View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17961_high_23 (Length: 263)
Name: NF17961_high_23
Description: NF17961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17961_high_23 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 7 - 249
Target Start/End: Original strand, 11128586 - 11128828
Alignment:
| Q |
7 |
cataggtgaattgttttgttcatcaatgacaaatttacatttcatttgtaaataaataaataatgataaatagatgagatgatagaagaagtgttgctaa |
106 |
Q |
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| T |
11128586 |
catagatgaattgttttgttcatcaatgacaattttacatttcatttgtaaataaataaataatgataaatagatgagatgatagaagaagtgttgctaa |
11128685 |
T |
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| Q |
107 |
gatatttaagggcagctttctgatcttatcgttgttatatagcgcacggttattattttgtgaagctacaaagcaaaagcactcactctgcaatgttttg |
206 |
Q |
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| T |
11128686 |
gatatttaagggcagctttctgatcttatcgttgttatatagcgcacggttattattttgtgaagctacaaagcaaaagcactcactctgcaatgttttg |
11128785 |
T |
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| Q |
207 |
cttatgcaacaatctttctataaacaaacccattgttgttact |
249 |
Q |
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| T |
11128786 |
cttatgcaacaatctttctataaacaaacccattgttgttact |
11128828 |
T |
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