View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17962_low_29 (Length: 297)
Name: NF17962_low_29
Description: NF17962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17962_low_29 |
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Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 11 - 281
Target Start/End: Original strand, 56173083 - 56173353
Alignment:
| Q |
11 |
caaaggtgataaagaagaatatgaatccaaattgggatgaacaattttgcttttgggttgatgatcttaaagaatcacttattatttctgtcaaggatga |
110 |
Q |
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| T |
56173083 |
caaaggtgataaagaagaatatgaatccaaattgggatgaacaattttgcttttgggttgatgatcttaaagaatcacttattatttctgtcaaggatga |
56173182 |
T |
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| Q |
111 |
agataagtttattaataatcatttggttggaagacttaaacttccaatttcacttgtttttgaggaagacattaaatcccttggcaatgcttggtacatt |
210 |
Q |
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| T |
56173183 |
agataagtttattaataatcatttggttggaagacttaaacttccaatttcacttgtttttgaggaagacattaaatcccttggcaatgcttggtacatt |
56173282 |
T |
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| Q |
211 |
ttgaagccaaaaaagaagaagtcaaagaataaggaatgtggtatattttctcatacccttatccaacaatt |
281 |
Q |
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| T |
56173283 |
ttgaagccaaaaaagaagaagtcaaagaataaggaatgtggtatattttctcatacccttatccaacaatt |
56173353 |
T |
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