View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17963_high_21 (Length: 235)

Name: NF17963_high_21
Description: NF17963
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17963_high_21
NF17963_high_21
[»] chr3 (46 HSPs)
chr3 (3-225)||(3264476-3264698)
chr3 (1-217)||(36528188-36528404)
chr3 (29-210)||(52989253-52989434)
chr3 (1-65)||(12119374-12119438)
chr3 (2-68)||(16282286-16282352)
chr3 (3-65)||(38961367-38961429)
chr3 (3-65)||(55319026-55319088)
chr3 (145-210)||(14966681-14966746)
chr3 (28-65)||(15958759-15958796)
chr3 (32-65)||(16358226-16358259)
chr3 (20-65)||(17792876-17792921)
chr3 (20-65)||(19101316-19101361)
chr3 (29-65)||(3264309-3264345)
chr3 (1-65)||(10379705-10379769)
chr3 (1-65)||(10557286-10557350)
chr3 (1-65)||(29544562-29544626)
chr3 (1-65)||(41124317-41124381)
chr3 (1-61)||(53301224-53301284)
chr3 (1-65)||(54521200-54521264)
chr3 (2-65)||(13937501-13937564)
chr3 (2-65)||(24514054-24514117)
chr3 (3-65)||(15465532-15465594)
chr3 (2-68)||(17444292-17444358)
chr3 (3-65)||(46822639-46822701)
chr3 (28-65)||(21026161-21026198)
chr3 (1-65)||(5223761-5223825)
chr3 (1-65)||(8500091-8500155)
chr3 (1-57)||(10247444-10247500)
chr3 (5-65)||(12567937-12567997)
chr3 (5-65)||(13544401-13544461)
chr3 (1-65)||(15412809-15412873)
chr3 (1-57)||(15977918-15977974)
chr3 (5-65)||(16282482-16282542)
chr3 (1-57)||(16454001-16454057)
chr3 (20-68)||(16999679-16999727)
chr3 (1-65)||(17444484-17444548)
chr3 (1-57)||(17463563-17463619)
chr3 (5-65)||(20629916-20629976)
chr3 (1-61)||(27165634-27165694)
chr3 (5-65)||(27165823-27165883)
chr3 (104-148)||(27868748-27868792)
chr3 (1-57)||(34159711-34159767)
chr3 (1-65)||(38961558-38961622)
chr3 (1-65)||(41124510-41124574)
chr3 (1-57)||(45606627-45606683)
chr3 (2-62)||(55318832-55318892)
[»] chr7 (27 HSPs)
chr7 (5-225)||(11309973-11310193)
chr7 (29-217)||(48812510-48812698)
chr7 (29-207)||(46580116-46580294)
chr7 (44-210)||(11091133-11091289)
chr7 (1-65)||(14269484-14269548)
chr7 (1-65)||(14269677-14269741)
chr7 (2-65)||(8941047-8941110)
chr7 (3-65)||(23664675-23664737)
chr7 (1-65)||(14156606-14156670)
chr7 (1-65)||(16108409-16108473)
chr7 (1-61)||(25926850-25926910)
chr7 (1-65)||(29796988-29797052)
chr7 (1-65)||(29800807-29800871)
chr7 (2-65)||(14269292-14269355)
chr7 (2-65)||(38897756-38897819)
chr7 (1-65)||(10500948-10501012)
chr7 (1-65)||(11303625-11303689)
chr7 (1-65)||(13869726-13869790)
chr7 (1-57)||(14948843-14948899)
chr7 (1-57)||(15376434-15376490)
chr7 (1-57)||(16232906-16232962)
chr7 (1-57)||(16410444-16410500)
chr7 (1-57)||(20384844-20384900)
chr7 (1-65)||(26355702-26355766)
chr7 (1-65)||(26358154-26358218)
chr7 (1-57)||(27217246-27217302)
chr7 (1-57)||(32125876-32125932)
[»] scaffold0153 (2 HSPs)
scaffold0153 (29-210)||(11796-11977)
scaffold0153 (38-210)||(4776-4948)
[»] scaffold0395 (1 HSPs)
scaffold0395 (29-207)||(11379-11557)
[»] chr4 (29 HSPs)
chr4 (29-210)||(10057151-10057332)
chr4 (29-198)||(20872621-20872790)
chr4 (1-65)||(14970427-14970491)
chr4 (1-65)||(15534559-15534623)
chr4 (1-68)||(14746039-14746106)
chr4 (2-65)||(18214732-18214795)
chr4 (2-65)||(52313132-52313195)
chr4 (2-65)||(52313325-52313388)
chr4 (3-65)||(362944-363006)
chr4 (1-65)||(362751-362815)
chr4 (29-65)||(14185706-14185742)
chr4 (1-65)||(15495894-15495958)
chr4 (1-65)||(36038248-36038312)
chr4 (1-65)||(49547494-49547558)
chr4 (1-65)||(52312939-52313003)
chr4 (1-65)||(52872600-52872664)
chr4 (2-57)||(11976-12031)
chr4 (2-65)||(3515578-3515641)
chr4 (20-59)||(16283504-16283543)
chr4 (2-65)||(19617595-19617658)
chr4 (34-148)||(18555298-18555412)
chr4 (1-62)||(52872793-52872854)
chr4 (1-65)||(3515385-3515449)
chr4 (1-57)||(7640907-7640963)
chr4 (2-58)||(12778404-12778460)
chr4 (1-57)||(15118073-15118129)
chr4 (1-65)||(19857956-19858020)
chr4 (1-57)||(29267739-29267795)
chr4 (1-65)||(44772804-44772868)
[»] chr6 (28 HSPs)
chr6 (29-217)||(27851675-27851863)
chr6 (29-207)||(20733639-20733817)
chr6 (1-65)||(1598434-1598498)
chr6 (1-65)||(25535785-25535849)
chr6 (3-65)||(19005722-19005784)
chr6 (1-65)||(1885-1949)
chr6 (1-65)||(8844-8908)
chr6 (1-57)||(1540632-1540688)
chr6 (1-57)||(12742703-12742759)
chr6 (1-65)||(17883218-17883282)
chr6 (1-65)||(23415342-23415406)
chr6 (5-65)||(26924365-26924425)
chr6 (1-65)||(30676430-30676494)
chr6 (1-65)||(34963751-34963815)
chr6 (2-57)||(18914704-18914759)
chr6 (4-63)||(23992802-23992861)
chr6 (2-65)||(31630069-31630132)
chr6 (19-65)||(17377586-17377632)
chr6 (34-148)||(19545722-19545836)
chr6 (1-62)||(15892129-15892190)
chr6 (1-65)||(93-157)
chr6 (1-57)||(8055415-8055471)
chr6 (1-57)||(18334313-18334369)
chr6 (1-65)||(18914503-18914567)
chr6 (1-57)||(24422932-24422988)
chr6 (1-65)||(25689073-25689137)
chr6 (1-57)||(33862179-33862235)
chr6 (1-57)||(33864663-33864719)
[»] chr8 (33 HSPs)
chr8 (29-210)||(22237445-22237627)
chr8 (29-210)||(19807789-19807970)
chr8 (29-210)||(21321542-21321713)
chr8 (29-143)||(21326140-21326254)
chr8 (1-65)||(32122299-32122363)
chr8 (1-65)||(14824152-14824216)
chr8 (1-65)||(15071131-15071195)
chr8 (2-65)||(38549341-38549404)
chr8 (1-65)||(15202706-15202770)
chr8 (1-61)||(16198276-16198336)
chr8 (1-65)||(19896892-19896956)
chr8 (1-65)||(19936628-19936692)
chr8 (1-65)||(38549532-38549596)
chr8 (6-65)||(32810274-32810333)
chr8 (3-65)||(16412845-16412907)
chr8 (3-65)||(24049181-24049243)
chr8 (1-57)||(1484787-1484843)
chr8 (1-57)||(4542094-4542150)
chr8 (1-57)||(5853013-5853069)
chr8 (1-65)||(14397461-14397525)
chr8 (1-57)||(14409165-14409221)
chr8 (1-65)||(15070938-15071002)
chr8 (1-65)||(15202899-15202963)
chr8 (21-65)||(16401472-16401516)
chr8 (1-65)||(16413036-16413100)
chr8 (1-65)||(18677785-18677849)
chr8 (1-57)||(20045916-20045972)
chr8 (1-65)||(24048988-24049052)
chr8 (1-65)||(24485764-24485828)
chr8 (21-65)||(27471964-27472008)
chr8 (1-65)||(27472137-27472201)
chr8 (1-65)||(32122106-32122170)
chr8 (1-65)||(45290268-45290332)
[»] chr2 (39 HSPs)
chr2 (29-210)||(27472932-27473113)
chr2 (29-210)||(20915784-20915965)
chr2 (29-210)||(34858587-34858758)
chr2 (29-210)||(34873649-34873820)
chr2 (2-65)||(23932031-23932094)
chr2 (29-142)||(22497683-22497797)
chr2 (2-68)||(24918708-24918774)
chr2 (1-65)||(20261597-20261661)
chr2 (5-65)||(21154346-21154406)
chr2 (2-65)||(23706554-23706617)
chr2 (1-68)||(41523600-41523667)
chr2 (28-70)||(21554510-21554552)
chr2 (1-65)||(10684483-10684547)
chr2 (1-65)||(21154535-21154599)
chr2 (1-65)||(22105843-22105907)
chr2 (33-85)||(22497602-22497654)
chr2 (1-65)||(24368204-24368268)
chr2 (1-57)||(26505764-26505820)
chr2 (1-65)||(45027625-45027689)
chr2 (6-65)||(6726618-6726677)
chr2 (20-65)||(23652364-23652409)
chr2 (1-57)||(18809328-18809384)
chr2 (104-148)||(18985702-18985746)
chr2 (1-65)||(22106036-22106100)
chr2 (1-65)||(23131240-23131304)
chr2 (1-65)||(23133707-23133771)
chr2 (1-65)||(23706937-23707001)
chr2 (1-57)||(23711734-23711790)
chr2 (21-65)||(24529094-24529138)
chr2 (1-65)||(24642469-24642533)
chr2 (1-65)||(24671403-24671467)
chr2 (1-65)||(24681822-24681886)
chr2 (1-57)||(26508242-26508298)
chr2 (1-65)||(28577476-28577540)
chr2 (1-65)||(32214457-32214521)
chr2 (1-65)||(32214651-32214715)
chr2 (1-65)||(34402242-34402306)
chr2 (1-57)||(39682699-39682755)
chr2 (1-65)||(41523793-41523857)
[»] scaffold0174 (1 HSPs)
scaffold0174 (38-210)||(13113-13285)
[»] scaffold0074 (2 HSPs)
scaffold0074 (37-210)||(1414-1587)
scaffold0074 (5-65)||(38380-38440)
[»] scaffold0686 (1 HSPs)
scaffold0686 (29-210)||(915-1096)
[»] scaffold0032 (1 HSPs)
scaffold0032 (29-210)||(67773-67954)
[»] chr5 (22 HSPs)
chr5 (29-217)||(24564432-24564618)
chr5 (29-217)||(24605467-24605653)
chr5 (34-148)||(25581933-25582047)
chr5 (33-134)||(25581741-25581842)
chr5 (1-65)||(17516884-17516948)
chr5 (2-65)||(2154160-2154223)
chr5 (2-65)||(32028210-32028273)
chr5 (1-65)||(295995-296059)
chr5 (1-65)||(20901641-20901705)
chr5 (1-65)||(20917567-20917631)
chr5 (1-65)||(29330360-29330424)
chr5 (2-65)||(29330553-29330616)
chr5 (2-65)||(32028596-32028659)
chr5 (4-65)||(17516501-17516562)
chr5 (4-65)||(20917377-20917438)
chr5 (157-197)||(13938509-13938549)
chr5 (1-57)||(29346365-29346421)
chr5 (1-57)||(29348838-29348894)
chr5 (1-57)||(29351311-29351367)
chr5 (1-65)||(32027823-32027887)
chr5 (1-65)||(38619814-38619878)
chr5 (1-65)||(39363762-39363826)
[»] scaffold0207 (2 HSPs)
scaffold0207 (33-142)||(1150-1259)
scaffold0207 (34-148)||(1342-1456)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-65)||(8117-8181)
[»] scaffold0574 (2 HSPs)
scaffold0574 (1-65)||(6829-6893)
scaffold0574 (6-65)||(7022-7081)
[»] chr1 (24 HSPs)
chr1 (1-65)||(15859523-15859587)
chr1 (1-65)||(15859729-15859793)
chr1 (1-65)||(29777118-29777182)
chr1 (1-65)||(43543279-43543343)
chr1 (2-65)||(22050558-22050621)
chr1 (2-65)||(29298812-29298875)
chr1 (1-65)||(16274976-16275040)
chr1 (1-65)||(16401492-16401556)
chr1 (1-65)||(21841144-21841208)
chr1 (2-65)||(16274784-16274847)
chr1 (3-65)||(31613129-31613191)
chr1 (3-65)||(40129462-40129524)
chr1 (1-62)||(22122735-22122796)
chr1 (4-65)||(27161310-27161371)
chr1 (1-65)||(9044725-9044789)
chr1 (1-65)||(13227241-13227305)
chr1 (1-57)||(13989251-13989307)
chr1 (1-65)||(16362296-16362360)
chr1 (1-57)||(21923012-21923068)
chr1 (5-65)||(27161118-27161178)
chr1 (1-65)||(29298619-29298683)
chr1 (28-68)||(31343712-31343752)
chr1 (1-65)||(31612743-31612807)
chr1 (1-61)||(31612940-31613000)
[»] scaffold0364 (2 HSPs)
scaffold0364 (43-142)||(14164-14263)
scaffold0364 (36-148)||(13967-14079)
[»] scaffold0317 (2 HSPs)
scaffold0317 (3-65)||(6658-6720)
scaffold0317 (3-65)||(6465-6527)
[»] scaffold0306 (2 HSPs)
scaffold0306 (3-65)||(11062-11124)
scaffold0306 (3-65)||(10869-10931)
[»] scaffold0716 (1 HSPs)
scaffold0716 (1-65)||(5072-5136)
[»] scaffold0436 (1 HSPs)
scaffold0436 (1-65)||(8396-8460)
[»] scaffold0322 (1 HSPs)
scaffold0322 (1-65)||(18508-18572)
[»] scaffold0293 (1 HSPs)
scaffold0293 (1-65)||(19809-19873)
[»] scaffold0200 (1 HSPs)
scaffold0200 (1-65)||(18031-18095)
[»] scaffold0149 (1 HSPs)
scaffold0149 (1-65)||(30590-30654)
[»] scaffold0138 (1 HSPs)
scaffold0138 (1-65)||(33549-33613)
[»] scaffold0043 (2 HSPs)
scaffold0043 (1-65)||(10362-10426)
scaffold0043 (2-65)||(10555-10618)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-65)||(94788-94852)
scaffold0023 (5-57)||(17164-17216)
[»] scaffold1296 (2 HSPs)
scaffold1296 (2-65)||(1825-1888)
scaffold1296 (3-63)||(1634-1694)
[»] scaffold0747 (2 HSPs)
scaffold0747 (6-65)||(1279-1338)
scaffold0747 (1-65)||(1160-1224)
[»] scaffold0001 (1 HSPs)
scaffold0001 (2-65)||(501635-501698)
[»] scaffold1405 (1 HSPs)
scaffold1405 (34-148)||(1300-1414)
[»] scaffold0094 (1 HSPs)
scaffold0094 (34-84)||(3078-3128)
[»] scaffold0741 (2 HSPs)
scaffold0741 (1-65)||(3637-3701)
scaffold0741 (1-65)||(3830-3894)
[»] scaffold0711 (1 HSPs)
scaffold0711 (1-65)||(7410-7474)
[»] scaffold0695 (1 HSPs)
scaffold0695 (1-65)||(6324-6388)
[»] scaffold0363 (1 HSPs)
scaffold0363 (1-65)||(9619-9683)
[»] scaffold0290 (1 HSPs)
scaffold0290 (104-148)||(12322-12366)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-57)||(38207-38263)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-57)||(31589-31645)
[»] scaffold0042 (1 HSPs)
scaffold0042 (21-65)||(75645-75689)


Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-116; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 3 - 225
Target Start/End: Original strand, 3264476 - 3264698
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcac 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3264476 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcatttggagacactcgatttgagcac 3264575  T
Q  103 atagaattcaagctatgatcaaaatattacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaat 202  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3264576 atagaactcaagctatgatcaaaatactacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaat 3264675  T
Q  203 tttctgtttcgaattgtcctttg 225  Q
    |||||||||||||||||||||||    
T  3264676 tttctgtttcgaattgtcctttg 3264698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 36528404 - 36528188
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagc 100  Q
    ||||||||||||||||| ||||||| |||||| |||   |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||    
T  36528404 actggtattgataagtacagaattggtcttagatgtaaacacgaaagttgtaggtatggatgttatctgtcactagcctttggaggcactagatttaagc 36528305  T
