View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17961_low_21 (Length: 295)
Name: NF17961_low_21
Description: NF17961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17961_low_21 |
 | |
|
| [»] scaffold0004 (2 HSPs) |
| | |
|
| [»] scaffold0303 (1 HSPs) |
| | |
|
| [»] scaffold0097 (1 HSPs) |
| | |
|
| [»] scaffold0031 (1 HSPs) |
| | |
|
| [»] scaffold0047 (1 HSPs) |
| | |
|
| [»] scaffold0882 (1 HSPs) |
| | |
|
| [»] scaffold0766 (1 HSPs) |
| | |
|
| [»] scaffold1744 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 46467893 - 46467617
Alignment:
| Q |
1 |
aagagcacatacttcaaatttaatggtaacataagggggaactatccttgagattttcactaaccg--cttttaaacaggataagctagtaacctttaca |
98 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||||| | |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||| | |
|
|
| T |
46467893 |
aagagcacatacttaaaatttaatggtaacacaagggg-agctatccttaagattttcactaaccaaacttttaaacaggataaactagtaacctttata |
46467795 |
T |
|
| Q |
99 |
aataacgagcactctccaaacaaaacaatcttttgtaggatagtctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaa |
198 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
46467794 |
aataatgagcactctccaaacaaaacaatgctttgtaggatagtctctaaaactaagagatatcacctctcttaaaaccttgagatcgcacccaatacaa |
46467695 |
T |
|
| Q |
199 |
aagaaattacaacaataaaataatacaccaaatgtgtagatataacaaattgaagcacaagtactacaactcaactat |
276 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
46467694 |
aagaaattacaacaataaaataatacatcaaatgtgtagatataacaaattgaagcataagtactacaactcaactat |
46467617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 66 - 276
Target Start/End: Complemental strand, 15890576 - 15890367
Alignment:
| Q |
66 |
gcttttaaacaggataagctagtaacctttacaaataacgagcactctccaaacaaaacaatcttttgtaggatagtctctaaaactaagagatatcacc |
165 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| | |||||||||||| ||||||||||||| |
|
|
| T |
15890576 |
gcttttaattaggataagctagtaacctttacaaataacgagcactctccaaacaaaacagtcctttgtaaaagagtctctaaaaccaagagatatcacc |
15890477 |
T |
|
| Q |
166 |
tctctttaaaccttgggatcgcacccaatacaaa-agaaattacaacaataaaataatacaccaaatgtgtagatataacaaattgaagcacaagtacta |
264 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
15890476 |
tctcttgaaaccttgggatcgcacccaatacaaataagaattacaacaataaaataatacaccaaatgggtagatataacaaattgaagcacaag--cta |
15890379 |
T |
|
| Q |
265 |
caactcaactat |
276 |
Q |
| |
|
|||||||||||| |
|
|
| T |
15890378 |
caactcaactat |
15890367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 46 - 272
Target Start/End: Complemental strand, 8827282 - 8827056
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataacgagcactctccaaacaaaacaatcttttgtaggatagtc |
143 |
Q |
| |
|
||||||||||||||||| || ||||||||| |||| |||||||||| ||||||||| ||||||| ||||||||||||| ||||||||||| | || | |
|
|
| T |
8827282 |
ccttgagattttcactagccaagcttttaaataggagaagctagtaaactttacaaaatacgagcattctccaaacaaaaatatcttttgtagaagagcc |
8827183 |
T |
|
| Q |
144 |
tctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaattacaacaataaaataatacaccaaatgtgtagatataa |
243 |
Q |
| |
|
| |||| | ||||||||||||||||||| ||| ||||| ||||||| |||| | ||||||| |||| |||||||||||||||||||||||||||||||| |
|
|
| T |
8827182 |
tataaacccaagagatatcacctctcttgaaatcttggaatcgcacacaatgc-aaagaaaaaacaataataaaataatacaccaaatgtgtagatataa |
8827084 |
T |
|
| Q |
244 |
caaattgaagcacaagtactacaactcaa |
272 |
Q |
| |
|
|||||||||| | || ||||||||||||| |
|
|
| T |
8827083 |
caaattgaagaataa-tactacaactcaa |
8827056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 151; Significance: 6e-80; HSPs: 2)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 46 - 267
Target Start/End: Original strand, 353764 - 353989
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
353764 |
ccttgagattttcactaacctagcttttaaacaggataagctagtaacctttacaagatagcgagcactctccaaacaaaacaatcctttgtagaagagc |
353863 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga-aattacaacaataaaataatacaccaaatgtgtagatat |
241 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
