View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17961_low_18 (Length: 322)

Name: NF17961_low_18
Description: NF17961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17961_low_18
NF17961_low_18
[»] chr5 (53 HSPs)
chr5 (9-306)||(38834612-38834892)
chr5 (46-194)||(31588291-31588437)
chr5 (47-204)||(87196-87350)
chr5 (46-205)||(18999574-18999730)
chr5 (84-194)||(3935639-3935750)
chr5 (46-204)||(8648000-8648155)
chr5 (46-205)||(30415418-30415573)
chr5 (85-205)||(18339108-18339229)
chr5 (47-175)||(8750324-8750449)
chr5 (47-194)||(16284275-16284419)
chr5 (46-194)||(31176507-31176652)
chr5 (87-194)||(3406805-3406913)
chr5 (87-205)||(13987319-13987439)
chr5 (46-154)||(18999366-18999470)
chr5 (45-204)||(35373453-35373603)
chr5 (90-203)||(3406499-3406613)
chr5 (39-205)||(15978382-15978544)
chr5 (46-138)||(87019-87107)
chr5 (102-186)||(35383292-35383377)
chr5 (46-130)||(22231170-22231250)
chr5 (46-130)||(119184-119264)
chr5 (87-194)||(1650041-1650152)
chr5 (46-129)||(18340661-18340740)
chr5 (46-130)||(39402212-39402291)
chr5 (39-130)||(3191791-3191877)
chr5 (44-130)||(21949398-21949479)
chr5 (91-130)||(21949841-21949880)
chr5 (46-138)||(4187838-4187926)
chr5 (92-130)||(5747202-5747240)
chr5 (92-130)||(6543456-6543494)
chr5 (46-129)||(8750010-8750089)
chr5 (94-152)||(14626077-14626135)
chr5 (46-130)||(19353079-19353159)
chr5 (92-130)||(28641602-28641640)
chr5 (46-130)||(31093437-31093516)
chr5 (92-130)||(31162462-31162500)
chr5 (47-128)||(20892557-20892633)
chr5 (87-128)||(37813412-37813453)
chr5 (86-130)||(119794-119838)
chr5 (111-180)||(3935451-3935518)
chr5 (86-130)||(4186790-4186834)
chr5 (86-130)||(19352507-19352551)
chr5 (84-128)||(30351716-30351760)
chr5 (116-194)||(29751724-29751802)
chr5 (116-194)||(29752390-29752468)
chr5 (92-130)||(3192241-3192279)
chr5 (92-130)||(6543856-6543894)
chr5 (92-130)||(28641202-28641240)
chr5 (166-203)||(18339409-18339446)
chr5 (94-130)||(119054-119090)
chr5 (94-130)||(119968-120004)
chr5 (94-130)||(3406695-3406731)
chr5 (94-138)||(19353240-19353284)
[»] chr4 (61 HSPs)
chr4 (46-205)||(51906753-51906909)
chr4 (46-205)||(29691525-29691681)
chr4 (47-205)||(3296544-3296700)
chr4 (46-205)||(51906420-51906576)
chr4 (46-205)||(3296878-3297034)
chr4 (87-205)||(30608282-30608401)
chr4 (46-203)||(48553896-48554050)
chr4 (45-184)||(35166821-35166957)
chr4 (87-194)||(34129245-34129353)
chr4 (46-178)||(7118125-7118254)
chr4 (38-205)||(29691846-29692011)
chr4 (86-185)||(30608587-30608687)
chr4 (91-205)||(26168034-26168148)
chr4 (85-194)||(30047961-30048071)
chr4 (85-194)||(30062302-30062412)
chr4 (85-194)||(56106406-56106516)
chr4 (90-194)||(30952946-30953051)
chr4 (46-181)||(41510068-41510200)
chr4 (86-185)||(1791184-1791284)
chr4 (85-204)||(1791483-1791603)
chr4 (87-205)||(48760049-48760168)
chr4 (85-182)||(34129029-34129127)
chr4 (87-205)||(5544821-5544940)
chr4 (86-153)||(38759740-38759807)
chr4 (46-130)||(54142325-54142405)
chr4 (86-151)||(26984180-26984245)
chr4 (45-130)||(10580039-10580120)
chr4 (46-130)||(17288383-17288463)
chr4 (92-149)||(12108280-12108337)
chr4 (47-154)||(26168378-26168483)
chr4 (86-130)||(54143511-54143555)
chr4 (45-126)||(1791389-1791466)
chr4 (87-206)||(25916969-25917091)
chr4 (91-130)||(40841502-40841541)
chr4 (91-130)||(40841903-40841942)
chr4 (91-130)||(55347979-55348018)
chr4 (92-130)||(2669048-2669086)
chr4 (92-130)||(2669448-2669486)
chr4 (92-130)||(12922683-12922721)
chr4 (92-130)||(28957752-28957790)
chr4 (87-129)||(34294488-34294529)
chr4 (92-130)||(38026117-38026155)
chr4 (46-130)||(43979999-43980078)
chr4 (46-130)||(54167494-54167574)
chr4 (88-186)||(35469016-35469115)
chr4 (94-129)||(21235472-21235507)
chr4 (92-130)||(28505250-28505288)
chr4 (92-130)||(28957352-28957390)
chr4 (92-130)||(31227920-31227958)
chr4 (92-130)||(31228320-31228358)
chr4 (47-181)||(48759813-48759942)
chr4 (46-130)||(54168833-54168913)
chr4 (92-130)||(55347602-55347640)
chr4 (46-79)||(1791321-1791354)
chr4 (124-204)||(5545119-5545199)
chr4 (46-128)||(1317504-1317581)
chr4 (86-126)||(3296753-3296793)
chr4 (46-78)||(19310787-19310819)
chr4 (94-130)||(21235071-21235107)
chr4 (86-126)||(35166708-35166748)
chr4 (94-130)||(47053805-47053841)
[»] chr3 (46 HSPs)
chr3 (46-205)||(9218448-9218603)
chr3 (86-205)||(9217856-9217976)
chr3 (46-201)||(22814296-22814448)
chr3 (87-205)||(44504129-44504248)
chr3 (46-202)||(26741241-26741390)
chr3 (46-205)||(43933440-43933596)
chr3 (89-205)||(27013448-27013565)
chr3 (46-194)||(51471335-51471480)
chr3 (46-194)||(25770321-25770466)
chr3 (46-154)||(13637766-13637870)
chr3 (46-154)||(44504372-44504476)
chr3 (50-185)||(50732229-50732361)
chr3 (50-185)||(50780494-50780626)
chr3 (86-151)||(51755903-51755968)
chr3 (46-137)||(132062-132149)
chr3 (49-203)||(37172084-37172235)
chr3 (46-184)||(37172431-37172566)
chr3 (46-183)||(34743426-34743560)
chr3 (47-154)||(43933714-43933816)
chr3 (86-193)||(38485733-38485840)
chr3 (84-156)||(33225522-33225594)
chr3 (45-130)||(25770493-25770574)
chr3 (46-122)||(45728335-45728407)
chr3 (46-130)||(48868597-48868677)
chr3 (46-130)||(4199896-4199975)
chr3 (105-205)||(13637530-13637631)
chr3 (48-128)||(25770728-25770804)
chr3 (91-130)||(45539249-45539288)
chr3 (91-130)||(45539650-45539689)
chr3 (46-130)||(27475390-27475469)
chr3 (46-130)||(34949756-34949835)
chr3 (92-130)||(36899295-36899333)
chr3 (92-130)||(36899695-36899733)
chr3 (92-130)||(42606321-42606359)
chr3 (92-130)||(46689723-46689761)
chr3 (86-128)||(54588493-54588535)
chr3 (47-125)||(27013583-27013657)
chr3 (47-156)||(33226906-33227011)
chr3 (46-130)||(48867650-48867730)
chr3 (92-130)||(2388673-2388711)
chr3 (92-130)||(2389073-2389111)
chr3 (46-130)||(22407284-22407363)
chr3 (92-130)||(42606721-42606759)
chr3 (92-130)||(46690123-46690161)
chr3 (94-130)||(20826772-20826808)
chr3 (94-130)||(20831111-20831147)
[»] chr7 (38 HSPs)
chr7 (54-205)||(22948812-22948960)
chr7 (39-205)||(32092221-32092384)
chr7 (48-185)||(11974666-11974800)
chr7 (85-205)||(20543946-20544067)
chr7 (46-205)||(18152756-18152912)
chr7 (47-205)||(28838356-28838508)
chr7 (46-185)||(17075571-17075707)
chr7 (47-194)||(44803577-44803721)
chr7 (46-205)||(17075219-17075375)
chr7 (46-185)||(28852693-28852829)
chr7 (46-194)||(10466724-10466869)
chr7 (47-205)||(5029688-5029842)
chr7 (85-150)||(42750108-42750173)
chr7 (84-179)||(11975023-11975119)
chr7 (87-205)||(20544245-20544363)
chr7 (113-194)||(23548670-23548752)
chr7 (98-163)||(32092505-32092571)
chr7 (85-143)||(6621113-6621170)
chr7 (46-130)||(18443619-18443698)
chr7 (46-156)||(12933045-12933151)
chr7 (106-194)||(44803382-44803471)
chr7 (91-154)||(28854718-28854781)
chr7 (86-128)||(27311060-27311102)
chr7 (46-130)||(30939574-30939654)
chr7 (86-194)||(49053825-49053935)
chr7 (90-130)||(27310087-27310127)
chr7 (46-130)||(1244453-1244532)
chr7 (46-130)||(28898029-28898108)
chr7 (46-130)||(41298686-41298765)
chr7 (43-130)||(18443173-18443255)
chr7 (91-128)||(33848309-33848346)
chr7 (86-130)||(16755643-16755687)
chr7 (46-128)||(29783935-29784012)
chr7 (94-144)||(12908425-12908475)
chr7 (92-130)||(22954087-22954125)
chr7 (92-130)||(33847907-33847945)
chr7 (86-130)||(10466651-10466695)
chr7 (86-130)||(11992750-11992794)
[»] chr2 (52 HSPs)
chr2 (46-204)||(21267303-21267458)
chr2 (46-204)||(21182307-21182462)
chr2 (46-205)||(2517413-2517569)
chr2 (46-205)||(2191217-2191373)
chr2 (46-205)||(3691323-3691479)
chr2 (46-205)||(21217255-21217411)
chr2 (46-205)||(21264991-21265147)
chr2 (46-194)||(32114166-32114310)
chr2 (46-185)||(21216923-21217059)
chr2 (46-185)||(21265343-21265479)
chr2 (46-203)||(24093156-24093310)
chr2 (49-204)||(7083525-7083677)
chr2 (87-182)||(3691120-3691216)
chr2 (87-194)||(39729551-39729659)
chr2 (85-204)||(10706586-10706704)
chr2 (87-205)||(24093490-24093609)
chr2 (229-303)||(31357526-31357600)
chr2 (236-303)||(31252578-31252645)
chr2 (236-303)||(31304014-31304081)
chr2 (236-306)||(31422042-31422112)
chr2 (236-300)||(31372875-31372939)
chr2 (236-303)||(31290167-31290234)
chr2 (91-154)||(32114457-32114520)
chr2 (86-128)||(3624925-3624967)
chr2 (46-130)||(10709475-10709555)
chr2 (101-204)||(2606591-2606695)
chr2 (46-154)||(32860814-32860918)
chr2 (92-130)||(1804273-1804311)
chr2 (92-130)||(1804673-1804711)
chr2 (91-149)||(2036594-2036652)
chr2 (46-130)||(3854508-3854587)
chr2 (92-130)||(6476128-6476166)
chr2 (92-130)||(6476528-6476566)
chr2 (92-130)||(11451197-11451235)
chr2 (46-138)||(23222865-23222953)
chr2 (92-130)||(27377690-27377728)
chr2 (92-138)||(39096565-39096611)
chr2 (46-130)||(39947096-39947176)
chr2 (86-130)||(23221870-23221914)
chr2 (86-130)||(39945878-39945922)
chr2 (229-288)||(31317267-31317326)
chr2 (166-205)||(32861147-32861186)
chr2 (91-149)||(2035649-2035707)
chr2 (47-81)||(2606695-2606729)
chr2 (92-130)||(12090136-12090174)
chr2 (46-130)||(26525905-26525984)
chr2 (92-130)||(34037850-34037888)
chr2 (87-128)||(18105753-18105794)
chr2 (246-291)||(31383328-31383373)
chr2 (86-130)||(24093365-24093409)
chr2 (86-130)||(32861050-32861094)
chr2 (94-130)||(44934693-44934729)
[»] chr8 (36 HSPs)
chr8 (46-205)||(26997803-26997959)
chr8 (87-205)||(12489265-12489384)
chr8 (46-205)||(13315202-13315358)
chr8 (46-205)||(17915441-17915596)
chr8 (47-205)||(6297463-6297618)
chr8 (46-194)||(6297980-6298125)
chr8 (46-205)||(9800039-9800195)
chr8 (46-205)||(16662168-16662324)
chr8 (49-194)||(16662417-16662558)
chr8 (86-201)||(6297800-6297916)
chr8 (46-194)||(10047479-10047623)
chr8 (46-154)||(17914197-17914301)
chr8 (49-205)||(26243329-26243482)
chr8 (85-194)||(9800288-9800398)
chr8 (87-204)||(44024262-44024380)
chr8 (85-205)||(21006056-21006177)
chr8 (48-169)||(26720323-26720441)
chr8 (46-150)||(12489517-12489616)
chr8 (45-130)||(44024397-44024478)
chr8 (46-130)||(29917105-29917184)
chr8 (47-138)||(44148578-44148665)
chr8 (103-203)||(39234889-39234990)
chr8 (45-154)||(7344842-7344947)
chr8 (45-130)||(21005959-21006040)
chr8 (107-205)||(21005779-21005878)
chr8 (46-130)||(4624533-4624613)
chr8 (84-185)||(10047832-10047934)
chr8 (46-156)||(40304684-40304790)
chr8 (46-205)||(11089228-11089384)
chr8 (86-130)||(36155307-36155351)
chr8 (86-129)||(20682744-20682787)
chr8 (46-138)||(44803565-44803653)
chr8 (92-130)||(29917548-29917586)
chr8 (94-130)||(4694442-4694478)
chr8 (92-128)||(22601540-22601576)
chr8 (92-128)||(24846004-24846040)
[»] chr1 (43 HSPs)
chr1 (203-306)||(12389461-12389565)
chr1 (46-204)||(6751288-6751444)
chr1 (46-204)||(5172745-5172899)
chr1 (46-175)||(9880484-9880610)
chr1 (46-194)||(19895400-19895545)
chr1 (46-194)||(31436328-31436473)
chr1 (46-205)||(3591271-3591427)
chr1 (46-185)||(9880744-9880880)
chr1 (90-194)||(50359165-50359269)
chr1 (45-185)||(5683160-5683297)
chr1 (86-185)||(18180232-18180332)
chr1 (87-205)||(5683495-5683614)
chr1 (85-203)||(47541553-47541672)
chr1 (87-204)||(19895735-19895853)
chr1 (47-185)||(48155233-48155368)
chr1 (46-194)||(18179879-18180024)
chr1 (87-194)||(50359384-50359492)
chr1 (46-130)||(1500991-1501071)
chr1 (46-205)||(4288374-4288525)
chr1 (48-194)||(19976166-19976309)
chr1 (86-185)||(6751083-6751183)
chr1 (91-205)||(48155014-48155129)
chr1 (46-138)||(45664687-45664775)
chr1 (84-130)||(12869664-12869710)
chr1 (46-130)||(36793584-36793664)
chr1 (91-130)||(1500100-1500139)
chr1 (45-130)||(3591174-3591255)
chr1 (92-130)||(8997382-8997420)
chr1 (46-130)||(17968037-17968116)
chr1 (92-130)||(32266524-32266562)
chr1 (92-130)||(40124117-40124155)
chr1 (46-130)||(45230571-45230650)
chr1 (92-130)||(47410464-47410502)
chr1 (92-130)||(47410864-47410902)
chr1 (113-194)||(47541769-47541851)
chr1 (92-130)||(9122726-9122764)
chr1 (92-130)||(9123126-9123164)
chr1 (84-130)||(12868467-12868513)
chr1 (92-130)||(32266924-32266962)
chr1 (92-130)||(40124517-40124555)
chr1 (92-130)||(46802363-46802401)
chr1 (111-194)||(42723200-42723284)
chr1 (94-130)||(46802763-46802799)
[»] scaffold0009 (3 HSPs)
scaffold0009 (48-205)||(108056-108210)
scaffold0009 (46-205)||(107722-107878)
scaffold0009 (45-129)||(107894-107974)
[»] chr6 (28 HSPs)
chr6 (47-194)||(7645927-7646071)
chr6 (88-205)||(17157584-17157702)
chr6 (88-204)||(21113067-21113184)
chr6 (46-194)||(5974011-5974156)
chr6 (46-194)||(8710286-8710430)
chr6 (47-182)||(14712963-14713095)
chr6 (46-138)||(211441-211529)
chr6 (46-181)||(211679-211811)
chr6 (46-154)||(4510188-4510293)
chr6 (94-185)||(25932339-25932431)
chr6 (46-205)||(25932083-25932235)
chr6 (46-117)||(17157856-17157923)
chr6 (102-154)||(1869503-1869555)
chr6 (87-129)||(20522167-20522209)
chr6 (46-130)||(34984554-34984633)
chr6 (45-130)||(14712829-14712910)
chr6 (92-130)||(14257188-14257226)
chr6 (92-130)||(14257588-14257626)
chr6 (92-130)||(20824205-20824243)
chr6 (46-130)||(33107371-33107450)
chr6 (47-130)||(6162698-6162776)
chr6 (91-130)||(19595659-19595698)
chr6 (92-130)||(15147759-15147797)
chr6 (91-149)||(19579193-19579251)
chr6 (92-130)||(20824605-20824643)
chr6 (152-185)||(34527713-34527746)
chr6 (94-130)||(15148159-15148195)
chr6 (90-130)||(20521225-20521265)
[»] scaffold0063 (2 HSPs)
scaffold0063 (47-204)||(35127-35281)
scaffold0063 (48-182)||(34794-34925)
[»] scaffold0933 (1 HSPs)
scaffold0933 (46-185)||(491-627)
[»] scaffold0085 (2 HSPs)
scaffold0085 (92-130)||(39862-39900)
scaffold0085 (92-130)||(39462-39500)
[»] scaffold0148 (2 HSPs)
scaffold0148 (94-130)||(29318-29354)
scaffold0148 (94-130)||(33004-33040)


Alignment Details
Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 9 - 306
Target Start/End: Complemental strand, 38834892 - 38834612
Alignment:
Q  9 gattattcttgaagggagccactatgataattttataggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatt 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||                 ||||||||||||||    
T  38834892 gattattcttgaagggagccactatgataattttataggttaaatatatttttagtccttacgttttgc-----------------atagtccctacatt 38834810  T
Q  109 tcattaaatgtttttaaaatccacacatttgatctctgttatcaaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtggtta 208  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38834809 tcattaaatgtttttaaaattcacacatttgatctctgttatcaaattagtctctgctgttaattctctaacggaatattgatgtgctagttagtggtta 38834710  T
Q  209 gaaagccgtaagaaagttcaatgttgatgttactagcaataccttggagatctgcttgtactgggctggaaaagggacacagtctctaccaaataaat 306  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38834709 taaagccgtaagaaagttcaatgttgatgttactagcaataccttggagatctgcttgtactgggctggaaaagggacacagtctctaccaaataaat 38834612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 46 - 194
Target Start/End: Complemental strand, 31588437 - 31588291
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||| |||||||| |   ||||||||||||||||||||||||||||||||| ||||||||||||  |||||| |||||     
T  31588437 ggttaaatatgtttttagtccttacattttgcgtcc---cctttgaagaatagtccctacatttcattaaatatttttaaaatcctaacattttatctcc 31588341  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    |||||| ||||||||| ||| ||||||||||||||||||||  |||||||    
T  31588340 gttatcaaaattagtccctgctgttaattctctaacggaatgctgatgtg 31588291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 47 - 204
Target Start/End: Complemental strand, 87350 - 87196
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctg 146  Q
    |||||||||||||||||||||||  ||||| || |    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |    
T  87350 gttaaatatgtttttagtccttatattttgtgtcc----ctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctccg 87255  T
Q  147 ttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtg 204  Q
    ||||| |||||||||| || |||||||||||||||  ||| |||||||| |||||||||    
T  87254 ttatcaaaattagtctttgttgttaattctctaacataatgttgatgtggtagttagtg 87196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 18999730 - 18999574
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||| |||||| ||| ||  ||||||||||||||| ||||||||||||||| |||||||||||| ||||||| |||| |    
T  18999730 ggttaaatatgtttttagtccttacattttgc-ttc-at--tttgaagaatagtccatacatttcattaaatatttttaaaatcctcacattttatcttt 18999635  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| |||||| ||  || ||||||||||||||||||||  |||||||  |||||||||    
T  18999634 gttatcaaaattaatcattgttgttaattctctaacggaatgatgatgtggcagttagtgg 18999574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 194
Target Start/End: Complemental strand, 3935750 - 3935639
Alignment:
Q  84 tcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtta-tcaaattagtctctgatgttaattctctaacgg 182  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| |||| ||||| | ||||||||||||| ||||||||||||||||     
T  3935750 tcctttgaagaataatccctacatttcattaattgtttttaaaatcctcacattttatctttgttattaaaattagtctctgctgttaattctctaacga 3935651  T
Q  183 aatattgatgtg 194  Q
    ||| ||||||||    
T  3935650 aatgttgatgtg 3935639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 204
Target Start/End: Complemental strand, 8648155 - 8648000
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttg-aagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctc 144  Q
    ||||||||||| ||||||||||||| ||||||||     |||||| ||||||||||  ||||||||||||||| |||||||||||| |||||||  ||||    
T  8648155 ggttaaatatgattttagtccttacattttgcgt-----cctttggaagaatagtctttacatttcattaaatatttttaaaatcctcacattttttctc 8648061  T
Q  145 tgttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtg 204  Q
     |||||| |||||||||| || |||||||||| ||||||||| ||||||||  ||||||||    
T  8648060 cgttatcaaaattagtctatgttgttaattctttaacggaatgttgatgtggcagttagtg 8648000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 30415573 - 30415418
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||| ||||||||||||| |||    | || ||||| |||||||||||||||||||||||| |||||||||||||||| |||||||  ||||     
T  30415573 ggttaaatatggttttagtccttacattt----tacgctccttcgaagaatagtccctacatttcatt-aatgtttttaaaatcctcacattttgtctcc 30415479  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| ||||||| ||| | ||||||||||| ||||||||  ||||||| ||||||||||    
T  30415478 gttatcaaaattaggctcagctgttaattctccaacggaatgctgatgtgatagttagtgg 30415418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 18339108 - 18339229
Alignment:
Q  85 cctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacgga 183  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| |||||  | ||| |||||||||  || ||||||||||||||||||    
T  18339108 cctttgaagaatagtctctatatttcattaaatgtttttaaaatcctcacattttatctccatcatcaaaattagtccatgctgttaattctctaacgga 18339207  T
Q  184 atattgatgtgctagttagtgg 205  Q
    || ||||||||  |||||||||    
T  18339208 atgttgatgtgacagttagtgg 18339229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 47 - 175
Target Start/End: Complemental strand, 8750449 - 8750324
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctg 146  Q
    |||||||||||||||||||||||| |||||||||     |||||||||||||||||||||||| ||||||||| |||||||||| || |||| ||||| |    
T  8750449 gttaaatatgtttttagtccttacattttgcgttt----ctttgaagaatagtccctacattttattaaatgtgtttaaaatcctcatattttatctccg 8750354  T
Q  147 ttatc-aaattagtctctgatgttaattct 175  Q
    ||||| |||||||||  || ||||||||||    
T  8750353 ttatcaaaattagtccatgttgttaattct 8750324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 16284275 - 16284419
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctg 146  Q
    |||||||||||||||||||||||| |||||||||      ||||||||||||||  || |||| |||||||||||||||||||| || |||| ||||| |    
T  16284275 gttaaatatgtttttagtccttacattttgcgtttt----tttgaagaatagtctttatattttattaaatgtttttaaaatcctcatattttatctccg 16284370  T
Q  147 ttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    ||||| |||||||||  || ||||||||||||||||||||  |||||||    