Q  101 acatagaattcaagctatgatcaaaatattacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctgga 200  Q
    |||||||| ||||| ||||||||||||| |||||||||||||| |||||| ||||||| ||||||||||||||||||||||| ||| |||||||||||||    
T  36528304 acatagaactcaagttatgatcaaaatactacacagaggtcagcagggataaacacggccgtgctctttccccgagcttaggtaaatcaacttttctgga 36528205  T
Q  201 attttctgtttcgaatt 217  Q
    | |||||||||||||||    
T  36528204 actttctgtttcgaatt 36528188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 29 - 210
Target Start/End: Original strand, 52989253 - 52989434
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| | |||||||| ||||| |||| ||||||||||| ||||| |||||||||| ||    
T  52989253 ttaggtgccttcacgaaagttgtagatatggatgttatctgtcactcggctttggaggcactcaatttaagcacatagaactcaagatatgatcaaatta 52989352  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
     ||||||| |||||| |||||||||||| ||||| |||||| ||||||| |||||||| ||| |||||||||||||||||||    
T  52989353 ctacacaggggtcagcagggatcaacacagtcgtcctcttttcccgagcataggaaaatcaatttttctggaattttctgtt 52989434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 12119374 - 12119438
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| |||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  12119374 actggtattgatcagtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 12119438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 16282286 - 16282352
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgttatct 68  Q
    |||||||||||| ||  ||||||| ||||||||||   |||||||||||||||||| ||||||||||    
T  16282286 ctggtattgataggtcaagaattggtcttaggtgtaaacacgaaagttgtaggtatagatgttatct 16282352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 38961367 - 38961429
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||| ||  ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  38961367 tggtattgataggtcaagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 38961429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 55319026 - 55319088
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  55319026 tggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 55319088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 210
Target Start/End: Complemental strand, 14966746 - 14966681
Alignment:
Q  145 agggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
    |||| ||||||| ||||| |||||| | ||||| || ||||| |||||||||||||||||||||||    
T  14966746 aggggtcaacacagtcgtcctcttttctcgagcatacgaaaatcaacttttctggaattttctgtt 14966681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 15958759 - 15958796
Alignment:
Q  28 cttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||||| |||||||||||||||||||||||    
T  15958759 cttaggtgtcttcatgaaagttgtaggtatggatgtta 15958796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 65
Target Start/End: Original strand, 16358226 - 16358259
Alignment:
Q  32 ggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||||||||||||||||||||||||    
T  16358226 ggtgtcttcacgaaagttgtaggtatggatgtta 16358259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 17792921 - 17792876
Alignment:
Q  20 gaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||| |||||||||||||| ||||||| |||||||||||||||    
T  17792921 gaattgagcttaggtgtcttcatgaaagttttaggtatggatgtta 17792876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 19101361 - 19101316
Alignment:
Q  20 gaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||| |||||||||||||| ||||||| |||||||||||||||    
T  19101361 gaattgagcttaggtgtcttcatgaaagttttaggtatggatgtta 19101316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 3264309 - 3264345
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||| |||||||||||||||||||||||    
T  3264309 ttaggtgtcttcatgaaagttgtaggtatggatgtta 3264345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10379769 - 10379705
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||   || ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  10379769 actggtattgattgatacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 10379705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10557350 - 10557286
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  10557350 actggtattgattggtaaataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 10557286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 29544562 - 29544626
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||| |||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  29544562 actgttattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 29544626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41124381 - 41124317
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  41124381 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 41124317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 53301224 - 53301284
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggat 61  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||    
T  53301224 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggat 53301284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 54521264 - 54521200
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   |||||||||||| |||||||||||||    
T  54521264 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtgggtatggatgtta 54521200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 13937501 - 13937564
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| |   ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  13937501 ctggtattgataggacaagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 13937564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 24514117 - 24514054
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  |  ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  24514117 ctggtattgatagctccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 24514054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 15465594 - 15465532
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  15465594 tggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 15465532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 17444292 - 17444358
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgttatct 68  Q
    |||||||||||| ||  ||||||| ||||||||||   || |||||||||| |||||||||||||||    
T  17444292 ctggtattgataggtccagaattggtcttaggtgtaaacaggaaagttgtaagtatggatgttatct 17444358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 46822701 - 46822639
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  46822701 tggtattgattggtaaacaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 46822639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 21026198 - 21026161
Alignment:
Q  28 cttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  21026198 cttaggggtcttcatgaaagttgtaggtatggatgtta 21026161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5223825 - 5223761
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||  ||||||||||   |||||||||| |||||||||||||||    
T  5223825 actggtattgattggtacagaattcgtcttaggtgtaaacacgaaagttataggtatggatgtta 5223761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8500155 - 8500091
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||   |||||||||| ||||||||||   ||| |||||||||||||| |||||||    
T  8500155 actggtattgatcgatatagaattggtcttaggtgtaaacacaaaagttgtaggtatagatgtta 8500091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 10247444 - 10247500
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  10247444 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 10247500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 12567997 - 12567937
Alignment:
Q  5 gtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  12567997 gtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 12567937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 13544461 - 13544401
Alignment:
Q  5 gtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  13544461 gtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 13544401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15412873 - 15412809
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| |||||||| |   ||||||||||||||||||||||||||    
T  15412873 actggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgtta 15412809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15977974 - 15977918
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  15977974 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 15977918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 16282482 - 16282542
Alignment:
Q  5 gtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  16282482 gtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 16282542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 16454001 - 16454057
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  16454001 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 16454057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 16999679 - 16999727
Alignment:
Q  20 gaattgatcttaggtgtcttcacgaaagttgtaggtatggatgttatct 68  Q
    ||||||| |||| ||||||||| ||||||||||| |||| |||||||||    
T  16999679 gaattgaacttatgtgtcttcatgaaagttgtagatatgaatgttatct 16999727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17444484 - 17444548
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||| ||||   ||||||||||||||||||| ||||||    
T  17444484 actggtattgattggtacagaattggtcttaagtgtaaacacgaaagttgtaggtatgaatgtta 17444548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17463619 - 17463563
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  17463619 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 17463563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 20629916 - 20629976
Alignment:
Q  5 gtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||  ||| ||||||| ||||||||||   ||| ||||||||||||||||||||||    
T  20629916 gtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 20629976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27165694 - 27165634
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggat 61  Q
    ||||||||||||  ||| ||||||| ||||||| ||   ||||||||||||||||||||||    
T  27165694 actggtattgattggtacagaattggtcttaggggtaaacacgaaagttgtaggtatggat 27165634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 27165883 - 27165823
Alignment:
Q  5 gtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  27165883 gtattgatcggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgtatgtta 27165823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 27868748 - 27868792
Alignment:
Q  104 tagaattcaagctatgatcaaaatattacacagaggtcagtaggg 148  Q
    ||||| ||||| ||||||||||||| |||||||||||||| ||||    
T  27868748 tagaactcaagatatgatcaaaatactacacagaggtcagcaggg 27868792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34159767 - 34159711
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  34159767 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 34159711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 38961558 - 38961622
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||   || ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  38961558 actggtattgattgatacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 38961622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 41124574 - 41124510
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||| ||||||||||||||| ||||||    
T  41124574 actggtattgattggtaaagaattggtcttaggtgtaaacacaaaagttgtaggtatgaatgtta 41124510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 45606627 - 45606683
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  45606627 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 45606683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 55318832 - 55318892
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatg 62  Q
    |||||||||||| ||  |||| || ||||||||||   |||||||||||||||||||||||    
T  55318832 ctggtattgataggtccagaactggtcttaggtgtaaacacgaaagttgtaggtatggatg 55318892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 149; Significance: 8e-79; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 11310193 - 11309973
Alignment:
Q  5 gtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacat 104  Q
    ||||||||||||| | ||||| |||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||| |||||||||| || ||||    