353864 |
ctctaaacccaagagatatcacctctcttgaaaccttgggatcgcacccaatacaaaatagaattacaataataaagtaatacaccaaatgtgtagatat |
353963 |
T |
|
| Q |
242 |
aacaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
|||||||||||||||||| ||||||| |
|
|
| T |
353964 |
aacaaattgaagcacaagaactacaa |
353989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 46 - 276
Target Start/End: Original strand, 113044 - 113278
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| |||||||||| |||||||||||||| ||||||| | ||| |
|
|
| T |
113044 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttataaataagcgagcactcttcaaacaaaacaatcctttgtagaagagt |
113143 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga-aattacaacaataaaataatacaccaaatgtgtagatat |
241 |
Q |
| |
|
|||| || | ||||||||||||||||||| |||| |||||||| |||||||||||||| | | |||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
113144 |
ctcttaacccaagagatatcacctctcttgaaactttgggatcacacccaatacaaaatagagttacaataataaagtaatacaccaaatgtgtagatat |
113243 |
T |
|
| Q |
242 |
aacaaattgaagcacaagtactacaactcaactat |
276 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||||| |
|
|
| T |
113244 |
aacaaattgacgcacaattactacaactcaactat |
113278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 139; Significance: 9e-73; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 46 - 267
Target Start/End: Complemental strand, 3274344 - 3274119
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
3274344 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaagatagcgagcactctccaaacaaaacaatcctttgtagaagagc |
3274245 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaa-agaaattacaacaataaaataatacaccaaatgtgtagatat |
241 |
Q |
| |
|
||||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||| | |||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
3274244 |
ctctaaacccaagagatatcacctctcttgaaaccttgggatcacacccaatacaaataagaattacaataataaagtaatacaccaaatgtgtagatat |
3274145 |
T |
|
| Q |
242 |
aacaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
|||||||||||||||||| ||||||| |
|
|
| T |
3274144 |
aacaaattgaagcacaagaactacaa |
3274119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 46 - 267
Target Start/End: Complemental strand, 3277754 - 3277529
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
3277754 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaagatagcgagcactctccaaacaaaacaatcctttgtagaagagc |
3277655 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaa-agaaattacaacaataaaataatacaccaaatgtgtagatat |
241 |
Q |
| |
|
||||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||| | |||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
3277654 |
ctctaaacccaagagatatcacctctcttgaaaccttgggatcacacccaatacaaataagaattacaataataaagtaatacaccaaatgtgtagatat |
3277555 |
T |
|
| Q |
242 |
aacaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
|||||||||||||||||| ||||||| |
|
|
| T |
3277554 |
aacaaattgaagcacaagaactacaa |
3277529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 46 - 267
Target Start/End: Complemental strand, 39925712 - 39925489
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
39925712 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaagatagcgagcactctccaaacaaaacaatcctttgtagaagagc |
39925613 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaattacaacaataaaataatacaccaaatgtgtagatata |
242 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
39925612 |
ctctaaacccaagagatatcacctctcttgaaaccttgggatcgcacccaatacaaaa-tagttacaataataaagtaatacaccaaatgtgtagatata |
39925514 |
T |
|
| Q |
243 |
acaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
||||||||||| ||||| ||||||| |
|
|
| T |
39925513 |
acaaattgaagtacaagaactacaa |
39925489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 46 - 267
Target Start/End: Original strand, 5026999 - 5027222
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||| |||||||| ||| | ||||||||||||||||||||||| ||||||| | || |
|
|
| T |
