View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17963_low_17 (Length: 278)

Name: NF17963_low_17
Description: NF17963
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17963_low_17
NF17963_low_17
[»] chr6 (53 HSPs)
chr6 (1-263)||(30059900-30060162)
chr6 (98-263)||(29887296-29887461)
chr6 (98-263)||(28926382-28926547)
chr6 (108-263)||(24730854-24731009)
chr6 (98-239)||(29835238-29835379)
chr6 (98-239)||(29894576-29894717)
chr6 (101-263)||(29073762-29073924)
chr6 (101-263)||(29078526-29078688)
chr6 (101-263)||(29106335-29106497)
chr6 (98-239)||(29866672-29866813)
chr6 (98-263)||(30061830-30061995)
chr6 (108-263)||(24890091-24890246)
chr6 (98-263)||(29211228-29211393)
chr6 (98-260)||(24263587-24263749)
chr6 (98-263)||(29905638-29905803)
chr6 (98-263)||(30126890-30127055)
chr6 (108-263)||(29882434-29882589)
chr6 (108-263)||(29909590-29909745)
chr6 (110-255)||(24886413-24886557)
chr6 (98-263)||(30118576-30118741)
chr6 (108-263)||(29903245-29903400)
chr6 (108-263)||(29357824-29357979)
chr6 (102-261)||(29929274-29929433)
chr6 (108-261)||(29116262-29116415)
chr6 (98-261)||(29085019-29085182)
chr6 (98-263)||(29348433-29348598)
chr6 (98-261)||(29889731-29889894)
chr6 (171-263)||(29898076-29898168)
chr6 (120-255)||(29946444-29946579)
chr6 (140-261)||(29099344-29099465)
chr6 (159-263)||(29366317-29366421)
chr6 (155-263)||(29876824-29876932)
chr6 (163-263)||(30999838-30999938)
chr6 (3-105)||(30061600-30061705)
chr6 (98-226)||(29949732-29949860)
chr6 (169-263)||(24271853-24271947)
chr6 (141-263)||(30149526-30149648)
chr6 (110-263)||(25451117-25451270)
chr6 (165-231)||(16702057-16702123)
chr6 (3-105)||(29866938-29867040)
chr6 (9-105)||(29835504-29835600)
chr6 (9-105)||(29887586-29887682)
chr6 (111-226)||(29953542-29953657)
chr6 (98-156)||(24271799-24271857)
chr6 (146-247)||(30053442-30053543)
chr6 (108-183)||(29912051-29912126)
chr6 (108-183)||(29914071-29914146)
chr6 (164-226)||(15727090-15727152)
chr6 (3-105)||(29894842-29894944)
chr6 (9-82)||(24271578-24271651)
chr6 (3-105)||(30126663-30126765)
chr6 (138-263)||(30135124-30135250)
chr6 (171-263)||(24739103-24739195)
[»] scaffold0573 (1 HSPs)
scaffold0573 (98-263)||(4136-4301)
[»] scaffold0237 (1 HSPs)
scaffold0237 (108-263)||(22342-22497)
[»] chr3 (4 HSPs)
chr3 (144-262)||(24219116-24219234)
chr3 (171-264)||(24226818-24226911)
chr3 (165-235)||(33997967-33998037)
chr3 (98-226)||(16351086-16351214)
[»] chr2 (1 HSPs)
chr2 (124-255)||(15062737-15062868)
[»] chr1 (5 HSPs)
chr1 (153-265)||(10130134-10130246)
chr1 (164-263)||(17251312-17251411)
chr1 (138-263)||(19490249-19490374)
chr1 (164-247)||(41316274-41316358)
chr1 (175-235)||(41198768-41198828)
[»] scaffold0054 (1 HSPs)
scaffold0054 (199-263)||(53532-53596)
[»] scaffold0572 (1 HSPs)
scaffold0572 (164-263)||(3232-3331)
[»] chr7 (1 HSPs)
chr7 (98-226)||(3643073-3643201)
[»] scaffold0014 (3 HSPs)
scaffold0014 (99-247)||(137389-137537)
scaffold0014 (165-261)||(121382-121478)
scaffold0014 (177-247)||(104652-104722)
[»] scaffold0019 (1 HSPs)
scaffold0019 (164-226)||(126024-126086)
[»] scaffold0429 (1 HSPs)
scaffold0429 (164-247)||(6211-6294)
[»] scaffold0051 (2 HSPs)
scaffold0051 (164-263)||(47804-47903)
scaffold0051 (179-247)||(43201-43269)
[»] chr4 (1 HSPs)
chr4 (159-226)||(44262489-44262556)
[»] scaffold0654 (1 HSPs)
scaffold0654 (165-226)||(1122-1183)
[»] chr8 (1 HSPs)
chr8 (146-207)||(9782594-9782655)
[»] scaffold0652 (1 HSPs)
scaffold0652 (165-261)||(1197-1293)
[»] scaffold0110 (1 HSPs)
scaffold0110 (171-263)||(43777-43869)
[»] scaffold0086 (1 HSPs)
scaffold0086 (169-213)||(31220-31264)