T  11310193 gtattgataagtacataattggtcttaggtgttttcacaaaagttgtaggtatagatgttatctgtcactagcctttagaggcactcgatttaagtacat 11310094  T
Q  105 agaattcaagctatgatcaaaatattacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattt 204  Q
    |||| ||||| ||||||||||||| |||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11310093 agaactcaagatatgatcaaaatactacagagaggtcaatagagatcaacacggtcgtgctctttccccgagcttaggaaaatcaacttttctggaattt 11309994  T
Q  205 tctgtttcgaattgtcctttg 225  Q
     ||||||||||||||||||||    
T  11309993 cctgtttcgaattgtcctttg 11309973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 217
Target Start/End: Complemental strand, 48812698 - 48812510
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| |||||| |||||||||| |||||||||||||||||||| | |||||||| ||||| | || ||||||||||| ||||| |||||||||| ||    
T  48812698 ttaggtgccttcacaaaagttgtagatatggatgttatctgtcactcggctttggaggcactccagtttagcacatagaactcaagatatgatcaaatta 48812599  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtttcgaatt 217  Q
     ||||||  |||||  |||||||| ||| ||||| |||||| ||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  48812598 ctacacaagggtcaacagggatcagcacagtcgtcctcttttcccgagcataggaaaatcaacttttctggaattttctgttccgaatt 48812510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 46580116 - 46580294
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| |||||| |||||||||| |||||||||||| ||||||| |  ||||||| |||||||||| ||||||||||| ||||| |||||||||| ||    
T  46580116 ttaggtgccttcacaaaagttgtagatatggatgttatatgtcactcggatttggaggcactcgatttaagcacatagaactcaagatatgatcaaatta 46580215  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttct 207  Q
     || |||| |||||| |||||||| ||| ||||| |||||| ||||||| |||||||| ||| |||||  |||||||||    
T  46580216 ctatacaggggtcagcagggatcagcacagtcgtcctcttttcccgagcataggaaaatcaaattttcctgaattttct 46580294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 11091289 - 11091133
Alignment:
Q  44 aaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaatattacacagaggtcag 143  Q
    |||||||||| |||||||||||| ||||||| | |||||||| |||||||||| |||||||| || ||||| ||| |||||| || ||||||| ||||||    
T  11091289 aaagttgtagatatggatgttatttgtcactcggctttggaggcactcgatttaagcacatataactcaagatataatcaaattactacacaggggtcag 11091190  T
Q  144 tagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
              ||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||||    
T  11091189 ----------cacagtcgtgctcttttcccgagcataggaaaatcaacttttctggaattttctgtt 11091133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14269484 - 14269548
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  14269484 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 14269548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14269677 - 14269741
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  14269677 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 14269741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 8941110 - 8941047
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||  ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  8941110 ctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 8941047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 23664675 - 23664737
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  23664675 tggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 23664737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14156606 - 14156670
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| |||||||||    ||||||||||||||||||||||||||    
T  14156606 actggtattgatcggtacagaattggtcttaggtgataacacgaaagttgtaggtatggatgtta 14156670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16108409 - 16108473
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  16108409 actggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 16108473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25926850 - 25926910
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggat 61  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||    
T  25926850 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggat 25926910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29797052 - 29796988
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||   || ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  29797052 actggtattgattgatacagaattggtcttaggtgtaagcacgaaagttgtaggtatggatgtta 29796988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29800871 - 29800807
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||   || ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  29800871 actggtattgattgatacagaattggtcttaggtgtaagcacgaaagttgtaggtatggatgtta 29800807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 14269292 - 14269355
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||  ||| ||||||| ||||||||||   ||| ||||||||||||||||||||||    
T  14269292 ctggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 14269355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 38897756 - 38897819
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||  ||||||| ||||||||||   | ||||||||||||||||||||||||    
T  38897756 ctggtattgataggtccagaattggtcttaggtgtaaactcgaaagttgtaggtatggatgtta 38897819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10500948 - 10501012
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| |||||||||    || |||||||||||||||||||||||    
T  10500948 actggtattgatcggtacagaattggtcttaggtgataacatgaaagttgtaggtatggatgtta 10501012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 11303689 - 11303625
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| |||||| |||   ||||||||||||||||||||||||||    
T  11303689 actggtattgattggtacataattggtcttagatgtaaacacgaaagttgtaggtatggatgtta 11303625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13869790 - 13869726
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| |||||||| |   ||||||||||||||||||||||||||    
T  13869790 actggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgtta 13869726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14948843 - 14948899
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  14948843 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 14948899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 15376434 - 15376490
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  15376434 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 15376490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16232962 - 16232906
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  16232962 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 16232906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16410500 - 16410444
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  16410500 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 16410444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 20384844 - 20384900
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  20384844 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 20384900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 26355702 - 26355766
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||| ||||   ||||||||||||||||||| ||||||    
T  26355702 actggtattgattggtacagaattggtcttatgtgttaacacgaaagttgtaggtatgaatgtta 26355766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 26358154 - 26358218
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||| ||||   ||||||||||||||||||| ||||||    
T  26358154 actggtattgattggtacagaattggtcttatgtgttaacacgaaagttgtaggtatgaatgtta 26358218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27217302 - 27217246
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  27217302 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 27217246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 32125932 - 32125876
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  32125932 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 32125876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 29 - 210
Target Start/End: Complemental strand, 11977 - 11796
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| | |||||||| |||||||||| ||||||||||| ||||  |||||||||| ||    
T  11977 ttaggtgccttcacgaaagttgtagatatggatgttatctgtcactcggctttggaggcactcgatttaagcacatagaactcaaaatatgatcaaatta 11878  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
     ||||||| |||||| |||||||||||| ||||| |||||| | ||||| |||||||| |||||||||||||||||||||||    
T  11877 ctacacaggggtcagcagggatcaacacagtcgtcctcttttcacgagcataggaaaatcaacttttctggaattttctgtt 11796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 4948 - 4776
Alignment:
Q  38 ttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaatattacacaga 137  Q
    |||||||||||||||| |||||||||||||||||||| |  ||||||| |||||||||| ||||||||||| ||||  |||||||||| || |||||||     
T  4948 ttcacgaaagttgtagatatggatgttatctgtcactcgtgtttggaggcactcgatttaagcacatagaactcaaaatatgatcaaattactacacagg 4849  T
Q  138 ggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
    |||||| |||||||||||| ||||| |||||| | ||||| |||||||| |||||||||||||||||||||||    
T  4848 ggtcagcagggatcaacacagtcgtcctcttttcacgagcataggaaaatcaacttttctggaattttctgtt 4776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 29 - 207
Target Start/End: Complemental strand, 11557 - 11379
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| | ||||||||| |||||| || ||||||||||| ||||| |||||||||| ||    
T  11557 ttaggtgccttcacgaaagttgtagatatggatgttatctgtcactcggctttggagaaactcgaattaagcacatagaactcaagatatgatcaaatta 11458  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttct 207  Q
     ||||||| |||||| |||||||| ||| ||||| |||||| ||||||| |||||||| ||||||||||||||||||||    
T  11457 ctacacaggggtcagcagggatcagcacagtcgtcctcttttcccgagcataggaaaatcaacttttctggaattttct 11379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 9e-51; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 29 - 210
Target Start/End: Complemental strand, 10057332 - 10057151
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| ||| ||||||||||||| |||||||||||||||||||| | |||| ||| |||||||||| ||||||||||| ||||| |||||||||| ||    
T  10057332 ttaggtgccttaacgaaagttgtagatatggatgttatctgtcactcggcttttgaggcactcgatttaagcacatagaactcaagatatgatcaaatta 10057233  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
     ||||||| |||||| |||||||| ||| ||||| |||||| ||||||| |||||||| |||||||||||||||||||||||    
T  10057232 ctacacaggggtcagcagggatcagcacagtcgtcctcttttcccgagcataggaaaatcaacttttctggaattttctgtt 10057151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 198
Target Start/End: Original strand, 20872621 - 20872790
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||||||||| |||  |||||| |||||||||||  | ||||||||||||||||  ||| ||||| ||||  ||||  ||||  |||||||||||||    
T  20872621 ttaggtgtcttcatgaacattgtagatatggatgttaggtttcactagcctttggaggaacttgatttaagcatctagatctcaatatatgatcaaaata 20872720  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctg 198  Q
      ||| || | |||| ||||||||||| ||||||||| ||||||  |||||||||||| || ||||||||    
T  20872721 ccacaaagggttcagcagggatcaacaaggtcgtgctttttccctaagcttaggaaaatcatcttttctg 20872790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14970427 - 14970491
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||||||||||| ||||||||||   ||||||||||||||||||||||||||    
T  14970427 actggtattgattggtatagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 14970491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15534623 - 15534559
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  15534623 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 15534559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14746039 - 14746106
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgttatct 68  Q
    ||||||||||||  ||| ||||||| ||||||||||   || ||||||||||||||||||||||||||    
T  14746039 actggtattgattggtacagaattggtcttaggtgtaaacaagaaagttgtaggtatggatgttatct 14746106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 18214732 - 18214795
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||  ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  18214732 ctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 18214795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 52313195 - 52313132
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||  ||||||||||||||||||   ||| ||||||||||||||||||||||    