5026999 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaatctttacaagatagcaagcactctccaaacaaaacaatcctttgtagaagagc |
5027098 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaattacaacaataaaataatacaccaaatgtgtagatata |
242 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||| | ||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
5027099 |
ctctaaacctaagagatatcacctctcttgaaaccttgggatcgcacccaatataaaa-tagttataataataaaataatacaccaaatgtgtagatata |
5027197 |
T |
|
| Q |
243 |
acaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
||||||||||| ||||| ||||||| |
|
|
| T |
5027198 |
acaaattgaagtacaagaactacaa |
5027222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 139; Significance: 9e-73; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 46 - 267
Target Start/End: Complemental strand, 16851505 - 16851280
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
16851505 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaagatagcgagcactctccaaacaaaacaatcctttgtagaagagc |
16851406 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaa-agaaattacaacaataaaataatacaccaaatgtgtagatat |
241 |
Q |
| |
|
||||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||| | |||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
16851405 |
ctctaaacccaagagatatcacctctcttgaaaccttgggatcacacccaatacaaataagaattacaataataaagtaatacaccaaatgtgtagatat |
16851306 |
T |
|
| Q |
242 |
aacaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
|||||||||||||||||| ||||||| |
|
|
| T |
16851305 |
aacaaattgaagcacaagaactacaa |
16851280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 82 - 266
Target Start/End: Complemental strand, 17365008 - 17364824
Alignment:
| Q |
82 |
agctagtaacctttacaaataacgagcactctccaaacaaaacaatcttttgtaggatagtctctaaaactaagagatatcacctctctttaaaccttgg |
181 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
17365008 |
agctagtaacctttacaaataacgagcactctccaaacaaaacaatcatttgtagaagagtctctaaacctaagagatatcacctttctttaaaccttgg |
17364909 |
T |
|
| Q |
182 |
gatcgcacccaatacaaaagaaattacaacaataaaataatacaccaaatgtgtagatataacaaattgaagcacaagtactaca |
266 |
Q |
| |
|
|| | | || |||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
17364908 |
gaccaccccaaatacaaaagaaattacaacaataaaatgatacagcaaatgtgtagatataacatattgaagcacaagaactaca |
17364824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 46 - 267
Target Start/End: Complemental strand, 21198540 - 21198314
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||| | ||| |
|
|
| T |
21198540 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaaatatgcgagcactcttcaaacaaaacaatcctttgtagaagagt |
21198441 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga--aattacaacaataaaataatacaccaaatgtgtagata |
240 |
Q |
| |
|
||||||| ||||||||||||||||||| |||| |||||||||||||| |||||||| | | |||||| |||||| ||||||||||||| |||||||| |
|
|
| T |
21198440 |
ctctaaactcaagagatatcacctctcttgaaactttgggatcgcaccctatacaaaataagagttacaataataaagtaatacaccaaatatgtagata |
21198341 |
T |
|
| Q |
241 |
taacaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
||||||||||||||||||| ||||||| |
|
|
| T |
21198340 |
taacaaattgaagcacaagaactacaa |
21198314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 46 - 267
Target Start/End: Original strand, 52986892 - 52987118
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaa-taacgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||||||||||||||||| || |||||||||||||||||||| | | ||||||| | || |
|
|
| T |
52986892 |
ccttgagattttcactaacttagcttttaaacgggataagctagtaacctttacaaaatagcgagcactctccaaacaaaattaccctttgtagaagagc |
52986991 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaa--ttacaacaataaaataatacaccaaatgtgtagata |
240 |
Q |
| |
|
||||||| | |||||| |||||||||||| |||| ||||||| || |||||||||||| || || ||| |||||| |||||||||||||||||||||| |
|
|
| T |
52986992 |
ctctaaacccaagagagatcacctctcttgaaactttgggattgcgcccaatacaaaataagagttgcaataataaagtaatacaccaaatgtgtagata |
52987091 |
T |
|
| Q |
241 |
taacaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
||||||||||||| ||||| ||||||| |
