ||||||||| |||||||||||    
T  23092019 ttgaattccttcaaaacatta 23091999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 9764340 - 9764460
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| ||||||||||| |||||||||||| |||||| ||||||||| |||||||||| |    |  || |||||| | |||||    
T  9764340 agtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtag 9764439  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  9764440 ttgaattccctcaaaacatta 9764460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 32470884 - 32471004
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||| |||||||| || ||| ||||||||||||||||||||||||||||||| ||||| ||| |||| ||||| |  | |  |||||| || | |||||    
T  32470884 agtgtatttggatggagaaatgttttgagggaatgtaatgttttgaaggaattcaactattttaaggtaaattctattatttgaattcaactcaaagtag 32470983  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  32470984 ttgaattccctcaaaacatta 32471004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 40643856 - 40643939
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||||||| |||||| |||||||||||| | ||||||||||||| ||||||||||| | ||||||||||||||||||||||||    
T  40643856 aatgttttgagggaattcaactactttgagttaaattcaaacaatagaattcacctta-aatagttgaattccctcaaaacatta 40643939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 2721628 - 2721557
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaat 161  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  2721628 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaat 2721557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 92 - 183
Target Start/End: Original strand, 16515009 - 16515099
Alignment:
Q  92 tgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcacctta 183  Q
    |||||||||||| || ||| |||||||||||||||| ||||||| |||||| |||| ||||||||||||||| ||||||| |||||||||||    
T  16515009 tgtgtttggatggag-aatgttttgagggaatgtaaggttttgagggaattcaacttctttgaggtgaattctaacaatagaattcacctta 16515099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 37722962 - 37722889
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| || |||||||||||||||||    
T  37722962 agtgtgtttggatgggggaatattttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaattc 37722889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 166
Target Start/End: Original strand, 15804324 - 15804400
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaa 166  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||||| |||||| |||||||||||| ||||||||||    
T  15804324 agtgtgtttggatgggggaatgttttgagggaatgtagtgttttgagggaattcaactactttgagttgaattcaaa 15804400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 19533975 - 19533903
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||||||| |||||| |||||||||||||||||||| ||| |||||| || ||||||||||||||||    
T  19533975 agtgtgtttggatggaggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaatt 19533903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 202
Target Start/End: Complemental strand, 20523290 - 20523178
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| ||||||| |||||||||||||||| |||||| ||||||||| |||||||||| |    |  ||||||||| | |||||    
T  20523290 agtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtag 20523191  T
Q  190 ttgaattccctca 202  Q
    |||||||||||||    
T  20523190 ttgaattccctca 20523178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 22303938 - 22303866
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||    
T  22303938 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatt 22303866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 2316380 - 2316501
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactacttt-gaggtgaattcaaacaataaaattcaccttagagta 188  Q
    ||||||||||||||  ||||| ||||||||||||||||| |||||| |||||| |||||||||  |||||||||| |    |  ||||||||| | ||||    
T  2316380 agtgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaactactttaaaggtgaattctattgtttgaattcacctcaaagta 2316479  T
Q  189 gttgaattccctcaaaacatta 210  Q
    ||||||||| ||||||||||||    
T  2316480 gttgaattctctcaaaacatta 2316501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 3563279 - 3563352
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||   ||||| |||||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  3563279 agtgtgtttggataggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattc 3563352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 16515175 - 16515102
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||||  |||| |||| ||||||||||||||||||| |||||| |||| |||||||||||||||    
T  16515175 agtgtgtttggatgagagaatgtttttagggaatgtaatgttttgagggaattcaacttctttgaggtgaattc 16515102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 26281337 - 26281264
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||  |||||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  26281337 agtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattc 26281264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 40090482 - 40090409
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||||| ||||||||||||||| |||||| || |||||||||||||||||    
T  40090482 agtgtgtttggatgggggaatgttttgaggaaatgtaatgttttgatggaattcaaatactttgaggtgaattc 40090409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 90 - 194
Target Start/End: Original strand, 6634017 - 6634120
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  || || |||||||| ||||||||||||||| |||||| || || || || |||||||||||||||| ||||||||| | |||||    
T  6634017 agtgtgtttggatggggggatattttgaggtaatgtaatgttttgagggaattcaattatttcga-gtgaattcaaacaatagaattcacctcaaagtag 6634115  T
Q  190 ttgaa 194  Q
    |||||    
T  6634116 ttgaa 6634120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 28828504 - 28828417
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattc 177  Q
    ||||||||||||||  | ||| |||||||| ||||||||||||||| |||||| || || ||||||||| |||||||||||| |||||    
T  28828504 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattc 28828417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 40643974 - 40643856
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| ||||| ||| |||||||||| |    |  |||| | || | |||||    
T  40643974 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaacta-tttaaggtgaattctattgtttgaatttaactcaaagtag 40643876  T
Q  190 ttgaattccctcaaaacatt 209  Q
    ||||||||||||||||||||    
T  40643875 ttgaattccctcaaaacatt 40643856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 22766954 - 22767027
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||||||||| ||||||||||| |||||| || |||||| ||||||||||    
T  22766954 agtgtgtttggatgggggaatgttttgagggaatataatgttttgagggaattcaaatactttaaggtgaattc 22767027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 23091980 - 23092037
Alignment:
Q  106 ggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||| || |||||||    
T  23091980 ggaatattttgagggaatgtaatgttttgaaggaattcaactactttaagttgaattc 23092037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 25935358 - 25935285
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||||||||||||||||| ||| | |||| || |||||||||||||||||    
T  25935358 agtgtgtttggatgggggaatgttttgagggaatgtaatgttatgaggaaattcaaatactttgaggtgaattc 25935285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 3563365 - 3563314
Alignment:
Q  159 aattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||||||||||||    
T  3563365 aattcaagcaatagaattcaccttaaagtagttgaattccctcaaaacatta 3563314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 37145571 - 37145497
Alignment:
Q  88 aaagtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||| |||||||||  ||||| |||||||||||||||||||| |||  ||||| || ||||||||||||||||    
T  37145571 aaagtgggtttggatgggggaatgttttgagggaatgtaatgttatgagagaattcaaatactttgaggtgaatt 37145497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 927304 - 927377
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  | ||| ||||||||||||||| |||||||| |||||| || ||||||| |||||||||    
T  927304 agtgtgtttggatggggaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 927377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 28828368 - 28828421
Alignment:
Q  89 aagtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatt 142  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||| ||||||    
T  28828368 aagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 28828421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 41762283 - 41762210
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||| | |||||| || ||||||| |||||||||    
T  41762283 agtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 41762210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 6634170 - 6634098
Alignment:
Q  91 gtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||  ||||  ||| ||||||||||||| |||| ||||| || ||||||||||||||||||||    
T  6634170 gtgtgtttggatgggggaacatttcgagggaatgtaatattttaaaggagttcaactactttgaggtgaattc 6634098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 9894388 - 9894317
Alignment:
Q  92 tgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||  ||||| ||||||||||||||||||||   | |||||| || |||||||||||||||||    
T  9894388 tgtgtttggatgggggaatgttttgagggaatgtaatgttaccagggaattcaaatactttgaggtgaattc 9894317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 22767036 - 22766989
Alignment:
Q  163 caaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  22767036 caaacaatagaattcaccttaaagtatttgaattccctcaaaacatta 22766989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 15804451 - 15804398
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaattt 143  Q
    ||||||||||||||  | ||| |||||||||||||||||||||||| |||||||    
T  15804451 agtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattt 15804398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 20320716 - 20320643
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||||| |||| |||||| |||||||||| |||| | |||||| || |||||||  ||||||||    
T  20320716 agtgtgtttggatgaatgaatgttttgaaggaatgtaatattttaagggaattcaaatactttggtgtgaattc 20320643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 26281265 - 26281302
Alignment:
Q  173 aattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  26281265 aattcaccttaaagtagttgaattccctcaaaacatta 26281302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 32250165 - 32250093
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| ||||||||||| |||||||||||| |||||| || ||| ||||| |||||||    
T  32250165 agtgtgtttggatgg-ggaatgttttgagggaaagtaatgttttgagggaattcaaataccttgagatgaattc 32250093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 33245440 - 33245367
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||| |||||||||||||||||   |||| ||||||||| || |||||||    
T  33245440 agtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaattcaactactttaagttgaattc 33245367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 13243469 - 13243513
Alignment:
Q  98 tggatgaaggaattttttgagggaatgtaatgttttgaaggaatt 142  Q
    ||||||| ||||| |||||||||||||||||||||||| ||||||    
T  13243469 tggatgagggaatgttttgagggaatgtaatgttttgagggaatt 13243513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 40809498 - 40809378
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||| ||||  | ||| ||||||| ||||||||||||||||  ||||| | ||||||| |||||||||  |    |  |||||| || | |||||    
T  40809498 agtgtgtttagatggggaaatgttttgagagaatgtaatgttttgagtgaattcagctactttaaggtgaattttattgtttgaattcaactcaaagtag 40809399  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  40809398 ttgaattccctcaaaacatta 40809378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 133
Target Start/End: Original strand, 5658778 - 5658821
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgtttt 133  Q
    |||||||||||||| || ||| ||||||||||||||||||||||    
T  5658778 agtgtgtttggatggagaaatgttttgagggaatgtaatgtttt 5658821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 34982218 - 34982288
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaat 161  Q
    |||||||||||||   ||||| |||||||||||||| ||||||||| |||||| ||| ||||| ||||||||    
T  34982218 agtgtgtttggataggggaatgttttgagggaatgt-atgttttgagggaattcaaccactttaaggtgaat 34982288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 22305178 - 22305132
Alignment:
Q  163 caaacaataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    ||||||||  ||||||||| | |||||||||||||||||||||||||    
T  22305178 caaacaatggaattcacctcaaagtagttgaattccctcaaaacatt 22305132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 2550385 - 2550348
Alignment:
Q  172 aaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    |||||||||| | |||||||||||||||||||||||||    
T  2550385 aaattcacctcaaagtagttgaattccctcaaaacatt 2550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 13243561 - 13243516
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttga 135  Q
    ||||||||||||||  ||||| |||||||| |||||||||||||||    
T  13243561 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttga 13243516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 14834825 - 14834898
Alignment:
Q  89 aagtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||| |||   |||| ||| |||||||||||||||||| | |||||  || ||||||||||||||||    
T  14834825 aagtgtgtttgcatgggagaatgtttcgagggaatgtaatgttttaagggaatccaaatactttgaggtgaatt 14834898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 15270837 - 15270886
Alignment:
Q  160 attcaaacaataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    |||||||||||  ||||||||| | |||| ||||||||||||||||||||    
T  15270837 attcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 15270886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 17542344 - 17542393
Alignment:
Q  160 attcaaacaataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    |||||||||||  ||||||||| | |||| ||||||||||||||||||||    