Alignment Details
Target: chr6 (Bit Score: 251; Significance: 1e-139; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 30059900 - 30060162
Alignment:
Q  1 tatcatttttatcaaacagagaacgtataattattccgtaagtcacagcatttggatagcaattattgtccttcatttttgatagcaaagccaaggctcc 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30059900 tatcatttttatcaaacagagaacgtataattattctgtaagtcacagcatttggatagcaattattgtccttcatttttgatagcaaagccaaggctcc 30059999  T
Q  101 atcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  30060000 atcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaacctgatggtttttgcat 30060099  T
Q  201 aaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30060100 aaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 30060162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 98 - 263
Target Start/End: Complemental strand, 29887461 - 29887296
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 197  Q
    ||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||  ||||||||||||    
T  29887461 tccatcaataagaatagtgtatgtgtacatatttggtcgaataccctggtctttcaaatttgttaataacgcaattgccttgtcaacctgatggtttttg 29887362  T
Q  198 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    |||||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||| |||||||    
T  29887361 cataaagcatctaataaagaactgtaagtaattatatcaggtggttgacctctatcatgcatctca 29887296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 98 - 263
Target Start/End: Original strand, 28926382 - 28926547
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 197  Q
    ||||| ||| |||||||||| |||||| ||||||||| | | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28926382 tccattaataagaatagtgtatgtgtacatatttggttgaagaccctggtctttcaattttgttaataatgcaattgccttgtcaacatgatggtttttg 28926481  T
Q  198 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    ||||||||||  |||| |||| |||||||||||||||||||| ||||||||||||||| |||||||    
T  28926482 cataaagcatccaatagagaactgtaagtaattatatcaggtggttgacctctatcatgcatctca 28926547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 108 - 263
Target Start/End: Complemental strand, 24731009 - 24730854
Alignment:
Q  108 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 207  Q
    |||| ||||| |||||| |||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24731009 agaacagtgtatgtgtacatatctggtcgaataccctggtctttcaaatttgttaataatgcaattgccttgtcaacatgatggtttttgcataaagcat 24730910  T
Q  208 ttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
      ||||||||||||||||| ||||||| |||| ||||||||||||||| |||||||    
T  24730909 ccaatatagaattgtaagttattatattaggtggttgacctctatcatgcatctca 24730854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 29835379 - 29835238
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 197  Q
    ||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  29835379 tccatcaataagaatagtgtatgtgtacatatttggtcgaataccctggtctttcaattttgttaataacgcaattgccttgtcaacctgatggtttttg 29835280  T
Q  198 cataaagcatttaatatagaattgtaagtaattatatcaggt 239  Q
    ||||||||||  ||||||||| ||||||||||||||||||||    
T  29835279 cataaagcatccaatatagaactgtaagtaattatatcaggt 29835238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 29894717 - 29894576
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 197  Q
    ||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  29894717 tccatcaataagaatagtgtatgtgtacatatttggtcgaataccctggtctttcaattttgttaataacgcaattgccttgtcaacctgatggtttttg 29894618  T
Q  198 cataaagcatttaatatagaattgtaagtaattatatcaggt 239  Q
    ||||||||||  ||||||||| ||||||||||||||||||||    
T  29894617 cataaagcatccaatatagaactgtaagtaattatatcaggt 29894576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 101 - 263
Target Start/End: Complemental strand, 29073924 - 29073762
Alignment:
Q  101 atcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcat 200  Q
    |||||| |||||||||| |||||  ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  29073924 atcaataagaatagtgtatgtgtgcatagttggtcgaataccttggtctttcaattttgttaataatgcaattgccttgtcaacctgatggtttttgcat 29073825  T
Q  201 aaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    |||||||  ||||||||| |||||||||||||||||||| ||  ||||||||||| |||||||    
T  29073824 aaagcatccaatatagaactgtaagtaattatatcaggtggtacacctctatcatgcatctca 29073762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 101 - 263
Target Start/End: Complemental strand, 29078688 - 29078526
Alignment:
Q  101 atcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcat 200  Q
    |||||| |||||||||| |||||  ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  29078688 atcaataagaatagtgtatgtgtgcatagttggtcgaataccttggtctttcaattttgttaataatgcaattgccttgtcaacctgatggtttttgcat 29078589  T
Q  201 aaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    |||||||  ||||||||| |||||||||||||||||||| ||  ||||||||||| |||||||    
T  29078588 aaagcatccaatatagaactgtaagtaattatatcaggtggtacacctctatcatgcatctca 29078526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 101 - 263
Target Start/End: Complemental strand, 29106497 - 29106335
Alignment:
Q  101 atcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcat 200  Q
    |||||| |||||||||| |||||  ||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  29106497 atcaataagaatagtgtatgtgtgcatagttggtcgaataccttggtctttcaattttgttaataatgcaattgccttgtcaacctgatggtttttgcat 29106398  T
Q  201 aaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    |||||||  ||||||||| |||||||||||||||||||| ||  ||||||||||| |||||||    
T  29106397 aaagcatccaatatagaactgtaagtaattatatcaggtggtacacctctatcatgcatctca 29106335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 29866813 - 29866672
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 197  Q
    ||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||  ||||||||||||    
T  29866813 tccatcaataagaatagtgtatgtgtacatatttggtcgaataccctggtctttcaaatttgttaataacgcaattgccttgtcaacctgatggtttttg 29866714  T
Q  198 cataaagcatttaatatagaattgtaagtaattatatcaggt 239  Q
    ||||||||||  ||||||||| ||||||||||||||||||||    
T  29866713 cataaagcatccaatatagaactgtaagtaattatatcaggt 29866672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 98 - 263
Target Start/End: Original strand, 30061830 - 30061995
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 197  Q
    |||| ||||||||||||||| |||||||||||| ||| | |||||||| ||||||||||||| ||||||||  ||||||||||||| |||||||  ||||    
T  30061830 tccaccaattagaatagtgtatgtgtaaatattcggttgaataccctgatctttcaattttgataataatgtgattgccttgtcaagatgatggcgtttg 30061929  T
Q  198 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    ||||||||||  ||||||||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  30061930 cataaagcatccaatatagaattgtaagtaattatattaggtggttgacctctatcatgcatctca 30061995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 108 - 263
Target Start/End: Original strand, 24890091 - 24890246
Alignment:
Q  108 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 207  Q
    ||||| |||| |||||| |||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24890091 agaatggtgtatgtgtacatatctggtcgaataccctggtctttcaaatttgttaataatgcaattgccttgtcaacatgatggtttttgcataaagcat 24890190  T
Q  208 ttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