T  16284371 ttatcaaaattagtcattgttgttaattctctaacggaatgctgatgtg 16284419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 31176507 - 31176652
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||  ||||||||     ||||||||||| ||||| |||||||||||||||||||||||||||  || |||| ||| |     
T  31176507 ggttaaatatgtttttagtccttatattttgcgt----ccctttgaagaacagtccatacatttcattaaatgtttttaaaatcgtcatattttatcccc 31176602  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    |||||| |||||||||  || |||||| ||| |||||||||| |||||||    
T  31176603 gttatcaaaattagtccttgctgttaactctttaacggaatactgatgtg 31176652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 3406913 - 3406805
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    ||||||||||||| || | |||| ||||||| |||||||||| | ||||||| |||||||||||| ||||||||| ||||| |||||| |||||||||||    
T  3406913 tttgaagaatagttccaatattttattaaatatttttaaaattctcacattttatctctgttatcaaaattagtccctgatattaattttctaacggaat 3406814  T
Q  186 attgatgtg 194  Q
     ||||||||    
T  3406813 gttgatgtg 3406805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 13987319 - 13987439
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgttttt-aaaatccacacatttgatctctgttatcaaa-ttagtctctgatgttaattctctaacggaa 184  Q
    ||||||||||| || ||| |||||||||||||||||| ||||| | ||||||| ||||| ||||| ||| |||||||||| |||||||||||||||||||    
T  13987319 tttgaagaataatctctatatttcattaaatgttttttaaaattctcacattttatctccgttattaaaattagtctctgctgttaattctctaacggaa 13987418  T
Q  185 tattgatgtgctagttagtgg 205  Q
    |  |||||||  |||||||||    
T  13987419 tgatgatgtgacagttagtgg 13987439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 46 - 154
Target Start/End: Original strand, 18999366 - 18999470
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||| ||||||  ||     ||||||||||||||| ||||||||||||||| |||||||||||| | ||||| |||||     
T  18999366 ggttaaatatgtttttagtccttacattttgcactct----tttgaagaatagtccatacatttcattaaatatttttaaaatcctctcattttatctcc 18999461  T
Q  146 gttatcaaa 154  Q
    |||||||||    
T  18999462 gttatcaaa 18999470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 204
Target Start/End: Original strand, 35373453 - 35373603
Alignment:
Q  45 aggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctc 144  Q
    ||||||||||| |||||||||||||| ||||| || |    ||||||||||      |||||||||||||||| |||||||||||| || |||| ||| |    
T  35373453 aggttaaatatatttttagtccttacattttgtgtcc----ctttgaagaa------ctacatttcattaaatatttttaaaatcctcatattttatccc 35373542  T
Q  145 tgttatcaaa-ttagtctctgatgttaattctctaacggaatattgatgtgctagttagtg 204  Q
     ||||| ||| |||||| ||| ||||||||||||||||||||| ||||||  |||||||||    
T  35373543 cgttattaaaattagtcactgctgttaattctctaacggaatactgatgtagtagttagtg 35373603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 90 - 203
Target Start/End: Original strand, 3406499 - 3406613
Alignment:
Q  90 gaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaatatt 188  Q
    |||||||||| | || |||||||||||||||||||||||||  | |||| |||||||||||| |||||| | ||||||||||||||| | || |||| ||    
T  3406499 gaagaatagttcatatatttcattaaatgtttttaaaatccttatattttatctctgttatcaaaattaatatctgatgttaattctttcacagaatgtt 3406598  T
Q  189 gatgtgctagttagt 203  Q
    ||||||  |||||||    
T  3406599 gatgtggcagttagt 3406613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 39 - 205
Target Start/End: Original strand, 15978382 - 15978544
Alignment:
Q  39 ttttataggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacattt 138  Q
    |||| ||||||||||||||||||||||||||  ||||| |||   |  || ||||||||||| ||| ||||||||||||||||||||||  | |||||||    
T  15978382 ttttttaggttaaatatgtttttagtccttatattttgtgtt---tttttggaagaatagtctctatatttcattaaatgtttttaaaa--ctcacattt 15978476  T
Q  139 gatctctgtta-tcaaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
     ||||| |||| | |||||||||  || |||||||||| |||| ||||  |||||||  |||||||||    
T  15978477 tatctcggttattaaaattagtcattgttgttaattctttaacagaatgctgatgtggcagttagtgg 15978544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 87019 - 87107
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacattt 138  Q
    |||||||||||||||||||| |||  |||||||||| |||   |||||||||  ||||||||||||||||||||||||||||||  |||||||    
T  87019 ggttaaatatgtttttagtctttatattttgcgttc-atc---tgaagaataacccctacatttcattaaatgtttttaaaatcttcacattt 87107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 35383292 - 35383377
Alignment:
Q  102 ctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaata 186  Q
    ||||||||||||||||||||||||||||| || |||| ||| | |||||| |||||||||  || |||||||| ||||||||||||    
T  35383292 ctacatttcattaaatgtttttaaaatcctcatattttatccccgttatcaaaattagtccatgctgttaattttctaacggaata 35383377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 22231250 - 22231170
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||||||||||  |||||||  |    |||| |||||||||||||| |||||||||||||||||| ||||||    
T  22231250 ggttaaatatgtttttagtccttatattttgcgccc----ctttaaagaatagtccctatatttcattaaatgtttttgaaatcc 22231170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 119184 - 119264
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||||||  ||||||||  ||  |||| ||||||||||| ||||||||| ||||||||||||||||||    
T  119184 ggttaaatatgtttttggtccttagattttgcgt--ga--ctttaaagaatagtccttacatttcaataaatgtttttaaaatcc 119264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 194
Target Start/End: Original strand, 1650041 - 1650152
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatca----aattagtctctgatgttaattctctaacgg 182  Q
    ||||||||||| |  |||||||| |||||||||||||||||| |  | |||| ||||| |||||||    ||||| |||||| |||||||||| ||||||    
T  1650041 tttgaagaatattatctacattttattaaatgtttttaaaattcttatattttatctccgttatcaaaataattaatctctgttgttaattctttaacgg 1650140  T
Q  183 aatattgatgtg 194  Q
    ||| ||||||||    
T  1650141 aatgttgatgtg 1650152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 129
Target Start/End: Complemental strand, 18340740 - 18340661
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatc 129  Q
    ||||||||||| ||||||||||||| | |||||  |    |||| ||||||||||| |||||||||||||||||||||||||||    
T  18340740 ggttaaatatgattttagtccttacatgttgcgccc----cttttaagaatagtccttacatttcattaaatgtttttaaaatc 18340661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 39402212 - 39402291
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| |||||||  ||||  ||||| ||||||||||||||||||| ||||||||||||||||||    
T  39402212 ggttaaatatgtttttggtccctacattttgcg--cgat--tttga-gaatagtccctacatttcaataaatgtttttaaaatcc 39402291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 130
Target Start/End: Original strand, 3191791 - 3191877
Alignment:
Q  39 ttttataggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||| ||||||||||||||||||||| ||| ||||||   ||||  ||||| ||||||||| ||||||||| ||||||||||||||||||    
T  3191791 ttttatgggttaaatatgtttttagtccctacattttgca--cgat--tttga-gaatagtccttacatttcaataaatgtttttaaaatcc 3191877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 21949398 - 21949479
Alignment:
Q  44 taggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||| |||| ||| |||| ||  ||||  ||||| ||||||||||||||||||| ||||||||||||||||||    
T  21949398 taggttaaatatgtttttggtccctacattttacg--cgat--tttga-gaatagtccctacatttcaataaatgtttttaaaatcc 21949479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 130
Target Start/End: Complemental strand, 21949880 - 21949841
Alignment:
Q  91 aagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  21949880 aagaatagtccctacatttcaataaatgtttttaaaatcc 21949841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 4187926 - 4187838
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacattt 138  Q
    ||||||||||||||||||||| ||| |||||||  | |  |||| || |||||||| ||||||||| ||||| |||||||||||| |||||||    
T  4187926 ggttaaatatgtttttagtccctacattttgcg--caa--ctttaaataatagtccttacatttcaataaatatttttaaaatcctcacattt 4187838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 5747240 - 5747202
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  5747240 agaatagtccctacatttcaataaatgtttttaaaatcc 5747202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 6543456 - 6543494
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  6543456 agaatagtccctacatttcaataaatgtttttaaaatcc 6543494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 129
Target Start/End: Original strand, 8750010 - 8750089
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatc 129  Q
    ||||||||||||||||| | ||||| |||||||  |    ||||||| |||| ||||||||||||||||||| |||||||||||    
T  8750010 ggttaaatatgtttttaattcttacattttgcgccc----ctttgaataataatccctacatttcattaaatatttttaaaatc 8750089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 14626135 - 14626077
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatca 152  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||  | ||||||||||    
T  14626135 aatagtccctacatttcaataaatgtttttaaaatccctacattttttatctgttatca 14626077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 19353159 - 19353079
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||||||  ||||| ||  ||  ||||||||||||||||  |||||||| ||||||||||||||||||    
T  19353159 ggttaaatatgtttttggtccttagattttgtgt--ga--ctttgaagaatagtcctcacatttcaataaatgtttttaaaatcc 19353079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 28641640 - 28641602
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  28641640 agaatagtccctacatttcaataaatgtttttaaaatcc 28641602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 31093516 - 31093437
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| |||||||  ||||  |||||| |||||||||||||||||| | ||||||||||||||||    
T  31093516 ggttaaatatgtttttggtccctacattttgcg--cgat--tttgaa-aatagtccctacatttcaatgaatgtttttaaaatcc 31093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 31162462 - 31162500
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  31162462 agaatagtccctacatttcaataaatgtttttaaaatcc 31162500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 20892633 - 20892557
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaat 128  Q
    |||||||||||||||| ||||||  ||||||||     | |||||||||||||| |||| ||| ||||||||||||||||||    
T  20892633 gttaaatatgtttttaatccttaaattttgcgt-----catttgaagaatagtctctacgtttaattaaatgtttttaaaat 20892557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 37813412 - 37813453
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaat 128  Q
    ||||||||||||||| ||||||||||||| ||||||||||||    
T  37813412 tttgaagaatagtccatacatttcattaagtgtttttaaaat 37813453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 119838 - 119794
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| | ||||||| ||||||||||||||||||    
T  119838 ctttgaagaatagtccttgcatttcaataaatgtttttaaaatcc 119794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 3935451 - 3935518
Alignment:
Q  111 attaaatgtttttaaaatccacacatttgatctctgttatcaa-attagtctctgatgttaattctctaac 180  Q
    |||||||||||||||||||| ||||||| |||||  ||||||| |||||||||   |||||||||||||||    
T  3935451 attaaatgtttttaaaatcctcacattttatctccattatcaatattagtctc---tgttaattctctaac 3935518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 4186790 - 4186834
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||||    
T  4186790 ctttgaagaatagtacctacatttcaataaatgtttttaatatcc 4186834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 19352507 - 19352551
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| | ||||||| ||||||||||||||||||    
T  19352507 ctttgaagaatagtccttgcatttcaataaatgtttttaaaatcc 19352551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 30351760 - 30351716
Alignment:
Q  84 tcctttgaagaatagtccctacatttcattaaatgtttttaaaat 128  Q
    |||||| ||||||||||||||||||||| ||||| ||||||||||    
T  30351760 tcctttaaagaatagtccctacatttcaataaatatttttaaaat 30351716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 29751724 - 29751802
Alignment:
Q  116 atgtttttaaaatccacacatttgatctctgttatcaaa-ttagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    ||||||||||||| | ||||||| ||||| ||||||||| |||||| |||   |||||||||||||||||| ||||||||    
T  29751724 atgtttttaaaattctcacattttatctc-gttatcaaaattagtccctgcgcttaattctctaacggaatgttgatgtg 29751802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 194
Target Start/End: Original strand, 29752390 - 29752468
Alignment:
Q  116 atgtttttaaaatccacacatttgatctctgttatcaaa-ttagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    ||||||||||||| | ||||||| ||||| ||||||||| |||||| |||   |||||||||||||||||| ||||||||    
T  29752390 atgtttttaaaattctcacattttatctc-gttatcaaaattagtccctgcgcttaattctctaacggaatgttgatgtg 29752468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 3192279 - 3192241
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  3192279 agaatagtccttacatttcaataaatgtttttaaaatcc 3192241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 6543894 - 6543856
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  6543894 agaataatccctacatttcaataaatgtttttaaaatcc 6543856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 28641202 - 28641240
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  28641202 agaataatccctacatttcaataaatgtttttaaaatcc 28641240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 18339446 - 18339409
Alignment:
Q  166 tgttaattctctaacggaatattgatgtgctagttagt 203  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  18339446 tgttaattctctaacgaaatattgatgtgatagttagt 18339409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 119054 - 119090
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  119054 aatagtccttacatttcaataaatgtttttaaaatcc 119090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 120004 - 119968
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  120004 aatagtccttacatttcaataaatgtttttaaaatcc 119968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 3406731 - 3406695
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  3406731 aatagtccttacatttcaataaatgtttttaaaatcc 3406695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 19353284 - 19353240
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatccacacattt 138  Q
    |||||||| ||||||||| |||| |||||||||||||| ||||||    
T  19353284 aatagtccttacatttcaataaacgtttttaaaatccatacattt 19353240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 51906909 - 51906753
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||| ||||||| ||    |||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||     
T  51906909 ggttaaatatgtttttagtccttacattttgcgctc----ctttgaagaatagtccctacatctcattaaatgtttttaaaatcctcacattttatctcc 51906814  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| |||||||| |||| |||||||||||||||||||| ||||||||  |||||||||    
T  51906813 gttatcaaaattagtttctgctgttaattctctaacggaatgttgatgtgagagttagtgg 51906753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 29691525 - 29691681
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcc-tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctc 144  Q
    ||||||||||||||||||||||||  ||||||     |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  29691525 ggttaaatatgtttttagtccttatattttgc-----atccatttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctc 29691619  T
Q  145 tgttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
     |||||| ||||||||||||  |||||||||||||| ||||| ||||||||  |||||||||    
T  29691620 cgttatcaaaattagtctctactgttaattctctaatggaatgttgatgtgacagttagtgg 29691681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 47 - 205
Target Start/End: Original strand, 3296544 - 3296700
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctg 146  Q
    |||||||||||||||||||||||| |||||||  |    |||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| |    
T  3296544 gttaaatatgtttttagtccttacattttgcgccc----ctttgaagaatattccctacatttcattaaatgtttttaaaatcctcacattttatctccg 3296639  T
Q  147 ttatc-aaattagt-ctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    ||||| |||||||| | |||||||||||||| |||||||||||||| |||  |||||||||    
T  3296640 ttatcaaaattagtcccctgatgttaattctttaacggaatattgacgtggcagttagtgg 3296700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 51906420 - 51906576
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||||||||||||| |||| |||||||       |||||||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||     
T  51906420 ggttaaatatgtttttagtctttacattttgcgcct----ctttgaagaatagtccctacgtttcattaaatgtttttaatatcctcacattttatctcc 51906515  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| ||||||||| |||||||||| ||| ||||||||||||||||||  |||||||||    
T  51906516 gttatcaaaattagtccctgatgttaactctttaacggaatattgatgtgacagttagtgg 51906576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 3297034 - 3296878
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||| |||||||||||||| |||||||    | ||||||||||||||||||||| ||||||||||||||||||||||||  |||||| |||||     
T  3297034 ggttaaatatatttttagtccttacattttgcg----accctttgaagaatagtccctacgtttcattaaatgtttttaaaatccttacattttatctcc 3296939  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| ||||||||| ||||| ||||| ||||||| ||||  |||||||  |||||||||    
T  3296938 gttatcaaaattagtccctgatattaatcctctaacagaatgctgatgtggcagttagtgg 3296878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 30608282 - 30608401
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    |||||||||||||||||||||||||||| || |||||||||||| ||||||| ||||| |||||| ||||||||||||| | ||||||||||||| | ||    
T  30608282 tttgaagaatagtccctacatttcattatatatttttaaaatcctcacattttatctccgttatcaaaattagtctctgctattaattctctaacaggat 30608381  T
Q  186 attgatgtgctagttagtgg 205  Q
    |||||||||  |||||||||    
T  30608382 attgatgtggcagttagtgg 30608401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 46 - 203
Target Start/End: Original strand, 48553896 - 48554050
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||| ||||||||||||||| ||||||||     ||||||||||||||||| ||||||||||||||  |||||||||||| ||||||| |||||     
T  48553896 ggttaaatacgtttttagtccttacattttgcgt----ccctttgaagaatagtccatacatttcattaaacctttttaaaatcctcacattttatctcc 48553991  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagt 203  Q
    |||||| |||||||||  || |||||||||| |||||||||  |||||||  |||||||    
T  48553992 gttatcaaaattagtcattgttgttaattctttaacggaatgctgatgtgacagttagt 48554050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 45 - 184
Target Start/End: Complemental strand, 35166957 - 35166821
Alignment:
Q  45 aggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctc 144  Q
    ||||||||||||| |||||| ||||| |||||||| |    ||| ||| |||| ||||  |||||||||||||||||||||||||| ||||||| |||||    
T  35166957 aggttaaatatgtctttagtgcttacattttgcgtcc----cttcgaaaaataatcccagcatttcattaaatgtttttaaaatcctcacattttatctc 35166862  T
Q  145 tgttatc-aaattagtctctgatgttaattctctaacggaa 184  Q
     |||||| ||||||||||||| |||||||||||||||||||    
T  35166861 cgttatcaaaattagtctctgctgttaattctctaacggaa 35166821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 34129353 - 34129245
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| |||||||||   | ||||||||||| ||||||||    
T  34129353 tttgaagaatagtccctacatttcattaaatatttttaaaatcctcacattttatctctgttatcaaaattagtccaagctgttaattctccaacggaat 34129254  T
Q  186 attgatgtg 194  Q
      |||||||    
T  34129253 gctgatgtg 34129245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 46 - 178
Target Start/End: Complemental strand, 7118254 - 7118125
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||| |||||||  |    |||||||||||||||| |||||||||||||||||||||||||| | || |||| |||||     