T  17542344 attcaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 17542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 22305132 - 22305169
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  22305132 aatgttttgagggaattcaactactttgaggtgaattc 22305169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 2550348 - 2550384
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||| |||||| |||||||||||||||||||    
T  2550348 aatgttttgagggaattcaactactttgaggtgaatt 2550384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 2721557 - 2721593
Alignment:
Q  174 attcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||||| | ||||||||||||||||||||||||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacatta 2721593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 11601042 - 11601113
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||| |||| | ||| |||| ||| ||| |||||||||||||||||| || || |||||||||||||    
T  11601042 agtgtgtttgaatgatg-aatattttaaggtaatataatgttttgaaggaattcaaataatttgaggtgaatt 11601113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 12064500 - 12064464
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  12064500 aatgttttgagggaatttaaatactttgaggtgaatt 12064464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 35379346 - 35379417
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||  ||||| |||||||  ||||||||||||||| |||||| || | |||||| |||||||    
T  35379346 agtgtgtttggatgg-ggaatgttttgagataatgtaatgttttgagggaattcaaattctttgaagtgaatt 35379417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 2e-45; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 44692979 - 44692859
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| ||| |    
T  44692979 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtgg 44692880  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  44692879 ttgaattccctcaaaacatta 44692859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 9129501 - 9129381
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||| |||| |||||    
T  9129501 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtag 9129402  T
Q  190 ttgaattccctcaaaacatta 210  Q
    ||||||||| |||||||||||    
T  9129401 ttgaattccatcaaaacatta 9129381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 9137608 - 9137488
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||| |||| |||||    
T  9137608 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtag 9137509  T
Q  190 ttgaattccctcaaaacatta 210  Q
    ||||||||| |||||||||||    
T  9137508 ttgaattccatcaaaacatta 9137488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 46429553 - 46429434
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||||||||| || || ||||||||| |||||||||||| ||||||||||| |||||    
T  46429553 agtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaaggaattcaattattttgaggtggattcaaacaatagaattcaccttaaagtag 46429454  T
Q  190 ttgaattccctcaaaacatt 209  Q
    ||||||||||||||||||||    
T  46429453 ttgaattccctcaaaacatt 46429434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 27252051 - 27251932
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  || || |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||| |||| |||||    
T  27252051 agtgtgtttggatggggggatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaagtag 27251952  T
Q  190 ttgaattccctcaaaacatt 209  Q
    ||||||||||| ||||||||    
T  27251951 ttgaattcccttaaaacatt 27251932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 5415785 - 5415905
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||   ||||| |||||||||||||||||||||||| |||||| ||||||||| |||||| | ||||||||| ||||||||||| |||||    
T  5415785 agtgtgtttggataggggaatattttgagggaatgtaatgttttgagggaattcaactactttaaggtgagtacaaacaatagaattcaccttaaagtag 5415884  T
Q  190 ttgaattccctcaaaacatta 210  Q
    ||||||||| |||||||||||    
T  5415885 ttgaattccatcaaaacatta 5415905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 121 - 210
Target Start/End: Complemental strand, 44436384 - 44436295
Alignment:
Q  121 aatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| | |||||||||| |||||||||||||    
T  44436384 aatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaaatagttgaatttcctcaaaacatta 44436295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 94 - 209
Target Start/End: Original strand, 28092220 - 28092335
Alignment:
Q  94 tgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttga 193  Q
    ||||||||||  ||||| |||||||| ||||| ||||||||| |||||| || ||||||||||||||||||||||||| ||||||||| | |  ||||||    
T  28092220 tgtttggatgggggaatgttttgaggaaatgtgatgttttgagggaattcaattactttgaggtgaattcaaacaatagaattcacctcaaaacagttga 28092319  T
Q  194 attccctcaaaacatt 209  Q
    ||||||||||||||||    
T  28092320 attccctcaaaacatt 28092335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 107 - 210
Target Start/End: Complemental strand, 31070546 - 31070443
Alignment:
Q  107 gaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaac 206  Q
    |||| |||||||| ||||||||||||||| |||||| || || ||||||||| |||||||||||| ||||||||| | ||||||||||||||||||||||    
T  31070546 gaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaac 31070447  T
Q  207 atta 210  Q
    ||||    
T  31070446 atta 31070443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 332012 - 332096
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattcaaa-caataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||    
T  332012 aatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 332096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 47284383 - 47284268
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||||  |||| |||||||| ||||||||||||||| |||||| || || ||||||||  |||||||||||| ||||||||| | |||||    
T  47284383 agtgtgtttggatgagagaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggttgattcaaacaatagaattcacctcaaagtag 47284284  T
Q  190 ttgaattccctcaaaa 205  Q
     |||||||||||||||    
T  47284283 ctgaattccctcaaaa 47284268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 39110396 - 39110485
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcac 179  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||  |||||| |||||||||||| ||||||||||||||| |||||||    
T  39110396 agtgtgtttggatgaagaaatgttttgagcgaatgtaatgttttgtgggaattcaactactttgagttgaattcaaacaatagaattcac 39110485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 46672873 - 46672800
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  46672873 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 46672800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 5415940 - 5415820
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| ||||||||||| |||||||||||| |||||| ||||||||| |||||||||| |    |   | |||||||| |||||    
T  5415940 agtgtgtttggatgggggaatattttgagggaaagtaatgttttgatggaattcaactactttaaggtgaattctattgtttgtactcaccttaaagtag 5415841  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  5415840 ttgaattccctcaaaacatta 5415820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 42006023 - 42005951
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  42006023 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaatttaaataccttgaggtgaatt 42005951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 44436260 - 44436380
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| | |||| ||||| ||| |||||||||| |    |  ||||||||| | |||||    
T  44436260 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactattttaaggtgaattctattgtttgaattcacctcaaagtag 44436359  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  44436360 ttgaattccctcaaaacatta 44436380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 44692824 - 44692944
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| ||||||||||| |||||||||||| |||||| ||| ||||| |||||||||| |    |  ||||||||| | |||||    
T  44692824 agtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagtag 44692923  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  44692924 ttgaattccctcaaaacatta 44692944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 25655335 - 25655418
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    |||||||||| |||||| |||||||||||| |||||||||| |||| |||||| |||| |||||||||||||| ||||||||||    
T  25655335 aatgttttgagggaattcaactactttgagttgaattcaaataatagaattcaacttaaagtagttgaattccgtcaaaacatt 25655418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 39215995 - 39215880
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||||  |||| |||||||| ||| |||||||||||   |||| || || ||||||||| |||||||||||||||||||||| | ||||     
T  39215995 agtgtgtttggatgagagaatattttgaggtaatataatgttttgagaaaattcaattattttgaggtggattcaaacaataaaattcacctcaaagtaa 39215896  T
Q  190 ttgaattccctcaaaa 205  Q
    ||||||||||| ||||    
T  39215895 ttgaattccctaaaaa 39215880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 9129346 - 9129466
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||   || | |||||||||||||||||||||||| |||||| ||||||||| || ||||||| |    |  ||||||||| | |||||    
T  9129346 agtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtag 9129445  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  9129446 ttgaattccctcaaaacatta 9129466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 9137453 - 9137573
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||   || | |||||||||||||||||||||||| |||||| ||||||||| || ||||||| |    |  ||||||||| | |||||    
T  9137453 agtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtag 9137552  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  9137553 ttgaattccctcaaaacatta 9137573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 47767434 - 47767506
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||    
T  47767434 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatt 47767506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 7302348 - 7302421
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| |  ||| |||||||||||||    
T  7302348 agtgtgtttggatgagggaatgttttgagagaatgtaatgttttgaaggaattcagataccttgaggtgaattc 7302421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 31070424 - 31070481
Alignment:
Q  106 ggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  31070424 ggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 31070481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 49457345 - 49457418
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| ||| ||||| ||||||||||    
T  49457345 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaaccactttaaggtgaattc 49457418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 37054396 - 37054468
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||  ||||| |||| |||||||||||||||||||||||||| || ||| ||||||||||||    
T  37054396 agtgtgtttggatgggggaatgttttaagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatt 37054468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 21307600 - 21307529
Alignment:
Q  92 tgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||  ||||| ||||| |||||||||||||||||| |||||| || |||||||||||||||||    
T  21307600 tgtgtttggatgggggaatgttttgcgggaatgtaatgttttgagggaattcaaatactttgaggtgaattc 21307529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 30766571 - 30766628
Alignment:
Q  106 ggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||| ||||||||||||||||||||||||||||||| || ||| |||||||||||||    
T  30766571 ggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattc 30766628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 34088573 - 34088646
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||| || ||| ||||||||||||||| |||||||| |||||| || ||||||| |||||||||    
T  34088573 agtgtgtttggatggagaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 34088646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 36398059 - 36397986
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||||| |||||| || ||||||| |||||||||    
T  36398059 agtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 36397986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 53129913 - 53129840
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||| | |||||| || ||||||| |||||||||    
T  53129913 agtgtgtttggatgagggaatgtttcgagggaatgtaatgttttaagggaattcaaatactttggggtgaattc 53129840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 7976567 - 7976623
Alignment:
Q  107 gaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||| |||||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  7976567 gaatgttttgaaggaatgtaatgttttgaaggaatttaaatacattgaggtgaattc 7976623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 19475824 - 19475891
Alignment:
Q  96 tttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||| |||||| |||||||||||||||||||| ||| | |||| || |||||||||||||||||    
T  19475824 tttggatggaggaatgttttgagggaatgtaatgttatgaggtaattcaaatactttgaggtgaattc 19475891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 48947607 - 48947680
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||| | |||| ||||||||||||||| ||||||||  ||||| || ||||||| |||||||||    
T  48947607 agtgtgtttggatggaagaatgttttgagggaatgtattgttttgagagaattcaaatactttggggtgaattc 48947680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 53470499 - 53470427
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||| | ||| |||||||||||| || |||||||| |||||| || ||||||| ||||||||    
T  53470499 agtgtgtttggatgaggaaatgttttgagggaatctattgttttgagggaattcaaatactttggggtgaatt 53470427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 46672771 - 46672838
Alignment:
Q  137 ggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||| ||||||||||||||||||||||       ||||||||| | ||||||||||||||||||||||||||    
T  46672771 ggaattcaactactttgaggtgaattcaag------aattcacctcaaagtagttgaattccctcaaaacatta 46672838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 37321552 - 37321625