      ||||||||| ||||||||| ||||| |||| | ||||||||||||| |||||||    
T  24890191 ccaatatagaactgtaagtaactatattaggtggctgacctctatcatgcatctca 24890246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 98 - 263
Target Start/End: Original strand, 29211228 - 29211393
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 197  Q
    ||||||||| |||||||||| |||||  ||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||   ||||| |||||    
T  29211228 tccatcaataagaatagtgtatgtgtgcatatttggtcgaataccttggtctttcaattttgttaataatgcaactgccttgtcaacccgatgggttttg 29211327  T
Q  198 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    ||||||||||  ||||||||| ||||||||| ||||| |||| ||||||||||||||| |||||||    
T  29211328 cataaagcatccaatatagaactgtaagtaactatattaggtggttgacctctatcatgcatctca 29211393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 98 - 260
Target Start/End: Original strand, 24263587 - 24263749
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 197  Q
    ||||||||| |||||||||| |||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||   |||||||||||    
T  24263587 tccatcaataagaatagtgtatgtgtacatatttggtcgaataccctggtctttcaattttattaataatgcaattgccttgtcaaccagatggtttttg 24263686  T
Q  198 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatc 260  Q
    ||||| ||||  ||||||||| |||| || |||||||||||| |||| |||| ||||| ||||    
T  24263687 cataaggcatccaatatagaactgtacgtgattatatcaggttgttgccctcgatcatgcatc 24263749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 98 - 263
Target Start/End: Complemental strand, 29905803 - 29905638
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 197  Q
    ||||||||| ||||| |||| |||||| ||||||||| | |||||| ||||||||||||||||||||||||  |||||||||||||  |||| |||||||    
T  29905803 tccatcaataagaatggtgtatgtgtacatatttggttgaatacccaggtctttcaattttgttaataatgtgattgccttgtcaacctgatagtttttg 29905704  T
Q  198 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    ||||||||||  ||||||||| | |||||||||||||||||| | ||||||||||||| |||||||    
T  29905703 cataaagcatccaatatagaactctaagtaattatatcaggtggctgacctctatcatgcatctca 29905638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 98 - 263
Target Start/End: Original strand, 30126890 - 30127055
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 197  Q
    ||||||||| |||||||||| |||||| | | ||||| | |||||||||| ||| ||||| ||||| ||||||||||| |||||||  ||||||||||||    
T  30126890 tccatcaataagaatagtgtatgtgtacacacttggttgaataccctggtttttaaatttcgttaacaatgcaattgctttgtcaacctgatggtttttg 30126989  T
Q  198 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    ||||||||||  ||||||||||||||| |||||||||||||| ||||||||||||||| |||||||    
T  30126990 cataaagcatccaatatagaattgtaaataattatatcaggtggttgacctctatcatgcatctca 30127055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 108 - 263
Target Start/End: Complemental strand, 29882589 - 29882434
Alignment:
Q  108 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 207  Q
    |||||||||| |||||  |||| |||||| ||||| ||| |||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  29882589 agaatagtgtatgtgttcatatctggtcgaataccttggcctttcaattttgttaataatgcaattgctttgtcaacatgatgttttttgcataaagcat 29882490  T
Q  208 ttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
      |||||||||||||| ||||||||||||||| |||| |||| ||||| |||||||    
T  29882489 ccaatatagaattgtaggtaattatatcaggttgttgccctcgatcatgcatctca 29882434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 108 - 263
Target Start/End: Complemental strand, 29909745 - 29909590
Alignment:
Q  108 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 207  Q
    |||||||||| |||||  |||| |||||| ||||| ||| |||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||    
T  29909745 agaatagtgtatgtgttcatatctggtcgaataccttggcctttcaattttgttaataatgcaattgctttgtcaacatgatgttttttgcataaagcat 29909646  T
Q  208 ttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
      |||||||||||||| ||||||||||||||| |||| |||| ||||| |||||||    
T  29909645 ccaatatagaattgtaggtaattatatcaggttgttgccctcgatcatgcatctca 29909590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 110 - 255
Target Start/End: Original strand, 24886413 - 24886557
Alignment:
Q  110 aatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgcc-ttgtcaatatgatggtttttgcataaagcatt 208  Q
    |||||||| |||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||| ||||||||||     
T  24886413 aatagtgtatgtgtacatatctggtcgaataccctggtctttcaattttgttaataatgcaattgcctttgtc-acatgatggttttt-cataaagcatc 24886510  T
Q  209 taatatagaattgtaagtaattatatcaggtagttgacctctatcat 255  Q
     |||||||||||||||||||||||||||||| | |||||||||||||    
T  24886511 caatatagaattgtaagtaattatatcaggtggctgacctctatcat 24886557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 98 - 263
Target Start/End: Original strand, 30118576 - 30118741
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 197  Q
    ||||||||| ||||| |||| |||||| ||||||||| | || ||| ||||||||||||||||||||||||  |||||||||||||  |||| |||||||    
T  30118576 tccatcaataagaatggtgtatgtgtacatatttggttgaattcccaggtctttcaattttgttaataatgtgattgccttgtcaacctgatagtttttg 30118675  T
Q  198 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    ||||||||||  ||||||||| | |||||||||||||||||| | ||||||||||||| |||||||    
T  30118676 cataaagcatccaatatagaactctaagtaattatatcaggtggctgacctctatcatgcatctca 30118741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 108 - 263
Target Start/End: Complemental strand, 29903400 - 29903245
Alignment:
Q  108 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 207  Q
    ||||| |||| |||||  ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||| ||  |||||| ||||||||||||||||    
T  29903400 agaatggtgtatgtgttcatatttggtcgaataccctggtctttcaattttgttaataacgcaattgctttgccagcatgatgttttttgcataaagcat 29903301  T
Q  208 ttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
      |||||||||||||| ||||||||||||||| |||| |||| ||||| |||||||    
T  29903300 ccaatatagaattgtaggtaattatatcaggttgttgccctcgatcatgcatctca 29903245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 108 - 263
Target Start/End: Original strand, 29357824 - 29357979
Alignment:
Q  108 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 207  Q
    |||||||||| |||||| ||||||||| | |||||||||| |||||  | ||||||||| |||||||| |||||||  ||||||||||||||||||||||    
T  29357824 agaatagtgtatgtgtacatatttggttgaataccctggtttttcatctgtgttaataacgcaattgcattgtcaacctgatggtttttgcataaagcat 29357923  T
Q  208 ttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
      ||||||||| ||||||||| ||||| |||| ||||||||||||||| |||||||    
T  29357924 ccaatatagaactgtaagtaactatattaggtggttgacctctatcatgcatctca 29357979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 102 - 261
Target Start/End: Complemental strand, 29929433 - 29929274
Alignment:
Q  102 tcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcata 201  Q
    ||||| |||||||||| |||||| | | ||||| | |||||||||||||| ||||| ||||| ||||||||||| |||||||  |||||| |||||||||    
T  29929433 tcaataagaatagtgtatgtgtacacacttggttgaataccctggtctttgaatttcgttaacaatgcaattgctttgtcaacctgatgggttttgcata 29929334  T
Q  202 aagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatct 261  Q
