View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17964_high_5 (Length: 603)
Name: NF17964_high_5
Description: NF17964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17964_high_5 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 482; Significance: 0; HSPs: 26)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 21 - 582
Target Start/End: Complemental strand, 30060637 - 30060076
Alignment:
| Q |
21 |
tacggaggttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttca |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30060637 |
tacggaggttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttca |
30060538 |
T |
|
| Q |
121 |
ttcaagatgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagca |
220 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30060537 |
ttcaagatgcatgaccttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagca |
30060438 |
T |
|
| Q |
221 |
cacaccacattagttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttacgaacatggtttgagttttgtagtac |
320 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
30060437 |
cacaccacattagttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacatggtttgagttttgtagtac |
30060338 |
T |
|
| Q |
321 |
ttggtcaaaagaaaaacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcat |
420 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30060337 |
tttttcaaaagaaaaacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcat |
30060238 |
T |
|
| Q |
421 |
ttaaggtatttggaacttatttctcttgacatagaaaagttgcctaactcaatttacaaattacaaaaactggaaatcttgaaaataaaaaagtgtgatt |
520 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| | ||| | |
|
|
| T |
30060237 |
ttaaggtatttggaacttcgttctcttgatataaaaaagttgcctgactcaatttacaacttacaaaaactggaaatcttgaaaataaaagactgtcgta |
30060138 |
T |
|
| Q |
521 |
cactgagttgtcttccgaaacgcttggtttgtttacaaaatcttagacatatagtcattgaa |
582 |
Q |
| |
|
|||||||||||| || |||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
30060137 |
aactgagttgtctcccaaaacgcttggcttgcttacaaaatcttagacatatagtcattgaa |
30060076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 19 - 581
Target Start/End: Complemental strand, 30749913 - 30749351
Alignment:
| Q |
19 |
aatacggaggttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacattt |
118 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30749913 |
aatatggaggttgaagatgttggcatcatggtttgggatgaattgtatcaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacattt |
30749814 |
T |
|
| Q |
119 |
cattcaagatgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaag |
218 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
30749813 |
cattcaagattcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcgaaaag |
30749714 |
T |
|
| Q |
219 |
cacacaccacattagttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttacgaacatggtttgagttttgtagt |
318 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
30749713 |
cacacaccatattagttttgacaataacgactcgttatccttcgacaaggatgctttcaaaatagttgaatccttgcgaacatggtttgagttgtgtagt |
30749614 |
T |
|
| Q |
319 |
acttggtcaaaagaaaaacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgaga-gccattactaggtagtttaatt |
417 |
Q |
| |
|
| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| ||| ||||| |||||| ||||||||| |
|
|
| T |
30749613 |
attttgtcaaaagaaaaacatgattacttcccaacaaacctttctcttcgggttttacgcacatcctttatcc-agatgccatcactagggagtttaatt |
30749515 |
T |
|
| Q |
418 |
catttaaggtatttggaacttatttctcttgacatagaaaagttgcctaactcaatttacaaattacaaaaactggaaatcttgaaaataaaaaagtgtg |
517 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
30749514 |
catttaaggtatttggaacttcgttctcttgatataaaaaagttgcctaactcaatttacaacttacaaaaactggaaatcttgaaaataaaacgctgtc |
30749415 |
T |
|
| Q |
518 |
attcactgagttgtcttccgaaacgcttggtttgtttacaaaatcttagacatatagtcattga |
581 |
Q |
| |
|
| |||||||||||| || |||||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
30749414 |
gtaaactgagttgtctcccaaaacgcttggcttgcttacaaaatcttagacatatagtcattga |
30749351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 19 - 588
Target Start/End: Complemental strand, 30400344 - 30399778
Alignment:
| Q |
19 |
aatacggaggttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacattt |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||| |
|
|
| T |
30400344 |
aatacggaggttgaagatgttggcatcatggtttgggatgaattgtaccaaaaatcattctttcaagacaaaaaaatggatgaattttctggcaacattt |
30400245 |
T |
|
| Q |
119 |
cattcaagatgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaag |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
30400244 |
cattcaagatgcatgatcttgtccatgatctcgctaagtcagtaatggggcaagaatgtatatatttggagaatgcaaacatgactagtttgtcaaaaag |
30400145 |
T |
|
| Q |
219 |
cacacaccacattagttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttacgaacatggtttgagttttgtagt |
318 |
Q |
| |
|
|||||||||||| |||||| || | | | | |||||| ||||| ||| ||| |||| || |||||||||||| ||||||||||||||||||| | |