|
|
| T |
52987092 |
taacaaattgaagtacaagaactacaa |
52987118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 138; Significance: 4e-72; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 46 - 267
Target Start/End: Original strand, 14404623 - 14404846
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
14404623 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaagatagcgagcactctccaaacaaaacaatcctttgtagaagagc |
14404722 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaattacaacaataaaataatacaccaaatgtgtagatata |
242 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
14404723 |
ctctaaacccaagagatatcacctctcttgaaaccttgggatcgcacccaatacaaaa-tagttacaataataaagtaatacaccaaatgtgtagatata |
14404821 |
T |
|
| Q |
243 |
acaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
||||||||||| ||||| ||||||| |
|
|
| T |
14404822 |
acaaattgaagtacaagaactacaa |
14404846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 46 - 276
Target Start/End: Original strand, 40665983 - 40666217
Alignment:
| Q |
46 |
ccttgagattttcactaaccg--cttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| ||| |||||| |||||||||||||| ||||||| | || |
|
|
| T |
40665983 |
ccttgagattttcactaacctaacttttaaacgggataagctaataacctttacaaataagcgaacactcttcaaacaaaacaatcatttgtagaagagc |
40666082 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga-aattacaacaataaaataatacaccaaatgtgtagatat |
241 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| | | |||||| |||||| || || ||||||||||||||||| |
|
|
| T |
40666083 |
ctctaaactcaagagatatcacctctcttgaaaccttgggatcacacccaatacaaaatagagttacaataataaagtagtataccaaatgtgtagatat |
40666182 |
T |
|
| Q |
242 |
aacaaattgaagcacaagtactacaactcaactat |
276 |
Q |
| |
|
|| ||||||| |||||| ||||||||||||||||| |
|
|
| T |
40666183 |
aataaattgacgcacaattactacaactcaactat |
40666217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 255
Target Start/End: Complemental strand, 25685948 - 25685758
Alignment:
| Q |
68 |
ttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagtctctaaaactaagagatatcacct |
166 |
Q |
| |
|
||||||||||||||| |||||||||||||||| ||| ||||||| |||||||| ||| ||| ||| ||| | || ||||||| | |||||||||||||| |
|
|
| T |
25685948 |
ttttaaacaggataatctagtaacctttacaagatagcgagcacactccaaacgaaattatcctttatagaaaagcctctaaatccaagagatatcacct |
25685849 |
T |
|
| Q |
167 |
ctctttaaaccttgggatcgcacccaatacaa--aagaaattacaacaa-taaaataatacaccaaatgtgtagatataacaaattgaagca |
255 |
Q |
| |
|
||||| ||| ||||||||| |||| ||| ||| |||||| ||||| || ||||| | |||||||||| |||||||| |||||||||||||| |
|
|
| T |
25685848 |
ctcttgaaatcttgggatcacaccaaatgcaaataagaaa-tacaataattaaaagattacaccaaatatgtagataaaacaaattgaagca |
25685758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 46 - 267
Target Start/End: Complemental strand, 39038638 - 39038413
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||| | || |
|
|
| T |
39038638 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaagatagcgagcactctccaaacaaaacaatcctttgtagaagagc |
39038539 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaa-agaaattacaacaataaaataatacaccaaatgtgtagatat |
241 |
Q |
| |
|
||||||| | ||||||||||||||||||| ||||||||||||| ||||||||||||| | |||||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
39038538 |
ctctaaacccaagagatatcacctctcttgaaaccttgggatcacacccaatacaaataagaattacaataataaagtaatacaccaaatgtgtagatat |
39038439 |
T |
|
| Q |
242 |
aacaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
|||||||||||||| ||| ||||||| |
|
|
| T |
39038438 |
aacaaattgaagcataagaactacaa |
39038413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 186513 - 186565
Alignment:
| Q |
153 |
aagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaat |
205 |
Q |
| |
|
|||| |||||||||||||| |||| |||||||||||||||||||||||||||| |
|
|
| T |
186513 |
aagaaatatcacctctcttgaaactttgggatcgcacccaatacaaaagaaat |
186565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 186377 - 186458
Alignment:
| Q |
46 |
ccttgagattttcactaac--cgcttttaaacaggataagctagt-aacctttac-aaataacgagcactctccaaacaaaa |