    |||||| |||||||||||||||||||| ||||| ||||  |  ||||||||||| |||||    
T  29929333 aagcatctaatatagaattgtaagtaactatattaggtgctacacctctatcatgcatct 29929274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 261
Target Start/End: Complemental strand, 29116415 - 29116262
Alignment:
Q  108 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 207  Q
    |||||| ||| |||||| ||||||||| | ||||||| |||||||||||| ||||| ||||||||||| |||||||  |||||| |||||||||||||||    
T  29116415 agaatactgtatgtgtacatatttggttgaatacccttgtctttcaatttcgttaacaatgcaattgctttgtcaacttgatggattttgcataaagcat 29116316  T
Q  208 ttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatct 261  Q
     |||||||||||||||||||  ||||  |||| ||  ||||||||||| |||||    
T  29116315 ctaatatagaattgtaagtacgtatagtaggtggtacacctctatcatgcatct 29116262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 261
Target Start/End: Complemental strand, 29085182 - 29085019
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 197  Q
    ||||||||| |||||||||| |||||| ||  ||||| | |||||||||||||| ||||| ||||  ||||||||||| |||||||  |||||| |||||    
T  29085182 tccatcaataagaatagtgtatgtgtacatgcttggttgaataccctggtctttaaatttcgttatcaatgcaattgctttgtcaacttgatgggttttg 29085083  T
Q  198 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatct 261  Q
     ||||||||| || ||||||||||||||||| ||||| |||| ||  ||||||||||| |||||    
T  29085082 aataaagcatctattatagaattgtaagtaagtatattaggtggtacacctctatcatgcatct 29085019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 98 - 263
Target Start/End: Original strand, 29348433 - 29348598
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 197  Q
    ||||||||| |||||||||| |||||| |||| |||| | || || |  |||||||  || ||||| || ||||||||||||||||  ||||||||||||    
T  29348433 tccatcaataagaatagtgtatgtgtacatatctggttgaattccttcatctttcatcttcgttaacaacgcaattgccttgtcaacctgatggtttttg 29348532  T
Q  198 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    ||||||||||  ||||||||||||||||||||| ||||| || ||  ||||||||||| |||||||    
T  29348533 cataaagcatccaatatagaattgtaagtaattttatcatgtggtacacctctatcatgcatctca 29348598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 98 - 261
Target Start/End: Complemental strand, 29889894 - 29889731
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 197  Q
    ||||||||| |||||||||| ||| || | ||||||| | |||| ||||||||| ||||| ||| | ||||||||||  |||||||  |||||| |||||    
T  29889894 tccatcaataagaatagtgtatgtttacacatttggttgaatactctggtctttaaatttcgttgacaatgcaattgttttgtcaacctgatgggttttg 29889795  T
Q  198 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatct 261  Q
    |||||||||| |||||||||||||||||| | ||||| |||| ||  ||||||||||| |||||    
T  29889794 cataaagcatctaatatagaattgtaagtgactatattaggtggtacacctctatcatgcatct 29889731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 29898168 - 29898076
Alignment:
Q  171 attgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||| |||| |||||||||| |||| ||||||||||||||| |||||||    
T  29898168 attgccttgtcaacctgatggtttttgcataaagcattcaatatagaactgtacgtaattatattaggtggttgacctctatcatgcatctca 29898076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 120 - 255
Target Start/End: Complemental strand, 29946579 - 29946444
Alignment:
Q  120 gtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaat 219  Q
    ||||| ||| ||||| | ||| |||||||||| | ||||||||| ||| ||||||||||||||| || || ||| ||||||||| |||  |||||||| |    
T  29946579 gtgtacatacttggttgaatatcctggtctttaagttttgttaaaaatacaattgccttgtcaacatcatagttcttgcataaaacatccaatatagagt 29946480  T
Q  220 tgtaagtaattatatcaggtagttgacctctatcat 255  Q
    ||||||||||||||| |||| |||||||||||||||    
T  29946479 tgtaagtaattatattaggtggttgacctctatcat 29946444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 140 - 261
Target Start/End: Complemental strand, 29099465 - 29099344
Alignment:
Q  140 accctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggt 239  Q
    ||||| |||||| ||||| ||||| ||||||||||| |||||||  |||||| ||||||||||||||| |||||||||||||||||||  ||||| ||||    
T  29099465 acccttgtctttaaatttcgttaacaatgcaattgctttgtcaacttgatgggttttgcataaagcatctaatatagaattgtaagtacatatattaggt 29099366  T
Q  240 agttgacctctatcattcatct 261  Q
     ||  ||||||||||| |||||    
T  29099365 ggtacacctctatcatgcatct 29099344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 159 - 263
Target Start/End: Original strand, 29366317 - 29366421
Alignment:
Q  159 gttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattca 258  Q
    ||||| || ||||||||||||||||  ||||||||||||||||||||||  ||||||||||||||||||||| ||||| || ||  ||||||||||| ||    
T  29366317 gttaacaacgcaattgccttgtcaacctgatggtttttgcataaagcatccaatatagaattgtaagtaattttatcatgtggtacacctctatcatgca 29366416  T
Q  259 tctca 263  Q
    |||||    
T  29366417 tctca 29366421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 29876932 - 29876824
Alignment:
Q  155 ttttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatca 254  Q
    |||| ||||||||||||| | ||| |||| ||||||  |||||||||||||||  ||||||||||||||||||||||||| |||| |||| |||||||||    
T  29876932 ttttcttaataatgcaatcgtcttctcaacatgatgaattttgcataaagcatacaatatagaattgtaagtaattatattaggtggttggcctctatca 29876833  T
Q  255 ttcatctca 263  Q
    | |||||||    
T  29876832 tgcatctca 29876824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 163 - 263
Target Start/End: Original strand, 30999838 - 30999938
Alignment:
Q  163 ataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctc 262  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||  ||||||||| ||||| ||| ||||| |||| ||||||||||||||| ||||||    
T  30999838 ataatgcaattgcctggtcaacacgatggtttttgcataaagcatccaatatagaactgtaaataactatattaggtggttgacctctatcatgcatctc 30999937  T
Q  263 a 263  Q
    |    
T  30999938 a 30999938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 30061600 - 30061705
Alignment:
Q  3 tcatttttatcaaacagagaacgtataattattccgtaagtcacagcatttggatagcaattattgtc---cttcatttttgatagcaaagccaaggctc 99  Q
    |||||||||||||||| ||||| |||||||||| ||| |||  |||||||||||| ||||||||||||   | ||||||||||||||| ||||||||||     
T  30061600 tcatttttatcaaacaaagaacatataattatttcgttagttgcagcatttggattgcaattattgtccgtcgtcatttttgatagcatagccaaggctt 30061699  T
Q  100 catcaa 105  Q
    ||||||    
T  30061700 catcaa 30061705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 226
Target Start/End: Original strand, 29949732 - 29949860
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 197  Q
    ||||||||  || ||||||| ||| || ||||||||  | || || |||||||| |  ||| ||||||||||||| ||||||||||  ||||||||||||    
T  29949732 tccatcaacaagtatagtgtatgtatacatatttggctgaattccttggtcttttatcttttttaataatgcaatcgccttgtcaacctgatggtttttg 29949831  T
Q  198 cataaagcatttaatatagaattgtaagt 226  Q
    |||||||||| ||||| ||||||||||||    
T  29949832 cataaagcatctaataaagaattgtaagt 29949860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 263
Target Start/End: Original strand, 24271853 - 24271947
Alignment:
Q  169 caattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    |||||||||||||||  |||||||||||||||||| |||  ||||||||| |||| || |||||||||||| |||| |||| ||||| |||||||    