|
|
| T |
30400144 |
cacacaccacataagttttaactctgataatttgttatcattcgatgagggtgccttcagaaaagttgaatccttgcgaacatggtttgagtttt---ct |
30400048 |
T |
|
| Q |
319 |
acttggtcaaaagaaaaacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattc |
418 |
Q |
| |
|
|||| |||||||| |||| ||||||||||||||| ||| |||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
30400047 |
acttttccaaaagaagaacaggattacttcccaacagacccttctcttcgggttttatgcacaacctttatccgggggccattactaggtagtttaattc |
30399948 |
T |
|
| Q |
419 |
atttaaggtatttggaacttatttctcttgacatagaaaagttgcctaactcaatttacaaattacaaaaactggaaatcttgaaaataaaaaagtgtga |
518 |
Q |
| |
|
|||||||||||||||| ||| ||| |||||||||| || |||||||| ||||||||||||| |||||||||||||||| ||||||||||||| | |||| |
|
|
| T |
30399947 |
atttaaggtatttggagcttctttatcttgacatacaagagttgcctgactcaatttacaacttacaaaaactggaaaccttgaaaataaaacattgtgg |
30399848 |
T |
|
| Q |
519 |
ttcactgagttgtcttccgaaacgcttggtttgtttacaaaatcttagacatatagtcattgaatattgt |
588 |
Q |
| |
|
| ||||| |||||| || |||||||||| || ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
30399847 |
tgaactgatttgtctcccaaaacgcttggctttcttacaaaatcttagacatatagttattgaatattgt |
30399778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 28 - 588
Target Start/End: Original strand, 30677013 - 30677570
Alignment:
| Q |
28 |
gttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattcaaga |
127 |
Q |
| |
|
||||| |||||||| | || ||| ||| | ||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||| || |||| |
|
|
| T |
30677013 |
gttgatgatgttggaaacacggtttggaaggaattgtaccaaaaatcattctttcaagatagaaagatggatgaatattctggagacatttcttttaaga |
30677112 |
T |
|
| Q |
128 |
tgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacacca |
227 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||| |
|
|
| T |
30677113 |
tgcatgatcttgtccatgatctcgctcaattagtaatggggccagaatgtatgtatttggagaaaaaaaacatgaccagtttgtcaaaaagcacacacca |
30677212 |
T |
|
| Q |
228 |
cattagttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttacgaacatggtttgagttttgtagtacttggtca |
327 |
Q |
| |
|
|||| |||||||| ||||||| ||||||||| || ||| |||||||||||| |||||||||||| |||||| |||| |||| ||| || || |
|
|
| T |
30677213 |
cattggttttgacctcaaagacttgttatcctttgataagaatgctttcaaaaaagttgaatccttgagaacattgtttcagtt---gagttattattcc |
30677309 |
T |
|
| Q |
328 |
aaagaaaaacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcatttaaggt |
427 |
Q |
| |
|
||| |||||||||||| |||||||||| |||||||||||||||||||||||| | |||||||||| ||||| |||||| ||||||||||||||||||| |
|
|
| T |
30677310 |
aaaaaaaaacatgatttcttcccaacatacctttctcttcgggttttatgcacatcctttatccggatgccatcactagggagtttaattcatttaaggt |
30677409 |
T |
|
| Q |
428 |
atttggaacttatttctcttgacatagaaaagttgcctaactcaatttacaaattacaaaaactggaaatcttgaaaataaaaaagtgtgattcactgag |
527 |
Q |
| |
|
||||||||||| ||||||||||||| | | ||||||| ||||||||||||| || |||| ||||||||||||||||||||| | |||||| ||| || |
|
|
| T |
30677410 |
atttggaacttcgttctcttgacataaatatgttgcctgactcaatttacaacctaaaaaagctggaaatcttgaaaataaaacactgtgataaacttag |
30677509 |
T |
|
| Q |
528 |
ttgtcttccgaaacgcttggtttgtttacaaaatcttagacatatagtcattgaatattgt |
588 |
Q |
| |
|
|| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30677510 |
ctggcttccaaaacgcttggcttgtttacaaaatcttagacatatagtcattgaatattgt |
30677570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 25 - 579
Target Start/End: Original strand, 30242214 - 30242765
Alignment:
| Q |
25 |
gaggttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattca |
124 |
Q |
| |
|
||||||||||||||||| | |||||| ||| | |||||||||||||||||||| |||||||| || ||||||||||||| |||||| |||||||| |||| |
|
|
| T |
30242214 |
gaggttgaagatgttggaaacatggtttggaaggaattgtaccaaaaatcattttttcaagacagcaaaatggatgaatattctggagacatttctttca |
30242313 |
T |
|
| Q |
125 |
agatgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacaca |
224 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||||||||||||| |
|
|
| T |
30242314 |
agatgcatgatcttgtccatgatctcgctcaatcagtaatggggccagaatgtatgtatttggagaacaaaaacatgaccagtttgtcaaaaagcacaca |
30242413 |
T |
|
| Q |
225 |
ccacattagttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttacgaacatggtttgagttttgtagtacttgg |
324 |
Q |
| |
|
||||||| |||||||| | ||||||| ||||||||| || ||| |||||||||||| |||||||||||| |||||| |||| |||| || || | | |
|
|
| T |
30242414 |
ccacattggttttgactacaaagacttgttatcctttgataagaatgctttcaaaaaagttgaatccttgagaacattgtttcagttgagt--tattatg |
30242511 |
T |
|
| Q |
325 |
tcaaaagaaaaacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcatttaa |
424 |
Q |
| |
|
||||| ||||||||||| ||||||||||| |||||||||||||||||||||||| | |||||||||| ||||| |||||| |||||||||||||||| |
|
|
| T |
30242512 |
ccaaaa-aaaaacatgataacttcccaacatacctttctcttcgggttttatgcacatcctttatccggatgccatcactagggagtttaattcatttaa |
30242610 |
T |
|
| Q |
425 |
ggtatttggaacttatttctcttgacatagaaaagttgcctaactcaatttacaaattacaaaaactggaaatcttgaaaataaaaaagtgtgattcact |
