View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17965_high_10 (Length: 226)

Name: NF17965_high_10
Description: NF17965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17965_high_10
NF17965_high_10
[»] chr3 (25 HSPs)
chr3 (1-226)||(8471358-8471583)
chr3 (1-226)||(6838908-6839139)
chr3 (1-187)||(5267892-5268078)
chr3 (2-187)||(5298567-5298752)
chr3 (148-225)||(6168714-6168791)
chr3 (139-215)||(6520310-6520386)
chr3 (141-213)||(6591475-6591547)
chr3 (141-213)||(6882339-6882411)
chr3 (141-213)||(7749837-7749909)
chr3 (139-215)||(8569093-8569169)
chr3 (1-72)||(8589677-8589748)
chr3 (147-225)||(6245110-6245188)
chr3 (140-225)||(6259019-6259104)
chr3 (139-215)||(7587680-7587756)
chr3 (2-192)||(6735818-6736008)
chr3 (141-215)||(6947074-6947148)
chr3 (2-215)||(5249977-5250190)
chr3 (1-77)||(4388950-4389026)
chr3 (2-50)||(8568956-8569004)
chr3 (141-225)||(13270681-13270765)
chr3 (141-215)||(6448937-6449011)
chr3 (143-213)||(6722218-6722288)
chr3 (139-213)||(6899923-6899997)
chr3 (2-76)||(6947213-6947287)
chr3 (141-214)||(8454460-8454533)
[»] chr4 (2 HSPs)
chr4 (2-77)||(25242168-25242243)
chr4 (138-215)||(25242280-25242357)
[»] chr7 (1 HSPs)
chr7 (128-225)||(6573432-6573529)
[»] chr1 (1 HSPs)
chr1 (141-225)||(35140494-35140578)


Alignment Details
Target: chr3 (Bit Score: 158; Significance: 3e-84; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 8471583 - 8471358
Alignment:
1 taagtgtggagggttgcctttagctgtaaaaacaatgggcaacctcttgcgtaaaaaattcactcaacatgaatgggaaaagatactagaggctgacatg 100  Q
    ||||||||||||| ||||||||||||| |||||| |||| ||||| ||||| |||||||   ||||||| |||||||| |||||||||||||||||||||    
8471583 taagtgtggagggctgcctttagctgtgaaaacattgggaaaccttttgcggaaaaaatattctcaacacgaatgggataagatactagaggctgacatg 8471484  T
101 tggcggttaactgatgatgatagtaacattaactcgacattgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctcta 200  Q
    ||||||||| |||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
8471483 tggcggttagctgatggtgacagtaacattaactcggcattgagattgagttaccataacctcccttctaatctgaagcgctgttttgcctactgctcta 8471384  T
201 tatttcctaagggttttaagtttgac 226  Q
    ||||||||||||||||| ||||||||    
8471383 tatttcctaagggttttgagtttgac 8471358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 6838908 - 6839139
Alignment:
1 taagtgtggagggttgcctttagctgtaaaaacaatgggcaacctcttgcgtaaaaaattcactcaacatgaatgggaaaagatactagaggctgacatg 100  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||    
6838908 taagtgtggagggttgcctttagctgtgaaaacattggggaacctcttgcggaaaaaattctctaaacatgaatgggaaaagatactagaggctgacatg 6839007  T
101 tggcggttaac------tgatgatgatagtaacattaactcgacattgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctact 194  Q
    ||||| ||| |      ||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||| | | |||| ||||||||||||||||    
6839008 tggcgcttagctgatggtgatggtgatagtaacattaactcggctttgagattgagttaccataacctcccttccagtttgaaacgctgttttgcctact 6839107  T
195 gctctatatttcctaagggttttaagtttgac 226  Q
    | ||| ||||||||| ||||||| ||||||||    
6839108 gttctgtatttcctaggggttttgagtttgac 6839139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 5268078 - 5267892
Alignment:
1 taagtgtggagggttgcctttagctgtaaaaacaatgggcaacctcttgcgtaaaaaattcactcaacatgaatgggaaaagatactagaggctgacatg 100  Q
    ||||||||||||||| |||||||||||||||||  |||| || |||||||| | ||||||| |||||||||||||||  |||||| | ||| | || |||    
5268078 taagtgtggagggttacctttagctgtaaaaactttgggaaatctcttgcgaagaaaattctctcaacatgaatgggttaagatattggagacagatatg 5267979  T
101 tggcggttaactgatgatgatagtaacattaactcgacattgagattgagttaccataacctcccttcgaatctgaagcgctgtttt 187  Q