T  24271853 caattgccttgtcaacctgatggtttttgcataaatcatccaatatagaactgtacgtgattatatcaggttgttgccctcgatcatgcatctca 24271947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 141 - 263
Target Start/End: Complemental strand, 30149648 - 30149526
Alignment:
Q  141 ccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggta 240  Q
    ||||||||||| |  ||| ||||||||||||||||| ||||||  |||||||||||||| ||  |||  |||| |||||||||||| ||||| || | |     
T  30149648 ccctggtctttgatcttttttaataatgcaattgccctgtcaacctgatggtttttgcacaatccatcaaataaagaattgtaagtgattatgtcggttg 30149549  T
Q  241 gttgacctctatcattcatctca 263  Q
    ||||||||||||||| |||||||    
T  30149548 gttgacctctatcatgcatctca 30149526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 263
Target Start/End: Complemental strand, 25451270 - 25451117
Alignment:
Q  110 aatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcattt 209  Q
    |||||||| |||||| | ||||||| | ||||||| |||||| |||| | | |||||| ||||||| |  ||||  ||||| |||||  |||||||||      
T  25451270 aatagtgtatgtgtacacatttggttgaatacccttgtctttaaattctttaaataattcaattgcttcttcaacctgatgttttttcaataaagcatcc 25451171  T
Q  210 aatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    ||||||||| ||||||||| |||||  ||| ||||||||||||||| |||||||    
T  25451170 aatatagaactgtaagtaaatatatttggtggttgacctctatcatgcatctca 25451117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 231
Target Start/End: Original strand, 16702057 - 16702123
Alignment:
Q  165 aatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaatta 231  Q
    ||||||||||||||||||| |||||||||||| |||||||||| |||||  ||||||||||| ||||    
T  16702057 aatgcaattgccttgtcaacatgatggtttttacataaagcatgtaataaggaattgtaagtgatta 16702123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 29867040 - 29866938
Alignment:
Q  3 tcatttttatcaaacagagaacgtataattattccgtaagtcacagcatttggatagcaattattgtccttcatttttgatagcaaagccaaggctccat 102  Q
    |||| |||||||||||||||||| || |||||| | ||||| |  ||||||||| ||||| ||||||| ||||||||||| | ||||||||| ||| |||    
T  29867040 tcatctttatcaaacagagaacggatgattatttcataagttaaggcatttggaaagcaactattgtctttcatttttgacaacaaagccaatgcttcat 29866941  T
Q  103 caa 105  Q
    |||    
T  29866940 caa 29866938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 29835600 - 29835504
Alignment:
Q  9 ttatcaaacagagaacgtataattattccgtaagtcacagcatttggatagcaattattgtccttcatttttgatagcaaagccaaggctccatcaa 105  Q
    ||||||||||||||||| || |||||| | ||||| |  ||||||||| ||||| ||||||| ||||||||||| | ||||||||| ||| ||||||    
T  29835600 ttatcaaacagagaacggatgattatttcataagttaaggcatttggaaagcaactattgtctttcatttttgacaacaaagccaatgcttcatcaa 29835504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 29887682 - 29887586
Alignment:
Q  9 ttatcaaacagagaacgtataattattccgtaagtcacagcatttggatagcaattattgtccttcatttttgatagcaaagccaaggctccatcaa 105  Q
    ||||||||||||||||| || |||||| | ||||| |  ||||||||| ||||| ||||||| ||||||||||| | ||||||||| ||| ||||||    
T  29887682 ttatcaaacagagaacggatgattatttcataagttaaggcatttggaaagcaactattgtctttcatttttgacaacaaagccaatgcttcatcaa 29887586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 226
Target Start/End: Original strand, 29953542 - 29953657
Alignment:
Q  111 atagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcattta 210  Q
    ||||||| ||| || ||||||||  | || || ||||||||||  ||  ||||||||||||| ||||||||||  |||||||||||||| |||||||  |    
T  29953542 atagtgtatgtatacatatttggctgaatcccttggtctttcatcttctttaataatgcaatcgccttgtcaacctgatggtttttgcacaaagcatcca 29953641  T
Q  211 atatagaattgtaagt 226  Q
    ||| ||||||||||||    
T  29953642 ataaagaattgtaagt 29953657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 156
Target Start/End: Original strand, 24271799 - 24271857
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaatt 156  Q
    ||||||||| |||||||||| |||| | ||||||||||| |||||||||||||||||||    
T  24271799 tccatcaataagaatagtgtatgtgaacatatttggtcgaataccctggtctttcaatt 24271857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 247
Target Start/End: Complemental strand, 30053543 - 30053442
Alignment:
Q  146 gtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttga 245  Q
    ||||||||  || ||||| || ||||||||||||||||  |||||||||||||| ||  ||| ||||| |||||||||||| ||||||| || | |||||    
T  30053543 gtctttcatcttcgttaacaacgcaattgccttgtcaacctgatggtttttgcacaatccatataataaagaattgtaagtgattatattagctggttga 30053444  T
Q  246 cc 247  Q
    ||    
T  30053443 cc 30053442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 29912126 - 29912051
Alignment:
Q  108 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaa 183  Q
    ||||| |||| |||||  |||| |||||| ||||| ||| ||||||||||||||||||||| |||||| |||||||    
T  29912126 agaatggtgtatgtgttcatatctggtcgaataccttggcctttcaattttgttaataatgtaattgctttgtcaa 29912051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 29914146 - 29914071
Alignment:
Q  108 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaa 183  Q
    |||||||||| |||||| | | ||||| | |||||||||||||| ||||| ||||| ||||||||||| |||||||    
T  29914146 agaatagtgtatgtgtacacacttggttgaataccctggtctttaaatttcgttaacaatgcaattgctttgtcaa 29914071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 15727090 - 15727152
Alignment:
Q  164 taatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagt 226  Q
    |||| |||||||||||||||  |||||||||||||||||||||| || ||  |||||||||||    
T  15727090 taatacaattgccttgtcaacgtgatggtttttgcataaagcatctattaacgaattgtaagt 15727152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 29894944 - 29894842
Alignment:
Q  3 tcatttttatcaaacagagaacgtataattattccgtaagtcacagcatttggatagcaattattgtccttcatttttgatagcaaagccaaggctccat 102  Q
    |||| |||||||||||| ||||| || |||||| | ||||| ||||||| ||||  |||| ||||||| ||||||||||| | ||||| ||| ||| |||    
T  29894944 tcatctttatcaaacagggaacggatgattatttcataagttacagcatctggaatgcaactattgtctttcatttttgacaacaaagtcaatgcttcat 29894845  T
Q  103 caa 105  Q
    |||    
T  29894844 caa 29894842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 24271578 - 24271651
Alignment:
Q  9 ttatcaaacagagaacgtataattattccgtaagtcacagcatttggatagcaattattgtccttcatttttga 82  Q
    ||||||||||||||||| || |||||| | ||||| ||||||||||||  ||||  |||||| |||||||||||    
T  24271578 ttatcaaacagagaacggatgattatttcataagttacagcatttggaatgcaacaattgtctttcatttttga 24271651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 30126663 - 30126765
Alignment:
Q  3 tcatttttatcaaacagagaacgtataattattccgtaagtcacagcatttggatagcaattattgtccttcatttttgatagcaaagccaaggctccat 102  Q
    |||| |||||||||||||||||| || |||||| | ||||| ||| | ||||||  |||| ||||||| ||||||| | | | ||||||||| ||| |||    
T  30126663 tcatctttatcaaacagagaacggatgattatttcataagttacaacgtttggaatgcaactattgtctttcatttctaacaacaaagccaatgcttcat 30126762  T
Q  103 caa 105  Q
    |||    
T  30126763 caa 30126765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 263
Target Start/End: Complemental strand, 30135250 - 30135124
Alignment:
Q  138 ataccctggtctttcaattttgttaataatgcaattgccttgtcaata-tgatggtttttgcataaagcatttaatatagaattgtaagtaattatatca 236  Q
    ||||| |||||||| |  || ||||||||||  |||||||||||||   |||||||||||||| |||||||  |||| |||||||||||| || | || |    
T  30135250 ataccttggtctttgatcttcgttaataatgtgattgccttgtcaaacctgatggtttttgcacaaagcatccaataaagaattgtaagtgatcacatta 30135151  T