T  52313195 ctggtattgataggtccagaattgatcttaggtgtaaacacaaaagttgtaggtatggatgtta 52313132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 52313388 - 52313325
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||  ||||||||||||||||||   |||||||||| |||||||||||||||    
T  52313388 ctggtattgataggtcaagaattgatcttaggtgtaaacacgaaagttataggtatggatgtta 52313325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 363006 - 362944
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||  ||||||||||| ||||||||||   | ||||||||||||||||||||||||    
T  363006 tggtattgatttgtatagaattggtcttaggtgtaaacccgaaagttgtaggtatggatgtta 362944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 362815 - 362751
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||| ||||||||||||||||||||||    
T  362815 actggtattgattggtacagaattggtcttaggtgtaaacactaaagttgtaggtatggatgtta 362751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 14185742 - 14185706
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||| |||||||||||||||||||||||||||||||    
T  14185742 ttaggagtcttcacgaaagttgtaggtatggatgtta 14185706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15495894 - 15495958
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||| ||||||||||||||||||||||    
T  15495894 actggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 15495958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 36038312 - 36038248
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| |||||||  |||||||||   ||||||||||||||||||||||||||    
T  36038312 actggtattgattggtacagaattggccttaggtgtaaacacgaaagttgtaggtatggatgtta 36038248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 49547494 - 49547558
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||| ||||||||||||||||||    
T  49547494 actggtattgattggtacagaattggtcttaggtgtaaacacgaaatttgtaggtatggatgtta 49547558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 52313003 - 52312939
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  52313003 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 52312939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 52872600 - 52872664
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  52872600 actggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 52872664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 11976 - 12031
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    |||||||||||| ||| ||||||| ||||||||||   ||||||||||||||||||    
T  11976 ctggtattgataggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 12031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 3515641 - 3515578
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||  ||||||| ||||||| ||   ||||||||||||||||||||||||||    
T  3515641 ctggtattgataggtccagaattggtcttaggcgtaaacacgaaagttgtaggtatggatgtta 3515578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 16283504 - 16283543
Alignment:
Q  20 gaattgatcttaggtgtcttcacgaaagttgtaggtatgg 59  Q
    ||||||| |||||||||||||| |||||||||||||||||    
T  16283504 gaattgagcttaggtgtcttcatgaaagttgtaggtatgg 16283543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 19617595 - 19617658
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  19617595 ctggtattgattggtacataattggtcttaggtgtagacacgaaagttgtaggtatggatgtta 19617658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 18555298 - 18555412
Alignment:
Q  34 tgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaatattaca 133  Q
    |||||||| |||||| |||| ||| ||||||| || ||||||||||||||||  |||| |||| || |  || || ||||| |||||| |||||| | ||    
T  18555298 tgtcttcatgaaagtggtagatatcgatgttagctttcactagcctttggagggactctatttaagtatctataactcaagatatgatgaaaatagtgca 18555397  T
Q  134 cagaggtcagtaggg 148  Q
    ||| |||||| ||||    
T  18555398 caggggtcagcaggg 18555412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 52872793 - 52872854
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatg 62  Q
    ||||||||||||  ||| | ||||| ||||||||||   |||||||||||||||||||||||    
T  52872793 actggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatg 52872854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3515449 - 3515385
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||| ||||||||||||||||||||||    
T  3515449 actggtattgatcggtacaaaattggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 3515385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 7640907 - 7640963
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  7640907 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 7640963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 12778404 - 12778460
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatg 58  Q
    |||||||||||  ||| ||||||| ||||||||||   |||||||||||||||||||    
T  12778404 ctggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatg 12778460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 15118073 - 15118129
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  15118073 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 15118129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19858020 - 19857956
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||| ||||||    
T  19858020 actggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtatgtatgtta 19857956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29267795 - 29267739
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  29267795 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 29267739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 44772804 - 44772868
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||| ||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  44772804 actggtatttattggtagagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 44772868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 3e-50; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 29 - 217
Target Start/End: Complemental strand, 27851863 - 27851675
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| | ||||||||||||||  ||||||||||||||||| |||| ||||||||  ||||||||| ||||||||||| ||||| |||||||||| ||    
T  27851863 ttaggtgccctcacgaaagttgtatatatggatgttatctgtccctaggctttggaggtactcgatttaagcacatagaactcaagttatgatcaaatta 27851764  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtttcgaatt 217  Q
     ||||||| |||||| |||||||| ||| ||||| |||||| ||||||| |||||||| |||||||||||||||||||||||| |||||    
T  27851763 ctacacaggggtcagcagggatcagcacagtcgtcctcttttcccgagcataggaaaatcaacttttctggaattttctgttttgaatt 27851675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 20733639 - 20733817
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| | |||||||| |||||||||| ||||||||||| ||||| |||||||||| ||    
T  20733639 ttaggtgccttcacgaaagttgtagatatggatgttatctgtcactcggctttggaggcactcgatttaagcacatagaactcaagttatgatcaaatta 20733738  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttct 207  Q
     ||||||  |||||| |||||||| ||| ||||| |||||| ||||||| | |||||| ||| ||||||||||||||||    
T  20733739 ctacacatgggtcagcagggatcagcacagtcgtcctcttttcccgagcattggaaaatcaatttttctggaattttct 20733817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1598498 - 1598434
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  1598498 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 1598434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 25535849 - 25535785
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  25535849 actggtattgattggtagagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 25535785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 19005784 - 19005722
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||| |||| ||||||| ||||||||||   ||| ||||||||||||||||||||||    
T  19005784 tggtattgattagtacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 19005722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1885 - 1949
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  1885 actggtattgattggtacataattggtcttaggtgtacacacgaaagttgtaggtatggatgtta 1949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 8844 - 8908
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  8844 actggtattgattggtacataattggtcttaggtgtacacacgaaagttgtaggtatggatgtta 8908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1540632 - 1540688
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||||||||||| ||||||||||   ||||||||||||||||||    
T  1540632 actggtattgattggtatagaattggtcttaggtgtaaacacgaaagttgtaggtat 1540688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12742759 - 12742703
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||||||||||| ||||||||||   ||||||||||||||||||    
T  12742759 actggtattgattggtatagaattggtcttaggtgtaaacacgaaagttgtaggtat 12742703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17883218 - 17883282
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| |||| |||||   ||||||||||||||||||||||||||    
T  17883218 actggtattgattggtacagaattggtctttggtgtaaacacgaaagttgtaggtatggatgtta 17883282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23415406 - 23415342
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||  ||||||||||   ||||||||||||||||||||||||||    
T  23415406 actggtattgattggtacagaatttgtcttaggtgtaaacacgaaagttgtaggtatggatgtta 23415342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 26924365 - 26924425
Alignment:
Q  5 gtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  26924365 gtattgattggtacagaattgttcttaggtgtaaacacgaaagttgtaggtatggatgtta 26924425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30676430 - 30676494
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  30676430 actggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 30676494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 34963815 - 34963751
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   || |||||||||||||||||||||||    
T  34963815 actggtattgattggtacagaattggtcttaggtgtaaacatgaaagttgtaggtatggatgtta 34963751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 18914759 - 18914704
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    |||||||||||||||  ||||||| ||||||||||   ||||||||||||||||||    
T  18914759 ctggtattgataagtccagaattggtcttaggtgtaaacacgaaagttgtaggtat 18914704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 23992861 - 23992802
Alignment:
Q  4 ggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgt 63  Q
    |||||||||| ||  ||||||| ||||||||||   ||||||||||||||||||||||||    
T  23992861 ggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgt 23992802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 31630069 - 31630132
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||||||| | | ||| ||||||||||   |||||||||||||| |||||||||||    
T  31630069 ctggtattgataagtacatagttggtcttaggtgtaaacacgaaagttgtagttatggatgtta 31630132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 17377586 - 17377632
Alignment:
Q  19 agaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  17377586 agaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 17377632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 19545722 - 19545836
Alignment:
Q  34 tgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaatattaca 133  Q
    |||||||| |||||| |||| ||| ||||||| || ||||||||||||||||  |||| |||| || |  || || ||||| |||||| |||||| | ||    
T  19545722 tgtcttcatgaaagtggtagatatcgatgttagctttcactagcctttggagggactctatttaagtatctataactcaagatatgatgaaaatagtgca 19545821  T
Q  134 cagaggtcagtaggg 148  Q
    ||| |||||| ||||    
T  19545822 caggggtcagcaggg 19545836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 15892129 - 15892190
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatg 62  Q
    ||||||||||||  ||| | ||||| ||||||||||   |||||||||||||||||||||||    
T  15892129 actggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatg 15892190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 93 - 157
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||   ||| | ||||| |||||||||| | ||||||||||| ||||||||||||||    
T  93 actggtattgagttgtacaaaattggtcttaggtgtatacacgaaagttgaaggtatggatgtta 157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8055471 - 8055415
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  8055471 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 8055415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18334313 - 18334369