524 |
Q |
| |
|
|||||||||||||| |||||||||||| |||| |||||| ||||||||||||| || |||| ||||||||||||||||||||| | ||| | ||| |
|
|
| T |
30242611 |
ggtatttggaacttcgttctcttgacatcaaaaatttgcctgactcaatttacaacctaaaaaagctggaaatcttgaaaataaaacattgtcgtaaact |
30242710 |
T |
|
| Q |
525 |
gagttgtcttccgaaacgcttggtttgtttacaaaatcttagacatatagtcatt |
579 |
Q |
| |
|
||||||||| || |||| ||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
30242711 |
gagttgtctcccaaaacacttggcttgcttacaaaatcttagacatatagtcatt |
30242765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 28 - 582
Target Start/End: Complemental strand, 29872435 - 29871893
Alignment:
| Q |
28 |
gttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattcaaga |
127 |
Q |
| |
|
|||||||||||||| | |||||| ||| | |||||||||||||||||||||||||||||| | || |||||||||| |||||| |||||||| ||||||| |
|
|
| T |
29872435 |
gttgaagatgttggaaacatggtttggaaggaattgtaccaaaaatcattctttcaagatggcaagatggatgaatattctggagacatttctttcaaga |
29872336 |
T |
|
| Q |
128 |
tgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacacca |
227 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||| |
|
|
| T |
29872335 |
tgcatgatcttgtccatgatctcgctcaatcaataatggggcaagaatgtatgcatttggagaacaaaaacatgaccagtttgtcaaaaagcacacacca |
29872236 |
T |
|
| Q |
228 |
cattagttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttacgaacatggtttgagttttgtagtacttggtca |
327 |
Q |
| |
|
|||| | ||||| | |||| ||||||||| || | |||||||||||| |||||||||||| |||||| | ||||||| | | ||| || |
|
|
| T |
29872235 |
cattgttgttgactacaaag---tgttatcctttgatgaaaatgctttcaaaaaagttgaatccttgagaacattg-ttgagttat-tcttac-----ca |
29872146 |
T |
|
| Q |
328 |
aaagaaaaacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcatttaaggt |
427 |
Q |
| |
|
|| ||||||||||| |||||||| || | |||||||| |||||||||||| | |||||||||| ||||| ||| || ||||||||||||||||||| |
|
|
| T |
29872145 |
aa--aaaaacatgataacttcccagcatatctttctctccgggttttatgcgcatcctttatccggatgccatcactggggagtttaattcatttaaggt |
29872048 |
T |
|
| Q |
428 |
atttggaacttatttctcttgacatagaaaagttgcctaactcaatttacaaattacaaaaactggaaatcttgaaaataaaaaagtgtgattcactgag |
527 |
Q |
| |
|
|||||| |||| || |||||||||| ||||||||||| ||||||||||||| || |||| ||||||||||||||||||||| | |||||| ||| || |
|
|
| T |
29872047 |
atttgggacttcgttttcttgacataaaaaagttgcctgactcaatttacaatctaaaaaagctggaaatcttgaaaataaaatactgtgataaacttag |
29871948 |
T |
|
| Q |
528 |
ttgtcttccgaaacgcttggtttgtttacaaaatcttagacatatagtcattgaa |
582 |
Q |
| |
|
|| |||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
29871947 |
ctggcttccgaaacgcttggcttgtttacaaaatcttagacatatagtcattgaa |
29871893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 28 - 582
Target Start/End: Complemental strand, 30436077 - 30435529
Alignment:
| Q |
28 |
gttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattcaaga |
127 |
Q |
| |
|
|||||||||||||| | ||||| ||| | |||||||||||||||||||||||||||||||| || |||||||||| || ||| |||||||| ||||||| |
|
|
| T |
30436077 |
gttgaagatgttggaaaaatggtttggaaggaattgtaccaaaaatcattctttcaagatagcaagatggatgaatattttggagacatttctttcaaga |
30435978 |
T |
|
| Q |
128 |
tgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacacca |
227 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| |||| |||||| ||||||||| |
|
|
| T |
30435977 |
tgcatgatcttgtccatgatctcgctcaatcagtaacggggaaagaatgtatgtatttggagaatgcaaacatgactaatttgacaaaaaacacacacca |
30435878 |
T |
|
| Q |
228 |
cattagttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttacgaacatggtttgagttttgtagtact-tggtc |
326 |
Q |
| |
|
||| |||||| || | || | | |||||| ||||| ||| ||| ||||||| |||||||||||||||||||| |||||| ||| || | | | || |
|
|
| T |
30435877 |
cataagttttaactctgaaaatttgttatcattcgatgagggtgccttcaaaaaagttgaatccttacgaacattgtttga--cttggagaattatattc |
30435780 |
T |
|
| Q |
327 |
aaaagaaaaacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcatttaagg |
426 |
Q |
| |
|
|| ||||||||||| |||||||| |||| |||||||| |||||| ||| | ||| | | | || || | || | |||||||||||||||||| |
|
|
| T |
30435779 |
caa--aaaaacatgatcacttcccattaaacagctctcttcgagttttaagcacatcctctctacaaggccc---agtatggagtttaattcatttaagg |
30435685 |
T |
|
| Q |
427 |
tatttggaacttatttctcttgacatagaaaagttgcctaactcaatttacaaattacaaaaactggaaatcttgaaaataaaaaagtgtgattcactga |
526 |
Q |
| |
|
|||||||||||| ||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||| | ||||| |
|
|
| T |
30435684 |
tatttggaactttgttctcttgatataaaaaagttgcctaactcaatttacaacttacaaaaactggaaatcttgaaaataaaatattgtcgtgaactga |
30435585 |
T |
|
| Q |
527 |
gttgtcttccgaaacgcttggtttgtttacaaaatcttagacatatagtcattgaa |
582 |
Q |
| |
|
||||||| || |||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
30435584 |
gttgtctcccaaaacgcttggtttgcttacaaaatcttagacatatagtcattgaa |
30435529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 19 - 579
Target Start/End: Complemental strand, 30206792 - 30206235
Alignment:
| Q |
19 |
aatacggaggttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacattt |
118 |
Q |
| |
|
|||| |||||||||||||||||||| |||||| ||| ||||||||| ||||||||| ||||||||||| | || ||||| | |||||| ||||||| |
|
|
| T |
30206792 |
aatatggaggttgaagatgttggcagcatggtttggaatgaattgtgccaaaaatctttctttcaagacatcaagatggacaacggttctggagacattt |
30206693 |
T |
|
| Q |
119 |
cattcaagatgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaag |
218 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||| |||||||||||| |
|
|
| T |
30206692 |
ctttcaagatgcatgatcttgtccatgatcttgctcaatcagtaatgggtcaagaatgtatgtatttggagaattcaaacatgactactttgtcaaaaag |
30206593 |
T |
|
| Q |
219 |
cacacaccacattagttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttacgaacatggtttgagttttgtagt |
318 |
Q |
| |
|
|||||||||||| |||||| || || | ||| |||||| |||||| ||| ||| |||| | |||||||||||| |||||| |||| |||| | | |
|
|
| T |
30206592 |
cacacaccacataagttttcactatgatgacgtgttatcattcgacgagggtgccttcaggaaagttgaatccttgagaacattgtttcagttg---aat |
30206496 |
T |
|
| Q |
319 |
acttggtcaaaagaaaaacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattc |
418 |
Q |
| |
|
|| | ||| |||||||||||||| |||||||||| ||| |||||||||||||||| | ||||||||| | |||| |||||| |||||||||| |
|
|
| T |
30206495 |
cattacaccaaaacaaaacatgattactcgccaacaaaccgttcccttcgggttttatgcacatcctttatccaggtaccatcactagggagtttaattc |
30206396 |
T |
|
| Q |
419 |
atttaaggtatttggaacttatttctcttgacatagaaaagttgcctaactcaatttacaaattacaaaaactggaaatcttgaaaataaaaaagtgtga |
518 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||| ||| |||||| ||||||||||||| |||||||||||||||||||||||||||||| | ||| | |
|
|
| T |
30206395 |
atttaaggtatttggaacttcgttctcttgaaataaaaatgttgccggactcaatttacaacttacaaaaactggaaatcttgaaaataaaagattgtca |
30206296 |
T |
|
| Q |
519 |
ttcactgagttgtcttccgaaacgcttggtttgtttacaaaatcttagacatatagtcatt |
579 |
Q |
| |
|
||| || |||||||||||| |||||| ||||||||| ||||| |||||| | |||||| |
|
|
| T |
30206295 |
aaaacttagctgtcttccgaaaggcttggcttgtttacagaatctcagacatcttgtcatt |
30206235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 28 - 582
Target Start/End: Original strand, 30713270 - 30713818
Alignment:
| Q |
28 |
gttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattcaaga |
127 |
Q |
| |
|
|||||||||||||| | |||||| ||| | ||||||||||||||||||||||| |||||| | || |||||||||| |||||| ||||||| || || | |
|
|
| T |
30713270 |
gttgaagatgttggaaacatggtttggaaggaattgtaccaaaaatcattcttccaagattgcaagatggatgaatattctggaaacatttcttttaaaa |
30713369 |
T |
|
| Q |
128 |
tgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacacca |
227 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |||| |||||||| |||||||||||||||||||| |||||| |||| |||||| ||||||||| |
|
|
| T |
30713370 |
tgcatgatcttgtccatgatctcgctcaatcagtaacggggaaagaatgtgtgtatttggagaatgcaaacatgactaatttgacaaaaaacacacacca |
30713469 |
T |
|
| Q |
228 |
cattagttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttacgaacatggtttgagttttgtagtacttggtca |
327 |
Q |
| |
|
||| |||||| || | || | | |||||| ||||| ||| ||| ||||||| |||||||||||||||||||| |||||| ||| || | | | |
|
|
| T |
30713470 |
cataagttttcactctgaaaaattgttatcattcgatgagggtgccttcaaaaaagttgaatccttacgaacattgtttga--cttggagaattatattg |
30713567 |
T |
|
| Q |
328 |
aaagaaaaacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcatttaaggt |
427 |
Q |
| |
|
|| ||||||||||| |||||||| |||| |||||||| |||||| ||| | ||||| | | | || | || | ||||||||||||||||||| |
|
|
| T |
30713568 |
caa-aaaaacatgatcacttcccattaaacagctctcttcgagttttaagcacatcctttctacaggtccc---agtatggagtttaattcatttaaggt |
30713663 |
T |
|
| Q |
428 |
atttggaacttatttctcttgacatagaaaagttgcctaactcaatttacaaattacaaaaactggaaatcttgaaaataaaaaagtgtgattcactgag |
527 |
Q |
| |
|
|||||||| || |||||||| |||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| | ||| || ||| || |
|
|
| T |
30713664 |
atttggaaattcattctcttggcataaaaaagttgcctgactcaatttacaacttacaaaaactggaaatcttgaaaataaaacactgtaataaacttag |
30713763 |
T |
|
| Q |
528 |
ttgtcttccgaaacgcttggtttgtttacaaaatcttagacatatagtcattgaa |
582 |
Q |
| |
|
||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
30713764 |
ttgccttccgaaacgcttggcttgtttacaaaatcttagacatatagtcattgaa |
30713818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 25 - 308
Target Start/End: Original strand, 30338364 - 30338647
Alignment:
| Q |
25 |
gaggttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattca |
124 |
Q |
| |
|
||||||||||||||||| | |||||| ||| | ||||||||| ||||||| |||||||||||||| || |||||||||| |||||| |||||||| |||| |
|
|
| T |
30338364 |
gaggttgaagatgttggaaacatggtttggaaggaattgtacaaaaaatcgttctttcaagatagcaagatggatgaatattctggagacatttctttca |
30338463 |
T |
|
| Q |
125 |
agatgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacaca |
224 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||||||||| |
|
|
| T |
30338464 |
agatgcatgatcttgtccatgatctcgctcaatcagtaatggggcaagaatgtatgtgtttggagaataaaaacacgactaatttgtcaaaaagcacaca |
