View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17959_low_7 (Length: 519)
Name: NF17959_low_7
Description: NF17959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17959_low_7 |
 | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 304; Significance: 1e-171; HSPs: 38)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 7 - 504
Target Start/End: Complemental strand, 10035302 - 10034810
Alignment:
| Q |
7 |
gtagcataggacccatgagatgatatgaaaatattaagaggtgtgtcgtacagatgattgattattggcagttttctggtaggaactgtggaacatacct |
106 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10035302 |
gtagcagaggacccatgagatgatatgaaaatattaagaggtgtgtcgtacagatgattgattattggc---tttctggtaggaactgtggaacatacct |
10035206 |
T |
|
| Q |
107 |
gaaactggaacacaacttgttctcatgatattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttccttccttttata |
206 |
Q |
| |
|
|||| |||||||||||||| || || ||||||||||||| | |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10035205 |
gaaatgggaacacaacttgt-ct-atcatattgtgacttcatgatttatatctatgaaagggatgtgagcaattttggaccaatgttccttccttttata |
10035108 |
T |
|
| Q |
207 |
cctttctactaacaatggacatctaaaaatgactagttgcttaagagagtcagggaggctgtcttctggtaatgactctagctttttacatcgaaacaat |
306 |
Q |
| |
|
||||||| |||||||||| || | ||||| |||| | |||||||||||| |||||||||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
10035107 |
cctttcttctaacaatgggcaattccaaatgcagagttccctaagagagtcagtgaggctgtcttctggtaatgactcaagctttttacaatcccacaat |
10035008 |
T |
|
| Q |
307 |
tgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaa |
406 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
10035007 |
ctaagtgatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattccaaaaacagagagtttggagagaggagaggtgtcgaa |
10034908 |
T |
|
| Q |
407 |
gcccatttccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaaggtgttaact |
504 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10034907 |
gcccatttccatcaaaggacttcatttcatcgaaatccctgatatatagatacacaagggagatgggtagcaatgactccttcatcaaggtgttaact |
10034810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 7 - 502
Target Start/End: Complemental strand, 9980765 - 9980275
Alignment:
| Q |
7 |
gtagcataggacccatgagatgatatgaaaatattaagaggtgtgtcgtacagatgattgattattggcagttttctggtaggaactgtggaacatacct |
106 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
9980765 |
gtagcagaggacccatgagatgatatgaaaatattaagaggtgtgtcgtacagatgattgattattggc---tttctggtaggaactgtggaacatacct |
9980669 |
T |
|
| Q |
107 |
gaaactggaacacaacttgttctcatgatattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttccttccttttata |
206 |
Q |
| |
|
|||| |||||||||||||| || || |||||||||||| || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
9980668 |
gaaatgggaacacaacttgt-ct-atcatattgtgactttgtaatttattgatatgacagggatgtgagcaattttggaccaatgttccttccttttata |
9980571 |
T |
|
| Q |
207 |
cctttctactaacaatggacatctaaaaatgactagttgcttaagagagtcagggaggctgtcttctggtaatgactctagctttttacatcgaaacaat |
306 |
Q |
| |
|
||||||| |||||||||| || | | ||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| | | ||| |
|
|
| T |
9980570 |
cctttcttctaacaatgggcaaccatcgatgtacagttccttaagagattcagggaggctgtcttctggtaatgactctagctttttacaatcataaaat |
9980471 |
T |
|
| Q |
307 |
tgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaa |
406 |
Q |
| |
|
| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||| ||||||||||||||||||||| | |
|
|
| T |
9980470 |
tcaagtgatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgttgacaaaacaaaaaacagagactttggagagaggagaggtgtcgca |
9980371 |
T |
|
| Q |
407 |
gcccatttccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaaggtgttaa |
502 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9980370 |
gcccatttccatcaaaggacttcatttcagagagatcacagatacgtagatgcacaagggagatgggtagcaatgactccttcatcaaggtgttaa |
9980275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 7 - 502
Target Start/End: Complemental strand, 10264000 - 10263510
Alignment:
| Q |
7 |
gtagcataggacccatgagatgatatgaaaatattaagaggtgtgtcgtacagatgattgattattggcagttttctggtaggaactgtggaacatacct |
106 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10264000 |
gtagcagaggacccatgagatgatatgaaaatattaagaggtgtgtcgtacagatgattgattattggc---tttctggtaggaactgtggaacatacct |
10263904 |
T |
|
| Q |
107 |
gaaactggaacacaacttgttctcatgatattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttccttccttttata |
206 |
Q |
| |
|
|||| |||||||||||||| || || ||||||||||||| |||||||| ||||| |||||||||||||||||||||| | ||||||||||||||||| |
|
|
| T |
10263903 |
gaaatgggaacacaacttgt-ct-atcatattgtgacttcatcatttattcttatgaaagggatgtgagcaattttggactaatgttccttccttttata |
10263806 |
T |
|
| Q |
207 |
cctttctactaacaatggacatctaaaaatgactagttgcttaagagagtcagggaggctgtcttctggtaatgactctagctttttacatcgaaacaat |
306 |
Q |
| |
|
||||||| |||||||||| || || | ||| | ||||||||| ||||||||||||||||||||||||||||||||||| ||||| || |||| |
|
|
| T |
10263805 |
cctttcttctaacaatgggcaaaactcgatagcgagtagtttaagagaggaagggaggctgtcttctggtaatgactctagcttttcacatccaagcaat |
10263706 |
T |
|
| Q |
307 |
tgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaa |
406 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
10263705 |
agaagtgatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaaaagaaaaaacagagatattggagagaggagaggtgttgaa |
10263606 |
T |
|
| Q |
407 |
gcccatttccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaaggtgttaa |
502 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| || | ||| ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10263605 |
gcccatttccatcaaaggacttcatttcagagagatcaaagacacgtagatacaaaagggagatgggtagcaatgactccttcatcaaggtgttaa |
10263510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 7 - 504
Target Start/End: Complemental strand, 10130214 - 10129729
Alignment:
| Q |
7 |
gtagcataggacccatgagatgatatgaaaatattaagaggtgtgtcgtacagatgattgattattggcagttttctggtaggaactgtggaacatacct |
106 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||| ||||||| |
|
|
| T |
10130214 |
gtagcagaggacccatgagatgatatgaaaatattaagaggtgtgtcgtacagaggattgattattggc---tttctggtaggaacta-ggagcatacct |