T  7118254 ggttaaatatgtttttagtccttacattttgcgccc----ctttgaagaatagtccatacatttcattaaatgtttttaaaattctcaaattttatctcc 7118159  T
Q  146 gttatc-aaattagtctctgatgttaattctcta 178  Q
     ||||| |||||||||  || |||||||||||||    
T  7118158 attatcaaaattagtccatgctgttaattctcta 7118125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 38 - 205
Target Start/End: Complemental strand, 29692011 - 29691846
Alignment:
Q  38 attttatagg-ttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacat 136  Q
    |||||||||| |||||||||||||||||| || | |||| || ||    ||||||| ||||||   || |||||||||||| |||||||||||| |||||    
T  29692011 attttataggattaaatatgtttttagtctttgcattttacgctc----ctttgaataatagtttttatatttcattaaatatttttaaaatcctcacat 29691916  T
Q  137 ttgatctctgttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    || |||||||||||| |||||||||  ||  ||||||||||||||||||  |||||||| ||||||||||    
T  29691915 tttatctctgttatcaaaattagtccatgcggttaattctctaacggaacgttgatgtggtagttagtgg 29691846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 86 - 185
Target Start/End: Complemental strand, 30608687 - 30608587
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaa 184  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||| ||| |||||||| | ||||||||    
T  30608687 ctttgaagaatagtctctatatttcattaaatgtttttaaaatcctcacattttatctccgttatcaaaattagtcactgttgttaattatttaacggaa 30608588  T
Q  185 t 185  Q
    |    
T  30608587 t 30608587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 205
Target Start/End: Original strand, 26168034 - 26168148
Alignment:
Q  91 aagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatcaaa-ttagtctctgatgttaattctctaacggaatattg 189  Q
    |||||||||  |||||||| ||||||| |||||||||||| ||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||  ||    
T  26168034 aagaatagtttctacattt-attaaatatttttaaaatcctcacattttatctccgttatcaaaattagtctctgctgttaattctctaacggaatgctg 26168132  T
Q  190 atgtgctagttagtgg 205  Q
    |||||  |||||||||    
T  26168133 atgtgacagttagtgg 26168148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 30048071 - 30047961
Alignment:
Q  85 cctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtta-tcaaattagtctctgatgttaattctctaacgga 183  Q
    ||||||||||| ||| | ||||||||||||||| |||||||||||| || |||| ||||| |||| | ||||||||||||| |||||||| |||||||||    
T  30048071 cctttgaagaacagttcttacatttcattaaatatttttaaaatcctcatattttatctccgttattaaaattagtctctgttgttaattatctaacgga 30047972  T
Q  184 atattgatgtg 194  Q
    || ||||||||    
T  30047971 atgttgatgtg 30047961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 30062412 - 30062302
Alignment:
Q  85 cctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtta-tcaaattagtctctgatgttaattctctaacgga 183  Q
    ||||||||||| ||| | ||||||||||||||| |||||||||||| || |||| ||||| |||| | ||||||||||||| |||||||| |||||||||    
T  30062412 cctttgaagaacagttcttacatttcattaaatatttttaaaatcctcatattttatctccgttattaaaattagtctctgttgttaattatctaacgga 30062313  T
Q  184 atattgatgtg 194  Q
    || ||||||||    
T  30062312 atgttgatgtg 30062302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 56106516 - 56106406
Alignment:
Q  85 cctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtta-tcaaattagtctctgatgttaattctctaacgga 183  Q
    ||||||||||||||| |||| |||| |||||||||||||||||||| | ||||| ||||| |||| | ||||||||| |||||||||||||||||||  |    
T  56106516 cctttgaagaatagttcctatattttattaaatgtttttaaaatcctctcattttatctccgttattaaaattagtccctgatgttaattctctaacata 56106417  T
Q  184 atattgatgtg 194  Q
    || ||||||||    
T  56106416 atgttgatgtg 56106406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 90 - 194
Target Start/End: Complemental strand, 30953051 - 30952946
Alignment:
Q  90 gaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtta-tcaaattagtctctgatgttaattctctaacggaatatt 188  Q
    ||||||| |||||||||||||||||||||||||||||||||  |||||| ||||| |||| | |||||||||  || ||||||||||||||| |||| ||    
T  30953051 gaagaatggtccctacatttcattaaatgtttttaaaatcctaacattttatctcggttattaaaattagtccttgttgttaattctctaacagaatgtt 30952952  T
Q  189 gatgtg 194  Q
    ||||||    
T  30952951 gatgtg 30952946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 46 - 181
Target Start/End: Original strand, 41510068 - 41510200
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||| |||||| ||||||| |||||||  |    |||||||||||||||||||||||| ||||||| ||| |||||||| || |||| |||||     
T  41510068 ggttaaatatatttttaatccttacattttgcgccc----ctttgaagaatagtccctacattttattaaatatttctaaaatcctcatattttatctcc 41510163  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacg 181  Q
     ||||| ||||||||| ||| ||||||||||||||||    
T  41510164 cttatcaaaattagtcactgttgttaattctctaacg 41510200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 1791184 - 1791284
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaa 184  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| || | || ||  |||||||| |||||||||  || |||||||||||||||||||    
T  1791184 ctttgaagaatagtccatacatttcattaaatgttttaaaaatcctcaaactttatacctgttatcaaaattagtcgatgttgttaattctctaacggaa 1791283  T
Q  185 t 185  Q
    |    
T  1791284 t 1791284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 1791603 - 1791483
Alignment:
Q  85 cctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatcaaa-ttagtctctgatgttaattctctaacgga 183  Q
    |||||||| |||||| |  |||||| |||||||||||||||||||   |||||| ||||| ||||| ||| |||||||||| ||||||||||||||| ||    
T  1791603 cctttgaaaaatagttctcacattttattaaatgtttttaaaatctttacattttatctccgttattaaaattagtctctgctgttaattctctaactga 1791504  T
Q  184 atattgatgtgctagttagtg 204  Q
    || ||||||||  ||||||||    
T  1791503 atgttgatgtggcagttagtg 1791483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 205
Target Start/End: Complemental strand, 48760168 - 48760049
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    ||||||||||||| | |||| ||||||||||||||||||||||  ||||||| |||||||||||| |||||| ||  || |||||||||||| | |||||    
T  48760168 tttgaagaatagttcgtacaattcattaaatgtttttaaaatcttcacattttatctctgttatcaaaattaatccatgttgttaattctctgaaggaat 48760069  T
Q  186 attgatgtgctagttagtgg 205  Q
     || |||||  |||||||||    
T  48760068 gttaatgtggcagttagtgg 48760049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 85 - 182
Target Start/End: Original strand, 34129029 - 34129127
Alignment:
Q  85 cctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatcaaa-ttagtctctgatgttaattctctaacgg 182  Q
    |||||||||||||||||||| |||| |||||| ||||||||||| | || |||| ||||  ||||||||| ||||||| || |||||||||||||||||    
T  34129029 cctttgaagaatagtccctatattttattaaacgtttttaaaattctcatattttatcttcgttatcaaagttagtctatgttgttaattctctaacgg 34129127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 5544821 - 5544940
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtta-tcaaattagtctctgatgttaattctctaacggaat 185  Q
    ||||||||||||| |||| |||||||||||| |||||||||| | ||||||| |||||  ||| |||||||||||  |  |||||||| | |||||||||    
T  5544821 tttgaagaatagttcctatatttcattaaatatttttaaaattctcacattttatctcctttattcaaattagtccatactgttaattttttaacggaat 5544920  T
Q  186 attgatgtgctagttagtgg 205  Q
     ||||||||  |||||||||    
T  5544921 gttgatgtggcagttagtgg 5544940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 153
Target Start/End: Original strand, 38759740 - 38759807
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatcaa 153  Q
    |||||||||||||||  |||||||||||||||||||||||||||| || |||| ||||| ||||||||    
T  38759740 ctttgaagaatagtctatacatttcattaaatgtttttaaaatcctcaaattttatctccgttatcaa 38759807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 54142325 - 54142405
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||| ||||||| ||| |||||||  |||  |||||||||||||||| ||||||||| ||||||||||||||||||    
T  54142325 ggttaaatatgttattagtccctacattttgcg--cga--ctttgaagaatagtccatacatttcaataaatgtttttaaaatcc 54142405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 26984180 - 26984245
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc 151  Q
    ||||||||||||||||||| | || |||||||||||||||||||| ||||||| ||||| ||||||    
T  26984180 ctttgaagaatagtccctagactttattaaatgtttttaaaatcctcacattttatctcagttatc 26984245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 10580039 - 10580120
Alignment:
Q  45 aggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||| |||| ||| ||||||||  ||  ||||||| |||||||| ||||||||| ||||||||||||||||||    
T  10580039 aggttaaatatgtttttggtccatacattttgcgt--ga--ctttgaaaaatagtccttacatttcaataaatgtttttaaaatcc 10580120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 17288463 - 17288383
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||| ||||||| ||| ||||||| |     ||||||| |||||||||||||||||| ||||||||||||||||||    
T  17288463 ggttaaatatgttattagtccctacattttgcgcta----ctttgaataatagtccctacatttcaataaatgtttttaaaatcc 17288383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 12108337 - 12108280
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtta 149  Q
    |||||||||||||||||||| ||||||||||||||||||  ||||||  |||||||||    
T  12108337 agaatagtccctacatttcaataaatgtttttaaaatccctacattttttctctgtta 12108280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 26168483 - 26168378
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtcc--ctacatttcattaaatgtttttaaaatccacacatttgatctc 144  Q
    |||||||||||||||| ||||||| |||||||  |    ||||| ||||||||||  |||||||| ||||||||||| |||||||  ||||||| ||||     
T  26168483 gttaaatatgtttttaatccttacattttgcgccc----ctttgtagaatagtcctcctacattttattaaatgtttctaaaatctccacattttatctt 26168388  T
Q  145 tgttatcaaa 154  Q
    ||||||||||    
T  26168387 tgttatcaaa 26168378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 54143555 - 54143511
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||||||| | ||||||||||||||||||    
T  54143555 ctttgaagaatagtccctacattttaataaatgtttttaaaatcc 54143511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 1791466 - 1791389
Alignment:
Q  45 aggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaa 126  Q
    ||||||||||||||||| | || ||||||||||||  ||  ||||||| |||||||| ||||||||| ||||||||||||||    
T  1791466 aggttaaatatgtttttggcccctacgttttgcgt--ga--ctttgaaaaatagtccttacatttcaataaatgtttttaaa 1791389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 25917091 - 25916969
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatct--ctgttat-caaattagtctctgatgttaattctctaacgga 183  Q
    ||||||||||| ||| ||||||||||||||||||||||||||   || |||| ||||   ||||||  |||||||| |||| | |||||||||||||| |    
T  25917091 tttgaagaataatccatacatttcattaaatgtttttaaaattttcatattttatcttcgtgttatgaaaattagtgtctgcttttaattctctaacgaa 25916992  T
Q  184 atattgatgtgctagttagtggt 206  Q
    ||  |||||||  ||||||||||    
T  25916991 atgctgatgtgacagttagtggt 25916969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 130
Target Start/End: Original strand, 40841502 - 40841541
Alignment:
Q  91 aagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  40841502 aagaatagtccctacatttcaataaatgtttttaaaatcc 40841541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 130
Target Start/End: Complemental strand, 40841942 - 40841903
Alignment:
Q  91 aagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  40841942 aagaatagtccctacatttcaataaatgtttttaaaatcc 40841903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 130
Target Start/End: Complemental strand, 55348018 - 55347979
Alignment:
Q  91 aagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  55348018 aagaatagtccctacatttcaataaatgtttttaaaatcc 55347979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 2669048 - 2669086
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  2669048 agaatagtccctacatttcaataaatgtttttaaaatcc 2669086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 2669486 - 2669448
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  2669486 agaatagtccctacatttcaataaatgtttttaaaatcc 2669448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 12922683 - 12922721
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  12922683 agaatagtccctacatttcaataaatgtttttaaaatcc 12922721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 28957790 - 28957752
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  28957790 agaatagtccctacatttcaataaatgtttttaaaatcc 28957752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 129
Target Start/End: Original strand, 34294488 - 34294529
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatc 129  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  34294488 tttgaagaatagtcc-tacatttcattaaatgtttttaaaatc 34294529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 38026155 - 38026117
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  38026155 agaatagtccctacatttcaataaatgtttttaaaatcc 38026117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 43980078 - 43979999
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| |||||||  ||||  ||||| ||||||||||||||||||| | ||||||||||||||||    
T  43980078 ggttaaatatgtttttggtccctacattttgcg--cgat--tttga-gaatagtccctacatttcaatgaatgtttttaaaatcc 43979999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 54167494 - 54167574
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||| ||||| ||| ||||||||  |||  ||| ||||||||||| || |||||| ||||||||||||||||||    
T  54167494 ggttaaatatgttttaagtccctacattttgcgt--gat--tttcaagaatagtccttatatttcaataaatgtttttaaaatcc 54167574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 35469115 - 35469016
Alignment:
Q  88 ttgaagaatagtccctacatttcattaaatgtttttaaaatccacaca-tttgatctctgttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    |||||||||| ||| |||||||||||||| ||||||||||||| || | ||| ||||| |||||| |||||| ||  || |||||||||| |||||||||    
T  35469115 ttgaagaataatccttacatttcattaaa-gtttttaaaatcctcaaatttttatctccgttatcaaaattaatccatgttgttaattctttaacggaat 35469017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 129
Target Start/End: Complemental strand, 21235507 - 21235472
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatc 129  Q
    |||||||||||||||||| |||||||||||||||||    
T  21235507 aatagtccctacatttcaataaatgtttttaaaatc 21235472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 28505250 - 28505288
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  28505250 agaatagtccttacatttcaataaatgtttttaaaatcc 28505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 28957352 - 28957390
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  28957352 agaataatccctacatttcaataaatgtttttaaaatcc 28957390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 31227920 - 31227958
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  31227920 agaataatccctacatttcaataaatgtttttaaaatcc 31227958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 31228358 - 31228320
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  31228358 agaatagttcctacatttcaataaatgtttttaaaatcc 31228320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 181
Target Start/End: Original strand, 48759813 - 48759942
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctg 146  Q
    ||||||||||||||||||| |||| |||| || ||     |||||| |||||||| ||| ||| |||||||||||||||||| | ||||||| |||||||    
T  48759813 gttaaatatgtttttagtcgttacattttacgctca----tttgaa-aatagtccttactttt-attaaatgtttttaaaattctcacattttatctctg 48759906  T
Q  147 ttatc-aaattagtctctgatgttaattctctaacg 181  Q
    |  || |||||||| ||||  ||||||| |||||||    
T  48759907 tcgtcaaaattagtttctgccgttaattttctaacg 48759942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 54168913 - 54168833
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||| ||| ||  ||||||||  ||  |||||||||||| ||||||||||| | ||||| ||||||||||||    
T  54168913 ggttaaatatgtttttaatccctatattttgcgt--ga--ctttgaagaataatccctacattttaataaatatttttaaaatcc 54168833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 55347602 - 55347640
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  55347602 agaatagtccctacattttaataaatgtttttaaaatcc 55347640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 1791321 - 1791354
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgt 79  Q
    ||||||||||||||||||||||||| ||||||||    
T  1791321 ggttaaatatgtttttagtccttacattttgcgt 1791354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 5545199 - 5545119
Alignment:
Q  124 aaaatccacacatttgatctctgttatcaaa-ttagtctctgatgttaattctctaacggaatattgatgtgctagttagtg 204  Q
    ||||||| ||||||| ||||| ||||||||| ||||||| || ||||||||||||||| ||| | ||| ||| |||||||||    
T  5545199 aaaatcctcacattttatctccgttatcaaaattagtct-tgttgttaattctctaacagaacactgaagtgatagttagtg 5545119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 1317581 - 1317504
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaat 128  Q
    |||||||||||||||| || | ||| |||||||  ||||  |||||| |||||||||||||||||| | ||||||||||||||    
T  1317581 ggttaaatatgtttttggttcctacattttgcg--cgat--tttgaa-aatagtccctacatttcaatgaatgtttttaaaat 1317504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 3296753 - 3296793
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaa 126  Q
    |||||||||||||||| ||||||| | ||||||||||||||    
T  3296753 ctttgaagaatagtccttacattttaataaatgtttttaaa 3296793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 19310787 - 19310819
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcg 78  Q
    ||||||||||||||||||||||||| |||||||    
T  19310787 ggttaaatatgtttttagtccttacattttgcg 19310819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 21235071 - 21235107
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  21235071 aatagtccttacatttcaataaatgtttttaaaatcc 21235107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 35166748 - 35166708
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaa 126  Q
    |||||||||||||||| ||||||| | ||||||||||||||    
T  35166748 ctttgaagaatagtccttacattttaataaatgtttttaaa 35166708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 47053805 - 47053841
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  47053805 aatagtccttacatttcaataaatgtttttaaaatcc 47053841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 1e-41; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 9218603 - 9218448
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||||| ||||||||||||||||||||||||  ||||||| ||||      
T  9218603 ggttaaatatgtttttagtcattacattttgcgctc----ctttgaagaatagtccctatatttcattaaatgtttttaaaatcatcacattttatcttc 9218508  T
Q  146 gttatcaaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    ||||||||||||||||||| ||||||||||||||||||||  ||||||| || |||||||    
T  9218507 gttatcaaattagtctctgttgttaattctctaacggaatgctgatgtgataattagtgg 9218448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 86 - 205
Target Start/End: Original strand, 9217856 - 9217976
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtta-tcaaattagtctctgatgttaattctctaacggaa 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||| | ||||||||| ||| |||||||||| ||||||||    
T  9217856 ctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctccgttattaaaattagtcactgttgttaattctttaacggaa 9217955  T
Q  185 tattgatgtgctagttagtgg 205  Q
      ||||||||  |||||||||    
T  9217956 cgttgatgtggcagttagtgg 9217976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 201
Target Start/End: Original strand, 22814296 - 22814448
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||| | ||||| |||||||  |    |||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||      
T  22814296 ggttaaatatgtttttaattcttacattttgcgccc----ctttgaagaatagtccatacatttcattaaatgtttttaaaatcctcacattttatcttc 22814391  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagtta 201  Q
    |||||| ||||||||| ||| | |||||| ||||||||||| |||||||| ||||||    