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||| ||||||||  ||||| |||||||| || |||||||||||| | |||| ||||||||| ||||||||||    
T  37321552 agtgtatttggatgggggaatattttgaggaaaagtaatgttttgaggaaattcaactactttaaggtgaattc 37321625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 31189467 - 31189395
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||| ||||  |||| |||||||| |||||||||||||||  ||||| || ||||||||||| ||||    
T  31189467 agtgtgtttgaatgagagaatgttttgaggtaatgtaatgttttgagagaattcaaatactttgaggtaaatt 31189395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 42130694 - 42130814
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||| ||  ||||| ||||||||  |||||||||||||| |||||| || ||  || | ||| ||||||| | || ||||||||| | ||||     
T  42130694 agtgtgtttgggtgggggaatattttgaggtgatgtaatgttttgagggaattcaattatctttaagtggattcaaagagtagaattcacctcaaagtaa 42130793  T
Q  190 ttgaattccctcaaaacatta 210  Q
    ||||||||||| |||| ||||    
T  42130794 ttgaattccctaaaaagatta 42130814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 52527039 - 52527111
Alignment:
Q  91 gtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||  ||||| |||||| || |||||||||| || ||||||| || ||||||||||| |||||    
T  52527039 gtgtgtttggatgggggaatgttttgaagggatgtaatgttatggaggaattcaaatactttgaggtaaattc 52527111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 25655418 - 25655335
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    |||||||||| |||||| ||||||||| || ||||||| |  | |  |||||| || | |||||||||||||||||||||||||    
T  25655418 aatgttttgacggaattcaactactttaagttgaattctattatttgaattcaactcaaagtagttgaattccctcaaaacatt 25655335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 35279970 - 35279927
Alignment:
Q  92 tgtgtttggatgaaggaattttttgagggaatgtaatgttttga 135  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||    
T  35279970 tgtgtttggatgggggaatgttttgagggaatgtaatgttttga 35279927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 49457423 - 49457380
Alignment:
Q  167 caataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||| ||||||||||| ||| ||||||||||||||||||||||    
T  49457423 caatagaattcaccttaaagtggttgaattccctcaaaacatta 49457380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 44288525 - 44288467
Alignment:
Q  94 tgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactacttt 152  Q
    |||||||||| |||||| |||||||| ||| ||||||||||| |||||| || ||||||    
T  44288525 tgtttggatggaggaatgttttgaggtaatataatgttttgatggaattcaaatacttt 44288467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 671673 - 671616
Alignment:
Q  106 ggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||| ||||||||||||||| |||||||| |||||| |  ||||||| |||||||||    
T  671673 ggaatgttttgagggaatgtattgttttgagggaattcagatactttggggtgaattc 671616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 27251979 - 27252016
Alignment:
Q  173 aattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  27251979 aattcacctcaaagtagttgaattccctcaaaacatta 27252016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 37321624 - 37321587
Alignment:
Q  173 aattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  37321624 aattcaccttaaagtagttgaatttcctcaaaacatta 37321587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 332048 - 332012
Alignment:
Q  173 aattcaccttagagtagttgaattccctcaaaacatt 209  Q
    ||||||||| | |||||||||||||||||||||||||    
T  332048 aattcacctcaaagtagttgaattccctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 46001366 - 46001418
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatt 142  Q
    ||||||||||||||  ||||| |||||||| |||||||||||| || ||||||    
T  46001366 agtgtgtttggatggcggaatattttgaggtaatgtaatgtttcgagggaatt 46001418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 784795 - 784915
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||| |  ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||    
T  784795 agtgtgtttggatggaaaaatgttttgagggaatgtaatgttttgaaggaatttaactactttgagttgaattcaaacaatagaattcaccttaaagtag 784894  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  784895 ttgaattccctcaaaacatta 784915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 14537201 - 14537320
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  14537201 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtag 14537300  T
Q  190 ttgaattccctcaaaacatt 209  Q
    ||||||||||||||||||||    
T  14537301 ttgaattccctcaaaacatt 14537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 14365702 - 14365821
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc-aaacaataaaattcaccttagagta 188  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||| ||||||||  | ||||    
T  14365702 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcacc--aaagta 14365799  T
Q  189 gttgaattccctcaaaacatta 210  Q
    ||||||||||||||||||||||    
T  14365800 gttgaattccctcaaaacatta 14365821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 11716410 - 11716502
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcacctt 182  Q
    |||||||||||||| | |||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||    
T  11716410 agtgtgtttggatggaagaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacctt 11716502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 41461517 - 41461637
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  | ||| |||||||| ||||||||||||||| ||||||||| || ||||||||| |||||||||||| ||||||||| | | |||    
T  41461517 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaatttaattattttgaggtggattcaaacaatagaattcacctcaaaatag 41461616  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  41461617 ttgaattccctcaaaacatta 41461637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 11824718 - 11824801
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11824718 aatgttttgagggaattcaactactttgagatgaattcaaacaatataattcaccttaaagtagttgaattccctcaaaacatt 11824801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 10244298 - 10244214
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||||| | |||||| |||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  10244298 aatgttttaagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacatta 10244214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 14954268 - 14954389
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaa-caataaaattcaccttagagta 188  Q
    |||||||||||||  |||||| ||||||| ||||||||| |||| |  ||||| ||||||||| | || |||||||| ||||| ||||||||||| ||||    
T  14954268 agtgtgtttggatagaggaatgttttgagtgaatgtaatcttttaagagaattcaactactttaaagtaaattcaaaacaatagaattcaccttaaagta 14954367  T
Q  189 gttgaattccctcaaaacatta 210  Q
    ||||||||||||||||||||||    
T  14954368 gttgaattccctcaaaacatta 14954389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 3345867 - 3345783
Alignment:
Q  126 aatgttttgaaggaatttaac-tactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    |||||||||| |||||| ||| ||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||    
T  3345867 aatgttttgagggaattcaacgtactttgaggtgaattcaaacaatagaatttaccttaaagtagttgaattccctcaaaacatt 3345783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 14365856 - 14365737
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc-aaacaataaaattcaccttagagta 188  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||| |||||||||  ||||||||| |     |  ||||||||| | ||||    
T  14365856 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactacttt--ggtgaattctattgttttgaattcacctcaaagta 14365759  T
Q  189 gttgaattccctcaaaacatta 210  Q
    ||||||||||||||||||||||    
T  14365758 gttgaattccctcaaaacatta 14365737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 41461681 - 41461599
Alignment:
Q  81 aactcataaagtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||| || ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| ||||| ||||||||||||||    
T  41461681 aactcttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaattc 41461599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 17180299 - 17180372
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| |||||| ||||| |||||| |||||||    
T  17180299 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactattttgagatgaattc 17180372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 27033492 - 27033565
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| ||||||| |||||||||||||||| |||||| ||||||||||||||||||||    
T  27033492 agtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgaggtgaattc 27033565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 11532326 - 11532251
Alignment:
Q  88 aaagtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||||  ||||| ||| |||||||||||||||||||| |||||| || |||||||||||||||||    
T  11532326 aaagtgtgtttggatgggggaatatttggagggaatgtaatgttttgagggaattcaaatactttgaggtgaattc 11532251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 784950 - 784877
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||| ||||||||||||||||| |||||| ||||||||| ||||||||||    
T  784950 agtgtgtttggatgggggaatattttgatggaatgtaatgttttgagggaattcaactactttaaggtgaattc 784877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 11793897 - 11793970
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||||||||||||||||| ||| |||||| || |||||||||||||||||    
T  11793897 agtgtgtttggatgggggaatattttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 11793970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 45094542 - 45094469
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||| |||| ||||| |||||||||||| ||||||||||| |||||||||||||||| | ||||||||    
T  45094542 agtgtgtttgaatgagggaatgttttgagggaatataatgttttgagggaatttaactactttaaagtgaattc 45094469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 11684711 - 11684655
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcacctt 182  Q
    |||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||    
T  11684711 aatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacctt 11684655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 210
Target Start/End: Complemental strand, 27033587 - 27033527
Alignment:
Q  150 tttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||||| |||||||||||| ||||||||| | ||||||||||||||||||||||||||    
T  27033587 tttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacatta 27033527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 30698289 - 30698355
Alignment:
Q  96 tttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||    
T  30698289 tttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatt 30698355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 10480121 - 10480194
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| ||||||||||||||||||||  || |||||| || |||||||||||||||||    
T  10480121 agtgtgtttggatgggggaatgttttgagggaatgtaatgttacgagggaattcaaatactttgaggtgaattc 10480194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 17905656 - 17905729
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||| |||||| ||||| ||||||| |||||||||||||| |||||||| || || ||||||||||||||    
T  17905656 agtgtgttaggatgagggaatgttttgagagaatgtaatgttttaaaggaattcaaatattttgaggtgaattc 17905729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 7167714 - 7167666
Alignment:
Q  114 ttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||    
T  7167714 ttgagggaatgtaatgttttgaaggaattcaaatactttgaggtgaatt 7167666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 7228083 - 7228011
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||  | ||| ||||||| |||||||||||||||||||||||||| ||| ||||||| ||||    
T  7228083 agtgtgtttggatggggaaatgttttgagagaatgtaatgttttgaaggaatttaaataccttgaggtaaatt 7228011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 769038 - 769111
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||| | |||||| || ||||||| |||||||||    
T  769038 agtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 769111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 1583880 - 1583807
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||| | |||||| || ||||||| |||||||||    
T  1583880 agtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 1583807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 13017781 - 13017854
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  | ||| ||||||||||||||||| |||| | |||||| || |||||||||||||||||    
T  13017781 agtgtgtttggatgtggaaatgttttgagggaatgtaatattttaagggaattcaaatactttgaggtgaattc 13017854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 33189328 - 33189255
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||| | |||||| || ||||||| |||||||||    
T  33189328 agtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 33189255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 44256263 - 44256183
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaata 171  Q
    ||||||||||||||  ||||| ||| |||| ||||||||||||||| ||||||  | || ||||||||||||||||||||||    
T  44256263 agtgtgtttggatgggggaatattt-gaggtaatgtaatgttttgagggaattcgattattttgaggtgaattcaaacaata 44256183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 11141307 - 11141379
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||| | |||||| || ||||||| ||||||||    
T  11141307 agtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaatt 11141379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 92 - 142
Target Start/End: Original strand, 11684603 - 11684653
Alignment:
Q  92 tgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatt 142  Q
    ||||||||||||  ||||| |||||||||||||||||||||||| ||||||    
T  11684603 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 11684653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 3092284 - 3092357
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||| |||||||| |||||| ||||||||||||||| |||||||| | |||| || ||||||| ||| |||||    
