View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17962_high_33 (Length: 266)
Name: NF17962_high_33
Description: NF17962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17962_high_33 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 23358265 - 23358018
Alignment:
| Q |
1 |
tcactaggatagtcaaagctctgccacaagtaaaaaccatgatcactatggtctttctcattatttacaaccaagtttccggtacctaagagcgttgctg |
100 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
23358265 |
tcactaggatagtcaaagctctgccacaagtaaaagccatgatcactatggtctttctcattatttacaaccaagtttccggtacctaagagctttgcta |
23358166 |
T |
|
| Q |
101 |
cgaagcttgaggttgaaggtttggttgttacatttgttgaccaatgagttgtgccatttttgctgagaagaacaaggtttccttctttgtttacgctcaa |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23358165 |
tgaagcttgaggttgaaggtttggttgttacatttgttgaccaatgagttgtgccatttttgctgagaagaacaaggtttccttctttgtttacgctcaa |
23358066 |
T |
|
| Q |
201 |
tatgccggatttgtcactgattggattgttgcgattggctacccaaac |
248 |
Q |
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||||||||||||||||||||||||||||| |||||| ||||||||||| |
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| T |
23358065 |
tatgccggatttgtcactgattggattgtcgcgatttgctacccaaac |
23358018 |
T |
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