30338563 |
T |
|
| Q |
225 |
ccacattagttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttacgaacatggtttga |
308 |
Q |
| |
|
||||||| ||||||||| || ||| ||||||||||| | |||||||||||| |||||||||||| ||||| | |||||| |
|
|
| T |
30338564 |
ccacattggttttgacagcaacaactttttatccttcgatgaaaatgctttcaaaaaagttgaatccttgcgaactttgtttga |
30338647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 25 - 308
Target Start/End: Complemental strand, 30483668 - 30483385
Alignment:
| Q |
25 |
gaggttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattca |
124 |
Q |
| |
|
||||||||||||||||| | |||||| ||| | ||||||||| |||||| |||||||||||||| || |||||||||| |||||| |||||||| |||| |
|
|
| T |
30483668 |
gaggttgaagatgttggaaacatggtttggaaggaattgtacagaaaatcgttctttcaagatagcaagatggatgaatattctggagacatttctttca |
30483569 |
T |
|
| Q |
125 |
agatgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacaca |
224 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||| |||| ||||| |||||||||||||||||| |
|
|
| T |
30483568 |
agatgcatgatcttgtccatgatctcgctcaatcagtaatggggcaagaatgtacgtgtttggagaataaaaacacgactaatttgtcaaaaagcacaca |
30483469 |
T |
|
| Q |
225 |
ccacattagttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttacgaacatggtttga |
308 |
Q |
| |
|
||||||| ||||| ||| || | | ||||||||||| | |||||||||||| |||||||||||| ||||||| |||||| |
|
|
| T |
30483468 |
ccacattggttttaacagcaagaaatttttatccttcgatgaaaatgctttcaaaaaagttgaatccttgcgaacattgtttga |
30483385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 28 - 237
Target Start/End: Complemental strand, 29853572 - 29853363
Alignment:
| Q |
28 |
gttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattcaaga |
127 |
Q |
| |
|
|||||||||||||| | ||||| ||| | |||||||||||||| |||||||||||||||| || |||||||||| ||||| ||||||| ||||||| |
|
|
| T |
29853572 |
gttgaagatgttggaaatatggtttggaaggaattgtaccaaaagtcattctttcaagatatcaagatggatgaatactctggagacatttttttcaaga |
29853473 |
T |
|
| Q |
128 |
tgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacacca |
227 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
29853472 |
tgcatgatcttgtccatgatctcgctcaatcagtaatggggcaagaatgtgtgtatttggagaatgcaaacatgactagtttgacaaaaagcacacacca |
29853373 |
T |
|
| Q |
228 |
cattagtttt |
237 |
Q |
| |
|
||| |||||| |
|
|
| T |
29853372 |
cataagtttt |
29853363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 409 - 582
Target Start/End: Original strand, 30338748 - 30338921
Alignment:
| Q |
409 |
agtttaattcatttaaggtatttggaacttatttctcttgacatagaaaagttgcctaactcaatttacaaattacaaaaactggaaatcttgaaaataa |
508 |
Q |
| |
|
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
30338748 |
agtttaattcatttaaggtatttggaacttacttatcttgacatagaaaagttgcctaactcaatttacaacttacaaaaactggaaatcttgaaaataa |
30338847 |
T |
|
| Q |
509 |
aaaagtgtgattcactgagttgtcttccgaaacgcttggtttgtttacaaaatcttagacatatagtcattgaa |
582 |
Q |
| |
|
|| |||||| ||||||||||||||| |||||||||| ||| |||||||||||||| ||||||||||||||| |
|
|
| T |
30338848 |
aacgttgtgataaactgagttgtcttccaaaacgcttggcttgcttacaaaatcttaggcatatagtcattgaa |
30338921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 409 - 582
Target Start/End: Complemental strand, 30483284 - 30483111
Alignment:
| Q |
409 |
agtttaattcatttaaggtatttggaacttatttctcttgacatagaaaagttgcctaactcaatttacaaattacaaaaactggaaatcttgaaaataa |
508 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
30483284 |
agtttaattcatttaaggtatttggaacttatttatcttgacatagaaaagttgcctaactcaatttacaacttacaaaaactggaaatcttgaaaataa |
30483185 |
T |
|
| Q |
509 |
aaaagtgtgattcactgagttgtcttccgaaacgcttggtttgtttacaaaatcttagacatatagtcattgaa |
582 |
Q |
| |
|
|| | ||| | ||||||||||| || |||||||||| ||| |||||||||||||| ||||||||||||||| |
|
|
| T |
30483184 |
aagactgtcgtaatctgagttgtctcccaaaacgcttggcttgcttacaaaatcttaggcatatagtcattgaa |
30483111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 409 - 579
Target Start/End: Complemental strand, 29853191 - 29853021
Alignment:
| Q |
409 |
agtttaattcatttaaggtatttggaacttatttctcttgacatagaaaagttgcctaactcaatttacaaattacaaaaactggaaatcttgaaaataa |
508 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||| ||| |||||| ||||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
29853191 |
agtttaattcatttaaggtatttggaacttcgttctcttgacataaaaatgttgccggactcaatttacaacttacaaaaactggaaatattgaaaataa |
29853092 |
T |
|
| Q |
509 |
aaaagtgtgattcactgagttgtcttccgaaacgcttggtttgtttacaaaatcttagacatatagtcatt |
579 |
Q |
| |
|
|| | || | | |||||||||||| ||||||| ||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
29853091 |
aagactgcggtgaactgagttgtctcccgaaacacttggcttgcttacaaaatcttagacatatagtcatt |
29853021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 112 - 240
Target Start/End: Original strand, 30331060 - 30331188
Alignment:
| Q |
112 |
gacatttcattcaagatgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgt |
211 |