T  3092284 agtgtatttggatggaggaatgttttgagggaatgtattgttttgaggaaattcaaatactttggggtaaattc 3092357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 35047750 - 35047677
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||||| |||||| |||||| | |||||| || ||||||| |||||||||    
T  35047750 agtgtgtttggatgggggaatgttttgaggaaatgtattgttttaagggaattcaaatactttggggtgaattc 35047677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 40026082 - 40026139
Alignment:
Q  106 ggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||| |||||||| ||| ||||||||||| | ||||||| |||||||||||||||||    
T  40026082 ggaatattttgaggtaatataatgttttgaggaaatttaaatactttgaggtgaattc 40026139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 10244179 - 10244251
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||   |||| || |||||||| |||||||||||| |||||| ||||||||  |||||||||    
T  10244179 agtgtgtttggatgggagaatattctgagggaaagtaatgttttgagggaattcaactacttcaaggtgaatt 10244251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 11606719 - 11606787
Alignment:
Q  94 tgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||| |||||| ||||| |||||| |||||||||| |||| |||||||  || ||||||||||||||||    
T  11606719 tgttaggatgagggaatgttttgaaggaatgtaatattttcaaggaatacaaatactttgaggtgaatt 11606787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 28740599 - 28740671
Alignment:
Q  91 gtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||| |||  | ||| |||||||||||||||||||||||| |||||| || |||||||| || |||||    
T  28740599 gtgtgtttgaatggggaaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtaaattc 28740671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 29279092 - 29279048
Alignment:
Q  88 aaagtgtgtttggatgaaggaattttttgagggaatgtaatgttt 132  Q
    ||||| ||||||||||||||||| |||||||| ||||||||||||    
T  29279092 aaagtttgtttggatgaaggaatgttttgaggtaatgtaatgttt 29279048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 32839694 - 32839646
Alignment:
Q  115 tgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||||||||| |||||| || |||||||| ||||||||    
T  32839694 tgagggaatgtaatgttttgagggaattcaaatactttgacgtgaattc 32839646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 142
Target Start/End: Complemental strand, 11716550 - 11716504
Alignment:
Q  96 tttggatgaaggaattttttgagggaatgtaatgttttgaaggaatt 142  Q
    ||||||||  ||||| |||||||||||||||||||||||| ||||||    
T  11716550 tttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 11716504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 163
Target Start/End: Complemental strand, 14954393 - 14954351
Alignment:
Q  121 aatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||| |||||| ||||||||| ||||||||||    
T  14954393 aatgtaatgttttgagggaattcaactactttaaggtgaattc 14954351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 11594837 - 11594882
Alignment:
Q  117 agggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||||| ||||||||||||  || ||||||||||||||||    
T  11594837 agggaatgtaatattttgaaggaatacaaatactttgaggtgaatt 11594882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 11716482 - 11716445
Alignment:
Q  173 aattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  11716482 aattcacctcaaagtagttgaattccctcaaaacatta 11716445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 39630227 - 39630299
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||| ||| || ||| ||||||||||||||| |||||||| |||||| || || ||||||| ||||||    
T  39630227 agtgtgtttgaatggagaaatgttttgagggaatgtattgttttgagggaattcaaata-tttgaggggaattc 39630299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 11684675 - 11684711
Alignment:
Q  173 aattcaccttagagtagttgaattccctcaaaacatt 209  Q
    ||||||||| | |||||||||||||||||||||||||    
T  11684675 aattcacctcaaagtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 32840227 - 32840191
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  32840227 aatgttttgagggaatttaaatactttgaggtgaatt 32840191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 15034816 - 15034696
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  15034816 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagtag 15034717  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  15034716 ttgaattccctcaaaacatta 15034696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 23536069 - 23536188
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| |||||    
T  23536069 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatataattcaccttaaagtag 23536168  T
Q  190 ttgaattccctcaaaacatt 209  Q
    ||||||||||||||||||||    
T  23536169 ttgaattccctcaaaacatt 23536188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 4038077 - 4038197
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||| ||  ||||| |||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||||||||||| |||||    
T  4038077 agtgtgtttgggtgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtag 4038176  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  4038177 ttgaattccctcaaaacatta 4038197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 27935642 - 27935523
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||| || ||| |||||||||||||||||||||||| | |||| |||||||||||| ||||||||||||||| ||||||||| | |||||    
T  27935642 agtgtgtttggatggagaaatattttgagggaatgtaatgttttgaggaaattcaactactttgagttgaattcaaacaatagaattcacctgaaagtag 27935543  T
Q  190 ttgaattccctcaaaacatt 209  Q
    |||||||  |||||||||||    
T  27935542 ttgaattttctcaaaacatt 27935523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 92 - 210
Target Start/End: Original strand, 27804269 - 27804387
Alignment:
Q  92 tgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagtt 191  Q
    ||||||||||||  ||||| ||||||||||||||||| |||||| |||||| ||||| |||||||||||||||||||||| |||||| |||| |||||||    
T  27804269 tgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcaacttaaagtagtt 27804368  T
Q  192 gaattccctcaaaacatta 210  Q
    ||||||| || ||||||||    
T  27804369 gaattccttctaaacatta 27804387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 81 - 209
Target Start/End: Complemental strand, 40264196 - 40264068
Alignment:
Q  81 aactcataaagtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcacc 180  Q
    ||||| || ||||||||||||||  ||||| |||||||| ||||||||||||||| |||||| || || ||||||||| |||||||||||| |||||| |    
T  40264196 aactcttatagtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcatc 40264097  T
Q  181 ttagagtagttgaattccctcaaaacatt 209  Q
    | | |||||||||||||||||||||||||    
T  40264096 tcaaagtagttgaattccctcaaaacatt 40264068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 50005236 - 50005116
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||| |||||| || || ||||||||| |||||||||||| ||||||||| | || ||    
T  50005236 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 50005137  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||| ||||||||||||    
T  50005136 ttgaattcgctcaaaacatta 50005116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 5474437 - 5474521
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||||||| ||||||||| |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  5474437 aatgttttgagggaatttaattactttgaagtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 5474521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 15034661 - 15034781
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||| ||||||||| |||||||||| |    |  ||||||||| | |||||    
T  15034661 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtag 15034760  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  15034761 ttgaattccctcaaaacatta 15034781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 90 - 190
Target Start/End: Complemental strand, 30190293 - 30190193
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| | |||| ||||| |||||||||||||||||||||| ||||| |||||||||||    
T  30190293 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactattttgaggtgaattcaaacaatagaattccccttagagtag 30190194  T
Q  190 t 190  Q
    |    
T  30190193 t 30190193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 34756584 - 34756464
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  | ||| |||||||| ||| ||||||||||| |||||| || || ||||||||| |||||||||||| ||||||||| | |||||    
T  34756584 agtgtgtttggatggggaaatattttgaggtaatataatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtag 34756485  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  34756484 ttgaattccctcaaaacatta 34756464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 90 - 209
Target Start/End: Complemental strand, 32573079 - 32572960
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||| |||||||  ||||| |||||||| ||||||||||||||| |||||| || |  ||||||||| |||||||||||| ||||||||| | |||||    
T  32573079 agtgtgattggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattcttttgaggtggattcaaacaatagaattcacctcaaagtag 32572980  T
Q  190 ttgaattccctcaaaacatt 209  Q
    ||||||||||||||||||||    
T  32572979 ttgaattccctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 93 - 210
Target Start/End: Complemental strand, 28745950 - 28745834
Alignment:
Q  93 gtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttg 192  Q
    ||||||||||||  |||| |||| |||||||||||| |||||| |||||| ||||| |||||||||||||||||||||| ||||||||||| | || |||    
T  28745950 gtgtttggatgagagaatattttaagggaatgtaatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcacctta-aataattg 28745852  T
Q  193 aattccctcaaaacatta 210  Q
    |||||||||||| |||||    
T  28745851 aattccctcaaaccatta 28745834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 38277571 - 38277452
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| |||||||| ||||||||||||||| |||||| || || ||||||||| ||| |||||||| ||||||||| | |||||    
T  38277571 agtgtgtttggatgg-ggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggatttaaacaatataattcacctcaaagtag 38277473  T
Q  190 ttgaattccctcaaaacatta 210  Q
    ||||||||| |||||||||||    
T  38277472 ttgaattccttcaaaacatta 38277452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 45565515 - 45565431
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||| ||||||||||| | ||||||||||||||||||||||||    
T  45565515 aatgttttgagggaattcaactactttgaggtgaatttaaacaatagaattcaccttaaaatagttgaattccctcaaaacatta 45565431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 38277417 - 38277489
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38277417 agtgtgtttggatgagagaatattttgagggaatgtaatgttttgaaggaattcaactactttgaggtgaatt 38277489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 45565397 - 45565515
Alignment:
Q  91 gtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagt 190  Q
    |||||||||||||  ||||| ||||||| |||||||||||||||| |||||| ||||| ||| |||||||||| |    | |||||||||| | ||||||    
T  45565397 gtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactattttaaggtgaattctattgtttaaattcacctcaaagtagt 45565496  T
Q  191 tgaattccctcaaaacatt 209  Q
    |||||||||||||||||||    
T  45565497 tgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 37214843 - 37214939
Alignment:
Q  112 ttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    |||||||| |||||||||||||||  ||||| || || ||||||||| |||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  37214843 ttttgaggtaatgtaatgttttgagagaattcaattattttgaggtggattcaaacaatagaattcacctca-agtagttgaattccctcaaaacatt 37214939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 4038232 - 4038112
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| ||||||||||| |||||||||||| |||||| ||||||||| |||||||||| |    |  || |||||| | |||||    
T  4038232 agtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtag 4038133  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  4038132 ttgaattccctcaaaacatta 4038112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 5458299 - 5458350
Alignment:
Q  37 acacaaagtatttaagcaacatgtcgttgatttgagtgctaaggaactcata 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5458299 acacaaagtatttaagcaacatgtcgttgatttgagtgctaaggaactcata 5458350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 138 - 209
Target Start/End: Original strand, 17502230 - 17502301
Alignment:
Q  138 gaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    ||||| ||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||||||||||    
T  17502230 gaattcaactactttgaggtgaattcaaataatagaattcaacttaaagtagttgaattccctcaaaacatt 17502301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 34756432 - 34756502
Alignment:
Q  93 gtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||  ||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  34756432 gtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 34756502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 8224770 - 8224843
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| |||||| || |||||||| ||||||||    
T  8224770 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattgaaatactttgatgtgaattc 8224843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 26501150 - 26501077
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||| || |||||||| ||||||||    
T  26501150 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtgaattc 26501077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 27804422 - 27804302
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||| |||||| |||||||| |||||||||||| ||||||||| ||||||||| || ||||||| |    |  ||||||||| | | |||    
T  27804422 agtgtgtttggatggaggaatgttttgaggaaatgtaatgtttagaaggaattcaactactttaagttgaattctattgtttgaattcacctcaaaatag 27804323  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||| ||||    
T  27804322 ttgaattccctcaaaatatta 27804302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 15245537 - 15245480
Alignment:
Q  152 tgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  15245537 tgagttgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatt 15245480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 24273291 - 24273218
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||||||||||||||||| ||| |||||| || |||||||||||||||||    
T  24273291 agtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 24273218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 50005081 - 50005154
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||  ||||| |||| |||||||||||||||    
T  50005081 agtgtgtttggatgacggaatattttgagagaatgtaatgttttgagcgaattcaacttctttgaggtgaattc 50005154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 37448465 - 37448399
Alignment:
Q  97 ttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||| ||||| ||||||| |||||||||||||||| ||||||||| |||||||| ||||||||    
T  37448465 ttggatgagggaatgttttgagagaatgtaatgttttgagggaatttaaatactttgatgtgaattc 37448399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 28632656 - 28632584
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||||||  ||||| || |||||||||||||||||    
T  28632656 agtgtgtttggatgagggaatgtttggagggaatgtaatgttttgagagaattcaa-tactttgaggtgaattc 28632584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 47165283 - 47165210
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||| || ||| |||||||| ||||||||||||||| |||||| || |||||| ||||||||||    
T  47165283 agtgtgtttggatggagaaatgttttgaggaaatgtaatgttttgagggaattcaaatactttaaggtgaattc 47165210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 43623049 - 43622977
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||  ||||| |||||| |||||||||||||||||   ||||||| ||||||||||||||||    
T  43623049 agtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaatttaaatactttgaggtgaatt 43622977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 44570697 - 44570753
Alignment:
Q  107 gaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||| ||||||||||||||||||||||||||||||| || ||| |||||||||||||    
T  44570697 gaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattc 44570753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 32288004 - 32287934
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaa 160  Q
    |||||||||||||| |||||  |||||||||||||||||||||||| | |||| || |||||||| |||||    
T  32288004 agtgtgtttggatggaggaaagttttgagggaatgtaatgttttgaggaaattcaaatactttgaagtgaa 32287934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 47074177 - 47074223
Alignment:
Q  130 ttttgaaggaatttaactactttgaggtgaattcaaacaataaaatt 176  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  47074177 ttttgaaggaattcaactactttgaggtgaattcaaacaatagaatt 47074223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 6470757 - 6470684
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| ||||||| |||||||||||||||| |||||| || | |||||||||| ||||    
T  6470757 agtgtgtttggatggcggaatgttttgagagaatgtaatgttttgagggaattcaaattctttgaggtggattc 6470684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 171
Target Start/End: Original strand, 25889160 - 25889240
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaata 171  Q
    ||||| || |||||| ||||| |||||||| ||| |||||||||||||||||| || || ||||||||| ||||||||||||    
T  25889160 agtgtattgggatgagggaatattttgaggtaat-taatgttttgaaggaattcaattattttgaggtggattcaaacaata 25889240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 37447957 - 37447900
Alignment:
Q  106 ggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||| ||| ||||||||||||||||||||||||||| || ||| |||||||||||||    
T  37447957 ggaatatttggagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattc 37447900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 49659219 - 49659291
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| | ||||||||||||||||||  || ||||||||| |||||||||||||||||    
T  49659219 agtgtgtttggatgg-ggaatgtattgagggaatgtaatgttacgagggaatttaaatactttgaggtgaattc 49659291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 37037019 - 37036947
Alignment:
Q  91 gtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||| |||||| || || ||||| || |||||    
T  37037019 gtgtgtttggatgagggaatgttttgagtgaatgtaatgttttgagggaattcaaatattttgatgtaaattc 37036947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 44410468 - 44410348
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||   ||||| |||||||| ||||||| ||||||| |||||| || || |||   ||| ||||| |||||| ||||||||| | | |||    
T  44410468 agtgtgtttggattggggaatattttgaggtaatgtaaagttttgagggaattcaattatttttgagtggattcagacaatagaattcacctcaaaatag 44410369  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||| || |||||||||    
T  44410368 ttgaattcgcttaaaacatta 44410348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 51847855 - 51847926
Alignment:
Q  91 gtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||| |||||| |||||||| ||||||||||||| ||| |||| || |||||| ||||||||||    
T  51847855 gtgtgtttggatggaggaatgttttgaggtaatgtaatgttttaaagaaattcaaatacttt-aggtgaattc 51847926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 31195468 - 31195531
Alignment:
Q  100 gatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||| |||||| |||||||||||||||||||| ||| | ||||||| || ||||||||||||||    
T  31195468 gatggaggaatattttgagggaatgtaatgttctgaggaaatttaaatattttgaggtgaattc 31195531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 5474528 - 5474483
Alignment:
Q  118 gggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||    
T  5474528 gggaatgtaatgttttgagggaattcaactactttaaggtgaattc 5474483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 31166312 - 31166385
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||| ||||| |||||||  ||||||||||||||| |||||  || || |||||| |||||||    
T  31166312 agtgtgtttggatgagggaatgttttgagataatgtaatgttttgatggaatgcaaatattttgagatgaattc 31166385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 39887129 - 39887202
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||| ||||| ||||| |||| ||||||| | ||||||||||| |||| || |||||||| ||||||||    
T  39887129 agtgtgtttagatgagggaatgttttaagggaatatgatgttttgaagaaattcaaatactttgatgtgaattc 39887202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 44410313 - 44410386
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||| ||||||||   |||| |||||||||||||||||||||| |  ||||| ||||| ||||||||||||||    
T  44410313 agtgtatttggatgggagaatgttttgagggaatgtaatgttttaagcgaattcaactattttgaggtgaattc 44410386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 23536188 - 23536104
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||||||| |||||| ||||||||| |||||||||  |    |  ||||||||| | ||||||||||||||||||||||||||    
T  23536188 aatgttttgagggaattcaactactttaaggtgaattatattgtttgaattcacctcaaagtagttgaattccctcaaaacatta 23536104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 28745799 - 28745918
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||| ||||||||  ||||| |||||||||||||||||| ||||| |||||| || || ||| |||||||||| |    |  ||||||||| | | |||    
T  28745799 agtgtatttggatgggggaatattttgagggaatgtaatggtttgagggaattcaatta-tttaaggtgaattctattgtttgaattcacctcaaaatag 28745897  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||| ||||    
T  28745898 ttgaattccctcaaaatatta 28745918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 946378 - 946440
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttg 153  Q
    ||||||||||||||| | |||  |||||||||||||| |||||||| ||||||||| |||||||    
T  946378 agtgtgtttggatga-gaaatgctttgagggaatgtattgttttgagggaatttaaatactttg 946440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 210
Target Start/End: Original strand, 47165201 - 47165248
Alignment:
Q  163 caaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||||  ||||||||||| |||| |||||||||||||||||||||    
T  47165201 caaacaatggaattcaccttaaagtatttgaattccctcaaaacatta 47165248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 206
Target Start/End: Complemental strand, 50471834 - 50471791
Alignment:
Q  163 caaacaataaaattcaccttagagtagttgaattccctcaaaac 206  Q
    ||||||||||||||||||| | |||| |||||||||||||||||    
T  50471834 caaacaataaaattcacctgaaagtatttgaattccctcaaaac 50471791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 10166501 - 10166551
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaa 140  Q
    |||||||||||||||  |||| ||||| || ||||||||||||||||||||    
T  10166501 agtgtgtttggatgagagaatgttttgtggtaatgtaatgttttgaaggaa 10166551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 29446768 - 29446824
Alignment:
Q  106 ggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||| |||||| ||||||||||||||||| |||||| ||||| ||| ||||||||||    
T  29446768 ggaatgttttgaaggaatgtaatgttttgagggaattcaacta-tttaaggtgaattc 29446824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 32572960 - 32572997
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  32572960 aatgttttgagggaattcaactactttgaggtgaattc 32572997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 47542031 - 47541987
Alignment:
Q  118 gggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||||||| |||  |||||||| ||||||||||||||||    
T  47542031 gggaatgtaatgttatgagagaatttaaatactttgaggtgaatt 47541987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 1107053 - 1107174
Alignment:
Q  90 agtgtgtttggatgaaggaattttttga-gggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagta 188  Q
    ||||||||||||||| | |||||||| | ||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||    
T  1107053 agtgtgtttggatgaggaaatttttttaagggaatgtaatgttttgaaggaattcaactactttgagatgaattcaaacaatagaattcaccttagagta 1107152  T
Q  189 gttgaattccctcaaaacatta 210  Q
    ||||||||||||||||||||||    
T  1107153 gttgaattccctcaaaacatta 1107174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 857396 - 857276
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  | ||| |||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||||||||||| |||||    
T  857396 agtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtag 857297  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  857296 ttgaattccctcaaaacatta 857276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 90 - 205
Target Start/End: Complemental strand, 41498647 - 41498532
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||| || || ||||||||||||| |||||||| ||||||||||| ||| |    
T  41498647 agtgtgtttggatggaggaatattttgagggaatgtaatgttttgaaggaattcaattattttgaggtgaatttaaacaatagaattcaccttaaagtgg 41498548  T
Q  190 ttgaattccctcaaaa 205  Q
    ||||||||||||||||    
T  41498547 ttgaattccctcaaaa 41498532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 81 - 209
Target Start/End: Original strand, 11040961 - 11041088
Alignment:
Q  81 aactcataaagtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcacc 180  Q
    ||||| || ||||||||||||||  ||||| ||||||||||||||||||||||||  ||||| |||||||||||||||||| ||||||||| ||||||||    
T  11040961 aactcttagagtgtgtttggatgg-ggaatattttgagggaatgtaatgttttgagagaattcaactactttgaggtgaatccaaacaatagaattcacc 11041059  T
Q  181 ttagagtagttgaattccctcaaaacatt 209  Q
     || |||||||||||||||||||||||||    
T  11041060 ataaagtagttgaattccctcaaaacatt 11041088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 28846028 - 28845908
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  | ||| |||||||||||| ||||||||||| |||||| |||||||||||| ||||||||||||||| ||||||||||| |||||    
T  28846028 agtgtgtttggatggggaaatgttttgagggaatataatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtag 28845929  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||| ||||||||    
T  28845928 ttgaattccctcgaaacatta 28845908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 7352969 - 7352849
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  | ||| |||||||||||||||||||||||| |||||| |||||||||||  ||||||||||||||| ||||||||||| | |||    
T  7352969 agtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgaattgaattcaaacaatagaattcaccttaaaatag 7352870  T
Q  190 ttgaattccctcaaaacatta 210  Q
    ||||||||| |||||||||||    
T  7352869 ttgaattccatcaaaacatta 7352849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 10127976 - 10128096
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| |||||| | |||||||||||||||||||||| || || ||||||||| |||||||||||| |||||| || | |||||    
T  10127976 agtgtgtttggatgggggaatattttgaagtaatgtaatgttttgaaggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagtag 10128075  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  10128076 ttgaattccctcaaaacatta 10128096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 26250911 - 26251030
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||| | |||| || || ||||||||| ||||||| |||| ||||||||| | |||||    
T  26250911 agtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaggaaattcaattattttgaggtggattcaaataatagaattcacctcaaagtag 26251010  T
Q  190 ttgaattccctcaaaacatt 209  Q
    ||||||||||||||||||||    
T  26251011 ttgaattccctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 90 - 183
Target Start/End: Complemental strand, 49111469 - 49111376
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcacctta 183  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||| ||||| |||||    
T  49111469 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaattcaaacaatagaattcccctta 49111376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 15660185 - 15660305
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||   ||||| |||||||| ||||||||||||||| |||||| || || |||||| || |||||||||||| |||||| || | |||||    
T  15660185 agtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgagatggattcaaacaatagaattcagctcaaagtag 15660284  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  15660285 ttgaattccctcaaaacatta 15660305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 12914051 - 12914119
Alignment:
Q  141 tttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    |||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  12914051 tttaactactttgaggtgaattcaaacaataaaattcatcttaaaatagttgaattccctcaaaacatt 12914119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 14982282 - 14982354
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  14982282 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaatttaactactttaaggtgaatt 14982354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 14982396 - 14982317
Alignment:
Q  130 ttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||| |||||| ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||    
T  14982396 ttttgagggaattcaactactttgaggtgaattcaaa-aataaaattcaccttaaagtagttaaattccctcaaaacatta 14982317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 36456007 - 36455944
Alignment:
Q  147 tactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  36456007 tactttgaggtgaattcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 36455944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 15660340 - 15660267
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| |||||| |||||||||||| |||||||    
T  15660340 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattc 15660267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 93 - 210
Target Start/End: Original strand, 28845876 - 28845993
Alignment:
Q  93 gtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttg 192  Q
    ||||||||||| |||||| ||||||||||||||||||||| || |||||| ||||||||| |||||||||| |    |  |||||| || | ||||||||    
T  28845876 gtgtttggatggaggaatgttttgagggaatgtaatgtttcgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttg 28845975  T
Q  193 aattccctcaaaacatta 210  Q
    ||||||||||||||||||    
T  28845976 aattccctcaaaacatta 28845993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 42844700 - 42844580
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  | ||| |||||||| ||||||||||||||| |||| | || || ||||| ||| |||||||||||| ||||||||| | |||||    
T  42844700 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaaatcaattattttgaagtggattcaaacaatagaattcacctcaaagtag 42844601  T
Q  190 ttgaattccctcaaaacatta 210  Q
    ||||||||| |||||| ||||    
T  42844600 ttgaattccttcaaaatatta 42844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 7352811 - 7352934
Alignment:
Q  87 taaagtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagag 186  Q
    |||||||||||||||||  ||||| |||||||||||||||||||||||| |||||| ||||| ||| |||||||||| |    |  ||||||  | | ||    
T  7352811 taaagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgatggaattcaactattttaaggtgaattctattgtttgaattcaattcaaag 7352910  T
Q  187 tagttgaattccctcaaaacatta 210  Q
    ||||||||||||||||||||||||    
T  7352911 tagttgaattccctcaaaacatta 7352934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 4896789 - 4896716
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  | ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  4896789 agtgtgtttggatggggaaatattttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 4896716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 1539649 - 1539715
Alignment:
Q  96 tttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||| |||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  1539649 tttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaatt 1539715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 160
Target Start/End: Original strand, 16516173 - 16516243
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaa 160  Q
    ||||||||||||||  ||||| |||||| ||||||||||||||||||||||||||| |||||||| |||||    
T  16516173 agtgtgtttggatgggggaatgttttgacggaatgtaatgttttgaaggaatttaaatactttgatgtgaa 16516243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 36455909 - 36455982
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||||||||| ||||||||||| |||||| ||||||||| ||||||||||    
T  36455909 agtgtgtttggatgggggaatgttttgagggaatctaatgttttgagggaattcaactactttaaggtgaattc 36455982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 36456083 - 36456010
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||| | |||| ||||||||| ||||||||||    
T  36456083 agtgtgtttggatggaggaatgttttgagggaatgtaatattttgaggaaattcaactactttaaggtgaattc 36456010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 42844561 - 42844618
Alignment:
Q  106 ggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  42844561 ggaatgttttgagggaatgtaatattttgaaggaattcaactactttgaggtgaattc 42844618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 1112607 - 1112679
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||  ||||| |||||||| |||||||||||| || |||||| |||||||||||||||||||    
T  1112607 agtgtgtttggatgggggaatgttttgaggaaatgtaatgtttcgagggaattcaactactttgaggtgaatt 1112679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 31473851 - 31473923
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||  ||||| |||||||||||||||||||| ||| |||||| || ||||||||||||||||    
T  31473851 agtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaatt 31473923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 857266 - 857361
Alignment:
Q  115 tgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||||||| |    |  |||||| || | ||||||||||||||||||||||||||    
T  857266 tgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacatta 857361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 10633035 - 10633106
Alignment:
Q  91 gtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||||||  ||||| |||||||||||||||||||| ||| |||||| || ||||||||||||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaatt 10633106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 467958 - 467879
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaata 171  Q
    |||||||||||||| || ||| |||||| ||||||||||||||||| |||||| ||| ||||||| ||||||||||||||||    
T  467958 agtgtgtttggatggag-aatgttttgatggaatgtaatgttttga-ggaattcaaccactttgaagtgaattcaaacaata 467879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 2125859 - 2125932
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||||| |||||| || ||||||| |||||||||    
T  2125859 agtgtgtttggatgggggaatattttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 2125932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 10128131 - 10128058
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||| ||||||||  ||||| ||||||| |||||||||||||||| |||||| |||||||||||| |||||||    
T  10128131 agtgtatttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgagatgaattc 10128058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 1107209 - 1107089
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||| ||||||||  ||||| |||||||||||| ||||||||||| |||||| ||||||| | |||||||||| |    |  |||||| || | |||||    
T  1107209 agtgtatttggatgggggaatattttgagggaatataatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcatctcaaagtag 1107110  T
Q  190 ttgaattccctcaaaacatta 210  Q
    ||||||||| |||||||||||    
T  1107109 ttgaattccttcaaaacatta 1107089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 4441449 - 4441396
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcac 179  Q
    |||||||||| | |||| |||||||||||||||||||||||||||| |||||||    
T  4441449 aatgttttgaggaaattcaactactttgaggtgaattcaaacaatagaattcac 4441396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 31742921 - 31742876
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttga 135  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||    
T  31742921 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttga 31742876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 55266852 - 55266897
Alignment:
Q  165 aacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||    
T  55266852 aacaataaaattcaccttaaagtagttgaattccctcaaaatatta 55266897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 4441339 - 4441391
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatt 142  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| ||||||    
T  4441339 agtgtgtttggatggtggaatgttttgagggaatgtaatgttttgagggaatt 4441391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 55266932 - 55266860
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||||||| | |||| |||||||| ||| |||| |||||| |||||| ||||||||| |||||||||    
T  55266932 agtgtgtttggatggatgaatgttttgaggaaatataatattttgagggaattcaactactttaaggtgaatt 55266860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 11348394 - 11348327
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggt 157  Q
    ||||| ||||||||  ||||| |||| ||||||||||||||||||| |||||| ||| ||||||||||    
T  11348394 agtgtatttggatgggggaatgttttaagggaatgtaatgttttgagggaattcaacaactttgaggt 11348327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 4896650 - 4896716
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgagg 156  Q
    ||||||||||||||  ||||| |||||||| ||||||||||||||| |||||| || || |||||||    
T  4896650 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgagg 4896716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 1112775 - 1112706
Alignment:
Q  94 tgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||  || || |||||||  |||||||||||| || |||||| ||||||||||||||||||||    
T  1112775 tgtttggatggggggatgttttgagcaaatgtaatgtttcgagggaattcaactactttgaggtgaattc 1112706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 5715746 - 5715815
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtga 159  Q
    ||||||||||||||| ||||| |||||||  ||||||||||||||| | |||| || |||||||| ||||    
T  5715746 agtgtgtttggatgagggaatgttttgagataatgtaatgttttgaggtaattcaaatactttgatgtga 5715815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 35470124 - 35470197
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||| ||||  | ||| ||||||||||||||| |||||||| |||||| || ||||||| |||||||||    
T  35470124 agtgtgtttagatggtgaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattc 35470197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 42543024 - 42542979
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttga 135  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||    
T  42543024 agtgtgtttggatggtggaatgttttgagggaatgtaatgttttga 42542979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 29091164 - 29091212
Alignment:
Q  115 tgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||||||||| |||||| || |||||||| ||||||||    
T  29091164 tgagggaatgtaatgttttgagggaattcaaatactttgatgtgaattc 29091212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 1539725 - 1539678
Alignment:
Q  163 caaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||||| |||||||||| | |||| |||||||||||||||||||||    
T  1539725 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacatta 1539678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 9451205 - 9451158
Alignment:
Q  88 aaagtgtgtttggatgaaggaattttttgagggaatgtaatgttttga 135  Q
    ||||| ||||||||||||||||| |||| ||| |||||||||||||||    
T  9451205 aaagtttgtttggatgaaggaatgttttaaggtaatgtaatgttttga 9451158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 31473933 - 31473886
Alignment:
Q  163 caaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||||||||||||||| | |||| ||||||||||||| |||||||    
T  31473933 caaacaataaaattcacctcaaagtatttgaattccctcataacatta 31473886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 31742778 - 31742845
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggt 157  Q
    |||||||||||||| |||||| |||| ||| | ||||||||||||| |||||| || || ||||||||    
T  31742778 agtgtgtttggatggaggaatattttaaggtagtgtaatgttttgagggaattcaattattttgaggt 31742845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 46242593 - 46242542
Alignment:
Q  112 ttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||| ||| |||||||||||||||||  || |||||||||||||||||    
T  46242593 ttttgaggaaatataatgttttgaaggaatcaaaatactttgaggtgaattc 46242542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 4896717 - 4896754
Alignment:
Q  173 aattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  4896717 aattcacctcaaagtagttgaattccctcaaaacatta 4896754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 26251030 - 26250993
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  26251030 aatgttttgagggaattcaactactttgaggtgaattc 26250993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 17110871 - 17110991
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  | ||| |||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| ||||||||||| |||||    
T  17110871 agtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagtag 17110970  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  17110971 ttgaattccctcaaaacatta 17110991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 13404829 - 13404949
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  | ||| |||||||| ||||||||||||||| |||||| || || ||||||||| ||||||||||||||||||| || | |||||    
T  13404829 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaataaaattcatctcaaagtag 13404928  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  13404929 ttgaattccctcaaaacatta 13404949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 87 - 209
Target Start/End: Original strand, 30435245 - 30435365
Alignment:
Q  87 taaagtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagag 186  Q
    |||| |||||||||||| || ||| ||||||||||||||||||||| || |||||||||||| |||||| |||||| |||||||| |||| |||||| |     
T  30435245 taaaatgtgtttggatggagaaatgttttgagggaatgtaatgtttggagggaatttaacta-tttgagttgaatttaaacaatagaatttacctta-aa 30435342  T
Q  187 tagttgaattccctcaaaacatt 209  Q
    |||||||||||||||||||||||    
T  30435343 tagttgaattccctcaaaacatt 30435365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 3853773 - 3853653
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  | ||| |||||||| |||||||||||| || |||||| || || ||||||||| |||||||||||| ||||||||| | |||||    