T  22814392 gttatcaaaattagtccctgctattaattttctaacggaatgttgatgtgatagtta 22814448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 44504129 - 44504248
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||| |||||| |||||||||  || ||||||||||||||||||||    
T  44504129 tttgaagaatagtccctacatttcattaaatatttttaaaatcctcacattttatctccgttatcaaaattagtccatgttgttaattctctaacggaat 44504228  T
Q  186 attgatgtgctagttagtgg 205  Q
      |||||||  |||||||||    
T  44504229 gatgatgtgacagttagtgg 44504248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 46 - 202
Target Start/End: Complemental strand, 26741390 - 26741241
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||| |||||||||||||||||  |    |||||||||||||||  |||||||||||    ||||||||||||| ||||||| ||||||    
T  26741390 ggttaaatatgttttaagtccttacgttttgcgccc----ctttgaagaatagtctttacatttcatt----gtttttaaaatcctcacattttatctct 26741299  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttag 202  Q
    |||||| |||||||||  || ||||||||||||||||||||  |||||||| ||||||    
T  26741298 gttatcaaaattagtcattgctgttaattctctaacggaatgctgatgtgccagttag 26741241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 43933440 - 43933596
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||| |||||||||||||| ||||| |  ||    ||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||      
T  43933440 ggttaaatatatttttagtccttacattttgtgcccg----tttgaagaatagtccctacatttcattaaatatttttaaaatcctcacattttatcttc 43933535  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| ||||||||| ||| |||||||||| ||| |||||  |||||||  |||||||||    
T  43933536 gttatcaaaattagtccctgttgttaattctataatggaatgctgatgtgacagttagtgg 43933596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 27013448 - 27013565
Alignment:
Q  89 tgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatca-aattagtctctgatgttaattctctaacggaatat 187  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||  |||||| ||||| ||||||| ||||||||| || |||||||||||||||||||||     
T  27013448 tgaagaatagttcctgcattttattaaatgtttttaaaatccttacattttatctccgttatcacaattagtctatgttgttaattctctaacggaatac 27013547  T
Q  188 tgatgtgctagttagtgg 205  Q
    |||||||  |||||||||    
T  27013548 tgatgtggcagttagtgg 27013565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 51471335 - 51471480
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||| ||||| ||||| ||||||||     |||||||||||||||  ||||||||||||||||||||||||||||| ||||||| |||||     
T  51471335 ggttaaatatgttcttagttcttacattttgcgt----ccctttgaagaatagtttctacatttcattaaatgtttttaaaatcctcacattttatctcc 51471430  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    |||||| |||||||||||||  |||  ||||||||  |||| ||||||||    
T  51471431 gttatcaaaattagtctctgtcgttggttctctaagagaatgttgatgtg 51471480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 25770321 - 25770466
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||| |||||||||||||||||||| |||||  | |    ||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||       
T  25770321 ggttcaatatgtttttagtccttacattttgtatcc----ctttgaagaatagtccctacatttcattaaatgtttttagaatcctcacattttatcatc 25770416  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    |||||| |||||| ||  || ||||||||||||||||||||  |||||||    
T  25770417 gttatcaaaattaatccatgttgttaattctctaacggaatgctgatgtg 25770466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 154
Target Start/End: Complemental strand, 13637870 - 13637766
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||||||| |||||||||| |||||||  |    ||||||||||||||| |||||||||||||||| |||||||||||| ||||||| |||||     
T  13637870 ggttaaatatgtttctagtccttacattttgcgccc----ctttgaagaatagtctctacatttcattaaatatttttaaaatcctcacattttatctcc 13637775  T
Q  146 gttatcaaa 154  Q
    |||||||||    
T  13637774 gttatcaaa 13637766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 154
Target Start/End: Complemental strand, 44504476 - 44504372
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||| |||||||||||||||| ||||||   |    |||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||     
T  44504476 ggttaaatgtgtttttagtccttacattttgcaccc----ctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacattttatctcc 44504381  T
Q  146 gttatcaaa 154  Q
    |||||||||    
T  44504380 gttatcaaa 44504372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 185
Target Start/End: Original strand, 50732229 - 50732361
Alignment:
Q  50 aaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtta 149  Q
    ||||||||||||  ||||||| ||||||| ||    ||||||| |||||||| ||||||||||||||| |||||||||||| | ||||| ||||| ||||    
T  50732229 aaatatgttttttatccttacattttgcgctc----ctttgaaaaatagtccatacatttcattaaatatttttaaaatcctcgcattttatctccgtta 50732324  T
Q  150 tc-aaattagtctctgatgttaattctctaacggaat 185  Q
    || ||||||||| ||| |||||||||||||| |||||    
T  50732325 tcaaaattagtccctgctgttaattctctaatggaat 50732361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 185
Target Start/End: Complemental strand, 50780626 - 50780494
Alignment:
Q  50 aaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtta 149  Q
    ||||||||||||  ||||||| ||||||| ||    ||||||| |||||||| ||||||||||||||| |||||||||||| | ||||| ||||| ||||    
T  50780626 aaatatgttttttatccttacattttgcgctc----ctttgaaaaatagtccatacatttcattaaatatttttaaaatcctcgcattttatctccgtta 50780531  T
Q  150 tc-aaattagtctctgatgttaattctctaacggaat 185  Q
    || ||||||||| ||| |||||||||||||| |||||    
T  50780530 tcaaaattagtccctgctgttaattctctaatggaat 50780494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 86 - 151
Target Start/End: Complemental strand, 51755968 - 51755903
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  51755968 ctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctccgttatc 51755903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 132149 - 132062
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatt 137  Q
    |||||||||||| |||||||||||| ||||||  ||    |||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  132149 ggttaaatatgtatttagtccttacattttgcactc----ctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacatt 132062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 203
Target Start/End: Original strand, 37172084 - 37172235
Alignment:
Q  49 taaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtt 148  Q
    ||||||| |||||||||||||| ||||||| |      ||| |||||||||| ||||||||||||||||||||||||||||| |||| || ||||| |||    
T  37172084 taaatatttttttagtccttacattttgcgctta----tttaaagaatagtctctacatttcattaaatgtttttaaaatcctcacagtttatctccgtt 37172179  T
Q  149 atc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagt 203  Q
    ||| ||||||||| | | ||  ||||||| |||||||| ||||||||  |||||||    
T  37172180 atcaaaattagtcccggctgaaaattctccaacggaatgttgatgtggcagttagt 37172235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 37172566 - 37172431
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||| |||||| ||||| |||||| ||| |    |||||||||||| | |||||| || |||||||||||||||||||  ||||||| ||||||    
T  37172566 ggttaaatatatttttaatccttgcgttttacgtcc----ctttgaagaataattcctacactttattaaatgtttttaaaatctccacattttatctct 37172471  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaa 184  Q
     ||||| |||||||||  || |||||||||||||||||||    
T  37172470 attatcaaaattagtccatgctgttaattctctaacggaa 37172431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 183
Target Start/End: Complemental strand, 34743560 - 34743426
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||||| | ||||||||||  |||||||     ||||||||||||  ||| |||||||||||||||||||| ||||||| ||||||| || | |    
T  34743560 ggttaaatatgtatctagtccttacactttgcgt----ccctttgaagaattatccttacatttcattaaatgttttaaaaatcctcacattttatatat 34743465  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacgga 183  Q
    |||||| |||||||||||||  ||||||||| |||||||    
T  34743464 gttatcaaaattagtctctgcggttaattctttaacgga 34743426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 43933816 - 43933714
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctg 146  Q
    ||||||||||||||||||||| || |||||||| |     |||||| ||||||| |||| |||||||||||||||||||||||| || |||| |||||||    
T  43933816 gttaaatatgtttttagtcctcacattttgcgtcca----tttgaaaaatagtctctac-tttcattaaatgtttttaaaatcctcatattttatctctg 43933722  T
Q  147 ttatcaaa 154  Q
    ||||||||    
T  43933721 ttatcaaa 43933714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 38485733 - 38485840
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaa 184  Q
    |||||||||||||||| ||||||| |||| |||||||||||||||   |||||  |||| |||||| |||||||||| || |||||||||| ||||||||    
T  38485733 ctttgaagaatagtccatacattttattatatgtttttaaaatccttgcattt-ttctccgttatcaaaattagtctttgctgttaattctttaacggaa 38485831  T
Q  185 tattgatgt 193  Q
    | |||||||    
T  38485832 tgttgatgt 38485840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 33225522 - 33225594
Alignment:
Q  84 tcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatcaaatt 156  Q
    ||||||||  |||||||||||||||| | |||||||||||||||||| ||||||| || ||||||| ||||||    
T  33225522 tcctttgataaatagtccctacatttaagtaaatgtttttaaaatccccacattttatatctgttaccaaatt 33225594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 25770493 - 25770574
Alignment:
Q  45 aggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||| ||||||| ||||||||  |||  |||||| |||||||  ||||||||| ||||||||||||||||||    
T  25770493 aggttaaatatgtttttaatccttacattttgcgt--gat--tttgaaaaatagtctttacatttcaataaatgtttttaaaatcc 25770574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 122
Target Start/End: Complemental strand, 45728407 - 45728335
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttt 122  Q
    ||||||||||||||||||||||||| ||||| || |    |||||||||||||||| ||||||||||||||| ||||    
T  45728407 ggttaaatatgtttttagtccttacattttgtgtcc----ctttgaagaatagtccatacatttcattaaatatttt 45728335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 48868677 - 48868597
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||| ||||||| ||| ||||||| |     ||||||| |||||||||||||||||| ||||||||||||||||||    
T  48868677 ggttaaatatgttattagtccctacattttgcgcta----ctttgaataatagtccctacatttcaataaatgtttttaaaatcc 48868597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 4199975 - 4199896
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| |||||||  ||||  ||||| ||||||||||||||||||| ||||||||||||||||||    
T  4199975 ggttaaatatgtttttggtccctacattttgcg--cgat--tttga-gaatagtccctacatttcaataaatgtttttaaaatcc 4199896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 205
Target Start/End: Original strand, 13637530 - 13637631
Alignment:
Q  105 catttcattaaatgtttttaaaatccacacatttgatctctgttatcaaa-ttagtctctgatgttaattctctaacggaatattgatgtgctagttagt 203  Q
    ||||||||||||| |||||||||||  || |||| ||||  ||||||||| ||||||| |   ||||||||||||||||||| ||||||||  |||||||    
T  13637530 catttcattaaatatttttaaaatcttcatattttatcttcgttatcaaaattagtctttaccgttaattctctaacggaatgttgatgtggcagttagt 13637629  T
Q  204 gg 205  Q
    ||    
T  13637630 gg 13637631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 25770804 - 25770728
Alignment:
Q  48 ttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaat 128  Q
    ||||||||||||||| ||||||| ||||||  ||     ||||||||||||| ||||||||| ||||||||||||||||||    
T  25770804 ttaaatatgtttttaatccttacattttgcactca----tttgaagaatagttcctacattttattaaatgtttttaaaat 25770728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 130
Target Start/End: Original strand, 45539249 - 45539288
Alignment:
Q  91 aagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  45539249 aagaatagtccctacatttcaataaatgtttttaaaatcc 45539288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 130
Target Start/End: Complemental strand, 45539689 - 45539650
Alignment:
Q  91 aagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  45539689 aagaatagtccctacatttcaataaatgtttttaaaatcc 45539650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 27475390 - 27475469
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| |||||||  ||||  ||||| ||||||||||||||||||| | ||||||||||||||||    
T  27475390 ggttaaatatgtttttggtccctacattttgcg--cgat--tttga-gaatagtccctacatttcaatgaatgtttttaaaatcc 27475469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 34949756 - 34949835
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| |||||||  ||||  ||||| ||||||||||||||||||| | ||||||||||||||||    
T  34949756 ggttaaatatgtttttggtccctacattttgcg--cgat--tttga-gaatagtccctacatttcaatgaatgtttttaaaatcc 34949835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 36899295 - 36899333
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  36899295 agaatagtccctacatttcaataaatgtttttaaaatcc 36899333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 36899733 - 36899695
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  36899733 agaatagtccctacatttcaataaatgtttttaaaatcc 36899695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 42606321 - 42606359
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  42606321 agaatagtccctacatttcaataaatgtttttaaaatcc 42606359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 46689723 - 46689761
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  46689723 agaatagtccctacatttcaataaatgtttttaaaatcc 46689761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 54588493 - 54588535
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaat 128  Q
    |||||||||||||||| ||||||||| ||||||||||||||||    
T  54588493 ctttgaagaatagtccatacatttcaataaatgtttttaaaat 54588535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 27013583 - 27013657
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaa 125  Q
    ||||||||||||||| |||||||| ||||||||  |||  ||||||||||||||| ||||||| | || ||||||||||    
T  27013583 gttaaatatgtttttggtccttacattttgcgt--gat--tttgaagaatagtccttacattttaatatatgtttttaa 27013657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 33227011 - 33226906
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctg 146  Q
    |||||||||||| ||||||| ||| ||||||| ||    ||||||  ||||||||||| |||| | |||||||||||||||||  || |||| || ||||    
T  33227011 gttaaatatgttcttagtccctacattttgcgctc----ctttgataaatagtccctatatttaagtaaatgtttttaaaatctccaaattttatatctg 33226916  T
Q  147 ttatcaaatt 156  Q
     |||||||||    
T  33226915 ctatcaaatt 33226906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 48867650 - 48867730
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||| ||||||| ||| ||||||| |     |||| || |||||||||||||||||| ||||| ||||||||||||    
T  48867650 ggttaaatatgttattagtccctacattttgcgcta----ctttaaataatagtccctacatttcaataaatatttttaaaatcc 48867730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 2388673 - 2388711
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  2388673 agaatagtctctacatttcaataaatgtttttaaaatcc 2388711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 2389111 - 2389073
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  2389111 agaatagtccctacattttaataaatgtttttaaaatcc 2389073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 22407363 - 22407284
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| |||||||  | ||  |||||| |||||||||||||||||| | ||||||||||||||||    
T  22407363 ggttaaatatgtttttggtccctacattttgcg--caat--tttgaa-aatagtccctacatttcaatgaatgtttttaaaatcc 22407284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 42606759 - 42606721
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  42606759 agaatagtccctacatttcaataaatatttttaaaatcc 42606721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 46690161 - 46690123
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  46690161 agaataatccctacatttcaataaatgtttttaaaatcc 46690123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 20826772 - 20826808
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  20826772 aatagtccttacatttcaataaatgtttttaaaatcc 20826808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 20831147 - 20831111
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  20831147 aatagtccttacatttcaataaatgtttttaaaatcc 20831111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 7e-40; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 54 - 205
Target Start/End: Complemental strand, 22948960 - 22948812
Alignment:
Q  54 atgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-a 152  Q
    ||||||||||||||||| |||||||    | |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| |||||| |    
T  22948960 atgtttttagtccttacattttgcg----accctttgaagaatagtctctacatttcattaaatgtttttaaaatcctcacattttatctccgttatcaa 22948865  T
Q  153 aattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||||||||  ||||||| |||||||||||||||||||||  |||||||||    
T  22948864 aattagtctctattgttaatgctctaacggaatattgatgtggcagttagtgg 22948812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 39 - 205
Target Start/End: Original strand, 32092221 - 32092384
Alignment:
Q  39 ttttataggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacattt 138  Q
    |||||| ||||||||||||||||||||||||| |||||||       |||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  32092221 ttttatgggttaaatatgtttttagtccttacattttgcgcct----ctttgaagaatagtccctgcatttcattaaatgtttttaaaatcctcacattt 32092316  T
Q  139 gatctctgttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
      | | ||||||| |||||||||| || |||||||||| |||||||||| |||||||  |||||||||    
T  32092317 tgtgtttgttatcaaaattagtctttgttgttaattctataacggaatactgatgtggcagttagtgg 32092384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 48 - 185
Target Start/End: Original strand, 11974666 - 11974800
Alignment:
Q  48 ttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgt 147  Q
    ||||||||| ||||||||||||| ||||||| ||    ||||||| |||||||  |||||||||||||||||||||||||||| ||||||| ||||  ||    
T  11974666 ttaaatatgattttagtccttacattttgcgctc----ctttgaaaaatagtctgtacatttcattaaatgtttttaaaatcctcacattttatcttcgt 11974761  T
Q  148 tatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    |||| |||||||||| || ||||||||||||||||||||    
T  11974762 tatcaaaattagtctttgttgttaattctctaacggaat 11974800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 20543946 - 20544067
Alignment:
Q  85 cctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacgga 183  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| || |||| ||||| |||||| |||||||| |||| ||||||||||||||||      
T  20543946 cctttgaagaatagtccctacatttcattaaatttttttaaaatcctcatattttatctccgttatcaaaattagtttctgctgttaattctctaacgag 20544045  T
Q  184 atattgatgtgctagttagtgg 205  Q
    ||  ||||||| ||||||||||    
T  20544046 atggtgatgtgatagttagtgg 20544067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 18152756 - 18152912
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||| ||| ||||| |||||||  |    ||||||||||||||||||||||||  ||||||||| ||||||||| ||||||| |||||     
T  18152756 ggttaaatatgttttcagttcttacattttgcgccc----ctttgaagaatagtccctacattttgttaaatgttcttaaaatcctcacattttatctcc 18152851  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| |||||||  |||| ||||||||||||||||||||  |||||||  |||||||||    
T  18152852 gttatcaaaattagcttctgttgttaattctctaacggaatgctgatgtgacagttagtgg 18152912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 47 - 205
Target Start/End: Original strand, 28838356 - 28838508
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctg 146  Q
    ||||||||||||||||||| |||| ||||| ||     |||||||||||  ||||| ||||||||||||||||||||||||||| ||||||| ||||| |    
T  28838356 gttaaatatgtttttagtctttacattttgtgt-----cctttgaagaa--gtcccgacatttcattaaatgtttttaaaatcctcacattttatctccg 28838448  T
Q  147 ttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    ||||| |||||||||  || |||||||||||||||| |||  |||||||  |||||||||    