Q  237 ggtagttgacctctatcattcatctca 263  Q
    |   |||||||||| |||| |||||||    
T  30135150 gcaggttgacctctttcatgcatctca 30135124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 24739103 - 24739195
Alignment:
Q  171 attgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    |||||||||||||  |||||||||||||| |||||||  ||||  ||||||||||| || | |||||   |||| ||||||| || |||||||    
T  24739103 attgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagtgatcacatcagcaggttggcctctattatgcatctca 24739195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 98 - 263
Target Start/End: Complemental strand, 4301 - 4136
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttg 197  Q
    ||||| ||| |||||||||| |||||| ||||||||| | | |||||||||||||||||||||||||||||||||||||||||||    |||||||||||    
T  4301 tccattaataagaatagtgtatgtgtacatatttggttgaagaccctggtctttcaattttgttaataatgcaattgccttgtcacctggatggtttttg 4202  T
Q  198 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    ||||||||||  |||| |||| |||||||||||||||||||| ||||||||||||||| |||||||    
T  4201 cataaagcatccaatagagaactgtaagtaattatatcaggtggttgacctctatcatgcatctca 4136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 108 - 263
Target Start/End: Complemental strand, 22497 - 22342
Alignment:
Q  108 agaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 207  Q
    ||||| |||| |||||  |||| |||||| ||||| ||| ||||||||||||||||||||| |||||| ||||| | |||||| ||||||||||||||||    
T  22497 agaatggtgtatgtgttcatatctggtcgaataccttggcctttcaattttgttaataatgtaattgctttgtccacatgatgttttttgcataaagcat 22398  T
Q  208 ttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
      |||||||||||||||||||||||||||||| |||| |||| || || |||||||    
T  22397 ccaatatagaattgtaagtaattatatcaggttgttgccctcgataatgcatctca 22342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 262
Target Start/End: Original strand, 24219116 - 24219234
Alignment:
Q  144 tggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagtt 243  Q
    |||||||| | ||||||||| ||| ||||||||||||||| |||||||||||||||||||||||  |||| |||||||||||||||||||| |||| |||    
T  24219116 tggtctttaagttttgttaacaattcaattgccttgtcaacatgatggtttttgcataaagcatccaataaagaattgtaagtaattatattaggtggtt 24219215  T
Q  244 gacctctatcattcatctc 262  Q
    |||||||||||| ||||||    
T  24219216 gacctctatcatgcatctc 24219234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 264
Target Start/End: Complemental strand, 24226911 - 24226818
Alignment:
Q  171 attgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctcac 264  Q
    |||||||||||||  |||||||||||||| ||  ||| ||||| |||||||||||| ||||| | || | ||||||||||||||| ||||||||    
T  24226911 attgccttgtcaacctgatggtttttgcacaatccatctaataaagaattgtaagtgattatgttagctggttgacctctatcatgcatctcac 24226818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 33998037 - 33997967
Alignment:
Q  165 aatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatc 235  Q
    |||| |||||||| ||| | |||||| ||||||||||||||||  |||| |||||| ||||| ||||||||    
T  33998037 aatgtaattgcctggtcgagatgatgatttttgcataaagcatgcaataaagaattataagtgattatatc 33997967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 226
Target Start/End: Complemental strand, 16351214 - 16351086
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaa-taatgcaattgccttgtcaatatgatggttttt 196  Q
    ||||||||| || ||| ||| |||| | ||||||||| | || || || ||||| |||||| |||| ||||||||| |||||||||| ||| ||||||||    
T  16351214 tccatcaataagtatattgtatgtgcacatatttggttgaatgccatgttcttt-aattttcttaactaatgcaatagccttgtcaacatgttggttttt 16351116  T
Q  197 gcataaagcatttaatatagaattgtaagt 226  Q
    ||| ||| ||| ||  | ||||||||||||    
T  16351115 gcagaaaacatctatcaaagaattgtaagt 16351086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 15062737 - 15062868
Alignment:
Q  124 aaatatttggtcggataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgta 223  Q
    |||||| |||| | |||||||  ||||| | ||||||||||||  |||||||||| |||| ||||| ||||||||||| ||||| |||||||||||||||    
T  15062737 aaatatctggttgaatacccttctctttaatttttgttaataacacaattgccttatcaacatgattgtttttgcatatagcatctaatatagaattgta 15062836  T
Q  224 agtaattatatcaggtagttgacctctatcat 255  Q
    ||||||||||| || | |||||||||||||||    
T  15062837 agtaattatattagatggttgacctctatcat 15062868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 7e-24; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 153 - 265
Target Start/End: Complemental strand, 10130246 - 10130134
Alignment:
Q  153 aattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctat 252  Q
    |||||| |||| ||||| ||||| ||||||| ||| || |||| |||||||||||| |||| |||||||||||||||||||| |||| ||||||||||||    
T  10130246 aattttcttaacaatgcgattgctttgtcaacatggtgattttggcataaagcattcaataaagaattgtaagtaattatattaggttgttgacctctat 10130147  T
Q  253 cattcatctcact 265  Q
    ||  |||||||||    
T  10130146 cagacatctcact 10130134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 17251411 - 17251312
Alignment:
Q  164 taatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    ||||||||||||||| ||||  |||||| ||||||| ||||||| ||  | |||| ||||||| |||| || |||| ||||||||||||||| |||||||    
T  17251411 taatgcaattgccttatcaacttgatggcttttgcacaaagcatctatcaaagaagtgtaagttattacattaggtggttgacctctatcatgcatctca 17251312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 263
Target Start/End: Complemental strand, 19490374 - 19490249
Alignment:
Q  138 ataccctggtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcag 237  Q
    ||||| || ||||||| |||  ||| |||||| |||||||||||  | |||||  |||| |||||||||| ||||| |||||| ||||| |||| ||| |    
T  19490374 ataccttgatctttcattttgcttagtaatgctattgccttgtcggtttgatgacttttacataaagcatctaataaagaattataagttattacatcgg 19490275  T
Q  238 gtagttgacctctatcattcatctca 263  Q
    || | ||||||||||||  |||||||    
T  19490274 gtggctgacctctatcaagcatctca 19490249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 41316358 - 41316274
Alignment:
Q  164 taatgcaattgccttgtcaatatgatggtttttgcataaagcattta-atatagaattgtaagtaattatatcaggtagttgacc 247  Q
    ||||||||| |||||||||| ||||| | ||||||||||||||| || ||| |||| |||||||   |||||||||| |||||||    
T  41316358 taatgcaatagccttgtcaagatgattgcttttgcataaagcatctatataaagaactgtaagtggatatatcaggtggttgacc 41316274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 41198828 - 41198768
Alignment:
Q  175 ccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatc 235  Q
    ||||||||| |||||||||||| |||||||||| |||||  |||||| || | ||||||||    
T  41198828 ccttgtcaacatgatggtttttacataaagcatgtaataaggaattgcaactgattatatc 41198768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 53532 - 53596
Alignment:
Q  199 ataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  53532 ataaagcatttaatatagaattgtaagtaattatattaggtggttgacctctatcatgcatctca 53596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 164 - 263
Target Start/End: Complemental strand, 3331 - 3232
Alignment:
Q  164 taatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| || ||  ||||||||||| |||||||||| | ||||||| ||||||  |||||||    
T  3331 taatgcaatagccttgtcaacatgatggtttttgcataaagcatctattaatgaattgtaagtgattatatcagctggttgaccactatcacgcatctca 3232  T