10130119 |
T |
|
| Q |
107 |
gaaactggaacacaacttgttctcatgatattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttccttccttttata |
206 |
Q |
| |
|
|||| |||||||||||||| || || |||||||| ||| | |||| | ||| ||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
10130118 |
gaaatgggaacacaacttgt-ct-atcatattgtgcctttg------atatttttgaaagggatgtgagcaattttggagcaatgttccttccttttata |
10130027 |
T |
|
| Q |
207 |
cctttctactaacaatggacatctaaaaatgactagttgcttaagagagtcagggaggctgtcttctggtaatgactctagctttttaca-tcgaaacaa |
305 |
Q |
| |
|
||||||| ||||||||||||||| |||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||| || || || |
|
|
| T |
10130026 |
cctttcttctaacaatggacatccttgaatgcacagttgcataagagaatcagggaggctgtcttctggtaatgactctagcttttcacaatcccaa-aa |
10129928 |
T |
|
| Q |
306 |
ttgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcga |
405 |
Q |
| |
|
| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||||||| |
|
|
| T |
10129927 |
gtcaagtgatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatgacaattccaaaagaagagatgttggagagagaagaggtgtcga |
10129828 |
T |
|
| Q |
406 |
agcccatttccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaaggtgttaact |
504 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10129827 |
agcccatttccatcaaaggacttcatttcatcgaaatccctgatatatagatacacaagggagatgggtagcaatgactccttcatcaaggtgttaact |
10129729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 55 - 502
Target Start/End: Complemental strand, 9842109 - 9841667
Alignment:
| Q |
55 |
tacagatgattgattattggcagttttctggtaggaactgtggaacatacctgaaactggaacacaacttgttctcatgatattgtgacttcgtcattta |
154 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| || || ||||| |||||| || |||| |
|
|
| T |
9842109 |
tacagaggattgattattggc---tttctggtaggaactgtggaacatacctgaaacgggaacacaacttgt-ct-atcatattctgacttggtggttta |
9842015 |
T |
|
| Q |
155 |
tatatatgacagggatgtgagcaattttggaccactgttccttccttttatacctttctactaacaatggacatctaaaaatgactagttgcttaagaga |
254 |
Q |
| |
|
| |||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||| ||||| || ||| |||||| |
|
|
| T |
9842014 |
tccatatgacagggatgtgagcaattttggagcaatgttccttccttttatacctttcttctaacaatggacatccccaaatgttcagacgctcaagaga |
9841915 |
T |
|
| Q |
255 |
gtcagggaggctgtcttctggtaatgactctagctttttacatcgaaacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctca |
354 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| |||| |||||||| |||| |||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
9841914 |
gtcagggaggctgtcttctggtaatgactcaagcttttcacattgaaacaatataagtgatttcagcgaggaagggaggcagttttctggcaatgactca |
9841815 |
T |
|
| Q |
355 |
agtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaagcccatttccatcaaaggacttcatttcattgagatcattgatatcca |
454 |
Q |
| |
|
|| | ||||| | |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| | |
|
|
| T |
9841814 |
agctgtggacaaaacgaaaaatcgagatattggagagaggagaggtgtcgaagcccatttccatcaaaggacttcatttcagagagatccctgatattta |
9841715 |
T |
|
| Q |
455 |
gagacacaagggagatgggtagcaatgactccttcatcaaggtgttaa |
502 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
9841714 |
gagacacaagggagatgggtagcaacgactccttcatcaaggtgttaa |
9841667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 98 - 502
Target Start/End: Original strand, 10430898 - 10431301
Alignment:
| Q |
98 |
aacatacctgaaa-ctggaacacaacttgttctcatgatattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttcct |
196 |
Q |
| |
|
||||||||||||| |||||||||||||||| || || ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10430898 |
aacatacctgaaaactggaacacaacttgt-ct-atcatattgtgacttcatcatttatatctatgacagggatgtgagcaattttggaccaatgttcct |
10430995 |
T |
|
| Q |
197 |
tccttttatacctttctactaacaatggacatctaaaaatgactagttgcttaagagagtcagggaggctgtcttctggtaatgactctagctttttaca |
296 |
Q |
| |
|
||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
10430996 |
tccttttatacctttcttctaacaatggacattccctaattctcagttgcttaagagagtcagggaggctgtcttctggtaatgactcaagcttttcaca |
10431095 |
T |
|
| Q |
297 |
tcgaaacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggag |
396 |
Q |
| |
|
| |||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| || |||| || |||||||||| ||||||||||||| |
|
|
| T |
10431096 |
tttccacaaatcaagtgatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgatcacaaaaccaaaaacagagagtttggagagaggag |
10431195 |
T |
|
| Q |
397 |
aggtgtcgaagcccatttccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaagg |
496 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10431196 |
aggtgtcgcagcccatttccatcaaaggacttcatttcagagagatcagtgatatatagatacacaagggagatgggtagcaacgactccttcatcaagg |
10431295 |
T |
|
| Q |
497 |
tgttaa |
502 |
Q |
| |
|
|||||| |
|
|
| T |
10431296 |
tgttaa |
10431301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 55 - 502
Target Start/End: Complemental strand, 10520736 - 10520294
Alignment:
| Q |
55 |
tacagatgattgattattggcagttttctggtaggaactgtggaacatacctgaaactggaacacaacttgttctcatgatattgtgacttcgtcattta |
154 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || || |||||||||||| || ||||| |
|
|
| T |
10520736 |
tacagaggattgattattggc---tttctggtaggaactgtggaacatacctgaaatgggaacacaacttgt-ct-atcatattgtgacttggtaattta |
10520642 |
T |
|
| Q |
155 |
tatatatgacagggatgtgagcaattttggaccactgttccttccttttatacctttctactaacaatggacatctaaaaatgactagttgcttaagaga |
254 |
Q |
| |
|
| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||| ||| ||| ||||| |
|
|
| T |
10520641 |
ttgatatgactgggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatggacattcccaaatgagcagtctcttcagaga |
10520542 |
T |
|
| Q |
255 |
gtcagggaggctgtcttctggtaatgactctagctttttacatcgaaacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctca |
354 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||| |||| |||| | |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10520541 |
gtcagggaggctgtcttctggtaatgatttaagcttttcacatttccacaaatcaagtaatttcagcgaggaagggaggcagttttctggcaatgtctca |
10520442 |
T |
|
| Q |
355 |
agtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaagcccatttccatcaaaggacttcatttcattgagatcattgatatcca |
454 |
Q |
| |
|
|||| | ||||| || ||||| |||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||| ||||| | |
|
|
| T |
10520441 |
agttgttcacaatcccaaaaacggagacgttggagagaggagaggtgacgaagcccttttccatcaaaggacttcatttcagagagatccctgatagtta |
10520342 |
T |
|
| Q |
455 |
gagacacaagggagatgggtagcaatgactccttcatcaaggtgttaa |
502 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10520341 |
gagtcacaagggagatgggtagcaatgactccttcatcaaggtgttaa |
10520294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 98 - 504
Target Start/End: Original strand, 10360658 - 10361063
Alignment:
| Q |
98 |
aacatacctgaaa-ctggaacacaacttgttctcatgatattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttcct |
196 |
Q |
| |
|
||||||||||||| | |||||||||||||| || || |||||||||||| ||| ||||| | |||||| |||||||||||||||||||| || ||||||| |
|
|
| T |
10360658 |
aacatacctgaaaacgggaacacaacttgt-ct-atcatattgtgacttggtcgtttatttttatgacggggatgtgagcaattttggagcaatgttcct |
10360755 |
T |
|
| Q |
197 |
tccttttatacctttctactaacaatggacatctaaaaatgactagttgcttaagagagtcagggaggctgtcttctggtaatgactctagctttttaca |
296 |
Q |
| |
|
||||||||||||||||| |||||||||| || | | ||| | |||| |||||||||||||||||||||||||||||||||||| | ||||||| ||| |
|
|
| T |
10360756 |
tccttttatacctttcttctaacaatgggcaatcatagatgtccagttccttaagagagtcagggaggctgtcttctggtaatgatttaagcttttcaca |
10360855 |
T |
|
| Q |
297 |
tcgaaacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagtttatgacaattcctaaaaca-gagatgttggagagagga |
395 |
Q |
| |
|
| | | ||| |||| ||||||||||||||||||||||||||||||| |||| |||||| | |||| ||| |||| | |||||||||||||||||| |
|
|
| T |
10360856 |
accataaaatgtaagtgatttcagcgaggaagggaggcagttttctggtaatgactcaagctgtcgaca-ttcaaaaaatacgagatgttggagagagga |
10360954 |
T |
|
| Q |
396 |
gaggtgtcgaagcccatttccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaag |
495 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| || ||| ||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10360955 |
gaggtgtcgaagcccatttccatcaaaggacttcatttcagagagatgatggatttccagagacacaagggagacgggtagcaatgactccttcatcaag |
10361054 |
T |
|
| Q |
496 |
gtgttaact |
504 |
Q |
| |
|
||||||||| |
|
|
| T |
10361055 |
gtgttaact |
10361063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 113 - 498
Target Start/End: Complemental strand, 11772429 - 11772047
Alignment:
| Q |
113 |
ggaacacaacttgttctcatgatattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttccttccttttatacctttc |
212 |
Q |
| |
|
|||||||| ||||||||||| |||||||||| |||||||||| |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
11772429 |
ggaacacagcttgttctcat---attgtgactttttcatttatatctatgacagggatgtgagcgattttggaccaatgttctttccttttatacctttc |
11772333 |
T |
|
| Q |
213 |
tactaacaatggacatctaaaaatgactagttgcttaagagagtcagggaggctgtcttctggtaatgactctagctttttacatcgaaacaattgaagt |
312 |
Q |
| |
|
| |||||||||| |||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||| |||| | ||| ||| |||| |
|
|
| T |
11772332 |
ttctaacaatgggcatccccaaatggtcagttgcttaagagagtcggggaggctgtcttccggtaatgactcaagctcctcacacatttgaaatgaaagt |
11772233 |
T |
|
| Q |
313 |
aatttcagcgaggaagggaggcagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaagcccat |
412 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| ||| || | |||||||||| |||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
11772232 |
gatttcaacgaggaagggaggcagttttctggcaatgactcgagctgttgacaattccaaaaatagagatattggagagaggagaggtgtcgaagcccat |
11772133 |
T |
|
| Q |
413 |
ttccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaaggtg |
498 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||| ||||| ||| |||||||||||| || ||||| |||| |||||||||||| |
|
|
| T |
11772132 |
ttccatcaaaagacttcatttcatagagatcaatgatagacaggtccacaagggagataggcagcaacaactctttcatcaaggtg |
11772047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 113 - 498
Target Start/End: Original strand, 11778856 - 11779238
Alignment:
| Q |
113 |
ggaacacaacttgttctcatgatattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttccttccttttatacctttc |
212 |
Q |
| |
|
|||||||| ||||||||||| |||||||||| |||||||| | |||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
11778856 |
ggaacacagcttgttctcat---attgtgactttttcatttatttctatgacagggatgtgagcgattttggaccaatgttctttccttttatacctttc |
11778952 |
T |
|
| Q |
213 |
tactaacaatggacatctaaaaatgactagttgcttaagagagtcagggaggctgtcttctggtaatgactctagctttttacatcgaaacaattgaagt |
312 |
Q |
| |
|
| |||||||||| |||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||| |||| | ||| ||| |||| |
|
|
| T |
11778953 |
ttctaacaatgggcatccccaaatggtcagttgcttaagagagtcggggaggctgtcttccggtaatgactcaagctcctcacacatttgaaatgaaagt |
11779052 |
T |
|
| Q |
313 |
aatttcagcgaggaagggaggcagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaagcccat |
412 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| ||| || | |||||||||| |||| |||||| || |||||||||||||||||||||||||| |
|
|
| T |
11779053 |
gatttcaacgaggaagggaggcagttttctggcaatgactcgagctgttgacaattccaaaaatagagatattcgagagaggagaggtgtcgaagcccat |
11779152 |
T |
|
| Q |
413 |
ttccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaaggtg |
498 |
Q |
| |
|
||||||| |||||||||||||||| ||||||| ||||| ||| |||||||||||| |||||||| | ||||||||||||||| |
|
|
| T |
11779153 |
ttccatcgaaggacttcatttcatagagatcaatgatagacaggtccacaagggagataggtagcaacaaatccttcatcaaggtg |
11779238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 55 - 356
Target Start/End: Complemental strand, 9853128 - 9852832
Alignment:
| Q |
55 |
tacagatgattgattattggcagttttctggtaggaactgtggaacatacctgaaactggaacacaacttgttctcatgatattgtgacttcgtcattta |
154 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||| || | |||||||| |
|
|
| T |
9853128 |
tacagaggattgattattggc---tttctggtaggaactgtggaacatacctgaaatgggaacacaacttgt-ct-atcatattgtaacctggtcattta |
9853034 |
T |
|
| Q |
155 |
tatatatgacagggatgtgagcaattttggaccactgttccttccttttatacctttctactaacaatggacatctaaaaatgactagttgcttaagaga |
254 |
Q |
| |
|
| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| | ||||| | ||| ||| || || |
|
|
| T |
9853033 |
tttctatgacagggatgtgagcaattttggaccaatgttccttccttttatacctttcttctaacaatggacatccataaatgtccagtctcttcagtga |
9852934 |
T |
|
| Q |
255 |
gtcagggaggctgtcttctggtaatgactctagctttttacatcgaaacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctca |
354 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||| || ||||||||||||||||| |||| |||| |
|
|
| T |
9852933 |
gtcagggaggctgtcttctggtaatgactctagcttttcacatttccacaattcaagtgatttcagcgatgatgggaggcagttttctggtaatgactca |
9852834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 258 - 502
Target Start/End: Complemental strand, 10583566 - 10583322
Alignment:
| Q |
258 |
agggaggctgtcttctggtaatgactctagctttttaca-tcgaaacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaag |
356 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||| ||| || | | ||| |||| ||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10583566 |
agggaggctgtcttctggtaatgacccaagcttttcacaatccata-aatgaaagtgatttcagtgaggaagggaggcagttttctggcaatgtctcaag |
10583468 |
T |
|
| Q |
357 |
tttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaagcccatttccatcaaaggacttcatttcattgagatcattgatatccaga |
456 |
Q |
| |
|
|| ||||||| | ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||| ||| |
|
|
| T |
10583467 |
ttgatgacaaatgaaaaaacagagatattggagagaggagaggtgtcgcagcccatttccatcaaaggacttcatttcagagagattccagatatataga |
10583368 |
T |
|
| Q |
457 |
gacacaagggagatgggtagcaatgactccttcatcaaggtgttaa |
502 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
10583367 |
tacacaagggagatgggtagcaacgactccttcatcaaggtgttaa |
10583322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 102 - 349
Target Start/End: Complemental strand, 10666742 - 10666497
Alignment:
| Q |
102 |
tacctgaaactggaacacaacttgttctcatgatattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttccttcctt |
201 |
Q |
| |
|
|||||||||| ||||||||||| || || || |||||||||||| || |||||| ||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
10666742 |
tacctgaaacaggaacacaactcgt-ct-atcatattgtgactttgtaatttattgatatgacagggatgtgagcaattttggaccaatgttccttcctt |
10666645 |
T |
|
| Q |
202 |
ttatacctttctactaacaatggacatctaaaaatgactagttgcttaagagagtcagggaggctgtcttctggtaatgactctagctttttacatcgaa |
301 |
Q |
| |
|
|||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||| || |
|
|
| T |
10666644 |
ttatacctttcttctaacaatggacattcctcaatgtgcagttccttaagagagtcagggaggctgtcttctggtaatgactcaagcttttcacattcaa |
10666545 |
T |
|
| Q |
302 |
acaattgaagtaatttcagcgaggaagggaggcagttttctggcaatg |
349 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||| || |||||| |||| |
|
|
| T |
10666544 |
acaattcaagtgatttcagcgaggaagggaggctgtcttctggtaatg |
10666497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 63 - 349
Target Start/End: Complemental strand, 10583829 - 10583544
Alignment:
| Q |
63 |
attgattattggcagttttctggtaggaactgtggaacatacctgaaa-ctggaacacaacttgttctcatgatattgtgacttcgtcatttatatatat |
161 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| || || |||||||||||| || |||||| | ||| |
|
|
| T |
10583829 |
attgattattggcagttttctggtaggaaatgtggaacatacctgaaaacgggaacacaacttgt-ct-atcatattgtgactttgtgatttatttgtat |
10583732 |
T |
|
| Q |
162 |
gacagggatgtgagcaattttggaccactgttccttccttttatacctttctactaacaatggacatctaaaaatgactagttgcttaagagagtcaggg |
261 |
Q |
| |
|
||||||||||||||||||||||||||| | ||| |||||||||||||||||| |||||||||| || ||| ||| ||| ||||||||||||| |
|
|
| T |
10583731 |
gacagggatgtgagcaattttggaccaatattcattccttttatacctttcttctaacaatgggcaaaattggatggtcagtcgctcaagagagtcaggg |
10583632 |
T |
|
| Q |
262 |
aggctgtcttctggtaatgactctagctttttacatcgaaacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatg |
349 |
Q |
| |
|
||||||||||||||||||||||| || || ||| | | ||||||||| ||||||||||||||||||||| || |||||| |||| |
|
|
| T |
10583631 |
aggctgtcttctggtaatgactcgagtcttacacaacccacaaattgaagtgatttcagcgaggaagggaggctgtcttctggtaatg |
10583544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 304 - 502
Target Start/End: Complemental strand, 9852746 - 9852548
Alignment:
| Q |
304 |
aattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggagaggtgtc |
403 |
Q |
| |
|
|||| |||| ||||||| |||||||||| ||||||||||||||||| | |||| | |||||| | |||| |||||| |||||||||| ||||||||| |
|
|
| T |
9852746 |
aatttaagtgatttcagtgaggaagggaagcagttttctggcaatgacccaagctgttgacaacccgcaaaatagagatattggagagagaagaggtgtc |
9852647 |
T |
|
| Q |
404 |
gaagcccatttccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaaggtgttaa |
502 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9852646 |
gaagcccatttccatcaaaggacttcatttcagagagaaccatgatatttagagacacaagggagatgggtagcaatgactccttcatcaaggtgttaa |
9852548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 309 - 502
Target Start/End: Complemental strand, 10503584 - 10503391
Alignment:
| Q |
309 |
aagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaagc |
408 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||| ||| |||| || ||||||||||| ||||||||| |
|
|
| T |
10503584 |
aagtaatttcagcgaggaagggaggcagttttctggcaatgactcaagctgtagacaattaagaaattcaagattttcgagagaggagatttgtcgaagc |
10503485 |
T |
|
| Q |
409 |
ccatttccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaaggtgttaa |
502 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| |||||| ||||| ||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
10503484 |
ccatttccatcaaaggacttcatttcatagagatcactgatatatagagatgcaagggagatgggaagcaacgactccttcatcaaggtgttaa |
10503391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 316 - 504
Target Start/End: Original strand, 10372916 - 10373104
Alignment:
| Q |
316 |
ttcagcgaggaagggaggcagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaagcccatttc |
415 |
Q |
| |
|
||||| ||||||||||||| || |||||| |||| |||||| || | |||||| |||| |||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
10372916 |
ttcagagaggaagggaggctgtcttctggtaatgactcaagcttttcacaattaaaaaaatagagatttttgagagaggagaggtgtcgaagcccatttc |
10373015 |
T |
|