123 |
Q |
| |
|
||||||||||||||||||| ||||||| || |||||| ||||| ||||||||| ||||| | |||||||||||||||||| |
|
|
| T |
186377 |
ccttgagattttcactaacttagcttttatacgggataaactagtaaacctttacaaaatagcaagcactctccaaacaaaa |
186458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0303 (Bit Score: 134; Significance: 9e-70; HSPs: 1)
Name: scaffold0303
Description:
Target: scaffold0303; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 46 - 267
Target Start/End: Complemental strand, 21306 - 21083
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||| ||||||| | || |
|
|
| T |
21306 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaagatagctagcactctccaaacaaaacaatcctttgtagaagagc |
21207 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaattacaacaataaaataatacaccaaatgtgtagatata |
242 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
21206 |
ctctaaacccaagagatatcacctctcttgaaaccttgggatcgcacccaatacaaaa-tagttacaataataaagtaatacaccaaatgtgtagatata |
21108 |
T |
|
| Q |
243 |
acaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
||||||||||| ||||| ||||||| |
|
|
| T |
21107 |
acaaattgaagtacaagaactacaa |
21083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 134; Significance: 9e-70; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 46 - 276
Target Start/End: Complemental strand, 37439909 - 37439674
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||| ||||||| | ||| |
|
|
| T |
37439909 |
ccttgagattttcactaacctagcttttaaacaggataagctagtaacctttacaaataagcgagcactcttcaaacaaaataatcctttgtagaagagt |
37439810 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga--aattacaacaataaaataatacaccaaatgtgtagata |
240 |
Q |
| |
|
||||||| | ||||||||||||||||||| ||| |||||||||||| |||||||||| | | |||||| |||||| ||||||||||||||||||||| |
|
|
| T |
37439809 |
ctctaaacccaagagatatcacctctcttgaaaatttgggatcgcacacaatacaaaataagagttacaataataaagcaatacaccaaatgtgtagata |
37439710 |
T |
|
| Q |
241 |
taacaaattgaagcacaagtactacaactcaactat |
276 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
37439709 |
taacaaattcaagcacaactactacaactcaactat |
37439674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 67 - 252
Target Start/End: Original strand, 54001424 - 54001610
Alignment:
| Q |
67 |
cttttaaacaggataagctagtaacctttacaaataacgagcactctccaaacaaaacaatcttttgtaggatagtctctaaaactaagagatatcacct |
166 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||||||||||| |||||||||||||||||| ||||||| | | | |||||||| |||||||||||| | |
|
|
| T |
54001424 |
cttttaaataggataagctaataacctttccaaataacgagcattctccaaacaaaacaatcatttgtagaagactttctaaaaccaagagatatcacat |
54001523 |
T |
|
| Q |
167 |
ctctttaaaccttgggatcgcacccaatacaaaagaaattacaacaa--taaaataatacaccaaatgtgtagatataacaaattgaa |
252 |
Q |
| |
|
||| | ||||||| ||||||||||||||| ||| ||| || ||||| |||| | |||||||||| |||||||||||||||||||| |
|
|
| T |
54001524 |
ctcatggaaccttgagatcgcacccaataccaaataaa-tataacaatttaaatgattacaccaaatatgtagatataacaaattgaa |
54001610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 199
Target Start/End: Original strand, 39072738 - 39072789
Alignment:
| Q |
148 |
aaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaa |
199 |
Q |
| |
|
|||| |||||||||||||||| || |||| ||||||||||| |||||||||| |
|
|
| T |
39072738 |
aaaccaagagatatcacctcttttgaaactttgggatcgcatccaatacaaa |
39072789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0097 (Bit Score: 129; Significance: 8e-67; HSPs: 1)
Name: scaffold0097
Description:
Target: scaffold0097; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 46 - 267
Target Start/End: Original strand, 30832 - 31058
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| | ||| |
|
|
| T |
30832 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaaataagcgagcactcttcaaacaaaacaatcctttgtaaaagagt |
30931 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga--aattacaacaataaaataatacaccaaatgtgtagata |
240 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||| ||||||||||||||||||||||| | | |||||| |||||| ||||||||||||| | |||||| |