T  3853773 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtag 3853674  T
Q  190 ttgaattccctcaaaacatta 210  Q
    ||||||| |||||||||||||    
T  3853673 ttgaatttcctcaaaacatta 3853653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 3858231 - 3858111
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  | ||| |||||||| |||||||||||| || |||||| || || ||||||||| |||||||||||| ||||||||| | |||||    
T  3858231 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtag 3858132  T
Q  190 ttgaattccctcaaaacatta 210  Q
    ||||||| |||||||||||||    
T  3858131 ttgaatttcctcaaaacatta 3858111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 14799999 - 14800082
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||||||| |||||| ||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  14799999 aatgttttgagggaattaaacta-tttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacatta 14800082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 17111026 - 17110906
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||| || ||| |||||||||||||||||||||||| |||||| ||||||||| |||||||||| |    |  |||||| || | |||||    
T  17111026 agtgtgtttggatggagaaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtag 17110927  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  17110926 ttgaattccctcaaaacatta 17110906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 24044962 - 24045035
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||| || ||| |||||||||||||    
T  24044962 agtgtgtttggatgagggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattc 24045035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 3853618 - 3853691
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| | |||| ||||||||||||||||||||    
T  3853618 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaattc 3853691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 3858076 - 3858149
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| | |||| ||||||||||||||||||||    
T  3858076 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaattc 3858149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 28324743 - 28324671
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||| || ||| ||||| ||||||    
T  28324743 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgagctgaatt 28324671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 113 - 210
Target Start/End: Complemental strand, 33902801 - 33902704
Alignment:
Q  113 tttgagggaatgtaatgttttgaaggaatttaa-ctactttgaggtgaattcaaa-caataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||||||||||  |||||||| |||||| || ||||||||||||||||||||| ||||| ||||||||  | ||||||||||||||||||||||||||    
T  33902801 tttgagggaatgttttgttttgagggaattcaaactactttgaggtgaattcaaaacaatagaattcacc--aaagtagttgaattccctcaaaacatta 33902704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 33902669 - 33902732
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttg 153  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||| ||||||||||    
T  33902669 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttg 33902732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 161
Target Start/End: Original strand, 40046806 - 40046877
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaat 161  Q
    |||||||||||||| | |||| |||||||||||||||||||||||| |||||| |||||||||||| |||||    
T  40046806 agtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaat 40046877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 165
Target Start/End: Complemental strand, 42711437 - 42711362
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaa 165  Q
    |||||||||||||   ||||| |||||||||||||||||||||||| |||||| |||||||||||| |||||||||    
T  42711437 agtgtgtttggattggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattcaa 42711362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 44889356 - 44889429
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||| |||||| |||||||||||| ||||||||||| |||||| || |||||||| ||||||||    
T  44889356 agtgtgtttggatggaggaatgttttgagggaatataatgttttgagggaattcaaatactttgatgtgaattc 44889429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 150 - 210
Target Start/End: Original strand, 4156229 - 4156289
Alignment:
Q  150 tttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||| ||||||||||||||| |||||| |||| ||||||||||||||||||||||||||    
T  4156229 tttgagttgaattcaaacaatagaattcatcttaaagtagttgaattccctcaaaacatta 4156289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 130 - 209
Target Start/End: Complemental strand, 42740048 - 42739969
Alignment:
Q  130 ttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    |||||| |||||| || || ||||||||| |||| |||||||||||||| || | |||||||||||||||||||||||||    
T  42740048 ttttgagggaattcaattattttgaggtggattctaacaataaaattcatctcaaagtagttgaattccctcaaaacatt 42739969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 37268164 - 37268086
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaaca 168  Q
    |||||||||||||   ||||| |||||||| ||||||||||||||| ||||||||| || ||||||||| |||||||||    
T  37268164 agtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaatttaattattttgaggtggattcaaaca 37268086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 4156324 - 4156251
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||   |||| |||||||||||||||||||||||| |||||| ||||||||| || |||||||    
T  4156324 agtgtgtttggatgggagaatattttgagggaatgtaatgttttgagggaattcaactactttaagatgaattc 4156251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 11744800 - 11744727
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||||  |||| ||| |||||||||||||||| |||||||||| ||||| ||| ||||||||||    
T  11744800 agtgtgtttggatgagagaatatttagagggaatgtaatgttgtgaaggaattcaactagtttaaggtgaattc 11744727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 38573433 - 38573514
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaaca 207  Q
    |||||||||| | |||| ||||||||| || ||||||||||||||| |||||| || | |||||||||||| ||||||||||    
T  38573433 aatgttttgaggaaattcaactacttttagttgaattcaaacaatagaattcaactcaaagtagttgaatttcctcaaaaca 38573514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 13404968 - 13404912
Alignment:
Q  106 ggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||| |||||||||||||||||||||||| |||||| |||||||||||| ||||||    
T  13404968 ggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagatgaatt 13404912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 14800117 - 14800045
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||  ||||| ||||||||||| |||||||||||| |||||| ||||||||  |||||||||    
T  14800117 agtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactacttcaaggtgaatt 14800045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 35979084 - 35979012
Alignment:
Q  91 gtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||| |||||| ||||||||||||||||| ||  || |||||| || |||||||||||||||||    
T  35979084 gtgtgtttggatggaggaatgttttgagggaatgtaatcttaagagggaattcaaatactttgaggtgaattc 35979012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 36103103 - 36103175
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||||||| |||||| |||||||||||||||||||||| | | |||| || |||||||| |||||||    
T  36103103 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgatgtgaatt 36103175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 23011736 - 23011809
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||| |   |||| |||||||||||||||||||| ||| |||||| || |||||||||||||||||    
T  23011736 agtgtgtttggacgggagaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattc 23011809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 29257432 - 29257359
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||| | |||||| || ||||||| |||||||||    
T  29257432 agtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 29257359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 29482888 - 29482815
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| ||||||||||| ||| |||||||| |||||| || ||||||| |||||||||    
T  29482888 agtgtgtttggatgggggaatgttttgagggaacgtattgttttgagggaattcaaatactttggggtgaattc 29482815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 33377378 - 33377305
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||  ||||| |||||||||||| || |||||||| |||||| || ||||||| |||||||||    
T  33377378 agtgtgtttggatgggggaatgttttgagggaatatattgttttgagggaattcaaatactttggggtgaattc 33377305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 515613 - 515541
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||||||| |||||| |||||| ||||||||||||||| | ||| || || |||||||| |||||||    
T  515613 agtgtgtttggatggaggaatgttttgaaggaatgtaatgttttaagggagttcaaatactttgatgtgaatt 515541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 44346757 - 44346686
Alignment:
Q  92 tgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||  ||||| ||||||||||||||| |||||| | |||||| || ||||||| |||||||||    
T  44346757 tgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattc 44346686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 8689138 - 8689196
Alignment:
Q  94 tgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactacttt 152  Q
    |||||||||| || ||| |||||| ||||||||||||||||| |||||| |||||||||    
T  8689138 tgtttggatggagaaatgttttgaaggaatgtaatgttttgagggaattcaactacttt 8689196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 32626065 - 32626028
Alignment:
Q  173 aattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  32626065 aattcaccttaaagtagttgaattccctcaaaacatta 32626028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 14241 - 14312
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||  ||||| ||| |||||||||||||||||| | |||||| || ||||||| ||||||||    
T  14241 agtgtgtttggatgg-ggaatgtttggagggaatgtaatgttttaagggaattcaaatactttggggtgaatt 14312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 8049272 - 8049328
Alignment:
Q  106 ggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||| |||||||||||| ||||||||||| |||||| || ||||||||||| ||||    
T  8049272 ggaatgttttgagggaatataatgttttgagggaattcaaatactttgaggtaaatt 8049328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 33986006 - 33986078
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||  ||||| | |||| | |||||||||||||||  ||||| || ||||||||||||||||    
T  33986006 agtgtgtttggatgggggaatgtcttgaagtaatgtaatgttttgagagaattcaaatactttgaggtgaatt 33986078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 141
Target Start/End: Complemental strand, 27322730 - 27322679
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaat 141  Q
    ||||||||||||||   |||| |||||||||||||||||||||| |||||||    
T  27322730 agtgtgtttggatgggagaatgttttgagggaatgtaatgttttaaaggaat 27322679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 40046931 - 40046872
Alignment:
Q  106 ggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaa 165  Q
    ||||| |||||||| ||||||||||||||| |||||| || || ||||||||| ||||||    
T  40046931 ggaatgttttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaa 40046872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 9982642 - 9982711
Alignment:
Q  93 gtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||| || ||| |||| ||| |||||||||||||||  |||||||| || ||||||||||||||    
T  9982642 gtgtttggatggag-aatgttttaaggtaatgtaatgttttgagagaatttaaatattttgaggtgaattc 9982711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 209
Target Start/End: Complemental strand, 29611454 - 29611408
Alignment:
Q  163 caaacaataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    |||||||| |||||||||| | |||| ||||||||||||||||||||    
T  29611454 caaacaatgaaattcacctcaaagtatttgaattccctcaaaacatt 29611408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 31807411 - 31807468
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaacta 148  Q
    |||||||||||||||  |||| |||||||| ||||||||||||||| |||||| |||||    
T  31807411 agtgtgtttggatgagagaatgttttgagg-aatgtaatgttttgagggaattcaacta 31807468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 7202922 - 7202885
Alignment:
Q  172 aaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    |||||||||| | |||||||||||||||||||||||||    
T  7202922 aaattcacctcaaagtagttgaattccctcaaaacatt 7202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 14991694 - 14991739
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttga 135  Q
    ||||||||||||||  ||||| |||||||| |||||||||||||||    
T  14991694 agtgtgtttggatgggggaatgttttgaggtaatgtaatgttttga 14991739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 32626023 - 32626068
Alignment:
Q  120 gaatgtaatgttttgaaggaatttaactactttgaggtgaattcaa 165  Q
    |||| ||||||||||| |||||| ||||||||| ||||||||||||    
T  32626023 gaatataatgttttgagggaattcaactactttaaggtgaattcaa 32626068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 32626115 - 32626070
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttga 135  Q
    |||||| |||||||  ||||| ||||||||||||||||||||||||    
T  32626115 agtgtgcttggatgggggaatcttttgagggaatgtaatgttttga 32626070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 123
Target Start/End: Complemental strand, 36625288 - 36625255
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaat 123  Q
    ||||||||||||||||||||| ||||||||||||    
T  36625288 agtgtgtttggatgaaggaatattttgagggaat 36625255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 7202885 - 7202921
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||| |||||| |||||||||||||||||||    
T  7202885 aatgttttgagggaattcaactactttgaggtgaatt 7202921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 11744717 - 11744765
Alignment:
Q  162 tcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||||||| ||||||||||| | |||||||||||| ||| |||||||    