T  28838449 ttatcaaaattagtcattggtgttaattctctaacgaaatgctgatgtggcagttagtgg 28838508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 17075707 - 17075571
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||| |||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||     
T  17075707 ggttaaatatctttttagtccttacattttgcgcct----ctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctcc 17075612  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
      |||| |||||||||  || | ||||||||||||||||||    
T  17075611 actatcaaaattagtccttgctattaattctctaacggaat 17075571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 194
Target Start/End: Complemental strand, 44803721 - 44803577
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctg 146  Q
    |||||||||||||||||||||||| ||||||| |     |||| |||||||||| ||||||||||||||||||||||||||| | ||||||| ||||| |    
T  44803721 gttaaatatgtttttagtccttacattttgcgctt----ctttaaagaatagtctctacatttcattaaatgtttttaaaattctcacattttatctccg 44803626  T
Q  147 ttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    ||||| |||||||||  || || | ||| ||||||||||| ||||||||    
T  44803625 ttatcaaaattagtccatgctgatcattttctaacggaatgttgatgtg 44803577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 17075219 - 17075375
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||  |||||||  ||   ||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||| |     
T  17075219 ggttaaatatgtttttagtccttatattttgcgc-cg---ctttgaagaatagtccctacatttcattaaaagtttttaaaatcctcacattttatcccc 17075314  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||| | |||||||||  ||  ||||||||| |||||||||  |||||||  |||||||||    
T  17075315 gttaacaaaattagtccttgccgttaattctttaacggaatgctgatgtggcagttagtgg 17075375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 28852693 - 28852829
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||| ||||||| ||||| || |     ||| || |||| |||||||||||||||||||||||||||||||| ||||||| ||| |     
T  28852693 ggttaaatatgtttttaatccttacattttgtgtcca----tttaaataatactccctacatttcattaaatgtttttaaaatcctcacattttatcccc 28852788  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    |||||| ||||||| ||||| |||||||||||||| |||||    
T  28852789 gttatcaaaattagcctctgttgttaattctctaagggaat 28852829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 46 - 194
Target Start/End: Complemental strand, 10466869 - 10466724
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||| || |||| |||||||| | ||   ||||||||||||| ||| |||| |||||||||||||||||||  ||||||| |||||     
T  10466869 ggttaaatatgtttttaatctttacattttgcgt-ctat---ttgaagaatagtctctatattttattaaatgtttttaaaatcgtcacattttatctcc 10466774  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
     ||||| |||||||| | || | |||||||||||||||||| ||||||||    
T  10466773 attatcaaaattagtttatgctattaattctctaacggaatgttgatgtg 10466724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 47 - 205
Target Start/End: Complemental strand, 5029842 - 5029688
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctg 146  Q
    ||||||||| ||||||||| |||| ||||||||      ||||||||||||||||||| |||||||||||||||||| |||||| ||||||| ||||| |    
T  5029842 gttaaatatatttttagtcgttacattttgcgtct----ctttgaagaatagtccctatatttcattaaatgttttt-aaatcctcacattttatctccg 5029748  T
Q  147 ttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
     |||| |||||||||  || |||||||| |||||| ||||  |||||||  |||||||||    
T  5029747 ctatcaaaattagtccatgttgttaattatctaacagaatgctgatgtggcagttagtgg 5029688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 42750173 - 42750108
Alignment:
Q  85 cctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttat 150  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||| |||||    
T  42750173 cctttgaagaatagtccctacatttcattaaacgtttttaaaatcctcacattttatctccgttat 42750108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 179
Target Start/End: Complemental strand, 11975119 - 11975023
Alignment:
Q  84 tcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaa 179  Q
    ||||||||| |||||||  ||| ||| |||||||||||||||||||| ||||||| || || |||||| ||||||||||||| ||||||||||||||    
T  11975119 tcctttgaaaaatagtctttacgttttattaaatgtttttaaaatcctcacattttatttccgttatcaaaattagtctctgttgttaattctctaa 11975023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 87 - 205
Target Start/End: Complemental strand, 20544363 - 20544245
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    ||||||||||||||| |||||||||||||||||||||||||| | ||||||| ||||  |||||| |||| ||||  || | |||||||||||||| |||    
T  20544363 tttgaagaatagtccttacatttcattaaatgtttttaaaat-ctcacattttatcttcgttatcaaaatcagtcgttgctattaattctctaacgtaat 20544265  T
Q  186 attgatgtgctagttagtgg 205  Q
     ||||||||  |||||||||    
T  20544264 gttgatgtggcagttagtgg 20544245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 23548670 - 23548752
Alignment:
Q  113 taaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    |||||||||||||||| | ||||||| |||||||||||| |||||||||| || ||||||||||||||||||||  |||||||    
T  23548670 taaatgtttttaaaatactcacattttatctctgttatcaaaattagtctttgttgttaattctctaacggaatgctgatgtg 23548752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 98 - 163
Target Start/End: Complemental strand, 32092571 - 32092505
Alignment:
Q  98 gtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctct 163  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||    
T  32092571 gtccctacatttcattaaatgtttttaaaatcctcacattttatctccgttatcaaaattagtctct 32092505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 143
Target Start/End: Complemental strand, 6621170 - 6621113
Alignment:
Q  85 cctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatct 143  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  6621170 cctttgaagaatagtccctacatttcattaaatg-ttttaaaatcctcacattttatct 6621113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 18443698 - 18443619
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||||||| |||||||  ||||  ||||| ||||||||||||||||||| ||||||||||||||||||    
T  18443698 ggttaaatatgtttttggtccttacattttgcg--cgat--tttga-gaatagtccctacatttcaataaatgtttttaaaatcc 18443619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 12933151 - 12933045
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||| ||| ||||| ||||    ||||||  ||||||||||| |||| | ||||||||| |||||||| ||||||| || |||    
T  12933151 ggttaaatatgtttttagtccctacattttgtgttc----ctttgataaatagtccctatatttaagtaaatgtttctaaaatcctcacattttatatct 12933056  T
Q  146 gttatcaaatt 156  Q
    |||| ||||||    
T  12933055 gttaccaaatt 12933045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 44803382 - 44803471
Alignment:
Q  106 atttcattaaatgtttttaaaatccacacatttgatctctgttatcaaa-ttagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    |||| ||||||| ||||||||||||  | |||| ||||||| ||||||| |||||||||| |||||||||||||||| ||| ||||||||    
T  44803382 attttattaaatatttttaaaatccttatattttatctctgctatcaaaattagtctctgttgttaattctctaacgaaatgttgatgtg 44803471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 28854718 - 28854781
Alignment:
Q  91 aagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatcaaa 154  Q
    ||||||| ||||||||||| |||||||||||||||||||| ||||||| || || |||||||||    
T  28854718 aagaatactccctacattttattaaatgtttttaaaatcctcacattttatttcagttatcaaa 28854781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 27311102 - 27311060
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaat 128  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  27311102 ctttaaagaatagtccctacatttcattaaatgtttttaaaat 27311060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 30939654 - 30939574
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||||||| ||| |||| ||  | ||  || |||||||||||||||||||||||||||| ||||||||||||    
T  30939654 ggttaaatatgtttttagtccctacattttacg--ccat--ttcgaagaatagtccctacatttcattaaatatttttaaaatcc 30939574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 194
Target Start/End: Complemental strand, 49053935 - 49053825
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct-gttatc-aaattagtctctgatgttaattctctaacgga 183  Q
    ||||||| |||| |||||||||||||||||| ||||||||||||| ||| ||| || | |  ||||| |||||||||| || | ||||| ||||||||||    
T  49053935 ctttgaaaaataatccctacatttcattaaaagtttttaaaatcctcacgttttatttttcattatcaaaattagtctatgctattaatgctctaacgga 49053836  T
Q  184 atattgatgtg 194  Q
    || ||||||||    
T  49053835 atgttgatgtg 49053825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 27310087 - 27310127
Alignment:
Q  90 gaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  27310087 gaagaatggtccctacatttcattaaatgtttttaaaatcc 27310127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 1244532 - 1244453
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| |||||||  ||||  ||||| ||||||||||||||||||| | ||||||||||||||||    
T  1244532 ggttaaatatgtttttggtccctacattttgcg--cgat--tttga-gaatagtccctacatttcaatgaatgtttttaaaatcc 1244453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 28898029 - 28898108
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| |||||||  ||||  ||||| ||||||||||||||||||| | ||||||||||||||||    
T  28898029 ggttaaatatgtttttggtccctacattttgcg--cgat--tttga-gaatagtccctacatttcaatgaatgtttttaaaatcc 28898108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 41298765 - 41298686
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| |||||||  ||||  ||||| ||||||||||||||||||| | ||||||||||||||||    
T  41298765 ggttaaatatgtttttggtccctacattttgcg--cgat--tttga-gaatagtccctacatttcaatgaatgtttttaaaatcc 41298686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 130
Target Start/End: Original strand, 18443173 - 18443255
Alignment:
Q  43 ataggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||||| |||| ||| ||||||   ||||  ||||| ||||||||| ||||||||| ||||||||||||||||||    
T  18443173 ataggttaaatatgtttttggtccctacattttgca--cgat--tttga-gaatagtccttacatttcaataaatgtttttaaaatcc 18443255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 128
Target Start/End: Complemental strand, 33848346 - 33848309
Alignment:
Q  91 aagaatagtccctacatttcattaaatgtttttaaaat 128  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  33848346 aagaatagtccctacatttcaataaatgtttttaaaat 33848309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 16755687 - 16755643
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||||    
T  16755687 ctttgaagaatagtctctatatttcattaaatatttttaaaatcc 16755643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Original strand, 29783935 - 29784012
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaat 128  Q
    ||||||||||||||||||||| ||| ||||| |  ||||  ||||| |||||||||||| |||||| ||||||||||||||||    
T  29783935 ggttaaatatgtttttagtccctacattttgtg--cgat--tttga-gaatagtccctatatttcaataaatgtttttaaaat 29784012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 12908425 - 12908475
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatccacacatttgatctc 144  Q
    |||| ||||||||||| | |||||||||||||||||| ||||||| |||||    
T  12908425 aataatccctacatttaactaaatgtttttaaaatcctcacattttatctc 12908475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 22954087 - 22954125
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  22954087 agaatagtccctacattttaataaatgtttttaaaatcc 22954125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 33847907 - 33847945
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  33847907 agaatagtctctacatttcaataaatgtttttaaaatcc 33847945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 10466651 - 10466695
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||| |||||||| ||||||||| |||||||||||| |||||    
T  10466651 ctttgaaaaatagtccttacatttcaataaatgtttttataatcc 10466695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 11992750 - 11992794
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||| |||||| |||||||||||| ||| ||||||||||||||||    
T  11992750 ctttaaagaattgtccctacattttatttaatgtttttaaaatcc 11992794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 46 - 204
Target Start/End: Complemental strand, 21267458 - 21267303
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||| ||||    ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || |      
T  21267458 ggttaaatatgtttttagtccttacatttt----tcgatcctttgaagaatagtccctacatttcattaaatgttttaaaaatcctcacattttatattc 21267363  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtg 204  Q
     ||||| ||||||||| |||||||||||||||||| |||||  |||||||| ||||||||    
T  21267362 attatcaaaattagtcactgatgttaattctctaatggaatgctgatgtgccagttagtg 21267303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 46 - 204
Target Start/End: Original strand, 21182307 - 21182462
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||| |||||||  |    |||||||||||||||| ||||||||||||||||||||||||||   ||||||| ||||||    
T  21182307 ggttaaatatgtttttagtccttacattttgcgccc----ctttgaagaatagtccttacatttcattaaatgtttttaaaattttcacattttatctct 21182402  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtg 204  Q
    |||||| ||||||||||||| |||||||||||||||| |||  |||||||  ||||||||    
T  21182403 gttatcaaaattagtctctgttgttaattctctaacgaaatgctgatgtggcagttagtg 21182462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 2517413 - 2517569
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||| |||||||||||||| ||||||||      ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||     
T  2517413 ggttaaatatatttttagtccttacattttgcgtct----ctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctcc 2517508  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| |||||||||| || |||||| ||| |||||||||  |||||||  |||||||||    
T  2517509 gttatcaaaattagtctttgttgttaactctttaacggaatgctgatgtggcagttagtgg 2517569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 2191217 - 2191373
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||| |||||||  |    |||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||     
T  2191217 ggttaaatatgtttttagtccttacattttgcgccc----ctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacattttatctcc 2191312  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| |||||||||  || |||||||||| ||||| | || |||||||  |||||||||    
T  2191313 gttatcaaaattagtccatgttgttaattctttaacgaactactgatgtggcagttagtgg 2191373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 3691479 - 3691323
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||||||||||||||||   |||||||  |    ||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||     
T  3691479 ggttaaatatgtttttagtccttgtattttgcgccc----ctttgaagaatagtccctacatttcattaaatgtttttaaaatcttcacattttatctcc 3691384  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| |||||||||  || |||||||| ||||||||||| ||||||||  |||||||||    
T  3691383 gttatcaaaattagtccatgctgttaattttctaacggaatgttgatgtggcagttagtgg 3691323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 21217411 - 21217255
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||| |||||||  ||   ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |     
T  21217411 ggttaaatatgtttttagtccttacattttgcgc-cg---ctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatcccc 21217316  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||| | ||||||||| |||  ||||||||| |||||||||  |||||||  |||||||||    
T  21217315 gttaacaaaattagtccctgccgttaattctttaacggaatgctgatgtggcagttagtgg 21217255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 21264991 - 21265147
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||| |||||||  ||   ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |     
T  21264991 ggttaaatatgtttttagtccttacattttgcgc-cg---ctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatcccc 21265086  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||| | ||||||||| |||  ||||||||| |||||||||  |||||||  |||||||||    
T  21265087 gttaacaaaattagtccctgccgttaattctttaacggaatgctgatgtggcagttagtgg 21265147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 32114166 - 32114310
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||| |||| ||      |||||||||||||||||||||| |  |||||||||||||||||||| ||||||| ||||||    
T  32114166 ggttaaatatgtttttagtccttacattttacgc-----cctttgaagaatagtccctacaatctattaaatgtttttaaaatcctcacattttatctct 32114260  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    | |||| ||||||||| ||  |||||||||||||||||||| ||||||||    
T  32114261 gatatcaaaattagtcgctactgttaattctctaacggaatgttgatgtg 32114310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 21216923 - 21217059
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||| |||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||     
T  21216923 ggttaaatatctttttagtccttacattttgcgcct----ctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctcc 21217018  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
      |||| |||||||||  || ||||||||||||||||||||    
T  21217019 actatcaaaattagtccttgctgttaattctctaacggaat 21217059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 21265479 - 21265343
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||| |||||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||     
T  21265479 ggttaaatatctttttagtccttacattttgcgcct----ctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacattttatctcc 21265384  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
      |||| |||||||||  || ||||||||||||||||||||    
T  21265383 actatcaaaattagtccttgctgttaattctctaacggaat 21265343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 46 - 203
Target Start/End: Original strand, 24093156 - 24093310
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||||||||||||||||||  ||||||  |    ||||||||||||||||||||||||||||||||||||||||||||| ||||| |  |||      
T  24093156 ggttaaatatgtttttagtccttacactttgcgccc----ctttgaagaatagtccctacatttcattaaatgtttttaaaatcctcacatcttctcttc 24093251  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagt 203  Q
    |||||| |||| ||||  || ||||||||||||||||||||  |||||||  |||||||    
T  24093252 gttatcaaaatcagtccatgttgttaattctctaacggaatgctgatgtgacagttagt 24093310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 204
Target Start/End: Original strand, 7083525 - 7083677
Alignment:
Q  49 taaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtt 148  Q
    |||||||||||||| ||||||| |||| ||| |     ||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||  ||    
T  7083525 taaatatgtttttaatccttacattttacgtcca----tttgaagaatagtccctacatttcattaaatttttttaaaatcctcacattttatctccctt 7083620  T
Q  149 at-caaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtg 204  Q
    ||  ||| |||| |||| ||||||||||||||||||||  |||||||  ||||||||    
T  7083621 ataaaaaatagtatctgttgttaattctctaacggaatgctgatgtggcagttagtg 7083677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 87 - 182
Target Start/End: Original strand, 3691120 - 3691216
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacgg 182  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||| | |||||| ||||||||| |||  ||||||||||||||||    
T  3691120 tttgaagaatagttcctacatttcattaaatgtttttaaaatcctcacattttatcaccgttatcaaaattagtccctgcagttaattctctaacgg 3691216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 39729659 - 39729551
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    ||||||||||||||  || |||||||||||| |||||||||||| ||||||| ||||| |||||| |||||||||| || ||||||||||||||||||||    
T  39729659 tttgaagaatagtctttatatttcattaaatatttttaaaatcctcacattttatctccgttatcgaaattagtctatgttgttaattctctaacggaat 39729560  T
Q  186 attgatgtg 194  Q
     || |||||    
T  39729559 gttaatgtg 39729551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 10706704 - 10706586