|
|
| T |
30932 |
ctctaaacccaagagatatcacctctcttgaaactttgggatcgcacccaatacaaaataagagttacaataataaagtaatacaccaaatatatagata |
31031 |
T |
|
| Q |
241 |
taacaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
|||||||||||| |||||||||||||| |
|
|
| T |
31032 |
taacaaattgaaacacaagtactacaa |
31058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 129; Significance: 8e-67; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 46 - 267
Target Start/End: Original strand, 20727003 - 20727229
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| | ||| |
|
|
| T |
20727003 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaaataagcgagcactcttcaaacaaaacaatcctttgtaaaagagt |
20727102 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga--aattacaacaataaaataatacaccaaatgtgtagata |
240 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||| ||||||||||||||||||||||| | | |||||| |||||| ||||||||||||| | |||||| |
|
|
| T |
20727103 |
ctctaaacccaagagatatcacctctcttgaaactttgggatcgcacccaatacaaaataagagttacaataataaagtaatacaccaaatatatagata |
20727202 |
T |
|
| Q |
241 |
taacaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
|||||||||||| |||||||||||||| |
|
|
| T |
20727203 |
taacaaattgaaacacaagtactacaa |
20727229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 76 - 267
Target Start/End: Complemental strand, 24780260 - 24780066
Alignment:
| Q |
76 |
aggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagtctctaaaactaagagatatcacctctctttaa |
174 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||||| | || ||||||| ||||||||||||||||||| | |
|
|
| T |
24780260 |
aggataagctagtaacctttacaagatagcgaacactctccaaacaaaacaatcatttgtagaagagcctctaaactcaagagatatcacctctcttgat |
24780161 |
T |
|
| Q |
175 |
accttgggatcgcacccaatacaaaaga--aattacaacaataaaataatacaccaaatgtgtagatataacaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
|| ||||||||||||||||||||||| | | |||||| |||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| |
|
|
| T |
24780160 |
actttgggatcgcacccaatacaaaataagagttacaataataaagtaatacaccaaatgtgtagatataacaaattaaagcacaaaaactacaa |
24780066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 66 - 275
Target Start/End: Complemental strand, 11023572 - 11023360
Alignment:
| Q |
66 |
gcttttaaacaggataagctagtaacctttacaaataacgagcactctccaaacaaaacaatcttttgtaggatagtctctaaaactaagagatatcacc |
165 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||| | |||||||||||| |||| |||| || |
|
|
| T |
11023572 |
gcttttaaggaggataagctagtaacatttacaaataatgagcactcttcaaacaaaacaattctttgtaaaagagtctctaaaaccaagatatataact |
11023473 |
T |
|
| Q |
166 |
tctctttaaaccttgggat--cgcacccaatacaaa-agaaattacaacaataaaataatacaccaaatgtgtagatataacaaattgaagcacaagtac |
262 |
Q |
| |
|
|||||| |||||||||||| | ||||||||||||| | | |||||| || | |||||||| ||||| | ||||||||||||||||||||| |||||| |
|
|
| T |
11023472 |
tctcttgaaaccttgggatcacacacccaatacaaataagatttacaataaggatataatacatcaaatatatagatataacaaattgaagcataagtac |
11023373 |
T |
|
| Q |
263 |
tacaactcaacta |
275 |
Q |
| |
|
||||||||||||| |
|
|
| T |
11023372 |
tacaactcaacta |
11023360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 46 - 267
Target Start/End: Complemental strand, 18677663 - 18677437
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||||||| | ||||||| | ||| |
|
|
| T |
18677663 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaatatttacaaataaacgagcactcttcaaacaaaacaaacctttgtagaagagt |
18677564 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga--aattacaacaataaaataatacaccaaatgtgtagata |
240 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||| |||||||| |||||||||||||| | | |||||| |||||| |||||||||||||||||||||| |
|
|
| T |
18677563 |
ctctaaacccaagagatatcacctctcttgaaactttgggatcacacccaatacaaaataagagttacaataataaagtaatacaccaaatgtgtagata |
18677464 |
T |
|
| Q |
241 |
taacaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
||||||||||||||||||| ||||||| |
|
|
| T |
18677463 |
taacaaattgaagcacaagaactacaa |