Q |
| |
|
|||||||| || |||| || ||||||| || ||||||||||||||||| || ||| |||| ||| ||||||| |||||||||||||| ||||||||||| |
|
|
| T |
30331060 |
gacatttctttaaagacgcgtgatcttttcaatgatcttgctcaatcaatactggagcaacaatatatgtatctggagaatgcaaacatgactagtttga |
30331159 |
T |
|
| Q |
212 |
caaaaagcacacaccacattagttttgac |
240 |
Q |
| |
|
|||||||||| || ||||| ||||||||| |
|
|
| T |
30331160 |
caaaaagcacccatcacataagttttgac |
30331188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 24 - 224
Target Start/End: Complemental strand, 17983172 - 17982972
Alignment:
| Q |
24 |
ggaggttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattc |
123 |
Q |
| |
|
|||||||||||||||||||| |||| | ||| ||||||||||||||||||| ||||||||||| | | || ||||| | ||| | | ||||| ||| |
|
|
| T |
17983172 |
ggaggttgaagatgttggcaacatgatttggaatgaattgtaccaaaaatctttctttcaagacatccatattgatgattattcaagtgtgatttctttc |
17983073 |
T |
|
| Q |
124 |
aagatgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacac |
223 |
Q |
| |
|
|| ||||| ||||| |||||||||||||||||||||||| |||||| |||||| || ||| ||||||||| |||||| ||||||||||| |||| |
|
|
| T |
17983072 |
aaaatgcacgatctcgtccatgatcttgctcaatcagtagcggggcatgaatgtgtggttttagagaatgcatctgtgactaacttgtcaaaaagtacac |
17982973 |
T |
|
| Q |
224 |
a |
224 |
Q |
| |
|
| |
|
|
| T |
17982972 |
a |
17982972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 170 - 311
Target Start/End: Original strand, 17418150 - 17418291
Alignment:
| Q |
170 |
aagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacaccacattagttttgacaataaagactcgttatccttcgacaagga |
269 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||| || |||||||||||||||||||||||| ||||| || | | |||||| |||| || | |||| |
|
|
| T |
17418150 |
aagaatgtatgtatttagagaatgcaaacatgattattttgtcaaaaagcacacaccacatatgttttcactctgatgactcgctatcactcaatgagga |
17418249 |
T |
|
| Q |
270 |
tgctttcaaaatagttgaatccttacgaacatggtttgagtt |
311 |
Q |
| |
|
||| ||||||| |||||||||||| ||||||| |||| |||| |
|
|
| T |
17418250 |
tgccttcaaaaaagttgaatccttgcgaacattgtttcagtt |
17418291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 30475598 - 30475472
Alignment:
| Q |
66 |
ccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattcaagatgcatgatcttgtccatgatcttgctcaatcagtaatg |
165 |
Q |
| |
|
||||||||||||||| ||||| | || || ||||| | ||| || |||||| | |||||||||||||| || || |||||||||||||||||||| ||| |
|
|
| T |
30475598 |
ccaaaaatcattcttccaagacatcaagatagatgattattcaggagacattactttcaagatgcatgacctagtgcatgatcttgctcaatcagttatg |
30475499 |
T |
|
| Q |
166 |
gggcaagaatgtatgtatttggagaat |
192 |
Q |
| |
|
||| ||| |||||| |||||||||| |
|
|
| T |
30475498 |
gggtcagagtgtatgattttggagaat |
30475472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 30521556 - 30521601
Alignment:
| Q |
114 |
catttcattcaagatgcatgatcttgtccatgatcttgctcaatca |
159 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
30521556 |
catttctttcaagttgcatgatcttgtccatgatcttgctcaatca |
30521601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 30561896 - 30561941
Alignment:
| Q |
114 |
catttcattcaagatgcatgatcttgtccatgatcttgctcaatca |
159 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
30561896 |
catttctttcaagttgcatgatcttgtccatgatcttgctcaatca |
30561941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 17982671 - 17982610
Alignment:
| Q |
522 |
actgagttgtcttccgaaacgcttgg-tttgtttacaaaatcttagacatatagtcattgaa |
582 |
Q |
| |
|
|||||||||||| |||||||| || ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
17982671 |
actgagttgtctgccgaaacgtctgtctttgtttacaaaatcttagacatttagtcattgaa |
17982610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 15347102 - 15347065
Alignment:
| Q |
121 |
ttcaagatgcatgatcttgtccatgatcttgctcaatc |
158 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
15347102 |
ttcacgatgcatgatcttgttcatgatcttgctcaatc |
15347065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 16396770 - 16396737
Alignment:
| Q |
120 |
attcaagatgcatgatcttgtccatgatcttgct |
153 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |
|
|
| T |
16396770 |
attcaagatgcatgatcttgttcatgatcttgct |
16396737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 17927692 - 17927655
Alignment:
| Q |
121 |
ttcaagatgcatgatcttgtccatgatcttgctcaatc |
158 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
17927692 |
ttcaaaatgcatgatcttgttcatgatcttgctcaatc |
17927655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 15335732 - 15335696
Alignment:
| Q |
121 |
ttcaagatgcatgatcttgtccatgatcttgctcaat |
157 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
15335732 |
ttcaaaatgcatgatcttgttcatgatcttgctcaat |
15335696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 161; Significance: 1e-85; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 28 - 589
Target Start/End: Original strand, 20296427 - 20296994
Alignment:
| Q |
28 |
gttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattcaaga |
127 |
Q |
| |
|
|||||||||||||| | |||||| ||| | ||||||||||||||||||||||||||||| | ||||| ||||||| |||| | || |||| ||||||| |
|
|
| T |
20296427 |
gttgaagatgttggaaacatggtttggaaggaattgtaccaaaaatcattctttcaagaaatcaaaatagatgaatattctagagatatttatttcaaga |
20296526 |
T |
|
| Q |
128 |
tgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacacacca |
227 |
Q |
| |
|
||||||||||||| ||||||| ||| |||||| ||||| |||||||||||||||||||| || |||| | |||| ||||||| |||||||||||| |
|
|
| T |
20296527 |
tgcatgatcttgtttatgatctccttcattcagtagtggggaaagaatgtatgtatttggaggataaaaacgttactaatttgtcacgaagcacacacca |
20296626 |
T |
|
| Q |
228 |
cattagttttgacaataaagactcgttatccttcgacaaggatgctttcaaaatagttgaatccttacgaacatggtttgagtt------ttgtagtact |
321 |
Q |
| |
|
|||| |||||||| | | ||||| ||||||| || |||||| ||| |||||| |||||||||||| ||||||| |||| |||| || | | | |
|
|
| T |
20296627 |
cattggttttgactacacagacttgttatccatcaacaagggtgccttcaaagaagttgaatccttgcgaacattgtttcagttgagtgattatcatcat |
20296726 |
T |
|
| Q |
322 |
tggtcaaaagaaaaacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcatt |
421 |
Q |
| |
|
| || ||| | | ||||||||| |||||||||||||||||||||||||||| ||| | |||||| || | || || ||||| ||||||||||||| |
|
|
| T |
20296727 |
tattccaaaatagatcatgattacatcccaacaaacctttctcttcgggttttgcgcacatcctttacccatgtgcgatcactagagagtttaattcatt |
20296826 |
T |
|
| Q |
422 |
taaggtatttggaacttatttctcttgacatagaaaagttgcctaactcaatttacaaattacaaaaactggaaatcttgaaaataaaaaagtgtgattc |
521 |
Q |
| |
|
||||||||||||| ||| | ||||| |||| || |||||||| ||||||||||||| || |||||| |||||| ||||||||||| | |||||| |
|
|
| T |
20296827 |
taaggtatttggagcttcgtaatcttgtcataaaagagttgcctgactcaatttacaacttgcaaaaattggaaaccttgaaaataatacgctgtgataa |
20296926 |
T |
|
| Q |
522 |
actgagttgtcttccgaaacgcttggtttgtttacaaaatcttagacatatagtcattgaatattgtt |
589 |
Q |
| |
|
||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
20296927 |
tctgagttgtcttccgaaacacttggcctgcctacaaaatcttagacatatagtcattgaagattgtt |
20296994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 56 - 198
Target Start/End: Complemental strand, 52352191 - 52352049
Alignment:
| Q |
56 |
atgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattcaagatgcatgatcttgtccatgatcttgctca |
155 |
Q |
| |
|
|||||||||||||||| |||||||||||||| | || || |||| | || || |||||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
52352191 |
atgaattgtaccaaaagtcattctttcaagacatcaagatcaatgattatttaggagacatttctttcaagatgcatgatcttgtacatgatcttgctca |
52352092 |
T |
|
| Q |
156 |
atcagtaatggggcaagaatgtatgtatttggagaatgcaaac |
198 |
Q |
| |
|
|||| | |||||| ||| |||||| | |||||||| ||||| |
|
|
| T |
52352091 |
atcaattgtggggccagagtgtatgattatggagaatacaaac |
52352049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 13616862 - 13616800
Alignment:
| Q |
24 |
ggaggttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaaga |
86 |
Q |
| |
|
|||||||||||||||||| | |||| | ||| ||||||||||||||||||| || |||||||| |
|
|
| T |
13616862 |
ggaggttgaagatgttggaaacatgatttggaatgaattgtaccaaaaatctttttttcaaga |
13616800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 129; Significance: 2e-66; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 25 - 237
Target Start/End: Complemental strand, 26707599 - 26707387
Alignment:
| Q |
25 |
gaggttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattca |
124 |
Q |
| |
|
||||||||||||||||| | |||||| ||| | ||||||||||||||||||||||||||||| | || |||| ||||| |||||| |||||||| |||| |
|
|
| T |
26707599 |
gaggttgaagatgttggaaacatggtttggaaggaattgtaccaaaaatcattctttcaagactgtaagatgggtgaatattctggagacatttctttca |
26707500 |
T |
|
| Q |
125 |
agatgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacaca |
224 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||| |
|
|
| T |
26707499 |
agatgcatgatcttatccatgatctcgctcaatcagtaatgggacaagaatgcatgtatttggagaatgcaaacatgagtagtttgacaaaaagcacaca |
26707400 |
T |
|
| Q |
225 |
ccacattagtttt |
237 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
26707399 |
ccacataagtttt |
26707387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 402 - 582
Target Start/End: Complemental strand, 26707231 - 26707051
Alignment:
| Q |
402 |
actaggtagtttaattcatttaaggtatttggaacttatttctcttgacatagaaaagttgcctaactcaatttacaaattacaaaaactggaaatcttg |
501 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||| || |||||| ||| ||||||| ||||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
26707231 |
actagggagcttaattcatttaaggtatttggaacttcgttatcttgatataaaaaagtttcctaactcaatttacaacttaaaaaaactggaaatcttg |
26707132 |
T |
|
| Q |
502 |
aaaataaaaaagtgtgattcactgagttgtcttccgaaacgcttggtttgtttacaaaatcttagacatatagtcattgaa |
582 |
Q |
| |
|
||||||||| | |||||| |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
26707131 |
aaaataaaagattgtgataatctgagttgtcttcctaaacacttgacttgtttacaaaatcttagacatatagtcattgaa |