    ||||| ||| | || | ||| | ||||||||| ||   | ||||||||||||||||| | |||||||| ||||||||||||||||||    
5267978 tggcgtttatcagaaggtgacattaacattaattcagtactgagattgagttaccatcatctcccttccaatctgaagcgctgtttt 5267892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 187
Target Start/End: Complemental strand, 5298752 - 5298567
Alignment:
2 aagtgtggagggttgcctttagctgtaaaaacaatgggcaacctcttgcgtaaaaaattcactcaacatgaatgggaaaagatactagaggctgacatgt 101  Q
    |||||||||||||||||| ||||||||||| || |||| || |||||||| | ||||||| |||||| ||||||||  |||||| | ||| | ||  |||    
5298752 aagtgtggagggttgcctctagctgtaaaagcattggggaatctcttgcgaagaaaattctctcaacgtgaatgggttaagatattggagacagatctgt 5298653  T
102 ggcggttaactgatgatgatagtaacattaactcgacattgagattgagttaccataacctcccttcgaatctgaagcgctgtttt 187  Q
    || | ||| | || | ||| ||||||||||||||    ||||| ||||||| |||| | |||||||| ||||||||||| ||||||    
5298652 ggtgtttatcagagggtgagagtaacattaactcagttttgaggttgagtttccatcatctcccttcaaatctgaagcgttgtttt 5298567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 6168791 - 6168714
Alignment:
148 gagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaagggttttaagtttga 225  Q
    |||||||| |||||||||||| ||||||||||  |||||||| || || ||||||||||| ||||||| |||||||||    
6168791 gagttaccttaacctcccttcaaatctgaagcattgttttgcatattgttctatatttcccaagggttataagtttga 6168714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 6520310 - 6520386
Alignment:
139 attgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaagggtt 215  Q
    ||||||||||||||||||||| |||||||| ||||| ||||| |||||||| || || ||||| ||||| |||||||    
6520310 attgagattgagttaccataatctcccttccaatctaaagcgttgttttgcatattgttctatttttcccaagggtt 6520386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 6591475 - 6591547
Alignment:
141 tgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaaggg 213  Q
    ||||||||||||||| ||||||||| || ||||||||||| |||||||| || || ||||||||||| |||||    
6591475 tgagattgagttaccttaacctcccatccaatctgaagcgttgttttgcttattgttctatatttcccaaggg 6591547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 6882411 - 6882339
Alignment:
141 tgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaaggg 213  Q
    ||||||||||||||| || ||||||||| ||||||||||| |||||||| || || ||||||||||| |||||    
6882411 tgagattgagttaccttatcctcccttccaatctgaagcgttgttttgcttattgttctatatttcccaaggg 6882339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 7749909 - 7749837
Alignment:
141 tgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaaggg 213  Q
    ||||||||| ||||| |||||||||||| ||||||||||| |||||||| || || ||||||||||| |||||    
7749909 tgagattgaattaccttaacctcccttccaatctgaagcgttgttttgcttattgttctatatttccaaaggg 7749837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 8569093 - 8569169
Alignment:
139 attgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaagggtt 215  Q
    ||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || || || ||||| |||||||    
8569093 attgagattgagttaccataatctcccttccaatctcaagcgttgttttgcctattgttcaatttttcccaagggtt 8569169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 8589748 - 8589677
Alignment:
1 taagtgtggagggttgcctttagctgtaaaaacaatgggcaacctcttgcgtaaaaaattcactcaacatga 72  Q
    ||||||||||||||||||||||||||||||| |||||||| | |||||||| | ||| ||  ||||||||||    
8589748 taagtgtggagggttgcctttagctgtaaaatcaatgggccaactcttgcgaagaaatttttctcaacatga 8589677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 6245188 - 6245110
Alignment:
147 tgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaagggttttaagtttga 225  Q
    ||||||||| |||||||||||| ||||||||||  |||||||| || || ||||||||||| ||||||| | |||||||    
6245188 tgagttaccttaacctcccttccaatctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttga 6245110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 225
Target Start/End: Complemental strand, 6259104 - 6259019
Alignment:
140 ttgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaagggttttaagtttga 225  Q
    |||||| ||||||||| || ||||||||| ||||||||||  |||||||| || || ||||||||||| ||||||| | |||||||    
6259104 ttgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcttattgttctatatttcccaagggttatgagtttga 6259019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 7587756 - 7587680
Alignment:
139 attgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaagggtt 215  Q
    ||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||  || || |||||||| |||||||    
7587756 attgagattgagttaccataatctcccatccaatctaaagcgttgttttgccttttgttcaatatttcccaagggtt 7587680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 192
Target Start/End: Complemental strand, 6736008 - 6735818
Alignment:
2 aagtgtggagggttgcctttagctgtaaaaacaatgggcaacctcttgcgtaaaaaattcactcaacatgaatgggaaaagatactagaggctgacatgt 101  Q
    |||||||||||||||||| ||||| ||||| || ||||| | || |||||||||||| |  || |||||||||||   |||||| | ||| |||| ||||    
6736008 aagtgtggagggttgcctctagctataaaatcattgggccaacttttgcgtaaaaaactttctgaacatgaatggattaagatattggagactgatatgt 6735909  T
102 ggcggttaactgatgatgatagtaacattaactcgacattgagattgagttaccataacctcccttcgaatctgaagcgctgttttgccta 192  Q
    |||| ||| | ||||  ||    |||||||||||   | | ||||||||||||||||| ||||| ||  |||| ||||| || ||||||||    
6735908 ggcgtttatcagatggggaccacaacattaactcagtactaagattgagttaccataatctcccatcagatctaaagcgttgctttgccta 6735818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 6947148 - 6947074
Alignment:
141 tgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaagggtt 215  Q
    |||||||||||||||| || || ||||| |||| |||||| ||||||||||| ||||| || ||||| |||||||    
6947148 tgagattgagttaccacaatcttccttccaatcggaagcgttgttttgcctattgctccatttttcccaagggtt 6947074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 5250190 - 5249977
Alignment:
2 aagtgtggagggttgcctttagctgtaaaaacaatgggcaacctcttgcgtaaaaaattcactcaacatgaatgggaaaagatactagaggctgacatgt 101  Q
    ||||||||||||||||| ||||||||||||||  |||| || |||||||| | ||| ||  |||||| ||| ||||  |||||| | ||| | || ||||    
5250190 aagtgtggagggttgccattagctgtaaaaactttgggaaatctcttgcgaagaaagttttctcaacgtgattgggttaagatattggagacagatatgt 5250091  T
102 ggcggttaactgatgatgatagtaacattaactcgacattgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctat 201  Q
    |||| ||| | || |  || ||||||||||| ||   | |||||||||||||||||   |||||||| | ||| ||||| || ||| | || || || ||    
5250090 ggcgtttatcagagggcgagagtaacattaattcagtactgagattgagttaccattgtctcccttctattcttaagcgttgcttttcttattgttccat 5249991  T
202 atttcctaagggtt 215  Q
    ||||||||| ||||    
5249990 atttcctaaaggtt 5249977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4388950 - 4389026
Alignment:
1 taagtgtggagggttgcctttagctgtaaaaacaatgggcaacctcttgcgtaaaaaattcactcaacatgaatggg 77  Q
    |||||||| |||||| || ||||||||||||||  |||| || |||||||| | ||||||| |||||| ||||||||    
4388950 taagtgtgtagggtttccattagctgtaaaaacgttgggaaatctcttgcgaagaaaattctctcaacgtgaatggg 4389026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 8568956 - 8569004
Alignment:
2 aagtgtggagggttgcctttagctgtaaaaacaatgggcaacctcttgc 50  Q
    |||||||||||||||||||||||||| |||||| |||| || |||||||    
8568956 aagtgtggagggttgcctttagctgtgaaaacattggggaatctcttgc 8569004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 13270681 - 13270765
Alignment:
141 tgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaagggttttaagtttga 225  Q
    ||||| ||||||||| || ||| ||||| ||||||||||  |||||||| || || ||||||||||| ||||||| | |||||||    
13270681 tgagaatgagttaccttagcctaccttccaatctgaagcattgttttgcatattgttctatatttcccaagggttatgagtttga 13270765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Original strand, 6448937 - 6449011
Alignment:
141 tgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaagggtt 215  Q
    ||||||||||||||||||| |||||||| | ||| ||| | || |||||||| ||||| || || ||||||||||    
6448937 tgagattgagttaccataatctcccttccagtctaaagtgttgctttgcctattgctccattttccctaagggtt 6449011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 6722218 - 6722288
Alignment:
143 agattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaaggg 213  Q
    |||||||||| |  ||||||||||||  |||||||||| |||||||| || || ||||||||||| |||||    
6722218 agattgagtttctttaacctcccttccgatctgaagcgttgttttgcttattgttctatatttcccaaggg 6722288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 6899997 - 6899923
Alignment:
139 attgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaaggg 213  Q
    ||||| ||||||||||| |||||||||||| ||||||||||  |||||||  || || ||| ||||||| |||||    
6899997 attgaaattgagttaccttaacctcccttccaatctgaagcattgttttgattattgttctttatttccaaaggg 6899923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 6947287 - 6947213
Alignment:
2 aagtgtggagggttgcctttagctgtaaaaacaatgggcaacctcttgcgtaaaaaattcactcaacatgaatgg 76  Q
    |||||||||||||||||||||||| ||||| || ||||| | || ||||| ||||| ||  ||||| ||||||||    
6947287 aagtgtggagggttgcctttagctataaaatcactgggccaacttttgcgaaaaaagttttctcaagatgaatgg 6947213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 8454533 - 8454460
Alignment:
141 tgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaagggt 214  Q
    ||||||||||||||||||| |||||||| ||||| ||||| || ||| |||| || || || ||||| ||||||    
8454533 tgagattgagttaccataatctcccttctaatctaaagcgttgcttttcctattgttccatttttcccaagggt 8454460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 25242168 - 25242243
Alignment:
2 aagtgtggagggttgcctttagctgtaaaaacaatgggcaacctcttgcgtaaaaaattcactcaacatgaatggg 77  Q
    |||||||||| ||||||||||||||||||||||| ||| || |||||||| | ||||||| |||||||||||||||    
25242168 aagtgtggagcgttgcctttagctgtaaaaacaacggggaatctcttgcgaagaaaattctctcaacatgaatggg 25242243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 25242280 - 25242357
Alignment:
138 cattgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaagggtt 215  Q
    |||| ||||||||||||||||| |||||||| ||||||||||| ||||||   ||||| || ||||||||||| ||||    
25242280 cattaagattgagttaccataatctcccttccaatctgaagcgttgttttagttactgttccatatttcctaaaggtt 25242357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 6573432 - 6573529
Alignment:
128 attaactcgacattgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaagggttttaagtttga 225  Q
    |||||||||  ||||||||||||||| ||||| |||||||| ||||| ||||| |||||||| || || || |||||||| ||||||| ||| |||||    
6573432 attaactcggtattgagattgagttatcataatctcccttccaatctaaagcgttgttttgcatattgttccatatttcccaagggttataaatttga 6573529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 225
Target Start/End: Original strand, 35140494 - 35140578
Alignment:
141 tgagattgagttaccataacctcccttcgaatctgaagcgctgttttgcctactgctctatatttcctaagggttttaagtttga 225  Q
    ||||| ||||||||| || ||||||||| ||||||||||  |||||||| || |  ||||||||||| ||||||| | |||||||    
35140494 tgagaatgagttaccttagcctcccttccaatctgaagcattgttttgcatattattctatatttcccaagggttatgagtttga 35140578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University