18677437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 46 - 267
Target Start/End: Complemental strand, 12352623 - 12352401
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||| || |||||||| |||||||||| |||||||||||||| |||| || ||| |
|
|
| T |
12352623 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacatt-acaaataagcgagcactcttcaaacaaaacaatcctttgaag---agt |
12352528 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaa--ttacaacaataaaataatacaccaaatgtgtagata |
240 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||| |||||||| |||||||||||||| || | |||| |||||| |||||||||||||||||||||| |
|
|
| T |
12352527 |
ctctaaacccaagagatatcacctctcttgaaactttgggatcacacccaatacaaaataagagtaacaataataaagtaatacaccaaatgtgtagata |
12352428 |
T |
|
| Q |
241 |
taacaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
|||||| |||||||||||| ||||||| |
|
|
| T |
12352427 |
taacaagttgaagcacaagaactacaa |
12352401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 47 - 259
Target Start/End: Complemental strand, 14859282 - 14859074
Alignment:
| Q |
47 |
cttgagattttcactaaccg--cttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagtc |
143 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||| |||||||| ||||||| |||||||||| ||||||||||||| | || |||| |
|
|
| T |
14859282 |
cttgagattttcactaacctaacttttaaacgggataag----taacctttgcaaataaacgagcactcttcaaacaaaacaat-----gaagatgagtc |
14859192 |
T |
|
| Q |
144 |
tctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga--aattacaacaataaaataatacaccaaatgtgtagatat |
241 |
Q |
| |
|
|||||| | ||||||||||||||||||| |||| | |||||| |||||||||||||| | | |||||| |||||| || ||||||||| ||||||||| |
|
|
| T |
14859191 |
tctaaacccaagagatatcacctctcttgaaacttagggatcacacccaatacaaaataagagttacaataataaagaaagacaccaaatatgtagatat |
14859092 |
T |
|
| Q |
242 |
aacaaattgaagcacaag |
259 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
14859091 |
aacaaattgaagcacaag |
14859074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 46 - 200
Target Start/End: Complemental strand, 24170526 - 24170367
Alignment:
| Q |
46 |
ccttgagattttcactaaccg--cttttaaacaggataagcta--gtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggata |
140 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||| ||| ||||||||||||| ||| | ||||||| |||||||||| ||| ||| ||| | | |
|
|
| T |
24170526 |
ccttgagattttcactaaccaaacttttaaacaagataaactatagtaacctttacaagatagctagcactccccaaacaaaattatcctttatagaaga |
24170427 |
T |
|
| Q |
141 |
gtctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaa |
200 |
Q |
| |
|
|| |||| | |||| ||||||||||| || ||||||| |||||||||| ||||||||| |
|
|
| T |
24170426 |
acctttaaacccaagatatatcacctcttttgaaaccttaggatcgcacctaatacaaaa |
24170367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0031 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0031
Description:
Target: scaffold0031; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 46 - 267
Target Start/End: Original strand, 89161 - 89383
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaa-ataacgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||||| | || |
|
|
| T |
89161 |
ccttgagattttcactaacctagcttttaaacgggataagctagtaacctttacaagatagcgagcactctccaaacaaaacgatcctttgtagaagagc |
89260 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaattacaacaataaaataatacaccaaatgtgtagatata |
242 |
Q |
| |
|
||||||| | ||||||||||||||||||| |||||||||||| ||||||||||||||| | |||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
89261 |
ctctaaacccaagagatatcacctctcttgaaaccttgggattgcacccaatacaaaa-tagttacaataataaagtaatacaccaaatgtgtagatatt |
89359 |
T |
|
| Q |
243 |
acaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
|| ||||||| |||||| ||||||| |
|
|
| T |
89360 |
ac-aattgaaacacaagaactacaa |
89383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0047 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0047
Description:
Target: scaffold0047; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 46 - 267
Target Start/End: Complemental strand, 9295 - 9070