Alignment:
Q  85 cctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacgga 183  Q
    ||||||||||||||||  || |||||||||||| |||||||||||| ||||||| ||||| |||||| ||| ||||| ||| ||||||||||||||| ||    
T  10706704 cctttgaagaatagtc--tatatttcattaaatatttttaaaatcctcacattttatctccgttatcaaaactagtccctgctgttaattctctaacaga 10706607  T
Q  184 atattgatgtgctagttagtg 204  Q
    || ||||||||  ||||||||    
T  10706606 atgttgatgtggcagttagtg 10706586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 87 - 205
Target Start/End: Complemental strand, 24093609 - 24093490
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    ||||||||||||| |||| |||| ||||||||||||||||||||  |||||| ||||| |||||| |||||||||  || | |||||||| |||||||||    
T  24093609 tttgaagaatagtgcctatattttattaaatgtttttaaaatccttacattttatctccgttatcaaaattagtccatgctcttaattctttaacggaat 24093510  T
Q  186 attgatgtgctagttagtgg 205  Q
    | |||| || ||||||||||    
T  24093509 actgatatggtagttagtgg 24093490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 229 - 303
Target Start/End: Complemental strand, 31357600 - 31357526
Alignment:
Q  229 atgttgatgttactagcaataccttggagatctgcttgtactgggctggaaaagggacacagtctctaccaaata 303  Q
    |||||| ||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| || |||||||    
T  31357600 atgttgttgttactagtaataccttggagatccgcttgtattgggctggaaaagggacacagtcactcccaaata 31357526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 31252645 - 31252578
Alignment:
Q  236 tgttactagcaataccttggagatctgcttgtactgggctggaaaagggacacagtctctaccaaata 303  Q
    ||||||||| ||||||||||||||| || |||| |||||||||||||||||||||||||| |||||||    
T  31252645 tgttactagtaataccttggagatccgcctgtattgggctggaaaagggacacagtctctcccaaata 31252578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 31304081 - 31304014
Alignment:
Q  236 tgttactagcaataccttggagatctgcttgtactgggctggaaaagggacacagtctctaccaaata 303  Q
    ||||||||| ||||||||||||||| | ||||| |||||||||||||||||| ||||||| |||||||    
T  31304081 tgttactagtaataccttggagatccgtttgtattgggctggaaaagggacaaagtctcttccaaata 31304014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 31422042 - 31422112
Alignment:
Q  236 tgttactagcaataccttggagatctgcttgtactgggctggaaaagggacacagtctctaccaaataaat 306  Q
    ||||| ||| ||||| ||||||||| | ||||| |||||||||||||||||||||||||| ||||||||||    
T  31422042 tgttagtagtaatactttggagatccgtttgtattgggctggaaaagggacacagtctctcccaaataaat 31422112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 31372939 - 31372875
Alignment:
Q  236 tgttactagcaataccttggagatctgcttgtactgggctggaaaagggacacagtctctaccaa 300  Q
    ||||||||| ||||||||||||||| ||||||| ||||| |||||||||||||||| ||| ||||    
T  31372939 tgttactagtaataccttggagatccgcttgtattgggcgggaaaagggacacagtatctcccaa 31372875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 303
Target Start/End: Complemental strand, 31290234 - 31290167
Alignment:
Q  236 tgttactagcaataccttggagatctgcttgtactgggctggaaaagggacacagtctctaccaaata 303  Q
    ||||| ||| ||||| ||||||||| | ||||| |||||||||||||||||||||||||| |||||||    
T  31290234 tgttagtagtaatactttggagatccgtttgtattgggctggaaaagggacacagtctctcccaaata 31290167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 32114520 - 32114457
Alignment:
Q  91 aagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatcaaa 154  Q
    ||||||||||| ||||||||||||||| |||||||||| | |||| || |||||||||||||||    
T  32114520 aagaatagtccttacatttcattaaatatttttaaaattctcacactttatctctgttatcaaa 32114457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 3624967 - 3624925
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaat 128  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  3624967 ctttgaagaatagtccctacatttcaataaatgtttttaaaat 3624925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 10709475 - 10709555
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| ||| |||  ||||||||  |||  ||||||||||||||| ||||||||| ||||||||||||||||||    
T  10709475 ggttaaatatgtttttggtctttagattttgcgt--gat--tttgaagaatagtccttacatttcaataaatgtttttaaaatcc 10709555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 101 - 204
Target Start/End: Complemental strand, 2606695 - 2606591
Alignment:
Q  101 cctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagt 199  Q
    |||||||||||||||||||||||||||| | || |||| ||||| | |||| |||||||||  || |||||||||| ||||| |||  |||||||  |||    
T  2606695 cctacatttcattaaatgtttttaaaattctcatattttatctccgctatcaaaattagtccatgctgttaattctttaacgaaatgctgatgtggcagt 2606596  T
Q  200 tagtg 204  Q
    |||||    
T  2606595 tagtg 2606591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 154
Target Start/End: Original strand, 32860814 - 32860918
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||||||||||| | |||  ||||||||     |||||||| |||||||  || |||||||||||||||||||||||||  |||||| |||||     
T  32860814 ggttaaatatgtttttagcctttatattttgcgt----ccctttgaaaaatagtcgttatatttcattaaatgtttttaaaatcctaacattttatctcc 32860909  T
Q  146 gttatcaaa 154  Q
    || ||||||    
T  32860910 gtgatcaaa 32860918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 1804273 - 1804311
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  1804273 agaatagtccctacatttcaataaatgtttttaaaatcc 1804311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 1804711 - 1804673
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  1804711 agaatagtccctacatttcaataaatgtttttaaaatcc 1804673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 2036652 - 2036594
Alignment:
Q  91 aagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtta 149  Q
    ||||||||||||||||||||| | ||||||||||||||||  | |||| ||||||||||    
T  2036652 aagaatagtccctacatttcaattaatgtttttaaaatccctatattttatctctgtta 2036594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 3854587 - 3854508
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| |||||||  ||||  ||||| ||||||||||||||||||| | ||||||||||||||||    
T  3854587 ggttaaatatgtttttggtccctacattttgcg--cgat--tttga-gaatagtccctacatttcaatgaatgtttttaaaatcc 3854508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 6476128 - 6476166
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  6476128 agaatagtccctacatttcaataaatgtttttaaaatcc 6476166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 6476566 - 6476528
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  6476566 agaatagtccctacatttcaataaatgtttttaaaatcc 6476528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 11451235 - 11451197
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  11451235 agaatagtccctacatttcaataaatgtttttaaaatcc 11451197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 23222953 - 23222865
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacattt 138  Q
    ||||||||||||||||||||| ||| |||||||  | |  |||| || |||||||| ||||||||| || ||||||||||||||| |||||||    
T  23222953 ggttaaatatgtttttagtccctacattttgcg--caa--ctttaaataatagtccttacatttcaatatatgtttttaaaatcctcacattt 23222865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 27377690 - 27377728
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  27377690 agaatagtccctacatttcaataaatgtttttaaaatcc 27377728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 138
Target Start/End: Original strand, 39096565 - 39096611
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatccacacattt 138  Q
    |||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  39096565 agaatagtccttacatttcaataaatgtttttaaaatccatacattt 39096611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 39947176 - 39947096
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| ||||| ||  ||  ||||||| |||||||| ||||||||| ||||||||||||||||||    
T  39947176 ggttaaatatgtttttggtccctacattttgagt--ga--ctttgaacaatagtccttacatttcaataaatgtttttaaaatcc 39947096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 23221870 - 23221914
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||||    
T  23221870 ctttgaagaatagtacctacatttcaataaatgtttttaatatcc 23221914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 39945878 - 39945922
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||    
T  39945878 ctttgaacaatagtccttacatttcaataaatgtttttaaaatcc 39945922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 31317326 - 31317267
Alignment:
Q  229 atgttgatgttactagcaataccttggagatctgcttgtactgggctggaaaagggacac 288  Q
    |||||| ||||||||| ||||||||||||||| ||||  | |||||||||||| ||||||    
T  31317326 atgttgttgttactagtaataccttggagatccgcttacattgggctggaaaaaggacac 31317267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 32861186 - 32861147
Alignment:
Q  166 tgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  32861186 tgttaattctctaacggaatattgatgtggcagttagtgg 32861147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 2035649 - 2035707
Alignment:
Q  91 aagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtta 149  Q
    ||||||| ||||||||||| | ||||||||||||||||||  |||||| ||||| ||||    
T  2035649 aagaataatccctacattttaataaatgtttttaaaatccctacattttatctccgtta 2035707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 81
Target Start/End: Complemental strand, 2606729 - 2606695
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttc 81  Q
    |||||||||||||||||||||||| ||||||||||    
T  2606729 gttaaatatgtttttagtccttacattttgcgttc 2606695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 12090174 - 12090136
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  12090174 agaatagtccctacatttcaatgaatgtttttaaaatcc 12090136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 26525984 - 26525905
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| |||||||  ||||  |||||  ||||||||||| |||||| ||||||||||||||||||    
T  26525984 ggttaaatatgtttttggtccctacattttgcg--cgat--tttgat-aatagtccctatatttcaataaatgtttttaaaatcc 26525905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 34037850 - 34037888
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  34037850 agaatagtccctacatttcaatgaatgtttttaaaatcc 34037888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 128
Target Start/End: Original strand, 18105753 - 18105794
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaat 128  Q
    ||||||||||| ||||||||||||| |||| |||||||||||    
T  18105753 tttgaagaatattccctacatttcaataaaggtttttaaaat 18105794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 31383373 - 31383328
Alignment:
Q  246 aataccttggagatctgcttgtactgggctggaaaagggacacagt 291  Q
    ||||| ||||||||||||||||| ||||| ||||||||||| ||||    
T  31383373 aatacattggagatctgcttgtattgggcgggaaaagggacgcagt 31383328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 24093365 - 24093409
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||| |||||||| | ||||||| ||||||||||||||||||    
T  24093365 ctttgaaaaatagtccttgcatttcaataaatgtttttaaaatcc 24093409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 32861094 - 32861050
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||| |||||||| || |||||| ||||||||||||||||||    
T  32861094 ctttgaaaaatagtccttatatttcaataaatgtttttaaaatcc 32861050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 44934729 - 44934693
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  44934729 aatagtccttacatttcaataaatgtttttaaaatcc 44934693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 4e-35; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 26997959 - 26997803
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||| ||||| |||||||| |     ||||||||||||||| ||||||||||||| | |||||||||||| ||||||| |||||     
T  26997959 ggttaaatatgtttttagttcttacattttgcgtcca----tttgaagaatagtccatacatttcattaattatttttaaaatcctcacattttatctcc 26997864  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| ||||||||| ||| ||||||||||||||||||||  ||||||| ||||||||||    
T  26997863 gttatcaaaattagtccctgctgttaattctctaacggaatgctgatgtggtagttagtgg 26997803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 12489265 - 12489384
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | ||||| |||| ||||||| ||||||||||||| ||||||||||||||||||||    
T  12489265 tttgaagaatagtccctacatttcattaaatatttttaaaatcctcgcattttatctttgttatcaaaattagtctctgctgttaattctctaacggaat 12489364  T
Q  186 attgatgtgctagttagtgg 205  Q
      ||| ||| ||||||||||    
T  12489365 ggtgacgtggtagttagtgg 12489384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 13315202 - 13315358
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||| |||||||  |     ||| |||||||||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  13315202 ggttaaatatgtttttagtccttacattttgcgccca----tttaaagaatagtccctacatttcattaaatgtttttaaaatcatcacattttatctct 13315297  T
Q  146 gttatcaaa-ttagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    ||||||||| |||| |  |  |||||||||||||||||||| ||||||||  |||||||||    
T  13315298 gttatcaaaattagccattcctgttaattctctaacggaatgttgatgtggcagttagtgg 13315358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 17915596 - 17915441
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||| ||||| | ||    |||||||||||| ||| ||||||| ||||||||||||| |||||| ||||||| ||||||    
T  17915596 ggttaaatatgtttttagtccttacattttgtgctc----ctttgaagaata-tccttacattttattaaatgttttttaaatcctcacattttatctct 17915502  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| |||||||||| || |||||||||| |||| |||||||||||||  |||||||||    
T  17915501 gttatcaaaattagtctttgctgttaattctttaacagaatattgatgtggcagttagtgg 17915441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 47 - 205
Target Start/End: Original strand, 6297463 - 6297618
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctg 146  Q
    ||||||||||| |||||||||||| |||||||  |    |||||||||||||| |||||||||||||||||||||||||||||| |||||||  ||||||    
T  6297463 gttaaatatgtctttagtccttacattttgcgccc----ctttgaagaatagttcctacatttcattaaatgtttttaaaatcctcacattttctctctg 6297558  T
Q  147 ttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    ||||| |||||||||  || ||||||||||| ||||||||  |||||||  |||||||||    
T  6297559 ttatcaaaattagtccttgctgttaattctccaacggaatgctgatgtggcagttagtgg 6297618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 194
Target Start/End: Complemental strand, 6298125 - 6297980
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||| |||||||||| ||||| |||||| |||   ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| || ||     
T  6298125 ggttaaatgtgtttttagtgcttacattttgc-ttc---cctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacattttatttcc 6298030  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    |||||| ||||||||| ||  ||||||||||||||||||||  |||||||    
T  6298029 gttatcaaaattagtccctattgttaattctctaacggaatgctgatgtg 6297980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 9800039 - 9800195
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||  |||||||       |||||||||||| ||| ||||||| |||||||||||||||||||| ||||||| |||||     
T  9800039 ggttaaatatgtttttagtccttagattttgcgcct----ctttgaagaataatccttacattttattaaatgtttttaaaatcctcacatttcatctcc 9800134  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| |||||||||| || ||||||||||||||||||||  |||||||  |||||||||    
T  9800135 gttatcaaaattagtctttgctgttaattctctaacggaatgctgatgtggcagttagtgg 9800195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 16662168 - 16662324
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||| |||| ||||||| ||||| ||||||| ||    ||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||    
T  16662168 ggttaattatgattttagttcttacattttgcgctc----ctttgaagaatagtccctacatttcattaaatgtttttaaaattctcacattttatctct 16662263  T
Q  146 gtta-tcaaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||| | ||||||||| ||  |||||||||||||||| |||  |||||||  |||||||||    
T  16662264 gttattaaaattagtccctactgttaattctctaacgaaatgctgatgtggcagttagtgg 16662324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 49 - 194
Target Start/End: Complemental strand, 16662558 - 16662417
Alignment:
Q  49 taaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtt 148  Q
    |||||||||||||||||||||| ||||||| ||     ||||||||||||| |||||||||||||||||||||||||||| | || |||| ||||| |||    
T  16662558 taaatatgtttttagtccttacattttgcgctct----tttgaagaatagttcctacatttcattaaatgtttttaaaattctcatattt-atctccgtt 16662464  T
Q  149 atc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
     || |||||| || ||| |||||||||||||||||||| ||||||||    
T  16662463 ctcaaaattaatccctgttgttaattctctaacggaatgttgatgtg 16662417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 86 - 201
Target Start/End: Complemental strand, 6297916 - 6297800
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaa 184  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||| |||||| |||||||||  || |||| |||||||||  |||    
T  6297916 ctttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacattttatctccgttatcaaaattagtccttgttgttgattctctaatagaa 6297817  T
Q  185 tattgatgtgctagtta 201  Q
    | |||||||| ||||||    
T  6297816 tgttgatgtggtagtta 6297800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 10047479 - 10047623
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||| ||||||| |||||||  |     |||||||||||||||||||||| ||||||||||||||||||| | ||||||| |||||     
T  10047479 ggttaaatatgtttttaatccttacattttgcgccct----tttgaagaatagtccctacatt-cattaaatgtttttaaaattctcacattttatctcc 10047573  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    |||||| |||||||||  || ||||||||||||||||||| | |||||||    
T  10047574 gttatcaaaattagtccatgctgttaattctctaacggaacactgatgtg 10047623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 154
Target Start/End: Original strand, 17914197 - 17914301
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||| |||| |||| ||||||||      |||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  17914197 ggttaaatatgttttaagtctttacattttgcgtct----ctttgaagaatagtccctacattttattaaatgtttttaaaatcctcacattttatctct 17914292  T
Q  146 gttatcaaa 154  Q
    |||||||||    
T  17914293 gttatcaaa 17914301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 49 - 205
Target Start/End: Complemental strand, 26243482 - 26243329
Alignment:
Q  49 taaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtt 148  Q
    |||||||||||||||||||||  ||||||| ||    ||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| |||||  ||    
T  26243482 taaatatgtttttagtccttatattttgcgctc----ctttgaagaatagtctctatatttcattaaatgtttttaaaatcctcacattttatctccatt 26243387  T
Q  149 atcaaa-ttagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| || |||   | ||||||||||||||  |||| ||||||||  |||||||||    
T  26243386 atcaaaatttgtccacggtgttaattctctaattgaatgttgatgtgacagttagtgg 26243329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 9800398 - 9800288
Alignment:
Q  85 cctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacgga 183  Q
    ||||||||||||||||| || |||||||||||||||||||||||||  |||||| ||||  |||||| |||||||| | || ||||||||||||||| ||    
T  9800398 cctttgaagaatagtccatatatttcattaaatgtttttaaaatccttacattttatcttcgttatcaaaattagtttatgctgttaattctctaacaga 9800299  T
Q  184 atattgatgtg 194  Q
    || ||||||||    
T  9800298 atgttgatgtg 9800288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 44024262 - 44024380
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    ||||||||||||||| |||||||||  ||||||||||||||||  ||||||| ||| | |||||| |||||||||  || ||||||||||||||||||||    
T  44024262 tttgaagaatagtccatacatttcaccaaatgtttttaaaatcatcacattttatccccgttatcaaaattagtcaatgttgttaattctctaacggaat 44024361  T
Q  186 attgatgtgctagttagtg 204  Q
     ||||||||  ||||||||    
T  44024362 gttgatgtgacagttagtg 44024380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 85 - 205
Target Start/End: Complemental strand, 21006177 - 21006056
Alignment:
Q  85 cctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacgga 183  Q
    |||||||| |||||||||||||||| |||||||||||||||||||| ||||||| ||||| |||||| |||||  || ||| |||||||||||||| | |    
T  21006177 cctttgaaaaatagtccctacattttattaaatgtttttaaaatcctcacattttatctccgttatcaaaattgatccctgctgttaattctctaatgaa 21006078  T
Q  184 atattgatgtgctagttagtgg 205  Q
    ||  |||||||  |||||||||    
T  21006077 atgctgatgtggcagttagtgg 21006056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 169
Target Start/End: Original strand, 26720323 - 26720441
Alignment:
Q  48 ttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgt 147  Q
    |||||||| |||||||||| ||| ||||||| ||    |||||||||||||||||||||||||||||||| ||||||||||||  ||||||  |||||||    
T  26720323 ttaaatatatttttagtccctacattttgcgctc----ctttgaagaatagtccctacatttcattaaatatttttaaaatccctacattttttctctgt 26720418  T
Q  148 tatca-aattagtctctgatgtt 169  Q
    || || ||||| |||||| ||||    
T  26720419 taacacaattaatctctgctgtt 26720441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 12489616 - 12489517
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||| |||||||| || |    ||||||||||||| ||||||||||||| ||||||||||||||  |||||| ||||||    
T  12489616 ggttaaatatgtttttagtccttacattttgcgt-cgtta---tgaagaatagtccttacatttcattaa-tgtttttaaaatccttacattttatctct 12489522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 44024397 - 44024478
Alignment:
Q  45 aggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||| |||||||| ||||||||  ||  ||||||| |||||||| ||||||||| ||||| ||||||||||||    
T  44024397 aggttaaatatgtttttggtccttacattttgcgt--ga--ctttgaaaaatagtccttacatttcaataaatatttttaaaatcc 44024478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 29917105 - 29917184
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||  ||| |||||||||||  ||||  ||||| ||||||||||||||||||| ||||||||||||||||||    
T  29917105 ggttaaatatgtttttgatccctacgttttgcg--cgat--tttga-gaatagtccctacatttcaataaatgtttttaaaatcc 29917184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 44148578 - 44148665
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacattt 138  Q
    |||||||||||||||||||| ||| |||| || ||     ||||||||||||||||||||||| | |||| ||||||||||||| |||||||    
T  44148578 gttaaatatgtttttagtccctacattttacgctct----tttgaagaatagtccctacattttaataaacgtttttaaaatcctcacattt 44148665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 203
Target Start/End: Original strand, 39234889 - 39234990
Alignment:
Q  103 tacatttcattaaatgtttttaaaatccacacatttgatctctgttatcaaa-ttagtctctgatgttaattctctaacggaatattgatgtgctagtta 201  Q
    ||||||| ||||||| |||| ||||| | ||||||| ||||| ||||||||| ||||||  || ||||||||||||||||||||  |||||||  |||||    
T  39234889 tacattttattaaatattttaaaaattctcacattttatctcagttatcaaaattagtcaatgctgttaattctctaacggaatgctgatgtgacagtta 39234988  T
Q  202 gt 203  Q
    ||    
T  39234989 gt 39234990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 154
Target Start/End: Complemental strand, 7344947 - 7344842
Alignment:
Q  45 aggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctc 144  Q
    |||||| ||||||||||||||||||| ||||| |  |    |||||||||||| ||| ||||||| |||| ||||||||||||||| || |||| || ||    
T  7344947 aggttatatatgtttttagtccttacattttgtgccc----ctttgaagaataatccatacattttattatatgtttttaaaatcctcatattttatgtc 7344852  T
Q  145 tgttatcaaa 154  Q
     |||||||||    
T  7344851 cgttatcaaa 7344842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 21006040 - 21005959
Alignment:
Q  45 aggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||| |||| ||| ||||||||      ||||||| |||||||| ||||||||| ||||||||||||||||||    
T  21006040 aggttaaatatgtttttggtccctacattttgcgtgg----ctttgaaaaatagtccttacatttcaataaatgtttttaaaatcc 21005959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 21005779 - 21005878
Alignment:
Q  107 tttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    ||||||||||| |||||||||||  || |||| ||||| |||||| |||||| ||| |  |||||||||||||||| ||| ||||||||  |||||||||    
T  21005779 tttcattaaatttttttaaaatcttcatattttatctccgttatcaaaattattctttcctgttaattctctaacgaaatgttgatgtggcagttagtgg 21005878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 4624533 - 4624613
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||||||  |||||| |  ||  |||||||||||||||  ||||||||| ||||||||||||||||||    
T  4624533 ggttaaatatgtttttggtccttatattttgcat--ga--ctttgaagaatagtctttacatttcaataaatgtttttaaaatcc 4624613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 10047934 - 10047832
Alignment:
Q  84 tcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacgg 182  Q
    |||||||||||||||||  || || ||||||||| ||||||||||   || |||| ||||| |||||| |||||||||| |||||| ||||||  |||||    
T  10047934 tcctttgaagaatagtctttatatatcattaaatatttttaaaattttcatattttatctccgttatcaaaattagtctttgatgtcaattctacaacgg 10047835  T
Q  183 aat 185  Q
    |||    
T  10047834 aat 10047832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 40304684 - 40304790
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||| |||||||||| ||| ||||||  ||    ||||||  |||||||| ||||||| | ||||| |||||||||||| ||||||| || |||    
T  40304684 ggttaaatatatttttagtccctacattttgcactc----ctttgataaatagtccatacatttaagtaaatatttttaaaatcctcacattttatatct 40304779  T
Q  146 gttatcaaatt 156  Q
    |||| ||||||    
T  40304780 gttaccaaatt 40304790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 11089384 - 11089228
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacaca-tttgatctc 144  Q
    |||||| |||||||||||| ||||  |||    |||| |||||| ||||||| ||  |||||||| |||||| |||||||||||| || | ||| | |||    
T  11089384 ggttaagtatgtttttagttcttagattt----ttcgctcctttaaagaataatcattacatttcgttaaatatttttaaaatcctcatatttttagctc 11089289  T
Q  145 tgtta-tcaaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    ||||| | |||||||| |||| |||||||| ||||||| ||| ||||||||  |||||||||    
T  11089288 tgttattaaaattagt-tctgctgttaattatctaacgaaatgttgatgtgacagttagtgg 11089228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 36155307 - 36155351
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||| |||||||||||||||| | ||||||||||||||||||    
T  36155307 ctttgaataatagtccctacattttaataaatgtttttaaaatcc 36155351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 20682744 - 20682787
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatc 129  Q
    |||||||||||||||| ||||||| | |||||||||||||||||    
T  20682744 ctttgaagaatagtccttacattttaataaatgtttttaaaatc 20682787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 44803653 - 44803565
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacattt 138  Q
    |||||||||||| |||||||| ||| ||||||| ||    ||||||  |||||||||||||||| | |||| ||||||||||| | |||||||    
T  44803653 ggttaaatatgtgtttagtccctacattttgcgctc----ctttgataaatagtccctacatttaagtaaaagtttttaaaattctcacattt 44803565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 29917586 - 29917548
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  29917586 agaatagtccttacatttcaataaatgtttttaaaatcc 29917548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 4694478 - 4694442
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| | ||||||||||||||||||    
T  4694478 aatagtccctacatttaagtaaatgtttttaaaatcc 4694442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 22601540 - 22601576
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaat 128  Q
    |||||||||||||||||| | ||||||||||||||||    
T  22601540 agaatagtccctacatttaaataaatgtttttaaaat 22601576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 24846004 - 24846040
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaat 128  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  24846004 agaatagtccttacatttcaataaatgtttttaaaat 24846040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 12389461 - 12389565
Alignment:
Q  203 tggttagaaagccgtaagaaagttcaatgttgatgttactagcaataccttggagatctgcttgtactgggctggaaaagggac-acagtctctaccaaa 301  Q
    |||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| |||||||||||| | |||||||||||||    
T  12389461 tggtaagaaagccgtaagaaagttcaatgttgatgttactagtgataccttggagatctgcttgtattggggtggaaaagggacaaaagtctctaccaaa 12389560  T
Q  302 taaat 306  Q
    |||||    
T  12389561 taaat 12389565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 204
Target Start/End: Complemental strand, 6751444 - 6751288
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||||||||||||| |||| |||||   ||   ||||| ||||| ||||| ||||||||||||||| |||||||||||| ||||||| |||| |    
T  6751444 ggttaaatatgtttttagtcattacattttggcgtc---cctttaaagaaaagtccttacatttcattaaatttttttaaaatcctcacattttatcttt 6751348  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtg 204  Q
    |||||| ||||||||||||| |||||||||||||| ||||| ||||||||  ||||||||    
T  6751347 gttatcaaaattagtctctgctgttaattctctaatggaatgttgatgtgacagttagtg 6751288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 204
Target Start/End: Original strand, 5172745 - 5172899
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||| ||||| ||||||| ||     |||||||||||||| |||||||||||||||||||||||||||||  |||||| ||||      
T  5172745 ggttaaatatgtttttagttcttacattttgcgctca----tttgaagaatagtctctacatttcattaaatgtttttaaaatccttacattttatctac 5172840  T
Q  146 gttatcaaa-ttagtctctgatgttaattctctaacggaatattgatgtgctagttagtg 204  Q
    ||||||||| ||||||  || ||||||||||||||  |||| |||||||| |||||||||    
T  5172841 gttatcaaatttagtccttgttgttaattctctaatagaatgttgatgtg-tagttagtg 5172899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 9880484 - 9880610
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||| |||||| | |    |||||||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||      
T  9880484 ggttaaatatgtttttagtccttacattttgcatcc----ctttgaagaaaagtctctacatttcattaaatgtttttaaaatcctcacattttatcttc 9880579  T
Q  146 gttatc-aaattagtctctgatgttaattct 175  Q
    |||||| ||||||||| ||| ||||||||||    
T  9880580 gttatcaaaattagtcactgttgttaattct 9880610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 19895400 - 19895545
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||| ||||  | |||    ||||||||||||||| ||||||| ||||||||||||||||| || ||||||| |||||     
T  19895400 ggttaaatatgtttttagtccttacattttatgctcg----tttgaagaatagtccatacatttaattaaatgtttttaaaaccctcacattttatctcc 19895495  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    |||||| |||||||||| |  |||||||||| |||||||||  |||||||    
T  19895496 gttatcaaaattagtctatactgttaattctttaacggaatgctgatgtg 19895545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 46 - 194
Target Start/End: Complemental strand, 31436473 - 31436328
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||| ||||||||||||| ||||| || |     |||||||||||||| ||| |||| ||||||||||||||||||   ||||||| |||||     
T  31436473 ggttaaatatgattttagtccttacattttgtgtcct----tttgaagaatagtcactatattttattaaatgtttttaaaattatcacattttatctcc 31436378  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    |||||| ||||||||||||| ||||||||||||||||||||  |||||||    
T  31436377 gttatcaaaattagtctctgctgttaattctctaacggaatgatgatgtg 31436328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 3591427 - 3591271
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||| |||||||||||||| ||||||| ||     ||||||||||||||| ||||||| |||||||||||||||||||| ||||||| |||||     
T  3591427 ggttaaatatatttttagtccttacattttgcgctca----tttgaagaatagtccatacattttattaaatgtttttaaaatcctcacattttatctcc 3591332  T
Q  146 gttat-caaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
     ||||  ||||||||| ||| ||| |||| |||||||||||  |||||||  |||||||||    
T  3591331 attataaaaattagtccctgctgtaaattatctaacggaatcctgatgtggcagttagtgg 3591271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 9880880 - 9880744
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||| | ||||| ||||||| ||     |||||||||||||  ||| |||| |||||||||||||||||| | ||||||| ||||||    
T  9880880 ggttaaatatgtttttaattcttacattttgcgctca----tttgaagaatagtttctatattttattaaatgtttttaaaattctcacattttatctct 9880785  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    |||||| ||||||||| ||| ||||||||||||||||||||    
T  9880784 gttatcaaaattagtccctgctgttaattctctaacggaat 9880744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 194
Target Start/End: Original strand, 50359165 - 50359269
Alignment:
Q  90 gaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaatatt 188  Q
    |||||||||||||||||||||||||||||||||| |||||  ||||||| || || |||||| ||||||| ||||| |||||||||||||||||||| ||    
T  50359165 gaagaatagtccctacatttcattaaatgttttttaaatcttcacattttatttccgttatcaaaattag-ctctgctgttaattctctaacggaatgtt 50359263  T
Q  189 gatgtg 194  Q
    ||||||    
T  50359264 gatgtg 50359269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 45 - 185
Target Start/End: Original strand, 5683160 - 5683297
Alignment:
Q  45 aggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctc 144  Q
    |||||||||||||||||| ||||||| ||||||||      ||||||| |||||||||||||||||||||||||| |||||||||| ||||||| ||||     
T  5683160 aggttaaatatgtttttaatccttacattttgcgtct----ctttgaaaaatagtccctacatttcattaaatgtatttaaaatcctcacattttatctt 5683255  T
Q  145 tgttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
      ||||| ||||||||| ||| ||||| ||||||||| ||||    
T  5683256 cattatcaaaattagtccctgctgttatttctctaacagaat 5683297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 86 - 185
Target Start/End: Complemental strand, 18180332 - 18180232
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaa 184  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| || |||| ||||| |||||| |||||||||  || |||||||||||||||||||    
T  18180332 ctttgaagaatagtccatacattttattaaatgtttttaaaatcctcatattttatctccgttatcaaaattagtcagtggtgttaattctctaacggaa 18180233  T
Q  185 t 185  Q
    |    
T  18180232 t 18180232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 87 - 205
Target Start/End: Complemental strand, 5683614 - 5683495
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |  |||| ||||| | |||| ||||||||| ||| |||||||| |||||||||||    
T  5683614 tttgaagaatagtccctacatttcattaaatatttttaaaatcctcgtattttatctccggtatcaaaattagtcactgctgttaattttctaacggaat 5683515  T
Q  186 attgatgtgctagttagtgg 205  Q
     || |||||  |||||||||    
T  5683514 gttaatgtgacagttagtgg 5683495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 203
Target Start/End: Original strand, 47541553 - 47541672
Alignment:
Q  85 cctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacgga 183  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| || |   ||||| |||||| || ||| ||||||||||||||||||    
T  47541553 cctttgaagaatagtccctatatttcattaaatgtttttaaaatcctcacattttatattcattatcaaaattaatccctgttgttaattctctaacgga 47541652  T
Q  184 atattgatgtgctagttagt 203  Q
    ||  |||||||  |||||||    
T  47541653 atgctgatgtggcagttagt 47541672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 19895853 - 19895735
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    |||||||||||||| |||||||| |||||||||||||||||| | || |||| ||||  |||||| |||||||||| || ||||||||||||||| ||||    
T  19895853 tttgaagaatagtctctacattttattaaatgtttttaaaattctcatattttatcttcgttatcaaaattagtctttgttgttaattctctaacagaat 19895754  T
Q  186 attgatgtgctagttagtg 204  Q
     ||||||||  ||||||||    
T  19895753 gttgatgtgacagttagtg 19895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 185
Target Start/End: Complemental strand, 48155368 - 48155233
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctg 146  Q
    |||||||||||||||| ||||||  ||||||| ||    ||||||||||| || |||| ||||||||||||||||||||||||  ||||||| |||| ||    
T  48155368 gttaaatatgtttttaatccttatattttgcgctc----ctttgaagaattgttcctatatttcattaaatgtttttaaaatcttcacattttatctatg 48155273  T
Q  147 ttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    ||||| |||||||||  || |||||||||| |||||||||    
T  48155272 ttatcaaaattagtccttgttgttaattctttaacggaat 48155233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 18179879 - 18180024
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||| ||||||||||||||||| ||||||   |    ||||||| |||||||| || |||||||||| |||||||||||||| ||||||| |||||     
T  18179879 ggttaaacatgtttttagtccttacattttgcaccc----ctttgaaaaatagtccttatatttcattaattgtttttaaaatcctcacattttatctcc 18179974  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    |||||| ||||||||||||  || ||||| |||||||||||  |||||||    
T  18179975 gttatcaaaattagtctctactgctaattttctaacggaatgctgatgtg 18180024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 50359492 - 50359384
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    ||||||||||||||| |  ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| | |||  ||| |||||||||    
T  50359492 tttgaagaatagtccttttatttcattaaatgtttttaaaatcctcacattttatctctgttatcaaaattagtctctgcttttatgtctttaacggaat 50359393  T
Q  186 attgatgtg 194  Q
      |||||||    
T  50359392 gctgatgtg 50359384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 1501071 - 1500991
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||||||| ||  ||||||| ||     ||||||||||||||||||||||||||||||||||||||||||||    
T  1501071 ggttaaatatgtttttagtccctatattttgcgctct----tttgaagaatagtccctacatttcattaaatgtttttaaaatcc 1500991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 205
Target Start/End: Complemental strand, 4288525 - 4288374
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||  |||||||  |    |||||||||||||||||||||||     ||||||||||||||||| ||||||| || |      
T  4288525 ggttaaatatgtttttagtccttatattttgcgccc----ctttgaagaatagtccctacatt-----aaatgtttttaaaatcctcacattttatattc 4288435  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| |||||| ||  || |||||||||| ||||||||| ||||||||  |||||||||    
T  4288434 gttatcaaaattaatccatgctgttaattctttaacggaatgttgatgtgtcagttagtgg 4288374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 48 - 194
Target Start/End: Original strand, 19976166 - 19976309
Alignment:
Q  48 ttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgt 147  Q
    |||||||||||||||||| |||| ||||||| |     |||||||||||||| | ||  ||| |||||||||||||||||||| ||||||| |||||| |    
T  19976166 ttaaatatgtttttagtcgttacattttgcgctt----ctttgaagaatagttcttattttttattaaatgtttttaaaatccccacattttatctctat 19976261  T
Q  148 tatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    |||| |||||| ||  || |||||||| ||||||  ||||||||||||    
T  19976262 tatcaaaattaatccttgttgttaattatctaacaaaatattgatgtg 19976309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 185
Target Start/End: Original strand, 6751083 - 6751183
Alignment:
Q  86 ctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaa 184  Q
    |||||||||||| ||| || ||||||||||||||||| ||||||  | ||||| ||||| |||||| ||||||||| | ||||||||||||||||| |||    
T  6751083 ctttgaagaataatccttatatttcattaaatgttttaaaaatcatcgcattttatctccgttatcaaaattagtccccgatgttaattctctaacagaa 6751182  T
Q  185 t 185  Q
    |    
T  6751183 t 6751183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 205
Target Start/End: Original strand, 48155014 - 48155129
Alignment:
Q  91 aagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaatattg 189  Q
    ||||||||||| ||||||| |||||||||||||||||||| || |||| ||||| | |||| |||||| |||||| | |||| ||| ||||||| | |||    
T  48155014 aagaatagtccttacattttattaaatgtttttaaaatcctcatattttatctccgatatcaaaattaatctctgctcttaagtctgtaacggattgttg 48155113  T
Q  190 atgtgctagttagtgg 205  Q
    |||||  |||||||||    
T  48155114 atgtgacagttagtgg 48155129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 45664687 - 45664775
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacattt 138  Q
    ||||||||||||||||||||| ||| |||| || ||     |||||||||||||| |||||||| | |||||||||||||||||| |||||||    