| Q |
416 |
catcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaaggtgttaact |
504 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
10373016 |
catcaaaggacttcatttcagagagataattgatacgtagatgcacaagggagatgggtagcaacgactccttcatcaaggtgttaact |
10373104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 98 - 292
Target Start/End: Original strand, 10372768 - 10372961
Alignment:
| Q |
98 |
aacatacctgaaa-ctggaacacaacttgttctcatgatattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttcct |
196 |
Q |
| |
|
||||||||||||| | |||||||||||||| || || ||||||||| || ||| ||||| | |||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
10372768 |
aacatacctgaaaacgggaacacaacttgt-ct-atcatattgtgatttggtcgtttatttttatgacggggatgtgagcaattttggaccaatgttcct |
10372865 |
T |
|
| Q |
197 |
tccttttatacctttctactaacaatggacatctaaaaatgactagttgcttaagagagtcagggaggctgtcttctggtaatgactctagctttt |
292 |
Q |
| |
|
||||||||||||||||| |||||||||| |||| | |||||| ||| ||| |||||| ||||||||||||||||||||||||||| ||||||| |
|
|
| T |
10372866 |
tccttttatacctttcttctaacaatgggcatcccataatgaccagtctcttcagagaggaagggaggctgtcttctggtaatgactcaagctttt |
10372961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 134 - 504
Target Start/End: Complemental strand, 10193272 - 10192903
Alignment:
| Q |
134 |
atattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttccttccttttatacctttctactaacaatggacatctaaa |
233 |
Q |
| |
|
||||||||| |||| ||||||| | ||||||||| ||| ||| |||||||||||| |||||||||||||||||||||||| |||||| || | | |
|
|
| T |
10193272 |
atattgtgatttcgccatttatttttatgacaggaatgagagaaattttggaccaatgttccttccttttatacctttcttttaacaaagggaaaaatac |
10193173 |
T |
|
| Q |
234 |
aatgactagttgcttaagagagtcagggaggctgtcttctggtaatgactctagctttttacatcgaaacaattgaagtaatttcagcgaggaagggagg |
333 |
Q |
| |
|
||| ||| |||| ||||| |||||||||| |||||| |||||||| || || ||| ||| | | | || |||| |||||||||||||||| | | |
|
|
| T |
10193172 |
gatgcttagacgcttcagagaatcagggaggcagtcttccggtaatgattcaagtctttcacaactccaaatttcaagtgatttcagcgaggaaggaacg |
10193073 |
T |
|
| Q |
334 |
cagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaagcccatttccatcaaaggacttcattt |
433 |
Q |
| |
|
|| ||||| || |||| |||||||| |||||||| | ||| |||| || |||| ||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
10193072 |
caattttcaggaaatggctcaagttgttgacaattacgaaagtgaagat-ttcgagaaaggagaggtgttgaagcccatttccatcaaaggacttcatgt |
10192974 |
T |
|
| Q |
434 |
cattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaaggtgttaact |
504 |
Q |
| |
|
|| ||||||| |||| ||||||||||||||||||||||||||| | ||| || | ||||||||||||| |
|
|
| T |
10192973 |
tatagagatcaccaatattcagagacacaagggagatgggtagcaacggctcttttaccaaggtgttaact |
10192903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 100 - 504
Target Start/End: Complemental strand, 10531989 - 10531588
Alignment:
| Q |
100 |
catacctgaaactggaacacaacttgttctcatgatattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttccttcc |
199 |
Q |
| |
|
|||||||||||| |||||||||||||| |||| ||||| |||| | ||||| ||||||||||||||||| |||||||||||| | |||||||| |
|
|
| T |
10531989 |
catacctgaaacgggaacacaacttgtcttcat---attgtaacttgcttgtttattattatgacagggatgtgagaaattttggaccaattttccttcc |
10531893 |
T |
|
| Q |
200 |
ttttatacctttctactaacaatgg--acatct-aaaaatgactagttgcttaagagagtcagggaggctgtcttctggtaatgactctagctttttaca |
296 |
Q |
| |
|
|||||||||||||| |||||||||| | | || | | ||| |||| ||||||||| ||||||||||||||||||||||||||| || || ||| |
|
|
| T |
10531892 |
ttttatacctttcttctaacaatgggcaaaactcgatagtgagtagt---ttaagagaggaagggaggctgtcttctggtaatgactcaagtcttacaca |
10531796 |
T |
|
| Q |
297 |
tcgaaacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggag |
396 |
Q |
| |
|
| | ||||||||| | |||||||||||||||||||| ||||||||||||| |||||| | ||||| ||| |||| || |||||||||| |
|
|
| T |
10531795 |
actcgaaaattgaagtgacttcagcgaggaagggaggcaattttctggcaatgactcaagctccaagcaattaagaaagtgaagatttttgagagaggag |
10531696 |
T |
|
| Q |
397 |
aggtgtcgaagcccatttccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaagg |
496 |
Q |
| |
|
||||||||||| |||||||| ||||| ||||| |||||| ||||| | ||| |||||||||||||||||||| ||||||||||| |||| || || |
|
|
| T |
10531695 |
aggtgtcgaagtccatttccttcaaatgactttatttcagagagatgaccaatagatagagacacaagggagatgggaagcaatgactcgttcagcacgg |
10531596 |
T |
|
| Q |
497 |
tgttaact |
504 |
Q |
| |
|
|||||||| |
|
|
| T |
10531595 |
tgttaact |
10531588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 134 - 504
Target Start/End: Complemental strand, 10086352 - 10085983
Alignment:
| Q |
134 |
atattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttccttccttttatacctttctactaacaatggacatctaaa |
233 |
Q |
| |
|
||||||||| |||| ||||||| | ||||||||| ||| ||| |||||||||||| |||||||||||||||||||||||| |||||| || | | |
|
|
| T |
10086352 |
atattgtgatttcgccatttatttttatgacaggaatgagagaaattttggaccaatgttccttccttttatacctttcttttaacaaagggaaaaatac |
10086253 |
T |
|
| Q |
234 |
aatgactagttgcttaagagagtcagggaggctgtcttctggtaatgactctagctttttacatcgaaacaattgaagtaatttcagcgaggaagggagg |
333 |
Q |
| |
|
||| || |||| ||||| |||||||||| |||||| |||||||| || || ||| ||| | | | || |||| |||||||||||||||| | | |
|
|
| T |
10086252 |
gatgctcagacgcttcagagaatcagggaggcagtcttccggtaatgattcaagtctttcacaactccaaatttcaagtgatttcagcgaggaaggaacg |
10086153 |
T |
|
| Q |
334 |
cagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaagcccatttccatcaaaggacttcattt |
433 |
Q |
| |
|
|| ||||| || |||| |||||||| |||||||| | ||| |||| || |||| ||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
10086152 |
caattttcaggaaatggctcaagttgttgacaattacgaaagtgaagat-ttcgagaaaggagaggtgttgaagcccatttccatcaaaggacttcatgt |
10086054 |
T |
|
| Q |
434 |
cattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaaggtgttaact |
504 |
Q |
| |
|
|| ||||||| |||| |||||||||||||||||||| |||||| | ||| || | ||||||||||||| |
|
|
| T |
10086053 |
tatagagatcaccaatattcagagacacaagggagatggttagcaacggctcttttaccaaggtgttaact |
10085983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 315 - 504
Target Start/End: Complemental strand, 10091784 - 10091604