T  11744717 tcaaacaatagaattcaccttaaactagttgaattccttcacaacatta 11744765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 562 - 442
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| |||||||| |  |||||    
T  562 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtag 463  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  462 ttgaattccctcaaaacatta 442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 407 - 527
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| |||||||||||  ||||||||||| |||||| ||||||||   ||||||||| |    |  || |||||| | |||||    
T  407 agtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaactacttcagggtgaattctattgtttgaactcacctcaaagtag 506  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  507 ttgaattccctcaaaacatta 527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 2031 - 2151
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| |||||||| |  |||||    
T  2031 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtag 2130  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  2131 ttgaattccctcaaaacatta 2151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 2186 - 2066
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| |||||||||||  ||||||||||| |||||| ||||||||   ||||||||| |    |  || |||||| | |||||    
T  2186 agtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaactacttcagggtgaattctattgtttgaactcacctcaaagtag 2087  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  2086 ttgaattccctcaaaacatta 2066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 6919710 - 6919829
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| | | |    
T  6919710 agtgtgtttggatggaggaatggtttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacctta-aatgg 6919808  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  6919809 ttgaattccctcaaaacatta 6919829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 9763169 - 9763049
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||| |||||| || || | ||||||| |||||||||||| ||||||||| | |||||    
T  9763169 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattcaattattgtgaggtggattcaaacaatagaattcacctcaaagtag 9763070  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  9763069 ttgaattccctcaaaacatta 9763049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 210
Target Start/End: Original strand, 776082 - 776202
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||| |||| || ||| |||||||||||||||||||||||| | |||| ||||||||| || | ||||||||||||| ||||||||||| |||||    
T  776082 agtgtgtttagatggagaaatgttttgagggaatgtaatgttttgaggaaattcaactactttaagttaaattcaaacaatagaattcaccttaaagtag 776181  T
Q  190 ttgaattccctcaaaacatta 210  Q
    ||||||| |||||||||||||    
T  776182 ttgaatttcctcaaaacatta 776202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 9285768 - 9285684
Alignment:
Q  126 aatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||| |||||| || | ||||||||||||||||||||||||||    
T  9285768 aatgttttgagggaattcaactactttgagatgaattcaaacaatagaattcagctcaaagtagttgaattccctcaaaacatta 9285684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 9285649 - 9285768
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||| |||||| |||||||||||| ||||||| |    |  |||||| || | |||||    
T  9285649 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattctattgtttgaattcatctcaaagtag 9285748  T
Q  190 ttgaattccctcaaaacatt 209  Q
    ||||||||||||||||||||    
T  9285749 ttgaattccctcaaaacatt 9285768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 92 - 162
Target Start/End: Complemental strand, 15299579 - 15299510
Alignment:
Q  92 tgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15299579 tgtgtttggatgg-ggaatgttttgagggaatgtaatgttttgaaggaattcaactactttgaggtgaatt 15299510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 9763014 - 9763087
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||| |  | ||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  9763014 agtgtgtttggaaggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 9763087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 29889505 - 29889432
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||| |||||| |||||| ||||||||||||||||| |||||| || |||||||| ||||||||    
T  29889505 agtgtgtttggatggaggaatgttttgatggaatgtaatgttttgagggaattcaaatactttgatgtgaattc 29889432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 34245051 - 34244978
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| |||||| || |||||||| || |||||    
T  34245051 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtaaattc 34244978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 90 - 210
Target Start/End: Complemental strand, 6919864 - 6919745
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtag 189  Q
    ||||||||||||||  ||||| ||||||||||| |||||||||||| |||||| ||| | ||| |||||||||| |    |  ||||||||| | |||||    
T  6919864 agtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaacca-tttaaggtgaattctattgtttgaattcacctcaaagtag 6919766  T
Q  190 ttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||    
T  6919765 ttgaattccctcaaaacatta 6919745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 28918167 - 28918239
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||||||||||| |||||| |||||||||||||||||||||| | | |||| || ||||||||||||||||    
T  28918167 agtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgaggtgaatt 28918239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 210
Target Start/End: Complemental strand, 776215 - 776117
Alignment:
Q  112 ttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||||||||||||||||||||| | |||| ||||||||| |||||||||| |    |  |||| | |||| |||||||||||| |||||||||||||    
T  776215 ttttgagggaatgtaatgttttgaggaaattcaactactttaaggtgaattctattgtttgaatttaacttaaagtagttgaatttcctcaaaacatta 776117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 13487277 - 13487349
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||| ||||  ||||| ||||||||||||||| |||| ||| |||||| || ||||||||||||||||    
T  13487277 agtgtgtttagatgggggaatgttttgagggaatgtagtgttatgagggaattcaaatactttgaggtgaatt 13487349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 34364770 - 34364818
Alignment:
Q  115 tgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  34364770 tgagggaatgtaatgttatgagggaatttaaatactttgaggtgaattc 34364818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 160
Target Start/End: Original strand, 15299416 - 15299471
Alignment:
Q  105 aggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaa 160  Q
    |||||| ||||||| ||||||||||||||||  ||||| |||||||||||||||||    
T  15299416 aggaatgttttgagcgaatgtaatgttttgagagaattcaactactttgaggtgaa 15299471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 8574697 - 8574759
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactacttt 152  Q
    ||||||||||||||  | ||| ||||||| |||||||||||||||| |||||| |||||||||    
T  8574697 agtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattcaactacttt 8574759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 8574822 - 8574760
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactacttt 152  Q
    ||||||||||||||  | ||| ||||||| |||||||||||||||| |||||| |||||||||    
T  8574822 agtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattcaactacttt 8574760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 1368479 - 1368552
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||| |||||| ||||||| ||||||||| |||| | |||||| || |  ||||||||||||||    
T  1368479 agtgtgtttggatggaggaatgttttgagagaatgtaatattttaagggaattcaaatgttttgaggtgaattc 1368552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 9697489 - 9697537
Alignment:
Q  115 tgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||| |||||||||||||||| || |||||||| ||||||||    
T  9697489 tgagggaatgtgatgttttgaaggaattcaaatactttgatgtgaattc 9697537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 6358300 - 6358249
Alignment:
Q  112 ttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||| |||||||||||||||  |||||||| ||||||| |||||||||    
T  6358300 ttttgaggtaatgtaatgttttgagagaatttaaatactttgtggtgaattc 6358249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 15832470 - 15832540
Alignment:
Q  92 tgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||| | ||| ||| || ||||||||||||||| | |||||| || ||||||| ||||||||    
T  15832470 tgtgtttggatgaggtaatgtttcgaaggaatgtaatgttttaagggaattcaaatactttggggtgaatt 15832540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 118 - 210
Target Start/End: Original strand, 56304 - 56396
Alignment:
Q  118 gggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  56304 gggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacatta 56396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 92 - 210
Target Start/End: Complemental strand, 56429 - 56311
Alignment:
Q  92 tgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattcaaacaataaaattcaccttagagtagtt 191  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||| |||||| ||||||||| |||||||||| |    |  || |||||| | |||||||    
T  56429 tgtgtttggatgagggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagtt 56330  T
Q  192 gaattccctcaaaacatta 210  Q
    |||||||||||||||||||    
T  56329 gaattccctcaaaacatta 56311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 54; Significance: 3e-22; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 41999 - 42072
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||| ||| |||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  41999 agtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 42072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 42076 - 42034
Alignment:
Q  168 aataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    |||| ||||||||| | ||||||||||||||||||||||||||    
T  42076 aatagaattcacctcaaagtagttgaattccctcaaaacatta 42034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 42135 - 42090
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttga 135  Q
    ||||||||||||||  ||||  ||||||||||||||||||||||||    
T  42135 agtgtgtttggatgggggaacgttttgagggaatgtaatgttttga 42090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 4077 - 4150
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||| ||||||| ||||||| |||||||||||||||| |||||| || |||||||||||||||||    
T  4077 agtgtgtttggataaaggaatgttttgagagaatgtaatgttttgagggaattcaaatactttgaggtgaattc 4150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 4159 - 4112
Alignment:
Q  163 caaacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||||| ||||||||| | |||| |||||||||||||||||||||    
T  4159 caaacaatagaattcacctcaaagtatttgaattccctcaaaacatta 4112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 82945 - 83018
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||   |||| |||||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  82945 agtgtgtttggatgggtgaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattc 83018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 83025 - 82980
Alignment:
Q  165 aacaataaaattcaccttagagtagttgaattccctcaaaacatta 210  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  83025 aacaatagaattcaccttaaagtagttgaattccctcaaaacatta 82980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 19198 - 19272
Alignment:
Q  88 aaagtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||||  ||| | ||||||||||||||||||||||| ||||||| || || ||||||||||||||    
T  19198 aaagtgtgtttggatgggggagtattttgagggaatgtaatgttttg-aggaattcaaatattttgaggtgaattc 19272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 19855 - 19784
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    ||||||||||||||  ||| | |||||||||||||||||||||| |   |||| || ||||||||||||||||    
T  19855 agtgtgtttggatggggga-tgttttgagggaatgtaatgttttaagaaaattcaaatactttgaggtgaatt 19784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 4569 - 4496
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||| | |||| || || |||| |||||||||    
T  4569 agtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattc 4496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 5213 - 5140
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||| | |||| || || |||| |||||||||    
T  5213 agtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattc 5140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 7153 - 7226
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||||||| |||||| ||||||||||||||| |||||| | |||||| || |||||||  ||||||||    
T  7153 agtgtgtttggatggaggaatgttttgagggaatgtattgttttaagggaattcaaatactttggagtgaattc 7226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 10888 - 10961
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    |||||||||| ||| | |||| |||| ||||||||||||||||||| |||||| || |||||||| ||||||||    
T  10888 agtgtgtttgaatggaagaatgttttaagggaatgtaatgttttgagggaattcaaatactttgacgtgaattc 10961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 11276 - 11324
Alignment:
Q  114 ttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaatt 162  Q
    |||||| ||||||||||| |||||||||| || ||||||||||| ||||    
T  11276 ttgaggaaatgtaatgttatgaaggaattcaaatactttgaggtaaatt 11324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 17561 - 17620
Alignment:
Q  150 tttgaggtgaattcaaacaataaaattcaccttagagtagttgaattccctcaaaacatt 209  Q
    ||||||||| |  ||||||||||||| ||||| | || ||||||||||||||||||||||    
T  17561 tttgaggtggaaccaaacaataaaatgcacctcaaaggagttgaattccctcaaaacatt 17620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 2869 - 2941
Alignment:
Q  90 agtgtgtttggatgaaggaattttttgagggaatgtaatgttttgaaggaatttaactactttgaggtgaattc 163  Q
    ||||||||| ||||  ||||| ||| ||| |||||||||||||||| |||||| || || ||||||||||||||    
T  2869 agtgtgtttagatgggggaatgtttcgagagaatgtaatgttttgagggaattcaaata-tttgaggtgaattc 2941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University