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Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 98 - 226
Target Start/End: Complemental strand, 3643201 - 3643073
Alignment:
Q  98 tccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaa-taatgcaattgccttgtcaatatgatggttttt 196  Q
    ||||||||| || ||| ||| |||||| ||| ||||| | || ||||||||||| |||||| |||| ||||||||| || ||||||||||||||||||||    
T  3643201 tccatcaataagtatattgtatgtgtacatacttggttgaatgccctggtcttt-aattttcttaactaatgcaatagctttgtcaatatgatggttttt 3643103  T
Q  197 gcataaagcatttaatatagaattgtaagt 226  Q
    ||||||| ||| ||  | ||||||||||||    
T  3643102 gcataaaacatctatcaaagaattgtaagt 3643073  T

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Target: scaffold0014 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 99 - 247
Target Start/End: Complemental strand, 137537 - 137389
Alignment:
Q  99 ccatcaattagaatagtgtgtgtgtaaatatttggtcggataccctggtctttcaattttgttaa-taatgcaattgccttgtcaatatgatggtttttg 197  Q
    |||||||| || ||| ||| |||||| ||||||||| | || || |||||||| |||||| || | ||||||||| || ||||||| ||||| |||||||    
T  137537 ccatcaataagtatattgtatgtgtacatatttggttgaatgccttggtcttt-aattttcttgactaatgcaatagctttgtcaagatgattgtttttg 137439  T
Q  198 cataaagcatttaatatagaattgtaagtaattatatcaggtagttgacc 247  Q
    |||||||||| || || |||| |||| |||| ||| |||||| |||||||    
T  137438 cataaagcatctattaaagaactgtaggtaaatatgtcaggtggttgacc 137389  T