26707051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 94; Significance: 1e-45; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 335 - 588
Target Start/End: Original strand, 25294018 - 25294271
Alignment:
| Q |
335 |
aacatgattacttcccaacaaacctttctcttcgggttttatgcataacctttatccgagagccattactaggtagtttaattcatttaaggtatttgga |
434 |
Q |
| |
|
|||||||| ||||| ||||||||| || |||||| |||||||||| | ||||||||| || |||| | |||| || |||||||||||||||||||||| |
|
|
| T |
25294018 |
aacatgatcacttctcaacaaaccgttgtcttcgagttttatgcacatcctttatccaagtaccatcaataggaagcttaattcatttaaggtatttggc |
25294117 |
T |
|
| Q |
435 |
acttatttctcttgacatagaaaagttgcctaactcaatttacaaattacaaaaactggaaatcttgaaaataaaaaagtgtgattcactgagttgtctt |
534 |
Q |
| |
|
|||| ||||||||||||| ||| |||| || ||||||||||||| ||| ||| |||||||||||| ||||||||| | | |||| ||||||| ||||| |
|
|
| T |
25294118 |
actttattctcttgacataaaaatgttgtctgactcaatttacaacttaaaaatactggaaatcttaaaaataaaatattatgataaactgagtggtctt |
25294217 |
T |
|
| Q |
535 |
ccgaaacgcttggtttgtttacaaaatcttagacatatagtcattgaatattgt |
588 |
Q |
| |
|
|| |||| |||| ||| |||||||||||||||||| || ||||| ||| |||| |
|
|
| T |
25294218 |
ccaaaacatttggcttgcttacaaaatcttagacatctaatcattcaatgttgt |
25294271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 25293765 - 25293828
Alignment:
| Q |
24 |
ggaggttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagat |
87 |
Q |
| |
|
|||||||||||||||||||| |||||| ||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
25293765 |
ggaggttgaagatgttggcagcatggtttggaatgaattgtgccaaaaatcattctttcaagat |
25293828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 8187202 - 8187165
Alignment:
| Q |
121 |
ttcaagatgcatgatcttgtccatgatcttgctcaatc |
158 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
8187202 |
ttcaagatgcatgatcttgtacatgatcttgctcaatc |
8187165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 131 - 159
Target Start/End: Original strand, 25293834 - 25293862
Alignment:
| Q |
131 |
atgatcttgtccatgatcttgctcaatca |
159 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
25293834 |
atgatcttgtccatgatcttgctcaatca |
25293862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 24 - 236
Target Start/End: Complemental strand, 7099686 - 7099474
Alignment:
| Q |
24 |
ggaggttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattc |
123 |
Q |
| |
|
|||||||||||||||||| | |||| | ||| ||||||||||||||||||| ||||||||||| | | |||||||| | ||| | | ||||| ||| |
|
|
| T |
7099686 |
ggaggttgaagatgttggaaacatgatttggaatgaattgtaccaaaaatctttctttcaagacatccatatggatgattattcaagagtgatttctttc |
7099587 |
T |
|
| Q |
124 |
aagatgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacac |
223 |
Q |
| |
|
|| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||| || |||||| | |||||| |||||||||||||||| |
|
|
| T |
7099586 |
aaaatgcatgatctcgtccatgatcttgctcaatcagtaggggggcaagaatgtatggttttagataatgcatatgtgactaacttgtcaaaaagcacac |
7099487 |
T |
|
| Q |
224 |
accacattagttt |
236 |
Q |
| |
|
| || |||||||| |
|
|
| T |
7099486 |
atcatattagttt |
7099474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 24 - 236
Target Start/End: Original strand, 7581560 - 7581772
Alignment:
| Q |
24 |
ggaggttgaagatgttggcatcatggtgtgggatgaattgtaccaaaaatcattctttcaagatagaaaaatggatgaattttctggcgacatttcattc |
123 |
Q |
| |
|
|||||||||||||||||||| |||| | ||| ||||||||| |||||| || ||||||||||| | | |||||||| ||| | |||||||| ||| |
|
|
| T |
7581560 |
ggaggttgaagatgttggcaacatgatttggaatgaattgtgccaaaagtctttctttcaagacattcatatggatgatgattcaagagacatttctttc |
7581659 |
T |
|
| Q |
124 |
aagatgcatgatcttgtccatgatcttgctcaatcagtaatggggcaagaatgtatgtatttggagaatgcaaacttgactagtttgtcaaaaagcacac |
223 |
Q |
| |
|
|| ||||||||||| ||||||||||||||| ||||||| ||| ||||||||||||| ||| ||||||| | ||||| | | ||||||||||||| | |
|
|
| T |
7581660 |
aaaatgcatgatctcatccatgatcttgctcgatcagtagtggtgcaagaatgtatggttttagagaatgaatgtttgacaaatatgtcaaaaagcaccc |
7581759 |
T |
|
| Q |
224 |
accacattagttt |
236 |
Q |
| |
|
| || |||||||| |
|
|
| T |
7581760 |
atcatattagttt |
7581772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 523 - 588
Target Start/End: Original strand, 7582056 - 7582121
Alignment:
| Q |
523 |
ctgagttgtcttccgaaacgcttggtttgtttacaaaatcttagacatatagtcattgaatattgt |
588 |
Q |
| |
|
||||||||||||||| ||| |||| ||| |||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
7582056 |
ctgagttgtcttccggaacacttgtcttgcttacaaaatcttagacatttagtcattgaagattgt |
7582121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 522 - 582
Target Start/End: Complemental strand, 7099191 - 7099131
Alignment:
| Q |
522 |
actgagttgtcttccgaaacgcttggtttgtttacaaaatcttagacatatagtcattgaa |
582 |
Q |
| |
|
||||||||||||||| ||| |||| ||| |||||||||||||||||| || |||||||| |
|
|
| T |
7099191 |
actgagttgtcttccagaacacttgtcttgcttacaaaatcttagacatttaatcattgaa |
7099131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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