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||| ||||| |||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||| | || |
|
|
| T |
9295 |
ccttgagattttcattaacctagcttttaatcgggataagctagtaacctttacaaataagcgagcactcttcaaacaaaacaatcctttgtagaagagc |
9196 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaaga-aattacaacaataaaataatacaccaaatgtgtagatat |
241 |
Q |
| |
|
||||||| | || ||||||| |||||||| ||||||||||| | |||||||||||||| | | |||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
9195 |
ctctaaacccaaaagatatcgcctctcttaaaaccttgggaacacacccaatacaaaatagagttacaataataaagtaatacaccaaatgtgtagatat |
9096 |
T |
|
| Q |
242 |
aacaaattgaagcacaagtactacaa |
267 |
Q |
| |
|
|||||||||||| ||||| ||||||| |
|
|
| T |
9095 |
aacaaattgaagtacaagaactacaa |
9070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0882 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0882
Description:
Target: scaffold0882; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 46 - 276
Target Start/End: Original strand, 221 - 455
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| | |||||||| |||||||||||||| ||||||| | || |
|
|
| T |
221 |
ccttgagattttcattaacctagcttttaaacgggataagccagtaacctttacaaataaacaagcactcttcaaacaaaacaatcctttgtagaagagc |
320 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaa-ttacaacaataaaataatacaccaaatgtgtagatat |
241 |
Q |
| |
|
|||||| | |||||||||||| |||||| |||||||| |||| |||||||||||| | | | |||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
321 |
ttctaaacccaagagatatcacatctcttgaaaccttgagatcacacccaatacaagatagagttacaataataaagtaatacaccaaatgtgtagatat |
420 |
T |
|
| Q |
242 |
aacaaattgaagcacaagtactacaactcaactat |
276 |
Q |
| |
|
|||||||||| | |||| ||||||||||||||||| |
|
|
| T |
421 |
aacaaattgacgtacaattactacaactcaactat |
455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0766 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0766
Description:
Target: scaffold0766; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 46 - 276
Target Start/End: Complemental strand, 3182 - 2948
Alignment:
| Q |
46 |
ccttgagattttcactaacc--gcttttaaacaggataagctagtaacctttacaaataa-cgagcactctccaaacaaaacaatcttttgtaggatagt |
142 |
Q |
| |
|
|||||||||||||| ||||| |||||||||| |||||||| |||||||||||||||||| | |||||||| |||||||||||||| ||||||| | || |
|
|
| T |
3182 |
ccttgagattttcattaacctagcttttaaacgggataagccagtaacctttacaaataaacaagcactcttcaaacaaaacaatcctttgtagaagagc |
3083 |
T |
|
| Q |
143 |
ctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaa-ttacaacaataaaataatacaccaaatgtgtagatat |
241 |
Q |
| |
|
|||||| | |||||||||||| |||||| |||||||| |||| |||||||||||| | | | |||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
3082 |
ttctaaacccaagagatatcacatctcttgaaaccttgagatcacacccaatacaagatagagttacaataataaagtaatacaccaaatgtgtagatat |
2983 |
T |
|
| Q |
242 |
aacaaattgaagcacaagtactacaactcaactat |
276 |
Q |
| |
|
|||||||||| | |||| ||||||||||||||||| |
|
|
| T |
2982 |
aacaaattgacgtacaattactacaactcaactat |
2948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1744 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold1744
Description:
Target: scaffold1744; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 46 - 205
Target Start/End: Original strand, 268 - 432
Alignment:
| Q |
46 |
ccttgagattttcactaac--cgc-ttttaaacaggataagctagtaacctttacaaa--taacgagcactctccaaacaaaacaatcttttgtaggata |
140 |
Q |
| |
|
||||||||||||||||||| || |||||||| |||||||||||||||||||||||| || |||||||||||||||||||| | | ||||||| | | |
|
|
| T |
268 |
ccttgagattttcactaacttagctttttaaacgggataagctagtaacctttacaaaattagcgagcactctccaaacaaaattaccctttgtagaaga |
367 |
T |
|
| Q |
141 |
gtctctaaaactaagagatatcacctctctttaaaccttgggatcgcacccaatacaaaagaaat |
205 |
Q |
| |
|
| ||||||| ||||||||||||||||||| |||| |||||||| ||||||| ||||||||||| |
|
|
| T |
368 |
gcctctaaactcaagagatatcacctctcttgaaactttgggatcacacccaacacaaaagaaat |
432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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