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Target: scaffold0014; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 261
Target Start/End: Original strand, 121382 - 121478
Alignment:
Q  165 aatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatct 261  Q
    |||||||||||||||||||  ||||| ||||||||||||||||  ||||  |||||||| || || ||||  |   ||||||||||||||| |||||    
T  121382 aatgcaattgccttgtcaacttgatgatttttgcataaagcatgcaataaggaattgtatgtgataatattggcaggttgacctctatcatgcatct 121478  T

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Target: scaffold0014; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 104652 - 104722
Alignment:
Q  177 ttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacc 247  Q
    ||||||| ||||| ||||||||||||||||| || || |||| ||||||||| ||| | |||| |||||||    
T  104652 ttgtcaagatgattgtttttgcataaagcatctattaaagaactgtaagtaaatatgttaggtggttgacc 104722  T

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Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 126024 - 126086
Alignment:
Q  164 taatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagt 226  Q
    ||||||||| ||||||||||| |||||||||||||||||||||| || ||  |||||||||||    
T  126024 taatgcaatagccttgtcaatctgatggtttttgcataaagcatctattaaggaattgtaagt 126086  T

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Target: scaffold0429 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 6294 - 6211
Alignment:
Q  164 taatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacc 247  Q
    |||| |||| |||||||||| |||||||||||||||||| |||| || || ||||||||||||   ||| |||||| |||||||    
T  6294 taatacaatagccttgtcaacatgatggtttttgcataatgcatctattaaagaattgtaagtgcatatgtcaggtggttgacc 6211  T

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Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 263
Target Start/End: Original strand, 47804 - 47903
Alignment:
Q  164 taatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    ||||||||| ||||||||||  |||| |||||||||||||| ||||| || |||||||||||| | |||||  ||| |||| ||  |||||| |||||||    
T  47804 taatgcaatagccttgtcaacctgatagtttttgcataaagaatttattaaagaattgtaagtgaatatattgggtggttggccattatcatgcatctca 47903  T

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Target: scaffold0051; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 247
Target Start/End: Original strand, 43201 - 43269
Alignment:
Q  179 gtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacc 247  Q
    ||||| |||||||||||||||||| |||| || || ||||||||||||   ||| |||||| |||||||    
T  43201 gtcaacatgatggtttttgcataatgcatctattaaagaattgtaagtgcatatgtcaggttgttgacc 43269  T

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Target: chr4 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 44262489 - 44262556
Alignment:
Q  159 gttaataatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagt 226  Q
    ||||||||||  |||||||||||||  |||||||||||||| |||||||  ||||  |||||||||||    
T  44262489 gttaataatgtgattgccttgtcaacctgatggtttttgcacaaagcatccaataaggaattgtaagt 44262556  T

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Target: scaffold0654 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 1122 - 1183
Alignment:
Q  165 aatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagt 226  Q
    |||||||||||||||||||  ||||||||||| |||||||| | ||| |  |||||||||||    
T  1122 aatgcaattgccttgtcaacttgatggtttttacataaagcgtgtaagaaggaattgtaagt 1183  T

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Target: chr8 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 9782655 - 9782594
Alignment:
Q  146 gtctttcaattttgttaataatgcaattgccttgtcaatatgatggtttttgcataaagcat 207  Q
    ||||||||  |||||||| || ||||||||||||||||  |||||| ||||||| |||||||    
T  9782655 gtctttcatctttgttaacaacgcaattgccttgtcaacctgatggattttgcacaaagcat 9782594  T

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Target: scaffold0652 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 261
Target Start/End: Original strand, 1197 - 1293
Alignment:
Q  165 aatgcaattgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatct 261  Q
    |||||||||||||||||||  ||||| ||||| |||||||| | ||| |  ||||||||||| || | ||| |   ||||||||||||||| |||||    
T  1197 aatgcaattgccttgtcaacttgatgatttttacataaagcgtgtaagaaggaattgtaagtgatcacatcggcaggttgacctctatcatgcatct 1293  T

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Target: scaffold0110 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 43777 - 43869
Alignment:
Q  171 attgccttgtcaatatgatggtttttgcataaagcatttaatatagaattgtaagtaattatatcaggtagttgacctctatcattcatctca 263  Q
    |||||||||||||  |||||||||||||| ||  ||| ||||| |||| ||||||| || || |  | | ||||||||||||||| |||||||    
T  43777 attgccttgtcaacctgatggtttttgcacaatccatctaataaagaactgtaagtgataatgttcgctggttgacctctatcatgcatctca 43869  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 31220 - 31264
Alignment:
Q  169 caattgccttgtcaatatgatggtttttgcataaagcatttaata 213  Q
    |||| |||||||||| |||||||||||| |||||||||| |||||    
T  31220 caatggccttgtcaacatgatggtttttacataaagcatgtaata 31264  T

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