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  18334313 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 18334369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18914567 - 18914503
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||||| ||||    
T  18914567 actggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggaagtta 18914503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24422988 - 24422932
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  24422988 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 24422932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 25689137 - 25689073
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||| ||||||||||||||||||||||    
T  25689137 actggtattgattggtacaaaattggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 25689073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 33862235 - 33862179
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  33862235 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 33862179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 33864719 - 33864663
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  33864719 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 33864663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 29 - 210
Target Start/End: Original strand, 22237445 - 22237627
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| ||||||||||||||||| |||| ||||||| ||||||| | |||||||| ||||| |||||||||||||||| ||||| |||||||||| ||    
T  22237445 ttaggtgccttcacgaaagttgtagatatgaatgttatttgtcactcggctttggaggcactcaatttgagcacatagaactcaagatatgatcaaatta 22237544  T
Q  129 ttacaca-gaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
     |||||| | |||||| |||||||| ||| ||||| |||||| ||||||| |||||||| |||||||||||||||||||||||    
T  22237545 ctacacagggggtcagcagggatcagcacagtcgtcctcttttcccgagcataggaaaatcaacttttctggaattttctgtt 22237627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 29 - 210
Target Start/End: Original strand, 19807789 - 19807970
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| |||| | |||||||||| |||||||||||||||||||| | |||||||| |||||||||| |||||| |||| ||||| |||||||||| ||    
T  19807789 ttaggtgccttcgcaaaagttgtagatatggatgttatctgtcactcggctttggaggcactcgatttaagcacaaagaactcaagatatgatcaaatta 19807888  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
     ||||||  |||||| |||||||| ||| ||||| |||||| ||||||| |||||||| |||||||||||||||||||||||    
T  19807889 ctacacaagggtcagcagggatcagcacagtcgtcctcttttcccgagcataggaaaatcaacttttctggaattttctgtt 19807970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 29 - 210
Target Start/End: Original strand, 21321542 - 21321713
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||   |||||| ||||||||||  |||||||||| ||||| |||||||||| ||    
T  21321542 ttaggtgccttcacgaaagttgtagatatagatgttatctgtcactaggaattggaggcactcgatttaggcacatagaactcaagttatgatcaaatta 21321641  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
     ||||||| ||||||          ||| ||||| |||||| ||||||| |||||||| |||||||||||||||||||||||    
T  21321642 ctacacaggggtcag----------cacagtcgtcctcttttcccgagcataggaaaatcaacttttctggaattttctgtt 21321713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 21326140 - 21326254
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| ||||||||||||||||| ||| ||||||||||||||||||   |||||| ||||||||||  |||||||||| ||||| |||||||||| ||    
T  21326140 ttaggtgccttcacgaaagttgtagatatagatgttatctgtcactaggaattggaggcactcgatttaggcacatagaactcaagttatgatcaaatta 21326239  T
Q  129 ttacacagaggtcag 143  Q
     ||||||| ||||||    
T  21326240 ctacacaggggtcag 21326254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32122363 - 32122299
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||||||||||| ||||||||||   ||||||||||||||||||||||||||    
T  32122363 actggtattgattggtatagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 32122299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14824216 - 14824152
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||||||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  14824216 actggtattgattggtatagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 14824152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15071195 - 15071131
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||||||||||| ||   ||||||||||||||||||||||||||    
T  15071195 actggtattgatcggtaaagaattgatcttaggggtaaacacgaaagttgtaggtatggatgtta 15071131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 38549341 - 38549404
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||| ||||||| ||||||||||   ||||||||||||| ||||||||||||    
T  38549341 ctggtattgataggtacagaattggtcttaggtgtaaacacgaaagttgtatgtatggatgtta 38549404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15202706 - 15202770
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||| |||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  15202706 actgatattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 15202770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16198336 - 16198276
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggat 61  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||    
T  16198336 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggat 16198276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 19896956 - 19896892
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  19896956 actggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 19896892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19936628 - 19936692
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  19936628 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 19936692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 38549532 - 38549596
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| |||||||||||||||| |   |||| |||||||||||||||||||||    
T  38549532 actggtattgattggtacagaattgatcttaggtataaacacggaagttgtaggtatggatgtta 38549596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 32810333 - 32810274
Alignment:
Q  6 tattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||| ||  ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  32810333 tattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 32810274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 16412845 - 16412907
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||  ||| |||| || ||||||||||   ||||||||||||||||||||||||||    
T  16412845 tggtattgattggtacagaactggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 16412907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 24049243 - 24049181
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||| ||  ||||||| ||||||||||   |||||||||| |||||||||||||||    
T  24049243 tggtattgataggtccagaattggtcttaggtgtaaacacgaaagttataggtatggatgtta 24049181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 1484843 - 1484787
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  1484843 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 1484787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 4542094 - 4542150
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  4542094 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 4542150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 5853013 - 5853069
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  5853013 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 5853069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14397461 - 14397525
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   |||||||| |||||||||| ||||||    
T  14397461 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagctgtaggtatgaatgtta 14397525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 14409165 - 14409221
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  14409165 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 14409221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 15071002 - 15070938
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| |||||||| |   ||||||||||||||||||||||||||    
T  15071002 actggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgtta 15070938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15202899 - 15202963
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||| ||||||||||||||| ||||||    
T  15202899 actggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatgaatgtta 15202963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 16401472 - 16401516
Alignment:
Q  21 aattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||| ||||||||||   ||||||||||||||||||||||||||    
T  16401472 aattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 16401516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16413036 - 16413100
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||||| ||||||||||||||||||||    
T  16413036 actggtattgattggtacataattggtcttaggtgtaaacacgacagttgtaggtatggatgtta 16413100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 18677785 - 18677849
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| |||||||| |   ||||||||||||||||||||||||||    
T  18677785 actggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgtta 18677849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 20045916 - 20045972
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  20045916 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 20045972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24049052 - 24048988
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||| ||||||||||||||||||||||    
T  24049052 actggtattgattggtacataattggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 24048988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24485764 - 24485828
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| |||| |||||   ||||||||||||||||||| ||||||    
T  24485764 actggtattgattggtacagaattggtcttgggtgtaaacacgaaagttgtaggtatgaatgtta 24485828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 27471964 - 27472008
Alignment:
Q  21 aattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||| ||||||||||   ||||||||||||||||||||||||||    
T  27471964 aattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 27472008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27472137 - 27472201
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| |||||| |||   ||||||||||||||||||||||||||    
T  27472137 actggtattgattggtacataattggtcttagctgtaaacacgaaagttgtaggtatggatgtta 27472201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32122170 - 32122106
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||| |||||||  ||| ||||||| ||||||||||   |||||| |||||||||||||||||||    
T  32122170 actgatattgattggtacagaattgttcttaggtgtaaacacgaatgttgtaggtatggatgtta 32122106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 45290268 - 45290332
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||| ||||||||||||||||||||||    
T  45290268 actggtattgattggtacaaaattggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 45290332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 5e-46; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 29 - 210
Target Start/End: Complemental strand, 27473113 - 27472932
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| |||||||||| |||||| |||||||||||||||||||| | |||||||| |||| ||||| ||||||||||| || || |||||||||| ||    
T  27473113 ttaggtgccttcacgaaatttgtagatatggatgttatctgtcactcggctttggaggcacttgatttaagcacatagaactctagatatgatcaaatta 27473014  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
     ||||||| |||||| |||| ||| ||| ||||| |||||| ||||||| |||||||| |||||||||||||||||||||||    
T  27473013 ctacacaggggtcagcaggggtcagcacagtcgtcctcttttcccgagcataggaaaatcaacttttctggaattttctgtt 27472932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 210
Target Start/End: Complemental strand, 20915965 - 20915784
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| |||||| |||||||||| |||||||||||| ||||||| | ||||| || |||||||||| ||||||||||| ||||| |||||||||| ||    
T  20915965 ttaggtgccttcacaaaagttgtagatatggatgttatgtgtcactcggctttgcaggcactcgatttaagcacatagaactcaagatatgatcaaatta 20915866  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
     |||| || |||||| |||||||| ||| ||||| |||||| ||||||| |||||||| |||||||| ||||||||| ||||    
T  20915865 ctacataggggtcagcagggatcagcacagtcgtcctcttttcccgagcataggaaaatcaacttttttggaattttatgtt 20915784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 210
Target Start/End: Original strand, 34858587 - 34858758