T  45664687 ggttaaatatgtttttagtccctacattttacgctca----tttgaagaatagtctctacattttaataaatgtttttaaaatccccacattt 45664775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 12869710 - 12869664
Alignment:
Q  84 tcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||    
T  12869710 tcctttaaagaatagtccctacatttcaataaatgtttttaaaatcc 12869664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 36793664 - 36793584
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||||||| ||  ||||||||  ||  ||||||||||||||| |||||||| | ||||||||||||||||||    
T  36793664 ggttaaatatgtttttagtccctatattttgcgt--ga--ctttgaagaatagtctctacattttaataaatgtttttaaaatcc 36793584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 130
Target Start/End: Original strand, 1500100 - 1500139
Alignment:
Q  91 aagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  1500100 aagaatagtccctacatttcattgaatgtttttaaaatcc 1500139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 3591255 - 3591174
Alignment:
Q  45 aggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||| |||| ||| || |||||  ||  ||||||| |||||||| ||||||||| ||||||||||||||||||    
T  3591255 aggttaaatatgtttttggtccctacattgtgcgt--ga--ctttgaaaaatagtccttacatttcaataaatgtttttaaaatcc 3591174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 8997382 - 8997420
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  8997382 agaatagtccctacatttcaataaatgtttttaaaatcc 8997420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 17968037 - 17968116
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| |||||||  ||||  ||||| ||||||||||||||||||| | ||||||||||||||||    
T  17968037 ggttaaatatgtttttggtccctacattttgcg--cgat--tttga-gaatagtccctacatttcaatgaatgtttttaaaatcc 17968116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 32266524 - 32266562
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  32266524 agaatagtccctacatttcaataaatgtttttaaaatcc 32266562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 40124117 - 40124155
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  40124117 agaatagtccctacatttcaataaatgtttttaaaatcc 40124155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 45230650 - 45230571
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| |||||||  ||||  ||||| ||||||||||||||||||| | ||||||||||||||||    
T  45230650 ggttaaatatgtttttggtccctacattttgcg--cgat--tttga-gaatagtccctacatttcaatgaatgtttttaaaatcc 45230571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 47410464 - 47410502
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  47410464 agaatagtccctacatttcaataaatgtttttaaaatcc 47410502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 47410902 - 47410864
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  47410902 agaatagtccctacatttcaataaatgtttttaaaatcc 47410864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 47541851 - 47541769
Alignment:
Q  113 taaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    |||||||||||||||||| ||||||| ||||| |||||| |||||||||  || |||||||| |  |||||||| ||||||||    
T  47541851 taaatgtttttaaaatcctcacattttatctccgttatcaaaattagtccttgttgttaattattaaacggaatgttgatgtg 47541769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 9122726 - 9122764
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  9122726 agaatagtccttacatttcaataaatgtttttaaaatcc 9122764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 9123164 - 9123126
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  9123164 agaatagtctctacatttcaataaatgtttttaaaatcc 9123126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 12868467 - 12868513
Alignment:
Q  84 tcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||| ||||||||| ||||||||||| ||||| ||||||||||||    
T  12868467 tcctttaaagaatagttcctacatttcaataaatatttttaaaatcc 12868513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 32266962 - 32266924
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  32266962 agaataatccctacatttcaataaatgtttttaaaatcc 32266924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 40124555 - 40124517
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  40124555 agaataatccctacatttcaataaatgtttttaaaatcc 40124517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 46802363 - 46802401
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  46802363 agaatagtccctacatttcaataaaagtttttaaaatcc 46802401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 194
Target Start/End: Complemental strand, 42723284 - 42723200
Alignment:
Q  111 attaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    |||||||||||||||||||| ||||||| || || |||| | |||||||| | || |||||||| ||||| |||||  |||||||    
T  42723284 attaaatgtttttaaaatcctcacattttatatccgttagcaaaattagtttatgttgttaattatctaatggaatgctgatgtg 42723200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 46802799 - 46802763
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| | ||||||||||||||||||    
T  46802799 aatagtccctacattttaataaatgtttttaaaatcc 46802763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 205
Target Start/End: Complemental strand, 108210 - 108056
Alignment:
Q  48 ttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgt 147  Q
    ||||||||||||||||||||||| |||||||  |     ||||||||||  | |||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  108210 ttaaatatgtttttagtccttacattttgcgccct----tttgaagaattattcctacatttcattaaatgtttttaaaatcctcacattttatctccgt 108115  T
Q  148 tatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||| ||||||||||||| |||||||||||||| |||||  |||||||  |||||||||    
T  108114 tatcaaaattagtctctgctgttaattctctaatggaatgctgatgtggcagttagtgg 108056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 107722 - 107878
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||||||||||| ||||||  ||||    || |||||||||||||||||||||||||||| ||||| |||||||||||| ||||||| |||||     
T  107722 ggttaaatatgtttttagaccttacactttg----cgctcctttgaagaatagtccctacatttcaataaatatttttaaaatcctcacattttatctcc 107817  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| ||| |||||  || ||||||||||||||||||||  |||||||  |||||||||    
T  107818 gttatcaaaaatagtccatgttgttaattctctaacggaatgctgatgtgacagttagtgg 107878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 107894 - 107974
Alignment:
Q  45 aggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatc 129  Q
    ||||||||||||||||| |||| ||| |||| |||  |||  |||||| |||||||| ||||||||| |||||||||||||||||    
T  107894 aggttaaatatgtttttggtccctacattttccgt--gat--tttgaaaaatagtccttacatttcaataaatgtttttaaaatc 107974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 194
Target Start/End: Complemental strand, 7646071 - 7645927
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctg 146  Q
    |||||||||||||||||||||||| ||||| | ||    |||||||||||||||| ||||||||| |||||||||| ||||| | ||||||| ||||| |    
T  7646071 gttaaatatgtttttagtccttacattttgtgctc----ctttgaagaatagtccttacatttcaataaatgttttaaaaattctcacattttatctccg 7645976  T
Q  147 ttatc-aaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    ||||| ||||||||| ||| |||||||| ||||||||||| ||||||||    
T  7645975 ttatcaaaattagtccctgctgttaattttctaacggaatgttgatgtg 7645927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 17157584 - 17157702
Alignment:
Q  88 ttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaata 186  Q
    |||||||||||||| ||||||||||||||| |||||||||||| ||||||| |||||| ||||| ||||||||| ||| |||||||||||||||| |||     
T  17157584 ttgaagaatagtccatacatttcattaaatatttttaaaatcctcacattttatctctattatcaaaattagtcactgctgttaattctctaacgaaatg 17157683  T
Q  187 ttgatgtgctagttagtgg 205  Q
     ||||||| ||||||||||    
T  17157684 ctgatgtggtagttagtgg 17157702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 88 - 204
Target Start/End: Original strand, 21113067 - 21113184
Alignment:
Q  88 ttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatc-aaattagtctctgatgttaattctctaacggaata 186  Q
    ||||||||||||| ||||||||||||||||||||||||||| | ||||||| |||||  ||||| ||||||||||||| ||||||||||||||||||||     
T  21113067 ttgaagaatagtctctacatttcattaaatgtttttaaaattctcacattttatctcctttatcaaaattagtctctgctgttaattctctaacggaatg 21113166  T
Q  187 ttgatgtgctagttagtg 204  Q
     |||||||  ||||||||    
T  21113167 ctgatgtggcagttagtg 21113184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 5974011 - 5974156
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||  ||||||   |    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||     
T  5974011 ggttaaatatgtttttagtccttatattttgcaccc----ctttgaagaatagtccctacatttcattaaatgtttttaaaatccccacattttatttcc 5974106  T
Q  146 gtta-tcaaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    |||| | |||||||||  || ||||||||||||||||||||  |||||||    
T  5974107 gttattaaaattagtccatgttgttaattctctaacggaatgctgatgtg 5974156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 46 - 194
Target Start/End: Complemental strand, 8710430 - 8710286
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||||||||  ||||||   |    |||||||||||||||| |||||||||||||||||||||||||||| ||||||| || ||     
T  8710430 ggttaaatatgtttttagtccttatattttgcaccc----ctttgaagaatagtccttacatttcattaaatgtttttaaaatccccacattttatttc- 8710336  T
Q  146 gtta-tcaaattagtctctgatgttaattctctaacggaatattgatgtg 194  Q
    |||| | |||||||||  || |||||||||||||||||||| ||||||||    
T  8710335 gttattaaaattagtccatgttgttaattctctaacggaatgttgatgtg 8710286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 182
Target Start/End: Complemental strand, 14713095 - 14712963
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctg 146  Q
    |||||||||||||||| | ||||| ||||||| ||     ||||||||||||||| ||||||||||||||||||||  |||| | || |||| |||||||    
T  14713095 gttaaatatgtttttaattcttacattttgcgctct----tttgaagaatagtccttacatttcattaaatgttttagaaatgctcatattttatctctg 14713000  T
Q  147 ttatc-aaattagtctctgatgttaattctctaacgg 182  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  14712999 ttatcaaaattagtctctgctgttaattctctaacgg 14712963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 211441 - 211529
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacattt 138  Q
    ||||||||||||||||||||||||| |||||||  |    |||||||||||||||| |||||||||||||||| ||||||||||| |||||||    
T  211441 ggttaaatatgtttttagtccttacattttgcgccc----ctttgaagaatagtccgtacatttcattaaatgattttaaaatcctcacattt 211529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 181
Target Start/End: Complemental strand, 211811 - 211679
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaat-gtttttaaaatccacacatttgatctc 144  Q
    ||||||||||||||||| ||||||| |||||||  | ||   ||||||||||||||||||||||||||||||  |||||||||||  ||||||| |||||    
T  211811 ggttaaatatgtttttaatccttacattttgcgc-ctat---ttgaagaatagtccctacatttcattaaatattttttaaaatcttcacattttatctc 211716  T
Q  145 tgttatcaaattagtctctgatgttaattctctaacg 181  Q
      ||||||||||| || ||  ||||||||||||||||    
T  211715 cattatcaaattaatccctactgttaattctctaacg 211679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 154
Target Start/End: Original strand, 4510188 - 4510293
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc-acacatttgatctc 144  Q
    ||||||||||||||||||||||||| |||| ||  | ||   |||||||||||||||||||||||||||||||||||||||||||  || |||| |||||    
T  4510188 ggttaaatatgtttttagtccttacattttacgc-ctat---ttgaagaatagtccctacatttcattaaatgtttttaaaatcctccatattttatctc 4510283  T
Q  145 tgttatcaaa 154  Q
     |||||||||    
T  4510284 ggttatcaaa 4510293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 25932431 - 25932339
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgttatcaaa-ttagtctctgatgttaattctctaacggaat 185  Q
    ||||||| ||||||||| || |||||| ||||||| | ||||||| ||||| ||||||||| ||||||||||  |||||||||||||||||||    
T  25932431 aatagtcactacatttcgttcaatgttattaaaattctcacattttatctccgttatcaaaattagtctctgccgttaattctctaacggaat 25932339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 25932083 - 25932235
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    |||||||||| ||||||||| |||| |||||| |||    |||||||||||||||||| ||||||||||    ||||||||||||   ||||| |||||     
T  25932083 ggttaaatatatttttagtctttacattttgctttc----ctttgaagaatagtccctgcatttcatta----tttttaaaatccttgcattttatctcc 25932174  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtgg 205  Q
    |||||| |||||||||  || | ||| ||||||||||||||  ||||||| | ||||||||    
T  25932175 gttatcaaaattagtccatgctattatttctctaacggaatgctgatgtgttggttagtgg 25932235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 17157923 - 17157856
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaat 117  Q
    ||||||||||||||||||||||||| |||||||  | |  ||||||||||||||||||||||||||||||||    
T  17157923 ggttaaatatgtttttagtccttacattttgcg--cca--ctttgaagaatagtccctacatttcattaaat 17157856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 154
Target Start/End: Original strand, 1869503 - 1869555
Alignment:
Q  102 ctacatttcattaaatgtttttaaaatccacacatttgatctctgttatcaaa 154  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||    
T  1869503 ctacatttcattaaatgtttttaaaatcctcacattttatctccgttatcaaa 1869555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 129
Target Start/End: Complemental strand, 20522209 - 20522167
Alignment:
Q  87 tttgaagaatagtccctacatttcattaaatgtttttaaaatc 129  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  20522209 tttgaagaatagtccctacatttcaataaatgtttttaaaatc 20522167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 34984633 - 34984554
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| |||||||  ||||  ||||| ||||||||||||||||||| ||||||||||||||||||    
T  34984633 ggttaaatatgtttttggtccctacattttgcg--cgat--tttga-gaatagtccctacatttcaataaatgtttttaaaatcc 34984554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 14712829 - 14712910
Alignment:
Q  45 aggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||| |||| ||| ||||||||      ||||||| |||||||| ||||||||| ||||||||||||||||||    
T  14712829 aggttaaatatgtttttggtccctacattttgcgtca----ctttgaaaaatagtccttacatttcaataaatgtttttaaaatcc 14712910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 14257188 - 14257226
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  14257188 agaatagtccctacatttcaataaatgtttttaaaatcc 14257226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 14257626 - 14257588
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  14257626 agaatagtccctacatttcaataaatgtttttaaaatcc 14257588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 20824205 - 20824243
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20824205 agaatagtccctacatttcaataaatgtttttaaaatcc 20824243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 33107450 - 33107371
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||| |||| ||| |||||||  ||||  ||||| ||||||||||||||||||| | ||||||||||||||||    
T  33107450 ggttaaatatgtttttggtccctacattttgcg--cgat--tttga-gaatagtccctacatttcaatgaatgtttttaaaatcc 33107371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 6162776 - 6162698
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||| |||| ||| |||||||  ||||  ||||| |||||||| |||||||||| ||||||||||||||||||    
T  6162776 gttaaatatgtttttggtccctacattttgcg--cgat--tttga-gaatagtctctacatttcaataaatgtttttaaaatcc 6162698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 130
Target Start/End: Complemental strand, 19595698 - 19595659
Alignment:
Q  91 aagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  19595698 aagaatagtccctacatttcaataaatatttttaaaatcc 19595659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 15147759 - 15147797
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  15147759 agaataatccctacatttcaataaatgtttttaaaatcc 15147797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 19579251 - 19579193
Alignment:
Q  91 aagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgtta 149  Q
    |||||||||| || ||||||| ||||||||||||||||||  | |||| ||||||||||    
T  19579251 aagaatagtctctgcatttcaataaatgtttttaaaatccctatattttatctctgtta 19579193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 20824643 - 20824605
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  20824643 agaataatccctacatttcaataaatgtttttaaaatcc 20824605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 34527713 - 34527746
Alignment:
Q  152 aaattagtctctgatgttaattctctaacggaat 185  Q
    ||||||||||||| ||||||||||||||||||||    
T  34527713 aaattagtctctgttgttaattctctaacggaat 34527746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 15148195 - 15148159
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||| |||||| |||||||||||    
T  15148195 aatagtccctacatttcaataaatgattttaaaatcc 15148159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 20521225 - 20521265
Alignment:
Q  90 gaagaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    ||||||||||||||| ||||||  |||||||||||||||||    
T  20521225 gaagaatagtccctatatttcaaaaaatgtttttaaaatcc 20521265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 47 - 204
Target Start/End: Complemental strand, 35281 - 35127
Alignment:
Q  47 gttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctg 146  Q
    |||||||||||||||||||||||| ||||||||     |||||||||||||||| |||||||| ||| |||||||||||||||| ||||||| ||||| |    
T  35281 gttaaatatgtttttagtccttacattttgcgt----ccctttgaagaatagtctctacattttattgaatgtttttaaaatcctcacattttatctcgg 35186  T
Q  147 ttat-caaattagtctctgatgttaattctctaacggaatattgatgtgctagttagtg 204  Q
    ||||  |||||||| | || | |||| |||||||| |||| ||||||||  ||||||||    
T  35185 ttatgaaaattagtttatgctcttaactctctaacagaatgttgatgtgggagttagtg 35127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 34794 - 34925
Alignment:
Q  48 ttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctctgt 147  Q
    ||||||||||||||||||||||  |||||||| | ||   ||||| ||| |||| |||||||||||||||||||||||| | | ||||||| ||||| ||    
T  34794 ttaaatatgtttttagtccttatattttgcgt-ctat---ttgaataatggtccatacatttcattaaatgtttttaaagtactcacattttatctccgt 34889  T
Q  148 tatc-aaattagtctctgatgttaattctctaacgg 182  Q
    |||| ||||||||||||| | |||||| ||||||||    
T  34890 tatcaaaattagtctctgctattaattttctaacgg 34925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0933 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 185
Target Start/End: Original strand, 491 - 627
Alignment:
Q  46 ggttaaatatgtttttagtccttacgttttgcgttcgatcctttgaagaatagtccctacatttcattaaatgtttttaaaatccacacatttgatctct 145  Q
    ||||||||||||||||||| ||||  |||||||    ||| ||||| || | || | ||||||||||||||||||||||||||   ||||||| || | |    
T  491 ggttaaatatgtttttagttcttagattttgcg----atcatttgacgagttgttcttacatttcattaaatgtttttaaaattttcacattttattttt 586  T
Q  146 gttatc-aaattagtctctgatgttaattctctaacggaat 185  Q
    |||||| |||||||||| || ||||| || |||||||||||    
T  587 gttatcaaaattagtctatgttgttatttttctaacggaat 627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 39900 - 39862
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  39900 agaatagtccctacatttcaataaatgtttttaaaatcc 39862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 39462 - 39500
Alignment:
Q  92 agaatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  39462 agaataatccctacatttcaataaatgtttttaaaatcc 39500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Original strand, 29318 - 29354
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  29318 aatagtccttacatttcaataaatgtttttaaaatcc 29354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 130
Target Start/End: Complemental strand, 33040 - 33004
Alignment:
Q  94 aatagtccctacatttcattaaatgtttttaaaatcc 130  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  33040 aatagtccttacatttcaataaatgtttttaaaatcc 33004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University