Alignment:
| Q |
315 |
tttcagcgaggaagggaggcagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaagcccattt |
414 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||| | |||| | | ||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10091784 |
tttcagcgaggaagggaggcagttttctggcaatgactgaagctgtcgacattgacagaaatcgagacgttggagagaggagaggtgtcgaagcccattt |
10091685 |
T |
|
| Q |
415 |
ccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaaggtgttaact |
504 |
Q |
| |
|
||||||||||||||||| | || ||| |||||||||||||||||||||||||||||| |||||| ||| |||| |||||||| |
|
|
| T |
10091684 |
ccatcaaaggacttcatcttatagag---------atccagagacacaagggagatgggtagcaacgactccgtcaccaagttgttaact |
10091604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 315 - 504
Target Start/End: Complemental strand, 10198666 - 10198486
Alignment:
| Q |
315 |
tttcagcgaggaagggaggcagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaagcccattt |
414 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || ||| | |||| | | ||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
10198666 |
tttcagcgaggaagggaggcagttttctggcaatgactgaagctgtcgacattgacagaaatcgagacgttggagagaggagaggtgtcgaagcccattt |
10198567 |
T |
|
| Q |
415 |
ccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaaggtgttaact |
504 |
Q |
| |
|
||||||||||||||||| | || ||| |||||||||||||||||||||||||||||| |||||| ||| |||| |||||||| |
|
|
| T |
10198566 |
ccatcaaaggacttcatcttatagag---------atccagagacacaagggagatgggtagcaacgactccgtcaccaagttgttaact |
10198486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 159 - 504
Target Start/End: Complemental strand, 10680731 - 10680386
Alignment:
| Q |
159 |
tatgacagggatgtgagcaattttggaccactgttccttccttttatacctttctactaacaatggacatctaaaaatga---ctagttgcttaagagag |
255 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||||||||| || ||| ||| ||| | ||||||||| |
|
|
| T |
10680731 |
tatgacagggatgtgagaaattttggaccgatgttcattccttttatacctttcttctaacaatgggca---aaacttgatagtgagtagtttaagagag |
10680635 |
T |
|
| Q |
256 |
tcagggaggctgtcttctggtaatgactctagctttttacatcgaaacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaa |
355 |
Q |
| |
|
||||||||||||||||||||| |||| || || ||| | || ||||||||| |||||||||||||||||||||| |||||||| |||| ||||| |
|
|
| T |
10680634 |
gaagggaggctgtcttctggtaacaactcaagtcttacacaactcaaaaattgaagtgatttcagcgaggaagggaggcaattttctggaaatgactcaa |
10680535 |
T |
|
| Q |
356 |
gtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaagcccatttccatcaaaggacttcatttcattgagatcattgatatccag |
455 |
Q |
| |
|
| | ||||| ||| |||| || ||||||||||||||||||||| |||||||| |||| ||||| |||||| ||||| | ||| || |
|
|
| T |
10680534 |
gctccgagcaattaagaaagttaagatttttgagagaggagaggtgtcgaagtccatttccttcaagtgactttatttcagagagatgaccaatagatag |
10680435 |
T |
|
| Q |
456 |
agacacaagggagatgggtagcaatgactccttcatcaaggtgttaact |
504 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||| || |||||||||| |
|
|
| T |
10680434 |
agacacaagggagatgggaagcaatgactcgttcagcacggtgttaact |
10680386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 160 - 369
Target Start/End: Complemental strand, 10092146 - 10091937
Alignment:
| Q |
160 |
atgacagggatgtgagcaattttggaccactgttccttccttttatacctttctactaacaatggacatctaaaaatgactagttgcttaagagagtcag |
259 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||| |||| | |||| || ||||||| || |
|
|
| T |
10092146 |
atgacagggatgtgagaaattttggaccaatgttccttccttttatacctttcttctaacaatgggcatcccataatgtacagagtgataagagatgaag |
10092047 |
T |
|
| Q |
260 |
ggaggctgtcttctggtaatgactctagctttttacatcgaaacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttt |
359 |
Q |
| |
|
|||||||||||||||||||||| || ||| ||||||| | |||| |||| ||||||||||||| ||||||||||| ||||| |||| |||||| || |
|
|
| T |
10092046 |
ggaggctgtcttctggtaatgaatcaagcattttacaatcactcaatctaagtgatttcagcgaggacgggaggcagttgtctggaaatgactcaagctt |
10091947 |
T |
|
| Q |
360 |
atgacaattc |
369 |
Q |
| |
|
| ||||||| |
|
|
| T |
10091946 |
ttcacaattc |
10091937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 160 - 369
Target Start/End: Complemental strand, 10199028 - 10198819
Alignment:
| Q |
160 |
atgacagggatgtgagcaattttggaccactgttccttccttttatacctttctactaacaatggacatctaaaaatgactagttgcttaagagagtcag |
259 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||| |||| | |||| || ||||||| || |
|
|
| T |
10199028 |
atgacagggatgtgagaaattttggaccaatgttccttccttttatacctttcttctaacaatgggcatcccataatgtacagagtgataagagatgaag |
10198929 |
T |
|
| Q |
260 |
ggaggctgtcttctggtaatgactctagctttttacatcgaaacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagttt |
359 |
Q |
| |
|
|||||||||||||||||||||| || ||| ||||||| | |||| |||| ||||||||||||| ||||||||||| ||||| |||| |||||| || |
|
|
| T |
10198928 |
ggaggctgtcttctggtaatgaatcaagcattttacaatcactcaatctaagtgatttcagcgaggacgggaggcagttgtctggaaatgactcaagctt |
10198829 |
T |
|
| Q |
360 |
atgacaattc |
369 |
Q |
| |
|
| ||||||| |
|
|
| T |
10198828 |
ttcacaattc |
10198819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 102 - 281
Target Start/End: Complemental strand, 10503857 - 10503681
Alignment:
| Q |
102 |
tacctgaaactggaacacaacttgttctcatgatattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttccttcctt |
201 |
Q |
| |
|
|||||||||| |||||||| | ||| ||||| |||||||||| ||| ||| | ||||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
10503857 |
tacctgaaacgggaacacagcctgtcctcat---attgtgacttgtccatctatttctatgacagggatgtgagaaattttggaccaatgttccttcctt |
10503761 |
T |
|
| Q |
202 |
ttatacctttctactaacaatggacatctaaaaatgactagttgcttaagagagtcagggaggctgtcttctggtaatga |
281 |
Q |
| |
|
|||||||||||| |||| ||| ||||| ||||| ||| |||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
10503760 |
ttatacctttcttctaatgttgggcatctttgaatgatcagtagcttaagagaatcaggaaggctgtcttctggtaatga |
10503681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 10430718 - 10430786
Alignment:
| Q |
7 |
gtagcataggacccatgagatgatatgaaaatattaagaggtgtgtcgtacagatgattgattattggc |
75 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10430718 |