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| |||||  |||||||||  |||||||||||||||||||| | |||| ||| |||||||||| ||||||||||| ||||| |||||||||| ||    
T  34858587 ttaggtgccttcataaaagttgtacatatggatgttatctgtcactcggcttttgaggcactcgatttaagcacatagaactcaagatatgatcaaatta 34858686  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
     ||||||| ||||||          |||  |||| || |||  |||||| |||||||| |||||||||||||||||||||||    
T  34858687 ctacacaggggtcag----------cacaatcgtcctttttttccgagcataggaaaatcaacttttctggaattttctgtt 34858758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 210
Target Start/End: Original strand, 34873649 - 34873820
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| |||||  |||||||||  |||||||||||||||||||| | |||| ||| |||||||||| ||||||||||| ||||| |||||||||| ||    
T  34873649 ttaggtgccttcataaaagttgtacatatggatgttatctgtcactcggcttttgaggcactcgatttaagcacatagaactcaagatatgatcaaatta 34873748  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
     ||||||| ||||||          |||  |||| || |||  |||||| |||||||| |||||||||||||||||||||||    
T  34873749 ctacacaggggtcag----------cacaatcgtcctttttttccgagcataggaaaatcaacttttctggaattttctgtt 34873820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 23932094 - 23932031
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||  ||||||||||| ||||||||||   ||||||||||||||||||||||||||    
T  23932094 ctggtattgattggtatagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 23932031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 142
Target Start/End: Original strand, 22497683 - 22497797
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    |||||| |||||| ||||||||||| |||| |||||| || |||||| |||||||||  |||| |||| ||||  ||||| ||||| |||| ||||||||    
T  22497683 ttaggtatcttcatgaaagttgtagatatgaatgttagctttcactatcctttggagggactccatttaagcatctagaactcaagatatggtcaaaata 22497782  T
Q  129 -ttacacagaggtca 142  Q
     |||||||| |||||    
T  22497783 cttacacaggggtca 22497797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 24918774 - 24918708
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgttatct 68  Q
    |||||||||||| ||  ||||||| ||||||||||   |||||||||||||||||||||||||||||    
T  24918774 ctggtattgataggtcaagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgttatct 24918708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 20261661 - 20261597
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  20261661 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 20261597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 21154346 - 21154406
Alignment:
Q  5 gtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||| || |||||||| ||||||||||   ||||||||||||||||||||||||||    
T  21154346 gtattgataggtctagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 21154406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 23706554 - 23706617
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||  ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  23706554 ctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 23706617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41523600 - 41523667
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgttatct 68  Q
    ||||||||||||  ||| ||||||| ||||||||||   |||||| ||||||||||||||||||||||    
T  41523600 actggtattgattggtacagaattggtcttaggtgtaaacacgaaggttgtaggtatggatgttatct 41523667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 21554510 - 21554552
Alignment:
Q  28 cttaggtgtcttcacgaaagttgtaggtatggatgttatctgt 70  Q
    |||||||||||||| ||||||||||||||| ||||||||||||    
T  21554510 cttaggtgtcttcatgaaagttgtaggtattgatgttatctgt 21554552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10684483 - 10684547
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||   || ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  10684483 actggtattgattgatacagaattggtcttaggtgtaagcacgaaagttgtaggtatggatgtta 10684547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21154535 - 21154599
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||   |||||||||| || |||||||   ||||||||||||||||||||||||||    
T  21154535 actggtattgattgttatagaattggtcctaggtgtaaacacgaaagttgtaggtatggatgtta 21154599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22105907 - 22105843
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||  ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  22105907 actggtattgattggtgcagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 22105843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 22497602 - 22497654
Alignment:
Q  33 gtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggag 85  Q
    ||||||||| ||||||||||| ||||| ||||| || ||||||||||||||||    
T  22497602 gtgtcttcatgaaagttgtagatatggttgttagctttcactagcctttggag 22497654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24368268 - 24368204
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  24368268 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 24368204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 26505820 - 26505764
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||||||||||||||   ||||||||||||||||||    
T  26505820 actggtattgattggtacagaattgatcttaggtgtaaacacgaaagttgtaggtat 26505764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 45027625 - 45027689
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  45027625 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 45027689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 6726677 - 6726618
Alignment:
Q  6 tattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||| ||  ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  6726677 tattgataggtcaagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 6726618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 23652364 - 23652409
Alignment:
Q  20 gaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||| | ||||| |||||| |||||||||||||||||||||||    
T  23652364 gaattgagcctaggtatcttcatgaaagttgtaggtatggatgtta 23652409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 18809384 - 18809328
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  18809384 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 18809328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 18985702 - 18985746
Alignment:
Q  104 tagaattcaagctatgatcaaaatattacacagaggtcagtaggg 148  Q
    ||||| ||||| ||||||||||||| |||||||||||||| ||||    
T  18985702 tagaaatcaagatatgatcaaaatactacacagaggtcagcaggg 18985746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 22106100 - 22106036
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||| ||||||||||||||||||||||    
T  22106100 actggtattgattggtacaaaattggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 22106036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23131304 - 23131240
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| |||||||| |   ||||||||||||||||||||||||||    
T  23131304 actggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgtta 23131240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 23133771 - 23133707
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| |||||||| |   ||||||||||||||||||||||||||    
T  23133771 actggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgtta 23133707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 23706937 - 23707001
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||| |||||||  ||| ||||||| ||||||||||   ||| ||||||||||||||||||||||    
T  23706937 actgatattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 23707001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23711734 - 23711790
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  23711734 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 23711790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 24529094 - 24529138
Alignment:
Q  21 aattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||| ||||||||||   ||||||||||||||||||||||||||    
T  24529094 aattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 24529138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24642469 - 24642533
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   | | ||||||||||||||||||||||    
T  24642469 actggtattgattggtacagaattgctcttaggtgtaaacccaaaagttgtaggtatggatgtta 24642533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24671467 - 24671403
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||| ||  ||| ||||||| ||||||||||    |||||||||||||||||||||||||    
T  24671467 actggtatttattggtacagaattggtcttaggtgtaaaaacgaaagttgtaggtatggatgtta 24671403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 24681886 - 24681822
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||| |  ||| ||||||| |||||| |||   ||||||||||||||||||||||||||    
T  24681886 actggtattggttggtacagaattggtcttagctgtaaacacgaaagttgtaggtatggatgtta 24681822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 26508298 - 26508242
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  26508298 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 26508242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28577540 - 28577476
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||| |||||||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  28577540 actgatattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 28577476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 32214457 - 32214521
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| |||||||||    ||||||||||||||||||||||||||    
T  32214457 actggtattgattggtacaaaattggtcttaggtgataacacgaaagttgtaggtatggatgtta 32214521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 32214651 - 32214715
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||| ||||||||||||||||||||||    
T  32214651 actggtattgattggtacaaaattgttcttaggtgtaaacacaaaagttgtaggtatggatgtta 32214715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 34402242 - 34402306
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| |||||||| |   ||||||||||||||||||||||||||    
T  34402242 actggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgtta 34402306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 39682755 - 39682699
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  39682755 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 39682699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 41523793 - 41523857
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||  ||||||||||   ||||||||||||||||||| ||||||    
T  41523793 actggtattgattggtacagaattagtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 41523857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 13285 - 13113
Alignment:
Q  38 ttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaatattacacaga 137  Q
    |||||||||||||||| |||||||||||||||||||| |  ||||||| |||||||||| |||||||||||  |||| |||||||||| || |||||||     
T  13285 ttcacgaaagttgtagatatggatgttatctgtcactcgtgtttggaggcactcgatttaagcacatagaacacaagatatgatcaaattactacacagg 13186  T
Q  138 ggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
    |||||| |||||||| ||| ||||| |||||| ||||||| |||||||| |||||||||||||||| ||||||    
T  13185 ggtcagcagggatcagcacagtcgtcctcttttcccgagcataggaaaatcaacttttctggaattgtctgtt 13113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 37 - 210
Target Start/End: Complemental strand, 1587 - 1414
Alignment:
Q  37 cttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaatattacacag 136  Q
    ||||||||||||||||| ||| |||||||||||||||| | |||| ||| ||||| |||| ||||||||||| ||||| |||||||||| || |||||||    
T  1587 cttcacgaaagttgtagatatagatgttatctgtcactcggctttagaggcactcaatttaagcacatagaactcaagatatgatcaaattactacacag 1488  T
Q  137 aggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
      ||||| |||||||| ||| ||||| |||||| | ||||| |||||||| |||||||||||||||||||||||    
T  1487 gagtcagcagggatcagcacagtcgtcctcttttcgcgagcataggaaaatcaacttttctggaattttctgtt 1414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 38380 - 38440
Alignment:
Q  5 gtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||  ||| |||||||||||||||  |   ||||||||||||||||||||||||||    
T  38380 gtattgatccgtaaagaattgatcttagggctaaacacgaaagttgtaggtatggatgtta 38440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 29 - 210
Target Start/End: Complemental strand, 1096 - 915
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||  ||||||||| ||||||||||| ||||| |||||||||| ||    