gtagcagaggacccatgagatgatatgaaaatattaagaggtgtgtcgtacagatgattgattattggc |
10430786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 362 - 498
Target Start/End: Original strand, 13852563 - 13852699
Alignment:
| Q |
362 |
gacaattcctaaaacagagatgttggagagaggagaggtgtcgaagcccatttccatcaaaggacttcatttcattgagatcattgatatccagagacac |
461 |
Q |
| |
|
||||||||| ||| | ||||| | |||||||||||| |||||||||||||||||||| || |||||||||||| |||| |||| |||||||| |
|
|
| T |
13852563 |
gacaattccaaaatccgagattgttgagagaggagagatgtcgaagcccatttccatcgaaagacttcatttcagagagactgccgataaacagagacaa |
13852662 |
T |
|
| Q |
462 |
aagggagatgggtagcaatgactccttcatcaaggtg |
498 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||| |
|
|
| T |
13852663 |
aagggagatgggtatcaacagctccttcatcaaggtg |
13852699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 387 - 502
Target Start/End: Complemental strand, 10666390 - 10666275
Alignment:
| Q |
387 |
gagagaggagaggtgtcgaagcccatttccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactcc |
486 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| ||||||||||| | |||| | ||| |||||||||||||| ||||||||||| |||||| |
|
|
| T |
10666390 |
gagagaggagaggtgtagaagcccatttccattaaaggacttcaaattgcagagagctctgaacgttagagacacaagggatatgggtagcaacgactcc |
10666291 |
T |
|
| Q |
487 |
ttcatcaaggtgttaa |
502 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
10666290 |
ttcatcaaggtgttaa |
10666275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 8585531 - 8585578
Alignment:
| Q |
149 |
catttatatatatgacagggatgtgagcaattttggaccactgttcct |
196 |
Q |
| |
|
||||||||| ||||||||| ||||||||||| |||||||| ||||||| |
|
|
| T |
8585531 |
catttatatttatgacaggtatgtgagcaatgttggaccaatgttcct |
8585578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 435
Target Start/End: Complemental strand, 10892241 - 10892194
Alignment:
| Q |
388 |
agagaggagaggtgtcgaagcccatttccatcaaaggacttcatttca |
435 |
Q |
| |
|
|||||||||||||||||||||||||||||| | ||| | ||||||||| |
|
|
| T |
10892241 |
agagaggagaggtgtcgaagcccatttccacctaagcatttcatttca |
10892194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 503
Target Start/End: Complemental strand, 13163906 - 13163791
Alignment:
| Q |
388 |
agagaggagaggtgtcgaagcccatttccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactcct |
487 |
Q |
| |
|
|||||||| |||||||| || ||||||||||||||||| || |||||| ||||| | |||| || ||||||||| || || || ||||| ||||| |
|
|
| T |
13163906 |
agagaggataggtgtcggagtccatttccatcaaaggattttatttcacagagattagaaatatacaaagacacaagtgaaattggcagcaaccgctcct |
13163807 |
T |
|
| Q |
488 |
tcatcaaggtgttaac |
503 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
13163806 |
tcagcaaggtgttaac |
13163791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 356
Target Start/End: Complemental strand, 10091850 - 10091812
Alignment:
| Q |
318 |
cagcgaggaagggaggcagttttctggcaatgtctcaag |
356 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
10091850 |
cagcgaggaagggagacagttttctggcaatgactcaag |
10091812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 356
Target Start/End: Complemental strand, 10198732 - 10198694
Alignment:
| Q |
318 |
cagcgaggaagggaggcagttttctggcaatgtctcaag |
356 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
10198732 |
cagcgaggaagggagacagttttctggcaatgactcaag |
10198694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 344
Target Start/End: Complemental strand, 9852860 - 9852775
Alignment:
| Q |
259 |
gggaggctgtcttctggtaatgactctagctttttacatcgaaacaattgaagtaatttcagcgaggaagggaggcagttttctgg |
344 |
Q |
| |
|
||||||| || ||||||||||||||| ||||| ||||| || |||| |||| |||||||||| || |||||||||||| |||| |
|
|
| T |
9852860 |
gggaggcagttttctggtaatgactcaagcttcttacaatcaacaaatttaagtgatttcagcgatgatgggaggcagtttactgg |
9852775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 417
Target Start/End: Original strand, 11128163 - 11128192
Alignment:
| Q |
388 |
agagaggagaggtgtcgaagcccatttcca |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
11128163 |
agagaggagaggtgtcgaagcccatttcca |
11128192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 417
Target Start/End: Original strand, 11157154 - 11157183
Alignment:
| Q |
388 |
agagaggagaggtgtcgaagcccatttcca |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
11157154 |
agagaggagaggtgtcgaagcccatttcca |
11157183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 7 - 502
Target Start/End: Original strand, 54372 - 54862
Alignment:
| Q |
7 |
gtagcataggacccatgagatgatatgaaaatattaagaggtgtgtcgtacagatgattgattattggcagttttctggtaggaactgtggaacatacct |
106 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
54372 |
gtagcagaggacccatgagatgatatgaaaatattaagaggtgtgtcgtacagatgattgattattggc---tttctggtaggaactgtggaacatacct |
54468 |
T |
|
| Q |
107 |
gaaactggaacacaacttgttctcatgatattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttccttccttttata |
206 |
Q |
| |
|
|||| |||||||||||||| || || |||||||||||| || |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
54469 |
gaaatgggaacacaacttgt-ct-atcatattgtgactttgtaatttattgatatgacagggatgtgagcaattttggaccaatgttccttccttttata |
54566 |
T |
|
| Q |
207 |
cctttctactaacaatggacatctaaaaatgactagttgcttaagagagtcagggaggctgtcttctggtaatgactctagctttttacatcgaaacaat |
306 |
Q |
| |
|
||||||| |||||||||| || | | ||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| | | ||| |
|
|
| T |
54567 |
cctttcttctaacaatgggcaaccatcgatgtacagttccttaagagattcagggaggctgtcttctggtaatgactctagctttttacaatcataaaat |
54666 |
T |
|
| Q |
307 |
tgaagtaatttcagcgaggaagggaggcagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaa |
406 |
Q |
| |
|
| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||| ||||||||||||||||||||| | |
|
|
| T |
54667 |
tcaagtgatttcagcgaggaagggaggcagttttctggcaatgtctcaagttgttgacaaaacaaaaaacagagactttggagagaggagaggtgtcgca |
54766 |
T |
|
| Q |
407 |
gcccatttccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaaggtgttaa |
502 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
54767 |