T  1096 ttaggtgtcttcacgaaagttgtagacatggatgttatctgtcactcggctttggaggaactcgatttaagcacatagaactcaagatatgatcaaatta 997  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
     |||| ||   |||| |||||||| ||| |||||  ||||| ||||||| |||||||| ||||||||||||| || ||||||    
T  996 ctacaaaggaatcaggagggatcagcacagtcgtcttcttttcccgagcataggaaaatcaacttttctggatttctctgtt 915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 29 - 210
Target Start/End: Complemental strand, 67954 - 67773
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    ||||||| ||||||||||||||||  |||||||| ||||||||||| | |||||||| |||||||||| ||||||||||| ||||| ||| |||||| ||    
T  67954 ttaggtgccttcacgaaagttgtatatatggatgatatctgtcactcggctttggaggcactcgatttaagcacatagaactcaagatataatcaaatta 67855  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtt 210  Q
     ||||||| |||||| |||||||| ||| ||||  |||||| ||||||| |||||||| | |||||| || |||||||||||    
T  67854 ctacacaggggtcagcagggatcagcacagtcgccctcttttcccgagcataggaaaatccacttttatgaaattttctgtt 67773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 217
Target Start/End: Complemental strand, 24564618 - 24564432
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    |||||||| ||||| |||||||||| |||||||||||  | |||| | |||||| ||  ||||||||| ||||  ||||||||||  |||||||||||||    
T  24564618 ttaggtgtattcacaaaagttgtagatatggatgttagtt-tcaccaacctttgaagggactcgatttaagcatctagaattcaatatatgatcaaaata 24564520  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtttcgaatt 217  Q
     ||||||| | ||||  ||||||| || ||| ||||| ||| ||| ||| |||||||| ||||||||||   ||| |||||||||||||    
T  24564519 ctacacagggatcagctgggatcagcaaggttgtgct-ttttccctagcctaggaaaatcaacttttctaccattctctgtttcgaatt 24564432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 217
Target Start/End: Complemental strand, 24605653 - 24605467
Alignment:
Q  29 ttaggtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaata 128  Q
    |||||||| ||||| |||||||||| |||||||||||  | |||| | |||||| ||  ||||||||| ||||  ||||||||||  |||||||||||||    
T  24605653 ttaggtgtattcacaaaagttgtagatatggatgttagtt-tcaccaacctttgaagggactcgatttaagcatctagaattcaatatatgatcaaaata 24605555  T
Q  129 ttacacagaggtcagtagggatcaacacggtcgtgctctttccccgagcttaggaaaaccaacttttctggaattttctgtttcgaatt 217  Q
     ||||||| | ||||  ||||||| || ||| ||||| ||| ||| ||| |||||||| ||||||||||   ||| |||||||||||||    
T  24605554 ctacacagggatcagctgggatcagcaaggttgtgct-ttttccctagcctaggaaaatcaacttttctaccattctctgtttcgaatt 24605467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 25581933 - 25582047
Alignment:
Q  34 tgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaatattaca 133  Q
    |||||||| ||||||||||| |||||||||||  | ||||||||||||||||  |||| |||| || |  ||||| ||||| |||||| |||||| ||||    
T  25581933 tgtcttcatgaaagttgtagatatggatgttacatttcactagcctttggagggactctatttaagtatctagaactcaagatatgatgaaaatactaca 25582032  T
Q  134 cagaggtcagtaggg 148  Q
     || |||||| ||||    
T  25582033 taggggtcagcaggg 25582047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 134
Target Start/End: Original strand, 25581741 - 25581842
Alignment:
Q  33 gtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaatattac 132  Q
    ||||| ||| ||||||||||  |||||||||||||| ||||| |||||||||   ||||||||| |||   ||||| || || |||||||||||||||||    
T  25581741 gtgtcatcatgaaagttgtatatatggatgttatctttcactcgcctttggattgactcgatttaagcgtctagaactctagatatgatcaaaatattac 25581840  T
Q  133 ac 134  Q
    ||    
T  25581841 ac 25581842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17516884 - 17516948
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  17516884 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 17516948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 2154160 - 2154223
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||  ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  2154160 ctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 2154223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 32028273 - 32028210
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||  ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  32028273 ctggtattgataggtcaagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 32028210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 295995 - 296059
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||| |||||||  ||| ||||||| |||||||||| | ||| ||||||||||||||||||||||    
T  295995 actgatattgattggtacagaattggtcttaggtgtatacacaaaagttgtaggtatggatgtta 296059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 20901641 - 20901705
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   || |||||||||||||||||||||||    
T  20901641 actggtattgattggtacagaattggtcttaggtgtaaacatgaaagttgtaggtatggatgtta 20901705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 20917567 - 20917631
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  20917567 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 20917631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29330424 - 29330360
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  29330424 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 29330360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 29330616 - 29330553
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||  ||||||| ||||||||||   ||| ||||||||||||||||||||||    
T  29330616 ctggtattgataggtcaagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 29330553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 32028659 - 32028596
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||  | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  32028659 ctggtattgataggtcaaaaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 32028596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 17516501 - 17516562
Alignment:
Q  4 ggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  17516501 ggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 17516562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 20917377 - 20917438
Alignment:
Q  4 ggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||| ||  | ||||||||||||||||   ||||||||||||||||||| ||||||    
T  20917377 ggtattgataggtccataattgatcttaggtgtaaacacgaaagttgtaggtatgaatgtta 20917438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 13938549 - 13938509
Alignment:
Q  157 ggtcgtgctctttccccgagcttaggaaaaccaacttttct 197  Q
    ||||||||||||||||| |||||||||||| |||| |||||    
T  13938549 ggtcgtgctctttccccaagcttaggaaaatcaacatttct 13938509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29346421 - 29346365
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  29346421 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 29346365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29348894 - 29348838
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  29348894 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 29348838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29351367 - 29351311
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  29351367 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 29351311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 32027887 - 32027823
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   || |||||||||||||||| ||||||    
T  32027887 actggtattgattggtacagaattggtcttaggtgtaaacaagaaagttgtaggtatgaatgtta 32027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 38619878 - 38619814
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| |||||||| |   ||||||||||||||||||||||||||    
T  38619878 actggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgtta 38619814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 39363826 - 39363762
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| |||||||| |   ||||||||||||||||||||||||||    
T  39363826 actggtattgattggtacataattggtcttaggtataaacacgaaagttgtaggtatggatgtta 39363762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 1150 - 1259
Alignment:
Q  33 gtgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaatattac 132  Q
    ||||||||| |||||||| || |||||||| ||||| ||||||||||||||||  ||||||||| |||   ||||| || |  ||||||||| |||||||    
T  1150 gtgtcttcatgaaagttgcagatatggatggtatctttcactagcctttggagtgactcgatttaagcgtctagaaatctatatatgatcaatatattac 1249  T
Q  133 acagaggtca 142  Q
    |||| |||||    
T  1250 acaggggtca 1259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 1342 - 1456
Alignment:
Q  34 tgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaatattaca 133  Q
    |||||||| ||||||||||| |||||||||||  | ||| |||||||| |||  |||| |||| || |  ||||| ||||  |||||| |||||| ||||    
T  1342 tgtcttcatgaaagttgtagatatggatgttaaatttcagtagcctttagagggactctatttaagtatctagaactcaatatatgatgaaaatagtaca 1441  T
Q  134 cagaggtcagtaggg 148  Q
    ||| |||||| ||||    
T  1442 caggggtcagcaggg 1456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8181 - 8117
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| |||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  8181 actggtattgattagtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 8117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6893 - 6829
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  6893 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 6829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 7081 - 7022
Alignment:
Q  6 tattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  7081 tattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 7022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15859523 - 15859587
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| |||||||||| | ||||||||||||||||||| ||||||    
T  15859523 actggtattgattggtacagaattggtcttaggtgtatacacgaaagttgtaggtatgaatgtta 15859587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 15859729 - 15859793
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  15859729 actggtattgattggtacagaattggtcttaggtgtaagcacgaaagttgtaggtatggatgtta 15859793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29777182 - 29777118
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||  |||||||||||||||||||||||||||    
T  29777182 actggtattgattggtacataattggtcttaggtgtaatcacgaaagttgtaggtatggatgtta 29777118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 43543343 - 43543279
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  43543343 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 43543279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 22050558 - 22050621
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||  ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  22050558 ctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 22050621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 29298875 - 29298812
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||  ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  29298875 ctggtattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 29298812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 16274976 - 16275040
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  16274976 actggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 16275040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16401556 - 16401492
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||| ||||||||||||||||||||||    
T  16401556 actggtattgatcggtacagaattggtcttaggtgtagacacaaaagttgtaggtatggatgtta 16401492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 21841208 - 21841144
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  21841208 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 21841144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 16274784 - 16274847
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||| |||||| ||  ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  16274784 ctggtgttgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 16274847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 31613191 - 31613129
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||| ||  | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  31613191 tggtattgataggttcataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 31613129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 40129524 - 40129462
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||| ||  ||||||||||||||||||   ||| ||||||||||||||| ||||||    