gcccatttccatcaaaggacttcatttcagagagatcacagatacgtagatgcacaagggagatgggtagcaatgactccttcatcaaggtgttaa |
54862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 137; Significance: 3e-71; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 150 - 502
Target Start/End: Complemental strand, 26910049 - 26909697
Alignment:
| Q |
150 |
atttatatatatgacagggatgtgagcaattttggaccactgttccttccttttatacctttctactaacaatggacatctaaaaatgactagttgctta |
249 |
Q |
| |
|
|||||| | |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||| || | || | || || | |
|
|
| T |
26910049 |
atttatttgtatgacagggatgtgagcaattttggaccaatgttccttccttttgtacctttcttctaacaatgggcaagatgacatttccagcatctca |
26909950 |
T |
|
| Q |
250 |
agagagtcagggaggctgtcttctggtaatgactctagctttttacatcgaaacaattgaagtaatttcagcgaggaagggaggcagttttctggcaatg |
349 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| || || | ||| | | | |||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
26909949 |
agagagtcggggaggctgtcttctggtaatgactcaagtttctcacagccataaaattgaagatatttcagcgaggaagggaggcagttttctggaaatg |
26909850 |
T |
|
| Q |
350 |
tctcaagtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaagcccatttccatcaaaggacttcatttcattgagatcattgat |
449 |
Q |
| |
|
|| |||| | |||||| |||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
26909849 |
acttgagttgttcacaattaataaagtgaagattttggagagaggagaggcgtcgaagcccatttccatcaaaggacttcatttcatagagatccatgat |
26909750 |
T |
|
| Q |
450 |
atccagagacacaagggagatgggtagcaatgactccttcatcaaggtgttaa |
502 |
Q |
| |
|
| ||||| |||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
26909749 |
ttgtagagaaacaagggagatgggtagcaacaactccttcatcaaggtgttaa |
26909697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 134 - 500
Target Start/End: Original strand, 17849815 - 17850181
Alignment:
| Q |
134 |
atattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttccttccttttatacctttctactaacaatggacatctaaa |
233 |
Q |
| |
|
|||||||||||| ||| | || | |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||| | || |||| | |
|
|
| T |
17849815 |
atattgtgacttggtcctcaatttctatgacagggatgtgagcaattttggaccaatgttcctgccttttatacctttcttctaatatagggcatcgcca |
17849914 |
T |
|
| Q |
234 |
aatgactagttgcttaagagagtcagggaggctgtcttctggtaatgactctagctttttacatcgaaacaattgaagtaatttcagcgaggaagggagg |
333 |
Q |
| |
|
|||||| ||| ||||||||||| ||||||||||||||||||||| ||||| || ||||||| | | |||| ||| ||||||| |||||||||||| |
|
|
| T |
17849915 |
aatgaccagtcgcttaagagaggaagggaggctgtcttctggtaacgactcaagtcttttacaataacaaaattcaagcgatttcagtgaggaagggagg |
17850014 |
T |
|
| Q |
334 |
cagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggagaggtgtcgaagcccatttccatcaaaggacttcattt |
433 |
Q |
| |
|
||||||| |||||||| |||||||| ||||| || ||| ||| || |||||||| || |||||||| ||||||||||||||||| |||| | |
|
|
| T |
17850015 |
cagttttgtggcaatgactcaagttgttgacagttaagaaagtcaagactttcaagagaggaaagatgtcgaagtccatttccatcaaaggagttcagat |
17850114 |
T |
|
| Q |
434 |
cattgagatcattgatatccagagacacaagggagatgggtagcaatgactccttcatcaaggtgtt |
500 |
Q |
| |
|
|| ||||| | |||| ||||||||| ||||| || || ||||| |||||||||||||||||||| |
|
|
| T |
17850115 |
tatagagatgacagatagtcagagacacgagggatattgggagcaacgactccttcatcaaggtgtt |
17850181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 134 - 478
Target Start/End: Original strand, 44954552 - 44954896
Alignment:
| Q |
134 |
atattgtgacttcgtcatttatatatatgacagggatgtgagcaattttggaccactgttccttccttttatacctttctactaacaatggacatctaaa |
233 |
Q |
| |
|
|||||||||||| | ||| ||| | ||||||| | || | ||||||||||||||| |||||||||||| ||||||||||| || | | || |||| | |
|
|
| T |
44954552 |
atattgtgacttggccatctatttctatgacatgaattttagcaattttggaccaatgttccttccttctatacctttcttctgatacagggcatcgcca |
44954651 |
T |
|
| Q |
234 |
aatgactagttgcttaagagagtcagggaggctgtcttctggtaatgactctagctttttacatcgaaacaattgaagtaatttcagcgaggaagggagg |
333 |
Q |
| |
|
|||||| ||| | |||||||||| |||||||| ||||||||||| ||||| || | || ||| || ||||||||| |||||||||||||||| || |
|
|
| T |
44954652 |
aatgaccagtcgattaagagagttggggaggctttcttctggtaacgactcaag-tcttcacaaaacaaaaattgaagtgatttcagcgaggaaggaaga |
44954750 |
T |
|
| Q |
334 |
cagttttctggcaatgtctcaagtttatgacaattcctaaaacagagatgttggagagaggag-aggtgtcgaagcccatttccatcaaaggacttcatt |
432 |
Q |
| |
|
||||||||||| |||| |||||| | ||||| || | ||| ||||| || |||||||||| |||||| ||||||||||||| | ||||||||||||| |
|
|
| T |
44954751 |
cagttttctggaaatgactcaagctgttgacagttacgaaagtggagattttcgagagaggagtaggtgttgaagcccatttccttgaaaggacttcatt |
44954850 |
T |
|
| Q |
433 |
tcattgagatcattgatatccagagacacaagggagatgggtagca |
478 |
Q |
| |
|
|||| |||| | ||||| |||||||||||||||||||||||||| |
|
|
| T |
44954851 |
tcatccagataactgatagtcagagacacaagggagatgggtagca |
44954896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 387 - 502
Target Start/End: Complemental strand, 11487953 - 11487838
Alignment:
| Q |
387 |
gagagaggagaggtgtcgaagcccatttccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactcc |
486 |
Q |
| |
|
|||||||||||||| |||||||||| |||||||| ||| |||||||| | | || || |||| ||||||||||||||||||||||||||| |||| | |
|
|
| T |
11487953 |
gagagaggagaggtatcgaagcccacttccatcatagggcttcattttgtagcgacaatcgatagtcagagacacaagggagatgggtagcaacgactgc |
11487854 |
T |
|
| Q |
487 |
ttcatcaaggtgttaa |
502 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
11487853 |
ttcatcaaggtgttaa |
11487838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 503
Target Start/End: Original strand, 143082 - 143197
Alignment:
| Q |
388 |
agagaggagaggtgtcgaagcccatttccatcaaaggacttcatttcattgagatcattgatatccagagacacaagggagatgggtagcaatgactcct |
487 |
Q |
| |
|
|||||||| |||||||| || ||||||||||||||||| || |||||| ||||| | |||| || ||||||||| || || || ||||| ||||| |
|
|
| T |
143082 |
agagaggataggtgtcggagtccatttccatcaaaggattttatttcacagagattagaaatatacaaagacacaagtgaaattggcagcaaccgctcct |
143181 |
T |
|
| Q |
488 |
tcatcaaggtgttaac |
503 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
143182 |
tcagcaaggtgttaac |
143197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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