T  40129524 tggtattgataggtccagaattgatcttaggtgtaaacactaaagttgtaggtatgaatgtta 40129462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 22122735 - 22122796
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatg 62  Q
    ||||||||||||| ||  ||||||| ||||||||||   || ||||||||||||||||||||    
T  22122735 actggtattgataggtccagaattggtcttaggtgtaaacatgaaagttgtaggtatggatg 22122796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 27161310 - 27161371
Alignment:
Q  4 ggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  27161310 ggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 27161371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 9044725 - 9044789
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||  ||||||||||   ||||||||||||||||||| ||||||    
T  9044725 actggtattgatcggtacagaattagtcttaggtgtaaacacgaaagttgtaggtatgtatgtta 9044789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13227305 - 13227241
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   |||||||||| || ||||||||||||    
T  13227305 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttttatgtatggatgtta 13227241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 13989307 - 13989251
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  13989307 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 13989251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 16362360 - 16362296
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| |||| |||||   ||||||||||||||||||||| ||||    
T  16362360 actggtattgattggtacagaattggtcttgggtgtaaacacgaaagttgtaggtatggaagtta 16362296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 21923012 - 21923068
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  21923012 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 21923068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 27161118 - 27161178
Alignment:
Q  5 gtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||| ||  ||||||| ||||||||||   || |||||||||||||||||||||||    
T  27161118 gtattgataggtccagaattggtcttaggtgtaaacaggaaagttgtaggtatggatgtta 27161178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 29298683 - 29298619
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||| ||||||    
T  29298683 actggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 29298619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 31343752 - 31343712
Alignment:
Q  28 cttaggtgtcttcacgaaagttgtaggtatggatgttatct 68  Q
    |||||||||||||| ||||||| ||| ||||||||||||||    
T  31343752 cttaggtgtcttcatgaaagttatagatatggatgttatct 31343712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 31612807 - 31612743
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  |||  |||||| ||||||||||   ||||||||||||||||||| ||||||    
T  31612807 actggtattgattggtaccgaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 31612743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31613000 - 31612940
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggat 61  Q
    ||||||||||||  ||||||||||| ||||||||||   ||| |||||| |||||||||||    
T  31613000 actggtattgattggtatagaattggtcttaggtgtaaacactaaagttataggtatggat 31612940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 14263 - 14164
Alignment:
Q  43 gaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaatattacacagaggtca 142  Q
    ||||||||||  |||||||||||||| |||||| |||||||||  ||||||||| |||   || || || || ||||||||||||| ||||||| |||||    
T  14263 gaaagttgtatatatggatgttatctttcactaacctttggagtgactcgatttaagcgtctataactctagatatgatcaaaatactacacaggggtca 14164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 148
Target Start/End: Complemental strand, 14079 - 13967
Alignment:
Q  36 tcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaatattacaca 135  Q
    |||||| ||||||||||| |||||||  ||  | ||||||||||||||||| |||| ||||  | |  || || ||||| |||||| |||||| ||||||    
T  14079 tcttcatgaaagttgtagatatggattctagatttcactagcctttggagagactctatttaggtatctataactcaagatatgatgaaaatactacaca 13980  T
Q  136 gaggtcagtaggg 148  Q
    ||| |||| ||||    
T  13979 gagatcagcaggg 13967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 6658 - 6720
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  6658 tggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 6720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 6465 - 6527
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||| ||  ||||||| |||||| |||   ||||||||||||||||||||||||||    
T  6465 tggtattgataggtccagaattggtcttagctgtaaacacgaaagttgtaggtatggatgtta 6527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 11062 - 11124
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  11062 tggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 11124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 10869 - 10931
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||| ||  ||||||| |||||| |||   ||||||||||||||||||||||||||    
T  10869 tggtattgataggtccagaattggtcttagctgtaaacacgaaagttgtaggtatggatgtta 10931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5136 - 5072
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  5136 actggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 5072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8460 - 8396
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||| |||||||  ||||||||||| ||||||||||   || |||||||||||||||||||||||    
T  8460 actgatattgattggtatagaattgctcttaggtgtaaacatgaaagttgtaggtatggatgtta 8396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18572 - 18508
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||| ||||||||||||||||||||||    
T  18572 actggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 18508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 19809 - 19873
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||||||||||| ||||||||||   | | ||||||||||||||||||||||    
T  19809 actggtattgattggtatagaattggtcttaggtgtaaacgcaaaagttgtaggtatggatgtta 19873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18095 - 18031
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||| ||||||||||||||||||||||    
T  18095 actggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 18031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30654 - 30590
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  30654 actggtattgattggtacataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 30590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 33613 - 33549
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||| ||||||||||||||||||||||    
T  33613 actggtattgattggtacagaattggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 33549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10426 - 10362
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||| |||||  ||||||||||||||||||||||||||    
T  10426 actggtattgattggtacataattggtcttatgtgtcaacacgaaagttgtaggtatggatgtta 10362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 10618 - 10555
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||  | ||||| ||||||||||   ||||||||||||||||||||||||||    
T  10618 ctggtattgataggtccataattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 10555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 94852 - 94788
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  94852 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 94788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 17164 - 17216
Alignment:
Q  5 gtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||  ||||||||||| ||||||||||   ||||||||||||||||||    
T  17164 gtattgattggtatagaattggtcttaggtgtaaacacgaaagttgtaggtat 17216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 1888 - 1825
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||  ||||||| ||||||||||   || |||||||||||||||||||||||    
T  1888 ctggtattgataggtccagaattggtcttaggtgtaaacaagaaagttgtaggtatggatgtta 1825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 1694 - 1634
Alignment:
Q  3 tggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgt 63  Q
    ||||||||||  ||| | ||||| ||||||||||   ||||||||||||||||||||||||    
T  1694 tggtattgattggtacaaaattggtcttaggtgtaaacacgaaagttgtaggtatggatgt 1634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 1338 - 1279
Alignment:
Q  6 tattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||| ||  ||||||| ||||||||||   ||||||||||||||||||||||||||    
T  1338 tattgataggtccagaattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 1279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1224 - 1160
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| | ||||| ||||||||||   ||| ||||||||||||||||||||||    
T  1224 actggtattgattggtacataattggtcttaggtgtaaacacaaaagttgtaggtatggatgtta 1160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 501698 - 501635
Alignment:
Q  2 ctggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    |||||||||||| ||  |||| || ||||||||||   ||||||||||||||||||||||||||    
T  501698 ctggtattgataggtcaagaactggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 501635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1405 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1405
Description:

Target: scaffold1405; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 148
Target Start/End: Complemental strand, 1414 - 1300
Alignment:
Q  34 tgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttggagacactcgatttgagcacatagaattcaagctatgatcaaaatattaca 133  Q
    |||||||  ||||||||||| |||||||||||  | |||||||||||| |||  |||| |||| || |  ||||| ||||  |||||| |||||| ||||    
T  1414 tgtcttcgtgaaagttgtagatatggatgttaaatttcactagcctttagagggactctatttaagtatctagaactcaatatatgatgaaaatactaca 1315  T
Q  134 cagaggtcagtaggg 148  Q
    ||| |||||| ||||    
T  1314 caggggtcagcaggg 1300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 84
Target Start/End: Original strand, 3078 - 3128
Alignment:
Q  34 tgtcttcacgaaagttgtaggtatggatgttatctgtcactagcctttgga 84  Q
    |||||||| ||||||||||| ||| ||||||| || |||||||||||||||    
T  3078 tgtcttcatgaaagttgtagatatcgatgttagctttcactagcctttgga 3128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3637 - 3701
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| |||||| |||   || |||||||||||||||||||||||    
T  3637 actggtattgattggtacagaattggtcttagctgtaaacatgaaagttgtaggtatggatgtta 3701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 3830 - 3894
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| |||||||||    |||||||||||||||||| |||||||    
T  3830 actggtattgattggtacagaattggtcttaggtggaaacacgaaagttgtaggtattgatgtta 3894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7410 - 7474
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||||||  ||| ||||||| |||| |||||   ||| ||||||||||||||||||||||    
T  7410 actggtattgattggtacagaattggtcttgggtgtaaacacaaaagttgtaggtatggatgtta 7474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6388 - 6324
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||| ||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  6388 actggtattcattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 6324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 9683 - 9619
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||||||| ||  ||| ||||||| ||||||||||   ||||||||||||||||||| ||||||    
T  9683 actggtatttattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtatgaatgtta 9619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 12322 - 12366
Alignment:
Q  104 tagaattcaagctatgatcaaaatattacacagaggtcagtaggg 148  Q
    ||||| ||||| ||||||||||||| |||||||||||||| ||||    
T  12322 tagaaatcaagatatgatcaaaatactacacagaggtcagcaggg 12366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38263 - 38207
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  38263 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 38207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31645 - 31589
Alignment:
Q  1 actggtattgataagtatagaattgatcttaggtgtcttcacgaaagttgtaggtat 57  Q
    ||||||||||||  ||| ||||||| ||||||||||   ||||||||||||||||||    
T  31645 actggtattgattggtacagaattggtcttaggtgtaaacacgaaagttgtaggtat 31589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 75645 - 75689
Alignment:
Q  21 aattgatcttaggtgtcttcacgaaagttgtaggtatggatgtta 65  Q
    ||||| ||||||||||   ||||||||||||||||||||||||||    
T  75645 aattggtcttaggtgtaaacacgaaagttgtaggtatggatgtta 75689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University